Rw7G015470

Domain present in ubiquitin-regulatory proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0009394
Physical Location & Seq
Forward (+)
15599957 .. 15606604
6648 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G015470.1

Sequence Viewer

Length: 1815 bp
ATGGCGACGCCTAATCAGGAAGCAATCGACACCTTTATCGGCATCACCGGCGCCACCGCCGCCGCCGCCACGCGAAAGCTCGAGGAGCATGGAGGCAATCTCAATGAAGCTGTGAATGCATATTTCAGTGAAGGAGATAGAAACACATCAGTGAATGTGCATGAGACACCTGTTCTTGTTCAAGATGATTTCATGGACATAGATGATCCGGATCTAGTTGGATCTCATAGAAATCCTCTACCACTTCTAGCTGCAGCCAGAGATATCAATCCATTTTCGTATCTTGAGAACCTTGATAGAAGTGTCTTTGAAAGTAGTACTGATATAACAAACCGTACACCATTTGTTACTCATCCAAGAGAATTGAGGGAAATCCCCATAGAAGTCAAGGATGGCAGTCATTCGTCTGGTCATTCTGACCATGCTCCTAAAATTGATGATGCTACTGGAACAGCAGAGGCATACGGTCCAGGTGTCAGTGGAACGGTTATAGTTGATGATGACGATGATGATGTTGCAGCTGCCCCAACTGTTCGGACAGGCCAAGGGAGCGGACCAAGAGATAACTCTTCAGGTGATGGATCTCATCACCAGACTTTTGCACCCAGTGCTCCTCGATTTGATGATCCTAGCAATGATATTGAAGAACAAATGATTCGAGCTGCTATTGAGGCTTCAAAACGGGAGGTTGAGGCAAACCACTCAAATCACCAATTTGGTGTACCAAATGAGTTTGATGATATTGAGCCTGAGCAAAGACAGTCTCACCTAGAGGATCCTGAACTTGCACATGTAGTTTCATTGTCACTGAAGACAGCAGAGCAAGAGAAAGCATTCCGCGAGCAGGGGGGAAATGTTAGACCCACAGAGATGGGTGCTTCTAAGGAAGCTGAGGTGGAGCTGGCTAAAGTAGCAGCACCAAATGGAAGCTTGGAGGCAGGAAGCTCATCTATCAGAGATGATACTGAAGATGTGGAGGAGCAACCTCTTGTCAGGCACAGGTCCAGGCGCATGCCTCCTGGGTCTGTGGAGTCTTCCAAAGAATTTGGACCTAGTGAGACTAGCACACCTTCAAGTCCTGGAGAGCAGGATATGGGTAATCATCCTAGTCATGTTGGCAGTGCCTTCCCTTCTGACGAGTGGGGAGGCATGTCTTCACAGGAGCATGACGAAGCAGTGATGCTTGAGGCTGCAATGTTTGGTGGAATCCCTGAAGGGTCTGGATATCGCATTCCCTATGCACCTCATCAATTTATGCGACCAGAGAGTCCGTATCCCCTGCCTGTACCTCGTCCCCCATCACCCTCTCTGACGGCACAGCGAATGATACGGGAACAACAGGATGATGAATATCTTGCTTCACTGCAAGCTGACAGAGAAAAGGAACTGAAGGCTATTGAGGAAGCTGAAGCTCGTCGCGAAGCAGAAAGACAAGAAGAGGAAGAATCTCGGAGGAAAGTTGAGGAGGAGCAGGAATTGGAGAGACAATTAGCAGCAAAAGAAGCTACTCTCCCTCAAGAACCAGCATCAGATGATGTGAATGCTGTAACCCTTCTGGTGCGAATGCCAGATGGCAGCCGCCATGGTCGTCGATTTCTTAAGACTGATAAGTTGCAGTTCCAAAATCCACTTGTCCTCAATTCATGCAACTTTTTAGACCTATTAGCCTTTGTTCTACTATTTACAAACAAAAGTACCTTCGAAAGGCTTCCCTTCTTGATAAGAATTATACACACCATCCTAATTGTTCTAGCACTTGGAGTAGTGTGCTCTATGGTGCTAAACTTCTTAGAGATGGTTTACTTTGAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0008150 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UBA_4 UBX

Protein Analysis

604

Amino Acids

66.55

Weight (kDa)

4.66

Isoelectric Point (pI)

52.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_4 PF14555 6 - 47 1.7e-12 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1266
AccB1I GGYRCC 1 cut(s) 50
AccBSI CCGCTC 1 cut(s) 552
AccII CGCG 3 cut(s) 73, 840, 1419
AccIII TCCGGA 1 cut(s) 208
AciI CCGC 7 cut(s) 57, 60, 63, 66, 552, 838, 1579
AclWI GGATC 7 cut(s) 200, 219, 229, 589, 620, 770, 783
AcsI RAATTY 1 cut(s) 1043
AcuI CTGAAG 6 cut(s) 555, 830, 987, 1233, 1409, 1428
AcyI GRCGYC 2 cut(s) 8, 51
AdeI CACNNNGTG 1 cut(s) 608
AfaI GTAC 5 cut(s) 319, 337, 723, 1287, 1696
AfiI CCNNNNNNNGG 2 cut(s) 844, 1704
AflII CTTAAG 1 cut(s) 1598
AflIII ACRYGT 1 cut(s) 790
AgsI TTSAA 6 cut(s) 182, 311, 644, 678, 1074, 1808
AjnI CCWGG 4 cut(s) 469, 1004, 1018, 1078
AleI CACNNNNGTG 1 cut(s) 149
Alw21I GWGCWC 2 cut(s) 613, 1772
Alw26I GTCTC 4 cut(s) 158, 768, 1052, 1477
AlwI GGATC 7 cut(s) 200, 219, 229, 589, 620, 770, 783
Ama87I CYCGRG 1 cut(s) 80
Aor13HI TCCGGA 1 cut(s) 208
AoxI GGCC 1 cut(s) 541
ApeKI GCWGC 9 cut(s) 251, 254, 518, 521, 662, 914, 1190, 1493, 1575
ApoI RAATTY 1 cut(s) 1043
Asp700I GAANNNNTTC 2 cut(s) 833, 1707
AspLEI GCGC 2 cut(s) 53, 1011
AspS9I GGNCC 4 cut(s) 467, 554, 1002, 1049
AsuHPI GGTGA 6 cut(s) 37, 581, 587, 701, 758, 1293
AsuII TTCGAA 1 cut(s) 1701
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 4 cut(s) 467, 554, 1002, 1049
BaeI ACNNNNGTAYC 2 cut(s) 1678, 1711
BamHI GGATCC 1 cut(s) 775
BanI GGYRCC 1 cut(s) 50
BbsI GAAGAC 3 cut(s) 818, 1026, 1146
Bbv12I GWGCWC 2 cut(s) 613, 1772
BbvCI CCTCAGC 1 cut(s) 891
BbvI GCAGC 9 cut(s) 238, 266, 508, 530, 649, 926, 1177, 1505, 1587
BccI CCATC 7 cut(s) 386, 572, 865, 1306, 1565, 1745, 1789
BceAI ACGGC 1 cut(s) 1329
BciT130I CCWGG 4 cut(s) 471, 1006, 1020, 1080
BciVI GTATCC 1 cut(s) 1284
BcoDI GTCTC 4 cut(s) 158, 768, 1052, 1477
BfaI CTAG 8 cut(s) 215, 248, 630, 770, 1053, 1062, 1107, 1751
BfmI CTRYAG 1 cut(s) 252
BfoI RGCGCY 1 cut(s) 54
BfrI CTTAAG 1 cut(s) 1598
BfuI GTATCC 1 cut(s) 1284
BmcAI AGTACT 1 cut(s) 319
Bme1390I CCNGG 4 cut(s) 471, 1006, 1020, 1080
Bme18I GGWCC 4 cut(s) 467, 554, 1002, 1049
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 4 cut(s) 467, 554, 1002, 1049
BmiI GGNNCC 2 cut(s) 52, 777
BmrFI CCNGG 4 cut(s) 471, 1006, 1020, 1080
BmrI ACTGGG 1 cut(s) 600
BmsI GCATC 4 cut(s) 51, 430, 1170, 1535
BmuI ACTGGG 1 cut(s) 600
BpiI GAAGAC 3 cut(s) 818, 1026, 1146
BplI GAGNNNNNCTC 2 cut(s) 84, 116
BpmI CTGGAG 1 cut(s) 1101
Bpu10I CCTNAGC 2 cut(s) 750, 891
Bpu14I TTCGAA 1 cut(s) 1701
BpuEI CTTGAG 3 cut(s) 305, 1205, 1500
BsaBI GATNNNNATC 3 cut(s) 210, 267, 1350
BsaHI GRCGYC 2 cut(s) 8, 51
BsaJI CCNNGG 3 cut(s) 544, 1019, 1582
BsaWI WCCGGW 1 cut(s) 208
Bsc4I CCNNNNNNNGG 2 cut(s) 844, 1704
Bse118I RCCGGY 1 cut(s) 47
Bse1I ACTGG 2 cut(s) 451, 606
Bse3DI GCAATG 2 cut(s) 640, 1200
Bse8I GATNNNNATC 3 cut(s) 210, 267, 1350
BseAI TCCGGA 1 cut(s) 208
BseBI CCWGG 4 cut(s) 471, 1006, 1020, 1080
BseDI CCNNGG 3 cut(s) 544, 1019, 1582
BseGI GGATG 5 cut(s) 352, 397, 1102, 1348, 1737
BseJI GATNNNNATC 3 cut(s) 210, 267, 1350
BseLI CCNNNNNNNGG 2 cut(s) 844, 1704
BseMI GCAATG 2 cut(s) 640, 1200
BseMII CTCAG 2 cut(s) 741, 882
BseNI ACTGG 2 cut(s) 451, 606
BseRI GAGGAG 5 cut(s) 98, 603, 992, 1478, 1481
BseXI GCAGC 9 cut(s) 238, 266, 508, 530, 649, 926, 1177, 1505, 1587
Bsh1236I CGCG 3 cut(s) 73, 840, 1419
BshFI GGCC 1 cut(s) 543
BshNI GGYRCC 1 cut(s) 50
BsiHKAI GWGCWC 2 cut(s) 613, 1772
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 2 cut(s) 48, 209
BslFI GGGAC 1 cut(s) 1278
BslI CCNNNNNNNGG 2 cut(s) 844, 1704
BsmAI GTCTC 4 cut(s) 158, 768, 1052, 1477
BsmFI GGGAC 1 cut(s) 1278
BsmI GAATGC 5 cut(s) 121, 833, 1230, 1546, 1569
BsnI GGCC 1 cut(s) 543
BsoBI CYCGRG 1 cut(s) 80
Bsp119I TTCGAA 1 cut(s) 1701
Bsp1286I GDGCHC 2 cut(s) 613, 1772
Bsp13I TCCGGA 1 cut(s) 208
Bsp143I GATC 6 cut(s) 205, 211, 221, 581, 625, 775
Bsp19I CCATGG 1 cut(s) 1582
Bsp68I TCGCGA 1 cut(s) 1419
BspACI CCGC 7 cut(s) 57, 60, 63, 66, 552, 838, 1579
BspANI GGCC 1 cut(s) 543
BspCNI CTCAG 2 cut(s) 742, 883
BspEI TCCGGA 1 cut(s) 208
BspFNI CGCG 3 cut(s) 73, 840, 1419
BspLI GGNNCC 2 cut(s) 52, 777
BspMAI CTGCAG 1 cut(s) 256
BspPI GGATC 7 cut(s) 200, 219, 229, 589, 620, 770, 783
BspT104I TTCGAA 1 cut(s) 1701
BspT107I GGYRCC 1 cut(s) 50
BspTI CTTAAG 1 cut(s) 1598
BsrBI CCGCTC 1 cut(s) 552
BsrDI GCAATG 2 cut(s) 640, 1200
BsrFI RCCGGY 1 cut(s) 47
BsrI ACTGG 2 cut(s) 451, 606
BssAI RCCGGY 1 cut(s) 47
BssECI CCNNGG 3 cut(s) 544, 1019, 1582
BssMI GATC 6 cut(s) 205, 211, 221, 581, 625, 775
BssNI GRCGYC 2 cut(s) 8, 51
BssT1I CCWWGG 2 cut(s) 544, 1582
Bst2UI CCWGG 4 cut(s) 471, 1006, 1020, 1080
Bst4CI ACNGT 5 cut(s) 335, 467, 487, 532, 762
Bst6I CTCTTC 2 cut(s) 574, 1431
BstACI GRCGYC 2 cut(s) 8, 51
BstAFI CTTAAG 1 cut(s) 1598
BstAPI GCANNNNNTGC 1 cut(s) 608
BstBI TTCGAA 1 cut(s) 1701
BstC8I GCNNGC 4 cut(s) 842, 903, 1013, 1368
BstDEI CTNAG 4 cut(s) 750, 882, 891, 1789
BstDSI CCRYGG 1 cut(s) 1582
BstENI CCTNNNNNAGG 1 cut(s) 1702
BstF5I GGATG 5 cut(s) 352, 397, 1102, 1348, 1737
BstFNI CGCG 3 cut(s) 73, 840, 1419
BstH2I RGCGCY 1 cut(s) 54
BstHHI GCGC 2 cut(s) 53, 1011
BstKTI GATC 6 cut(s) 208, 214, 224, 584, 628, 778
BstMAI GTCTC 4 cut(s) 158, 768, 1052, 1477
BstMBI GATC 6 cut(s) 205, 211, 221, 581, 625, 775
BstNI CCWGG 4 cut(s) 471, 1006, 1020, 1080
BstNSI RCATGY 3 cut(s) 794, 1015, 1153
BstSCI CCNGG 4 cut(s) 469, 1004, 1018, 1078
BstSFI CTRYAG 1 cut(s) 252
BstUI CGCG 3 cut(s) 73, 840, 1419
BstV1I GCAGC 9 cut(s) 238, 266, 508, 530, 649, 926, 1177, 1505, 1587
BstV2I GAAGAC 3 cut(s) 818, 1026, 1146
BstX2I RGATCY 4 cut(s) 211, 221, 581, 775
BstXI CCANNNNNNTGG 1 cut(s) 871
BstYI RGATCY 4 cut(s) 211, 221, 581, 775
BsuI GTATCC 1 cut(s) 1284
BsuRI GGCC 1 cut(s) 543
BtgI CCRYGG 1 cut(s) 1582
BtsCI GGATG 5 cut(s) 352, 397, 1102, 1348, 1737
BtsI GCAGTG 3 cut(s) 1126, 1182, 1361
BtsIMutI CAGTG 8 cut(s) 133, 156, 484, 613, 806, 1126, 1182, 1361
BtuMI TCGCGA 1 cut(s) 1419
Cac8I GCNNGC 4 cut(s) 842, 903, 1013, 1368
CfoI GCGC 2 cut(s) 53, 1011
Cfr10I RCCGGY 1 cut(s) 47
Cfr13I GGNCC 4 cut(s) 467, 554, 1002, 1049
CseI GACGC 1 cut(s) 16
Csp6I GTAC 5 cut(s) 318, 336, 722, 1286, 1695
CviQI GTAC 5 cut(s) 318, 336, 722, 1286, 1695
DdeI CTNAG 4 cut(s) 750, 882, 891, 1789
DinI GGCGCC 1 cut(s) 52
DpnI GATC 6 cut(s) 207, 213, 223, 583, 627, 777
DpnII GATC 6 cut(s) 205, 211, 221, 581, 625, 775
DraIII CACNNNGTG 1 cut(s) 608
DrdI GACNNNNNNGTC 1 cut(s) 1266
DseDI GACNNNNNNGTC 1 cut(s) 1266
Eam1104I CTCTTC 2 cut(s) 574, 1431
EarI CTCTTC 2 cut(s) 574, 1431
Eco130I CCWWGG 2 cut(s) 544, 1582
Eco32I GATATC 2 cut(s) 265, 1226
Eco47I GGWCC 4 cut(s) 467, 554, 1002, 1049
Eco57I CTGAAG 6 cut(s) 555, 830, 987, 1233, 1409, 1428
Eco88I CYCGRG 1 cut(s) 80
EcoNI CCTNNNNNAGG 1 cut(s) 1702
EcoRII CCWGG 4 cut(s) 469, 1004, 1018, 1078
EcoRV GATATC 2 cut(s) 265, 1226
EcoT14I CCWWGG 2 cut(s) 544, 1582
EcoT22I ATGCAT 1 cut(s) 121
EgeI GGCGCC 1 cut(s) 52
EheI GGCGCC 1 cut(s) 52
ErhI CCWWGG 2 cut(s) 544, 1582
FaqI GGGAC 1 cut(s) 1278
FokI GGATG 5 cut(s) 339, 404, 1089, 1355, 1724
FspBI CTAG 8 cut(s) 215, 248, 630, 770, 1053, 1062, 1107, 1751
GlaI GCGC 2 cut(s) 52, 1010
GsuI CTGGAG 1 cut(s) 1101
HaeII RGCGCY 1 cut(s) 54
HaeIII GGCC 1 cut(s) 543
HapII CCGG 2 cut(s) 48, 209
HgaI GACGC 1 cut(s) 16
HhaI GCGC 2 cut(s) 53, 1011
Hin1I GRCGYC 2 cut(s) 8, 51
Hin6I GCGC 2 cut(s) 51, 1009
HinP1I GCGC 2 cut(s) 51, 1009
HindIII AAGCTT 1 cut(s) 928
HinfI GANTC 5 cut(s) 655, 1031, 1206, 1267, 1445
HpaII CCGG 2 cut(s) 48, 209
HphI GGTGA 6 cut(s) 37, 581, 587, 701, 758, 1293
Hpy166II GTNNAC 3 cut(s) 338, 722, 1801
Hpy188I TCNGA 7 cut(s) 418, 537, 956, 1135, 1311, 1452, 1531
Hpy188III TCNNGA 9 cut(s) 17, 182, 209, 284, 779, 1221, 1418, 1517, 1717
Hpy8I GTNNAC 3 cut(s) 338, 722, 1801
Hpy99I CGWCG 3 cut(s) 10, 1419, 1593
HpyAV CCTTC 9 cut(s) 125, 1080, 1135, 1140, 1208, 1384, 1562, 1708, 1723
HpyCH4III ACNGT 5 cut(s) 335, 467, 487, 532, 762
HpyF3I CTNAG 4 cut(s) 750, 882, 891, 1789
Hsp92I GRCGYC 2 cut(s) 8, 51
HspAI GCGC 2 cut(s) 51, 1009
KasI GGCGCC 1 cut(s) 50
Kpn2I TCCGGA 1 cut(s) 208
Kzo9I GATC 6 cut(s) 205, 211, 221, 581, 625, 775
LmnI GCTCC 8 cut(s) 85, 430, 549, 616, 898, 979, 1162, 1468
Lsp1109I GCAGC 9 cut(s) 238, 266, 508, 530, 649, 926, 1177, 1505, 1587
LweI GCATC 4 cut(s) 51, 430, 1170, 1535
MaeI CTAG 8 cut(s) 215, 248, 630, 770, 1053, 1062, 1107, 1751
MaeIII GTNAC 3 cut(s) 346, 804, 1546
MalI GATC 6 cut(s) 207, 213, 223, 583, 627, 777
MbiI CCGCTC 1 cut(s) 552
MboI GATC 6 cut(s) 205, 211, 221, 581, 625, 775
MboII GAAGA 8 cut(s) 561, 656, 823, 980, 1026, 1146, 1448, 1454
MflI RGATCY 4 cut(s) 211, 221, 581, 775
MhlI GDGCHC 2 cut(s) 613, 1772
Mly113I GGCGCC 1 cut(s) 51
MlyI GAGTC 2 cut(s) 1040, 1276
MmeI TCCRAC 1 cut(s) 199
Mph1103I ATGCAT 1 cut(s) 121
MroI TCCGGA 1 cut(s) 208
MroXI GAANNNNTTC 2 cut(s) 833, 1707
MseI TTAA 1 cut(s) 1599
MslI CAYNNNNRTG 2 cut(s) 149, 869
MspA1I CMGCKG 1 cut(s) 521
MspCI CTTAAG 1 cut(s) 1598
MspI CCGG 2 cut(s) 48, 209
MspR9I CCNGG 4 cut(s) 471, 1006, 1020, 1080
Mva1269I GAATGC 5 cut(s) 121, 833, 1230, 1546, 1569
MvaI CCWGG 4 cut(s) 471, 1006, 1020, 1080
MvnI CGCG 3 cut(s) 73, 840, 1419
NarI GGCGCC 1 cut(s) 51
NcoI CCATGG 1 cut(s) 1582
NdeII GATC 6 cut(s) 205, 211, 221, 581, 625, 775
NlaIV GGNNCC 2 cut(s) 52, 777
NmuCI GTSAC 1 cut(s) 804
NruI TCGCGA 1 cut(s) 1419
NsiI ATGCAT 1 cut(s) 121
NspI RCATGY 3 cut(s) 794, 1015, 1153
NspV TTCGAA 1 cut(s) 1701
OliI CACNNNNGTG 1 cut(s) 149
PaeI GCATGC 1 cut(s) 1015
PaeR7I CTCGAG 1 cut(s) 80
PciI ACATGT 1 cut(s) 790
PctI GAATGC 5 cut(s) 121, 833, 1230, 1546, 1569
PdmI GAANNNNTTC 2 cut(s) 833, 1707
PfeI GAWTC 3 cut(s) 655, 1206, 1445
PfoI TCCNGGA 1 cut(s) 1078
PleI GAGTC 2 cut(s) 1039, 1275
PluTI GGCGCC 1 cut(s) 54
PpsI GAGTC 2 cut(s) 1039, 1275
PscI ACATGT 1 cut(s) 790
Psp6I CCWGG 4 cut(s) 469, 1004, 1018, 1078
PspGI CCWGG 4 cut(s) 469, 1004, 1018, 1078
PspN4I GGNNCC 2 cut(s) 52, 777
PspPI GGNCC 4 cut(s) 467, 554, 1002, 1049
PspXI VCTCGAGB 1 cut(s) 80
PstI CTGCAG 1 cut(s) 256
PsuI RGATCY 4 cut(s) 211, 221, 581, 775
PvuII CAGCTG 1 cut(s) 521
RruI TCGCGA 1 cut(s) 1419
RsaI GTAC 5 cut(s) 319, 337, 723, 1287, 1696
RsaNI GTAC 5 cut(s) 318, 336, 722, 1286, 1695
RseI CAYNNNNRTG 2 cut(s) 149, 869
SaqAI TTAA 1 cut(s) 1599
Sau3AI GATC 6 cut(s) 205, 211, 221, 581, 625, 775
Sau96I GGNCC 4 cut(s) 467, 554, 1002, 1049
ScaI AGTACT 1 cut(s) 319
SchI GAGTC 2 cut(s) 1040, 1276
ScrFI CCNGG 4 cut(s) 471, 1006, 1020, 1080
SduI GDGCHC 2 cut(s) 613, 1772
SfaNI GCATC 4 cut(s) 51, 430, 1170, 1535
SfcI CTRYAG 1 cut(s) 252
SfoI GGCGCC 1 cut(s) 52
Sfr274I CTCGAG 1 cut(s) 80
SfuI TTCGAA 1 cut(s) 1701
SgrAI CRCCGGYG 1 cut(s) 47
SinI GGWCC 4 cut(s) 467, 554, 1002, 1049
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 2 cut(s) 149, 869
SmlI CTYRAG 5 cut(s) 80, 284, 1184, 1515, 1598
SmoI CTYRAG 5 cut(s) 80, 284, 1184, 1515, 1598
SphI GCATGC 1 cut(s) 1015
SsiI CCGC 7 cut(s) 57, 60, 63, 66, 552, 838, 1579
SspDI GGCGCC 1 cut(s) 50
SspMI CTAG 8 cut(s) 215, 248, 630, 770, 1053, 1062, 1107, 1751
StyD4I CCNGG 4 cut(s) 469, 1004, 1018, 1078
StyI CCWWGG 2 cut(s) 544, 1582
TaaI ACNGT 5 cut(s) 335, 467, 487, 532, 762
TaqI TCGA 6 cut(s) 27, 81, 616, 658, 1591, 1701
TatI WGTACW 1 cut(s) 317
TauI GCSGC 4 cut(s) 62, 65, 68, 1581
TfiI GAWTC 3 cut(s) 655, 1206, 1445
Tru1I TTAA 1 cut(s) 1599
Tru9I TTAA 1 cut(s) 1599
TscAI CASTG 8 cut(s) 133, 156, 484, 613, 813, 1126, 1182, 1368
TseFI GTSAC 1 cut(s) 804
TseI GCWGC 9 cut(s) 251, 254, 518, 521, 662, 914, 1190, 1493, 1575
Tsp45I GTSAC 1 cut(s) 804
TspDTI ATGAA 5 cut(s) 120, 181, 789, 1362, 1632
TspGWI ACGGA 1 cut(s) 1260
TspRI CASTG 8 cut(s) 133, 156, 484, 613, 813, 1126, 1182, 1368
Vha464I CTTAAG 1 cut(s) 1598
VpaK11BI GGWCC 4 cut(s) 467, 554, 1002, 1049
XagI CCTNNNNNAGG 1 cut(s) 1702
XapI RAATTY 1 cut(s) 1043
XceI RCATGY 3 cut(s) 794, 1015, 1153
XhoI CTCGAG 1 cut(s) 80
XmnI GAANNNNTTC 2 cut(s) 833, 1707
XspI CTAG 8 cut(s) 215, 248, 630, 770, 1053, 1062, 1107, 1751
ZrmI AGTACT 1 cut(s) 319
Zsp2I ATGCAT 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.