Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006266.1

Orthogroup ID

OG0009394

Physical Location & Seq

Genomic Coordinates Forward (+)

201052 .. 208975

Gene Structure 7924 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006266.1_g000051.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

atggcgtgtcgacgccctgggtgcggagagctcgacgtcgatggcgtcgagggcggaggtcttgaagccctgggcatcgagagcgagggctttgaggatgtgagcagcgtcatctttgggatcgagggcaatggccttgtcgtctttgtcgagggcttgcttggaaagggaggtggcggaggacttggaggaggcggatctggcttggccttctgctctgggacctcaatctggctgagcggggctcacgagcttcagttcaacaactgcacgagagccaaagaggcccaaatccacgggatcgagacattgatctgcatcccaacttccgacggtgttcttgagatgggttcctccggtttgatcagagagaactgggggttgatccagcaagccaagtcgttgttcgggtcggatcagcctgacccagaaacaagaccgctcgagttcatcaaccggaacttctccatttttgacatcggcatcattgccggcgtgcaggaagaggatcacagctcgtacaatgacgacaagaaacatgtttttggttctagcaagaagaagaacggagctccgaacccaaacccggacctcgcagtttctgattgccaggtgaaaagagcgccgaagaaacggggtcggaaacctgggctgggccgagacacgccgctcaaccacgtggaggcgaagcggcagcggcgggagaagctcacctcgcaagggcggcattggaagcgagggagagatagaaacacatcagtgaatgtgcatgagacacctgttcttgttcaagatgatttcatggacatagatgatccggatctagttggatctcatagaaatcctctaccacttctagctgcagccagagatatcaatccattttcgtatcttgagaaccttgatagaagtgtctttgaaagtagtactgatataacaaaccgtacaccatttgttactcatccaagagaagtgagggaaatccccatagaagtcaaggatggcagtcattcgtctggtcattctgaccatgctcctaaaattgatgatgctactggaacagcagaggcatacggtccaggtgtcagtggaacggttatagttgatgatgacgatgatgatgttgcagctgccccaactgttcggacaggccaagggagcggaccaagagataactcttcaggtgatggatctcatcaccagacttttgcacccagtgctcctcgatttgatgatcctagcaatgatattgaagaacaaatgattcgagctgctattgaggcttcaaaacgggaggttgaggcaaaccactcaaatcaccaatttggtgtaccaaatgagtttgatgatattgagcctgagcaaagacagtctcacctagaggatcctgaacttgcacatgtagtttcattgtcactgaagacagcagagcaagagaaagcattccgcgagcaggggggaaatgttagacccacagagatgggtgcttctaaggaagctgaggtggagctggctaaagtagcagcaccaaatggaagcttggaggcaggaagctcatctatcagagatgatactgaagatgtggaggagcaacctcttgtcaggcacaggtccaggcgcatgcctcctgggtctgtggagtcttccaaagaatttggacctagtgagactagcacaccttcaagtcctggagagcaggatatgggtaatcatcctagtcatgttggcagtgccttcccttctgacgagtggggaggcatgtcttcacaggagcatgacgaagcagtgatgcttgaggctgcaatgtttggtggaatccctgaaggatctggatatcgcattccctatgcacctcatcaatttatgcgaccagagagtccgtatcccctgccagtacctcgtcccccatcaccctctctgacggcacagcgaatgatacgggaacaacaggatgatgaatatcttgcttcactgcaagctgacagagaaaaggaactgaaggctattgaggaagctgaagctcgtcgcgaagcagaaagacaagaagaggaagaatctcggaggaaagttgaggaggagcaggaattggagagacaattagcagcaaaagaagctactctccctcaagaaccagcatcagatgatgtgaatgctgtaacccttctggtgcgaatgccagatggcagccgccatggtcgtcgatttcttaagactgataagttgcagtctcttttcaacttcatagatattggcagaagagtgaaacccggctcttacagagtggtgaggccgttccctaggcgtgctttcagcgatggagacagtgcattgacactgaatgaacttggcctgaccagcaagcaagaagctttgtttttggagttgatatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0008150 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA_4 UBX

Protein Analysis

796

Amino Acids

86.97

Weight (kDa)

4.94

Isoelectric Point (pI)

52.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11740 AT4G11740 AT4G23040
fragaria_vesca	FvH4_5g01560
malus_domestica	MD04G1066700.v1.1 MD06G1073600.v1.1
prunus_persica	Prupe.5G091800_v2.0.a1 Prupe.5G091800_v2.0.a1
pyrus_communis	pycom04g05990 pycom06g07280
rosa_chinensis	RchiOBHm_Chr7g0199121
rosa_laevigata	RLG00000003813
rosa_multiflora	Rmu_sc0006266.1_g000051
rosa_roxburghii	Rroxscaffold_3G00257060
rosa_rugosa	Rorug07G0052800 Rorug07G0052900
rosa_samantha	Rh7AG176300 Rh7BG179800 Rh7CG185400 Rh7DG179300
rosa_wichuraiana	Rw7G015470 Rw7G015500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1875
AatII	GACGTC	1 cut(s)	39
AccBSI	CCGCTC	4 cut(s)	240, 442, 670, 1161
AccI	GTMKAC	1 cut(s)	10
AccII	CGCG	2 cut(s)	1449, 2028
AccIII	TCCGGA	1 cut(s)	817
AcsI	RAATTY	1 cut(s)	1652
AcuI	CTGAAG	7 cut(s)	239, 1164, 1439, 1596, 1842, 2018, 2037
AcvI	CACGTG	1 cut(s)	679
AcyI	GRCGYC	3 cut(s)	13, 36, 45
AdeI	CACNNNGTG	1 cut(s)	1217
AfaI	GTAC	5 cut(s)	521, 928, 946, 1332, 1896
AfiI	CCNNNNNNNGG	7 cut(s)	23, 231, 586, 653, 682, 720, 1453
AflII	CTTAAG	1 cut(s)	2207
AflIII	ACRYGT	2 cut(s)	538, 1399
AgsI	TTSAA	8 cut(s)	65, 262, 791, 920, 1253, 1287, 1683, 2236
AjnI	CCWGG	8 cut(s)	16, 69, 609, 646, 1078, 1613, 1627, 1687
AjuI	GAANNNNNNNTTGG	2 cut(s)	389, 421
AleI	CACNNNNGTG	1 cut(s)	758
Alw21I	GWGCWC	3 cut(s)	33, 574, 1222
Alw26I	GTCTC	8 cut(s)	299, 654, 767, 1377, 1661, 2086, 2232, 2313
AlwNI	CAGNNNCTG	1 cut(s)	602
Ama87I	CYCGRG	1 cut(s)	443
Aor13HI	TCCGGA	1 cut(s)	817
AoxI	GGCC	7 cut(s)	133, 207, 285, 655, 1150, 2288, 2347
ApoI	RAATTY	1 cut(s)	1652
Asp700I	GAANNNNTTC	1 cut(s)	1442
AspA2I	CCTAGG	1 cut(s)	2297
AspLEI	GCGC	2 cut(s)	625, 1620
AspS9I	GGNCC	8 cut(s)	222, 286, 589, 655, 1076, 1163, 1611, 1658
AsuC2I	CCSGG	2 cut(s)	587, 2268
AsuHPI	GGTGA	8 cut(s)	625, 703, 1190, 1196, 1310, 1367, 1902, 2296
AvaI	CYCGRG	1 cut(s)	443
AvaII	GGWCC	6 cut(s)	222, 589, 1076, 1163, 1611, 1658
AvrII	CCTAGG	1 cut(s)	2297
BamHI	GGATCC	1 cut(s)	1384
BanII	GRGCYC	3 cut(s)	33, 247, 574
BauI	CACGAG	2 cut(s)	248, 271
BbrPI	CACGTG	1 cut(s)	679
BbsI	GAAGAC	3 cut(s)	1427, 1635, 1755
Bbv12I	GWGCWC	3 cut(s)	33, 574, 1222
BbvCI	CCTCAGC	1 cut(s)	1500
BccI	CCATC	8 cut(s)	35, 340, 995, 1181, 1474, 1915, 2174, 2309
BceAI	ACGGC	2 cut(s)	1938, 2275
BciT130I	CCWGG	8 cut(s)	18, 71, 611, 648, 1080, 1615, 1629, 1689
BciVI	GTATCC	1 cut(s)	1893
BclI	TGATCA	1 cut(s)	363
BcnI	CCSGG	2 cut(s)	587, 2268
BcoDI	GTCTC	8 cut(s)	299, 654, 767, 1377, 1661, 2086, 2232, 2313
BfaI	CTAG	9 cut(s)	552, 824, 857, 1239, 1379, 1662, 1671, 1716, 2298
BfmI	CTRYAG	1 cut(s)	861
BfoI	RGCGCY	1 cut(s)	626
BfrI	CTTAAG	1 cut(s)	2207
BfuI	GTATCC	1 cut(s)	1893
BglI	GCCNNNNNGGC	1 cut(s)	284
BlnI	CCTAGG	1 cut(s)	2297
BlpI	GCTNAGC	1 cut(s)	236
BmcAI	AGTACT	1 cut(s)	928
Bme18I	GGWCC	6 cut(s)	222, 589, 1076, 1163, 1611, 1658
BmeT110I	CYCGRG	1 cut(s)	443
BmgT120I	GGNCC	8 cut(s)	222, 286, 589, 655, 1076, 1163, 1611, 1658
BmiI	GGNNCC	3 cut(s)	223, 352, 1386
BmrI	ACTGGG	2 cut(s)	385, 1209
BmsI	GCATC	6 cut(s)	84, 327, 492, 1039, 1779, 2144
BmuI	ACTGGG	2 cut(s)	385, 1209
BpiI	GAAGAC	3 cut(s)	1427, 1635, 1755
BplI	GAGNNNNNCTC	2 cut(s)	229, 261
BpmI	CTGGAG	1 cut(s)	1710
Bpu10I	CCTNAGC	2 cut(s)	1359, 1500
Bpu1102I	GCTNAGC	1 cut(s)	236
BpuEI	CTTGAG	4 cut(s)	362, 914, 1814, 2109
BpuMI	CCSGG	2 cut(s)	587, 2268
BsaAI	YACGTR	1 cut(s)	679
BsaBI	GATNNNNATC	4 cut(s)	317, 819, 876, 1959
BsaHI	GRCGYC	3 cut(s)	13, 36, 45
BsaWI	WCCGGW	3 cut(s)	356, 456, 817
Bsc4I	CCNNNNNNNGG	7 cut(s)	23, 231, 586, 653, 682, 720, 1453
Bse118I	RCCGGY	1 cut(s)	491
Bse1I	ACTGG	4 cut(s)	380, 1060, 1215, 1892
Bse3DI	GCAATG	4 cut(s)	136, 486, 1249, 1809
Bse8I	GATNNNNATC	4 cut(s)	317, 819, 876, 1959
BseAI	TCCGGA	1 cut(s)	817
BseBI	CCWGG	8 cut(s)	18, 71, 611, 648, 1080, 1615, 1629, 1689
BseGI	GGATG	6 cut(s)	103, 318, 961, 1006, 1711, 1957
BseJI	GATNNNNATC	4 cut(s)	317, 819, 876, 1959
BseLI	CCNNNNNNNGG	7 cut(s)	23, 231, 586, 653, 682, 720, 1453
BseMI	GCAATG	4 cut(s)	136, 486, 1249, 1809
BseMII	CTCAG	3 cut(s)	227, 1350, 1491
BseNI	ACTGG	4 cut(s)	380, 1060, 1215, 1892
BseRI	GAGGAG	5 cut(s)	204, 1212, 1601, 2087, 2090
BseYI	CCCAGC	1 cut(s)	652
BsgI	GTGCAG	2 cut(s)	253, 518
Bsh1236I	CGCG	2 cut(s)	1449, 2028
BshFI	GGCC	7 cut(s)	135, 209, 287, 657, 1152, 2290, 2349
BsiHKAI	GWGCWC	3 cut(s)	33, 574, 1222
BsiHKCI	CYCGRG	1 cut(s)	443
BsiSI	CCGG	6 cut(s)	357, 457, 492, 587, 818, 2268
BslFI	GGGAC	2 cut(s)	235, 1887
BslI	CCNNNNNNNGG	7 cut(s)	23, 231, 586, 653, 682, 720, 1453
BsmAI	GTCTC	8 cut(s)	299, 654, 767, 1377, 1661, 2086, 2232, 2313
BsmFI	GGGAC	2 cut(s)	235, 1887
BsmI	GAATGC	4 cut(s)	1442, 1839, 2155, 2178
BsnI	GGCC	7 cut(s)	135, 209, 287, 657, 1152, 2290, 2349
BsoBI	CYCGRG	1 cut(s)	443
Bsp1286I	GDGCHC	4 cut(s)	33, 247, 574, 1222
Bsp13I	TCCGGA	1 cut(s)	817
Bsp1720I	GCTNAGC	1 cut(s)	236
Bsp19I	CCATGG	1 cut(s)	2191
Bsp68I	TCGCGA	1 cut(s)	2028
BspANI	GGCC	7 cut(s)	135, 209, 287, 657, 1152, 2290, 2349
BspCNI	CTCAG	3 cut(s)	228, 1351, 1492
BspEI	TCCGGA	1 cut(s)	817
BspFNI	CGCG	2 cut(s)	1449, 2028
BspLI	GGNNCC	3 cut(s)	223, 352, 1386
BspMAI	CTGCAG	1 cut(s)	865
BspTI	CTTAAG	1 cut(s)	2207
BsrBI	CCGCTC	4 cut(s)	240, 442, 670, 1161
BsrDI	GCAATG	4 cut(s)	136, 486, 1249, 1809
BsrFI	RCCGGY	1 cut(s)	491
BsrI	ACTGG	4 cut(s)	380, 1060, 1215, 1892
BssAI	RCCGGY	1 cut(s)	491
BssNI	GRCGYC	3 cut(s)	13, 36, 45
BssSI	CACGAG	2 cut(s)	248, 271
BssT1I	CCWWGG	3 cut(s)	1153, 2191, 2297
Bst2BI	CACGAG	2 cut(s)	248, 271
Bst2UI	CCWGG	8 cut(s)	18, 71, 611, 648, 1080, 1615, 1629, 1689
Bst4CI	ACNGT	7 cut(s)	335, 944, 1076, 1096, 1141, 1371, 2324
Bst6I	CTCTTC	4 cut(s)	498, 1183, 2040, 2251
BstACI	GRCGYC	3 cut(s)	13, 36, 45
BstAFI	CTTAAG	1 cut(s)	2207
BstAPI	GCANNNNNTGC	1 cut(s)	1217
BstBAI	YACGTR	1 cut(s)	679
BstDEI	CTNAG	4 cut(s)	236, 1359, 1491, 1500
BstDSI	CCRYGG	2 cut(s)	295, 2191
BstF5I	GGATG	6 cut(s)	103, 318, 961, 1006, 1711, 1957
BstFNI	CGCG	2 cut(s)	1449, 2028
BstH2I	RGCGCY	1 cut(s)	626
BstHHI	GCGC	2 cut(s)	625, 1620
BstMAI	GTCTC	8 cut(s)	299, 654, 767, 1377, 1661, 2086, 2232, 2313
BstNI	CCWGG	8 cut(s)	18, 71, 611, 648, 1080, 1615, 1629, 1689
BstNSI	RCATGY	4 cut(s)	542, 1403, 1624, 1762
BstSFI	CTRYAG	1 cut(s)	861
BstUI	CGCG	2 cut(s)	1449, 2028
BstV2I	GAAGAC	3 cut(s)	1427, 1635, 1755
BstX2I	RGATCY	6 cut(s)	197, 820, 830, 1190, 1384, 1826
BstXI	CCANNNNNNTGG	1 cut(s)	1480
BstYI	RGATCY	6 cut(s)	197, 820, 830, 1190, 1384, 1826
BsuI	GTATCC	1 cut(s)	1893
BsuRI	GGCC	7 cut(s)	135, 209, 287, 657, 1152, 2290, 2349
BtgI	CCRYGG	2 cut(s)	295, 2191
BtgZI	GCGATG	1 cut(s)	2328
BtsCI	GGATG	6 cut(s)	103, 318, 961, 1006, 1711, 1957
BtsI	GCAGTG	3 cut(s)	1735, 1791, 1970
BtsIMutI	CAGTG	9 cut(s)	765, 1093, 1222, 1415, 1735, 1791, 1970, 2329, 2333
BtuMI	TCGCGA	1 cut(s)	2028
CaiI	CAGNNNCTG	1 cut(s)	602
CfoI	GCGC	2 cut(s)	625, 1620
Cfr10I	RCCGGY	1 cut(s)	491
Cfr13I	GGNCC	8 cut(s)	222, 286, 589, 655, 1076, 1163, 1611, 1658
CseI	GACGC	3 cut(s)	21, 34, 97
Csp6I	GTAC	5 cut(s)	520, 927, 945, 1331, 1895
CviQI	GTAC	5 cut(s)	520, 927, 945, 1331, 1895
DdeI	CTNAG	4 cut(s)	236, 1359, 1491, 1500
DraIII	CACNNNGTG	1 cut(s)	1217
DrdI	GACNNNNNNGTC	1 cut(s)	1875
DseDI	GACNNNNNNGTC	1 cut(s)	1875
Eam1104I	CTCTTC	4 cut(s)	498, 1183, 2040, 2251
EarI	CTCTTC	4 cut(s)	498, 1183, 2040, 2251
EciI	GGCGGA	3 cut(s)	69, 192, 210
Ecl136II	GAGCTC	2 cut(s)	31, 572
Eco130I	CCWWGG	3 cut(s)	1153, 2191, 2297
Eco24I	GRGCYC	3 cut(s)	33, 247, 574
Eco32I	GATATC	2 cut(s)	874, 1835
Eco47I	GGWCC	6 cut(s)	222, 589, 1076, 1163, 1611, 1658
Eco53kI	GAGCTC	2 cut(s)	31, 572
Eco57I	CTGAAG	7 cut(s)	239, 1164, 1439, 1596, 1842, 2018, 2037
Eco72I	CACGTG	1 cut(s)	679
Eco88I	CYCGRG	1 cut(s)	443
EcoICRI	GAGCTC	2 cut(s)	31, 572
EcoO109I	RGGNCCY	1 cut(s)	222
EcoRII	CCWGG	8 cut(s)	16, 69, 609, 646, 1078, 1613, 1627, 1687
EcoRV	GATATC	2 cut(s)	874, 1835
EcoT14I	CCWWGG	3 cut(s)	1153, 2191, 2297
EcoT38I	GRGCYC	3 cut(s)	33, 247, 574
ErhI	CCWWGG	3 cut(s)	1153, 2191, 2297
FaqI	GGGAC	2 cut(s)	235, 1887
FauI	CCCGC	2 cut(s)	233, 693
FbaI	TGATCA	1 cut(s)	363
FblI	GTMKAC	1 cut(s)	10
FokI	GGATG	6 cut(s)	110, 305, 948, 1013, 1698, 1964
FriOI	GRGCYC	3 cut(s)	33, 247, 574
FspBI	CTAG	9 cut(s)	552, 824, 857, 1239, 1379, 1662, 1671, 1716, 2298
GlaI	GCGC	2 cut(s)	624, 1619
GsaI	CCCAGC	1 cut(s)	656
GsuI	CTGGAG	1 cut(s)	1710
HaeII	RGCGCY	1 cut(s)	626
HaeIII	GGCC	7 cut(s)	135, 209, 287, 657, 1152, 2290, 2349
HapII	CCGG	6 cut(s)	357, 457, 492, 587, 818, 2268
HgaI	GACGC	3 cut(s)	21, 34, 97
HhaI	GCGC	2 cut(s)	625, 1620
Hin1I	GRCGYC	3 cut(s)	13, 36, 45
Hin6I	GCGC	2 cut(s)	623, 1618
HinP1I	GCGC	2 cut(s)	623, 1618
HincII	GTYRAC	1 cut(s)	11
HindII	GTYRAC	1 cut(s)	11
HindIII	AAGCTT	2 cut(s)	1537, 2367
HinfI	GANTC	5 cut(s)	1264, 1640, 1815, 1876, 2054
HpaII	CCGG	6 cut(s)	357, 457, 492, 587, 818, 2268
HphI	GGTGA	8 cut(s)	625, 703, 1190, 1196, 1310, 1367, 1902, 2296
Hpy166II	GTNNAC	3 cut(s)	11, 947, 1331
Hpy8I	GTNNAC	3 cut(s)	11, 947, 1331
Hpy99I	CGWCG	7 cut(s)	15, 38, 41, 50, 335, 2028, 2202
HpyAV	CCTTC	7 cut(s)	220, 1689, 1744, 1749, 1817, 1993, 2171
HpyCH4III	ACNGT	7 cut(s)	335, 944, 1076, 1096, 1141, 1371, 2324
HpyCH4IV	ACGT	2 cut(s)	36, 678
HpyF3I	CTNAG	4 cut(s)	236, 1359, 1491, 1500
HpySE526I	ACGT	2 cut(s)	36, 678
Hsp92I	GRCGYC	3 cut(s)	13, 36, 45
HspAI	GCGC	2 cut(s)	623, 1618
Kpn2I	TCCGGA	1 cut(s)	817
KroI	GCCGGC	1 cut(s)	491
KroNI	GCCGGC	1 cut(s)	493
Ksp22I	TGATCA	1 cut(s)	363
LmnI	GCTCC	9 cut(s)	569, 577, 1039, 1158, 1225, 1507, 1588, 1771, 2077
LweI	GCATC	6 cut(s)	84, 327, 492, 1039, 1779, 2144
MaeI	CTAG	9 cut(s)	552, 824, 857, 1239, 1379, 1662, 1671, 1716, 2298
MaeII	ACGT	2 cut(s)	36, 678
MaeIII	GTNAC	3 cut(s)	955, 1413, 2155
MbiI	CCGCTC	4 cut(s)	240, 442, 670, 1161
MflI	RGATCY	6 cut(s)	197, 820, 830, 1190, 1384, 1826
MhlI	GDGCHC	4 cut(s)	33, 247, 574, 1222
MluCI	AATT	6 cut(s)	1041, 1322, 1652, 1859, 2084, 2096
MlyI	GAGTC	2 cut(s)	1649, 1885
MmeI	TCCRAC	4 cut(s)	354, 393, 620, 808
MroI	TCCGGA	1 cut(s)	817
MroNI	GCCGGC	1 cut(s)	491
MroXI	GAANNNNTTC	1 cut(s)	1442
MseI	TTAA	1 cut(s)	2208
MslI	CAYNNNNRTG	2 cut(s)	758, 1478
MspA1I	CMGCKG	2 cut(s)	697, 1130
MspCI	CTTAAG	1 cut(s)	2207
MspI	CCGG	6 cut(s)	357, 457, 492, 587, 818, 2268
Mva1269I	GAATGC	4 cut(s)	1442, 1839, 2155, 2178
MvaI	CCWGG	8 cut(s)	18, 71, 611, 648, 1080, 1615, 1629, 1689
MvnI	CGCG	2 cut(s)	1449, 2028
NaeI	GCCGGC	1 cut(s)	493
NciI	CCSGG	2 cut(s)	587, 2268
NcoI	CCATGG	1 cut(s)	2191
NgoMIV	GCCGGC	1 cut(s)	491
NlaIV	GGNNCC	3 cut(s)	223, 352, 1386
NmeAIII	GCCGAG	1 cut(s)	683
NmuCI	GTSAC	1 cut(s)	1413
NruI	TCGCGA	1 cut(s)	2028
NspI	RCATGY	4 cut(s)	542, 1403, 1624, 1762
OliI	CACNNNNGTG	1 cut(s)	758
PaeI	GCATGC	1 cut(s)	1624
PaeR7I	CTCGAG	1 cut(s)	443
PasI	CCCWGGG	2 cut(s)	17, 70
PciI	ACATGT	2 cut(s)	538, 1399
PcsI	WCGNNNNNNNCGW	3 cut(s)	42, 45, 147
PctI	GAATGC	4 cut(s)	1442, 1839, 2155, 2178
PdiI	GCCGGC	1 cut(s)	493
PdmI	GAANNNNTTC	1 cut(s)	1442
PfeI	GAWTC	3 cut(s)	1264, 1815, 2054
PfoI	TCCNGGA	1 cut(s)	1687
PleI	GAGTC	2 cut(s)	1648, 1884
PmaCI	CACGTG	1 cut(s)	679
PmlI	CACGTG	1 cut(s)	679
PpsI	GAGTC	2 cut(s)	1648, 1884
Ppu21I	YACGTR	1 cut(s)	679
PpuMI	RGGWCCY	1 cut(s)	222
PscI	ACATGT	2 cut(s)	538, 1399
Psp124BI	GAGCTC	2 cut(s)	33, 574
Psp5II	RGGWCCY	1 cut(s)	222
Psp6I	CCWGG	8 cut(s)	16, 69, 609, 646, 1078, 1613, 1627, 1687
PspCI	CACGTG	1 cut(s)	679
PspFI	CCCAGC	1 cut(s)	652
PspGI	CCWGG	8 cut(s)	16, 69, 609, 646, 1078, 1613, 1627, 1687
PspN4I	GGNNCC	3 cut(s)	223, 352, 1386
PspPI	GGNCC	8 cut(s)	222, 286, 589, 655, 1076, 1163, 1611, 1658
PspPPI	RGGWCCY	1 cut(s)	222
PspXI	VCTCGAGB	1 cut(s)	443
PstI	CTGCAG	1 cut(s)	865
PstNI	CAGNNNCTG	1 cut(s)	602
PsuI	RGATCY	6 cut(s)	197, 820, 830, 1190, 1384, 1826
PvuII	CAGCTG	1 cut(s)	1130
RruI	TCGCGA	1 cut(s)	2028
RsaI	GTAC	5 cut(s)	521, 928, 946, 1332, 1896
RsaNI	GTAC	5 cut(s)	520, 927, 945, 1331, 1895
RseI	CAYNNNNRTG	2 cut(s)	758, 1478
SacI	GAGCTC	2 cut(s)	33, 574
SalI	GTCGAC	1 cut(s)	9
SaqAI	TTAA	1 cut(s)	2208
Sau96I	GGNCC	8 cut(s)	222, 286, 589, 655, 1076, 1163, 1611, 1658
ScaI	AGTACT	1 cut(s)	928
SchI	GAGTC	2 cut(s)	1649, 1885
SduI	GDGCHC	4 cut(s)	33, 247, 574, 1222
SfaNI	GCATC	6 cut(s)	84, 327, 492, 1039, 1779, 2144
SfcI	CTRYAG	1 cut(s)	861
Sfr274I	CTCGAG	1 cut(s)	443
SinI	GGWCC	6 cut(s)	222, 589, 1076, 1163, 1611, 1658
SlaI	CTCGAG	1 cut(s)	443
SmiMI	CAYNNNNRTG	2 cut(s)	758, 1478
SmlI	CTYRAG	6 cut(s)	341, 443, 893, 1793, 2124, 2207
SmoI	CTYRAG	6 cut(s)	341, 443, 893, 1793, 2124, 2207
SphI	GCATGC	1 cut(s)	1624
Sse9I	AATT	6 cut(s)	1041, 1322, 1652, 1859, 2084, 2096
SspMI	CTAG	9 cut(s)	552, 824, 857, 1239, 1379, 1662, 1671, 1716, 2298
SstI	GAGCTC	2 cut(s)	33, 574
StyI	CCWWGG	3 cut(s)	1153, 2191, 2297
TaaI	ACNGT	7 cut(s)	335, 944, 1076, 1096, 1141, 1371, 2324
TaiI	ACGT	2 cut(s)	39, 681
TasI	AATT	6 cut(s)	1041, 1322, 1652, 1859, 2084, 2096
TatI	WGTACW	1 cut(s)	926
TauI	GCSGC	5 cut(s)	670, 694, 700, 727, 2190
TfiI	GAWTC	3 cut(s)	1264, 1815, 2054
Tru1I	TTAA	1 cut(s)	2208
Tru9I	TTAA	1 cut(s)	2208
TscAI	CASTG	9 cut(s)	765, 1093, 1222, 1422, 1735, 1791, 1977, 2329, 2340
TseFI	GTSAC	1 cut(s)	1413
Tsp45I	GTSAC	1 cut(s)	1413
TspDTI	ATGAA	6 cut(s)	439, 790, 1398, 1971, 2230, 2355
TspGWI	ACGGA	2 cut(s)	582, 1869
TspRI	CASTG	9 cut(s)	765, 1093, 1222, 1422, 1735, 1791, 1977, 2329, 2340
Vha464I	CTTAAG	1 cut(s)	2207
VpaK11BI	GGWCC	6 cut(s)	222, 589, 1076, 1163, 1611, 1658
XapI	RAATTY	1 cut(s)	1652
XceI	RCATGY	4 cut(s)	542, 1403, 1624, 1762
XhoI	CTCGAG	1 cut(s)	443
XmaJI	CCTAGG	1 cut(s)	2297
XmiI	GTMKAC	1 cut(s)	10
XmnI	GAANNNNTTC	1 cut(s)	1442
XspI	CTAG	9 cut(s)	552, 824, 857, 1239, 1379, 1662, 1671, 1716, 2298
ZraI	GACGTC	1 cut(s)	37
ZrmI	AGTACT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.