Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009394

Physical Location & Seq

Genomic Coordinates Reverse (-)

12075457 .. 12078877

Gene Structure 3421 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G23040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGCGACACCTACTCAGGAAGCTATTGACACCTTCATGACCATCACCGGCTCTTCCAATGCCGTCGCCGTTCGTAAGCTCGAGGAGTATCGTGGGAACCTCAATAGAGCTGTGAATGCATACTTTACTCATGGAGATCAAAATTCATATGATGCAATGGATATAGATGATGGTGTGACTCCAGTCCTCTCTGAAGCTAGAACAACGGACCCGTTCCCGCTTCGTGATCCAAACTTTGGGAGAAGTCTATTTGATAATGATCCTGTTATGTCGCGTCCCCCATTTGTTAGTCATCCAAGGGAGGCCAGGGAGATACCTATAGAGGTTAAAGACAGCAATGGGCCATCAGGTCAATCTAATGATGCTCCTACTATTGAGGATGTGACCGAGACAGCTCAAGCTCACGGTCCAGCTGCCCAAGAGGCGGTCATTATAGATGAAGTAAGTGATGATGATAATCAGTCTGCTCCAACCGGACAAAGTAGGCATGCTGTACCTGTTGGTTCTGCAGAAAATAATATGCAACATTACAATGATATAGAAGAACAAATTATTCGAGCTGCTATTGAGGCCTCCAAAATGGAGACTGGTGATGACGTAACAAAATCTGTCACAGTGCAGTCAGCTGAGCGAGAAGTGTTGCGCAGTGAAGGTTGGAAGGCTTCATCCTCAGAAAGAGAAGCTTCTGAAATGGTTTCTATTCCAGTACAGCAGGGTTCCCGAGCCTCAAATGGAAGATTCGCAGCACCTAGCTCACTGTCTGAGGATGATGATGATGATGATGACGATGACCCTGATTATGTTGAGGAGGAAGAGGAACCCCTTGTTAGCCACAGACCAAGACGTGCGGTTTCTGGATCTCGGAGCTCACTTAATGATGATCTTCCCCGGAGCCCTGAAGCAGAAGATGCAACTATTCATTCACCGGGTGCTGGCAATGGTTTTCCTTCTGAGTGGGGAGGCATTTCTTCTGAGGAACATGATGAAGCTATCATGCTAGAGGCTGCCATGTTTGGTGGCATTTCTGAGAGTGAATATGGTGTTCCTTATGCACATTATCCGCAAAGGACACAGCGTCCACCCTCACCGTCATTGACAGCTCAGAGGTTGATTCGAGAACAGCAGGATGATGAGTATCTTGCATCGCTGGAAGCTGACAGGGTAAAAGCTGAGGCTCGTCGATTGGAGGAAGAAGCTGCTAGAGTGGAAGCTATTGAAGAAGCAAAGAGAAAGGAGGAAGAAGCTCGCAGGAAGGTCGAAGAGGAACAGGAGCTGGAGAGGCAATTAGTTTCAAAGGAAGCATCTCTGCCTCAAGAGCCACCAGCCGGGGAAGAGAACGCCATTACACTTCAAGTCAGGCTGCCAGATGGCACCCGTCATGGCCGCCGGTTCTTTAAATCCGACAAACTCCAATCACTTTTCGACTTTATAGACATCTGTAGAGTTGTGAAGCCCAACACTTATAGGCTGGTAAGGCCATATCCTCGGCGTGCTTTTGGAGATGGAGAATGCTCATCGACTCTAAACGATATCGGTTTAACGAGCAAACAAGAAGCATTGTTCTTGGAGCTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0008150 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA_4 UBX

Protein Analysis

525

Amino Acids

58.13

Weight (kDa)

4.52

Isoelectric Point (pI)

66.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_4	PF14555	6 - 47	2.5e-12	UBA-like domain
UBX	PF00789	444 - 523	1.1e-23	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11740 AT4G11740 AT4G23040
fragaria_vesca	FvH4_5g01560
malus_domestica	MD04G1066700.v1.1 MD06G1073600.v1.1
prunus_persica	Prupe.5G091800_v2.0.a1 Prupe.5G091800_v2.0.a1
pyrus_communis	pycom04g05990 pycom06g07280
rosa_chinensis	RchiOBHm_Chr7g0199121
rosa_laevigata	RLG00000003813
rosa_multiflora	Rmu_sc0006266.1_g000051
rosa_roxburghii	Rroxscaffold_3G00257060
rosa_rugosa	Rorug07G0052800 Rorug07G0052900
rosa_samantha	Rh7AG176300 Rh7BG179800 Rh7CG185400 Rh7DG179300
rosa_wichuraiana	Rw7G015470 Rw7G015500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	644
AccB1I	GGYRCC	1 cut(s)	1370
AccB7I	CCANNNNNTGG	1 cut(s)	236
AccII	CGCG	1 cut(s)	274
AciI	CCGC	5 cut(s)	218, 425, 848, 1061, 1384
AclWI	GGATC	3 cut(s)	221, 254, 865
AcoI	YGGCCR	1 cut(s)	1381
AcsI	RAATTY	1 cut(s)	142
AcuI	CTGAAG	2 cut(s)	213, 918
AdeI	CACNNNGTG	1 cut(s)	929
AfaI	GTAC	2 cut(s)	495, 708
AfiI	CCNNNNNNNGG	4 cut(s)	236, 424, 932, 1325
AgsI	TTSAA	3 cut(s)	1217, 1293, 1352
AhdI	GACNNNNNGTC	1 cut(s)	1074
AjiI	CACGTC	1 cut(s)	845
AjnI	CCWGG	1 cut(s)	305
Alw21I	GWGCWC	1 cut(s)	869
Alw26I	GTCTC	2 cut(s)	383, 578
AlwI	GGATC	3 cut(s)	221, 254, 865
AlwNI	CAGNNNCTG	1 cut(s)	1273
Ama87I	CYCGRG	2 cut(s)	80, 720
AoxI	GGCC	5 cut(s)	303, 341, 570, 1381, 1475
ApeKI	GCWGC	6 cut(s)	413, 560, 743, 1004, 1196, 1360
ApoI	RAATTY	1 cut(s)	142
AspLEI	GCGC	1 cut(s)	645
AspS9I	GGNCC	3 cut(s)	208, 341, 407
AsuC2I	CCSGG	3 cut(s)	889, 927, 1327
AsuHPI	GGTGA	4 cut(s)	37, 602, 915, 1077
AvaI	CYCGRG	2 cut(s)	80, 720
AvaII	GGWCC	2 cut(s)	208, 407
BanI	GGYRCC	1 cut(s)	1370
BanII	GRGCYC	2 cut(s)	869, 896
Bbv12I	GWGCWC	1 cut(s)	869
BbvCI	CCTCAGC	1 cut(s)	1170
BbvI	GCAGC	6 cut(s)	400, 547, 755, 991, 1183, 1347
BccI	CCATC	5 cut(s)	50, 164, 352, 1361, 1496
BceAI	ACGGC	2 cut(s)	47, 53
BcgI	CGANNNNNNTGC	2 cut(s)	1237, 1271
BciT130I	CCWGG	1 cut(s)	307
BcnI	CCSGG	3 cut(s)	889, 927, 1327
BcoDI	GTCTC	2 cut(s)	383, 578
BfaI	CTAG	5 cut(s)	198, 750, 998, 1200, 1576
BfmI	CTRYAG	3 cut(s)	318, 507, 1438
BglI	GCCNNNNNGGC	1 cut(s)	422
BisI	GCNGC	7 cut(s)	414, 561, 744, 1005, 1197, 1361, 1384
BlpI	GCTNAGC	1 cut(s)	627
BlsI	GCNGC	7 cut(s)	415, 562, 745, 1006, 1198, 1362, 1385
Bme1390I	CCNGG	4 cut(s)	307, 889, 927, 1327
Bme18I	GGWCC	2 cut(s)	208, 407
BmeRI	GACNNNNNGTC	1 cut(s)	1074
BmeT110I	CYCGRG	2 cut(s)	80, 720
BmgBI	CACGTC	1 cut(s)	845
BmgT120I	GGNCC	3 cut(s)	208, 341, 407
BmiI	GGNNCC	6 cut(s)	98, 210, 718, 819, 893, 1372
BmrFI	CCNGG	4 cut(s)	307, 889, 927, 1327
BmsI	GCATC	5 cut(s)	142, 352, 898, 1151, 1310
BoxI	GACNNNNGTC	1 cut(s)	182
BpmI	CTGGAG	2 cut(s)	165, 1295
Bpu10I	CCTNAGC	1 cut(s)	1170
Bpu1102I	GCTNAGC	1 cut(s)	627
BpuEI	CTTGAG	2 cut(s)	381, 1296
BpuMI	CCSGG	3 cut(s)	889, 927, 1327
BsaBI	GATNNNNATC	3 cut(s)	258, 456, 1134
BsaJI	CCNNGG	5 cut(s)	296, 306, 887, 1326, 1484
BsaWI	WCCGGW	1 cut(s)	473
Bsc4I	CCNNNNNNNGG	4 cut(s)	236, 424, 932, 1325
Bse118I	RCCGGY	2 cut(s)	47, 1386
Bse1I	ACTGG	3 cut(s)	182, 592, 704
Bse3DI	GCAATG	3 cut(s)	162, 343, 943
Bse8I	GATNNNNATC	3 cut(s)	258, 456, 1134
BseBI	CCWGG	1 cut(s)	307
BseDI	CCNNGG	5 cut(s)	296, 306, 887, 1326, 1484
BseGI	GGATG	5 cut(s)	292, 385, 665, 772, 1132
BseJI	GATNNNNATC	3 cut(s)	258, 456, 1134
BseLI	CCNNNNNNNGG	4 cut(s)	236, 424, 932, 1325
BseMI	GCAATG	3 cut(s)	162, 343, 943
BseMII	CTCAG	9 cut(s)	29, 618, 684, 753, 942, 963, 1017, 1115, 1161
BseNI	ACTGG	3 cut(s)	182, 592, 704
BseRI	GAGGAG	2 cut(s)	98, 821
BseXI	GCAGC	6 cut(s)	400, 547, 755, 991, 1183, 1347
BsgI	GTGCAG	1 cut(s)	638
Bsh1236I	CGCG	1 cut(s)	274
BshFI	GGCC	5 cut(s)	305, 343, 572, 1383, 1477
BshNI	GGYRCC	1 cut(s)	1370
BsiHKAI	GWGCWC	1 cut(s)	869
BsiHKCI	CYCGRG	2 cut(s)	80, 720
BsiSI	CCGG	6 cut(s)	48, 474, 889, 926, 1326, 1387
BslFI	GGGAC	1 cut(s)	261
BslI	CCNNNNNNNGG	4 cut(s)	236, 424, 932, 1325
BsmAI	GTCTC	2 cut(s)	383, 578
BsmFI	GGGAC	1 cut(s)	261
BsmI	GAATGC	2 cut(s)	121, 1514
BsnI	GGCC	5 cut(s)	305, 343, 572, 1383, 1477
BsoBI	CYCGRG	2 cut(s)	80, 720
Bsp1286I	GDGCHC	2 cut(s)	869, 896
Bsp143I	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
Bsp1720I	GCTNAGC	1 cut(s)	627
BspACI	CCGC	5 cut(s)	218, 425, 848, 1061, 1384
BspANI	GGCC	5 cut(s)	305, 343, 572, 1383, 1477
BspCNI	CTCAG	9 cut(s)	28, 619, 683, 754, 943, 964, 1018, 1114, 1162
BspFNI	CGCG	1 cut(s)	274
BspHI	TCATGA	1 cut(s)	36
BspLI	GGNNCC	6 cut(s)	98, 210, 718, 819, 893, 1372
BspMAI	CTGCAG	1 cut(s)	511
BspPI	GGATC	3 cut(s)	221, 254, 865
BspQI	GCTCTTC	1 cut(s)	58
BspT107I	GGYRCC	1 cut(s)	1370
BsrDI	GCAATG	3 cut(s)	162, 343, 943
BsrFI	RCCGGY	2 cut(s)	47, 1386
BsrI	ACTGG	3 cut(s)	182, 592, 704
BssAI	RCCGGY	2 cut(s)	47, 1386
BssECI	CCNNGG	5 cut(s)	296, 306, 887, 1326, 1484
BssMI	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
BssT1I	CCWWGG	1 cut(s)	296
Bst2UI	CCWGG	1 cut(s)	307
Bst4CI	ACNGT	4 cut(s)	407, 616, 759, 1089
Bst6I	CTCTTC	4 cut(s)	58, 807, 1254, 1326
BstAPI	GCANNNNNTGC	1 cut(s)	908
BstC8I	GCNNGC	4 cut(s)	489, 934, 1246, 1491
BstDEI	CTNAG	9 cut(s)	15, 627, 670, 762, 951, 972, 1026, 1101, 1170
BstF5I	GGATG	5 cut(s)	292, 385, 665, 772, 1132
BstFNI	CGCG	1 cut(s)	274
BstHHI	GCGC	1 cut(s)	645
BstKTI	GATC	6 cut(s)	139, 229, 262, 860, 883, 1575
BstMAI	GTCTC	2 cut(s)	383, 578
BstMBI	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
BstMWI	GCNNNNNNNGC	7 cut(s)	116, 422, 569, 908, 1279, 1315, 1474
BstNI	CCWGG	1 cut(s)	307
BstNSI	RCATGY	1 cut(s)	491
BstPAI	GACNNNNGTC	1 cut(s)	182
BstSCI	CCNGG	4 cut(s)	305, 887, 925, 1325
BstSFI	CTRYAG	3 cut(s)	318, 507, 1438
BstUI	CGCG	1 cut(s)	274
BstV1I	GCAGC	6 cut(s)	400, 547, 755, 991, 1183, 1347
BstX2I	RGATCY	1 cut(s)	857
BstYI	RGATCY	1 cut(s)	857
BsuRI	GGCC	5 cut(s)	305, 343, 572, 1383, 1477
BtgZI	GCGATG	1 cut(s)	1128
BtrI	CACGTC	1 cut(s)	845
BtsCI	GGATG	5 cut(s)	292, 385, 665, 772, 1132
BtsI	GCAGTG	1 cut(s)	652
BtsIMutI	CAGTG	3 cut(s)	621, 652, 755
Cac8I	GCNNGC	4 cut(s)	489, 934, 1246, 1491
CaiI	CAGNNNCTG	1 cut(s)	1273
CciI	TCATGA	1 cut(s)	36
CfoI	GCGC	1 cut(s)	645
Cfr10I	RCCGGY	2 cut(s)	47, 1386
Cfr13I	GGNCC	3 cut(s)	208, 341, 407
CseI	GACGC	2 cut(s)	263, 1064
Csp6I	GTAC	2 cut(s)	494, 707
CviAII	CATG	7 cut(s)	37, 131, 488, 980, 994, 1009, 1379
CviQI	GTAC	2 cut(s)	494, 707
DdeI	CTNAG	9 cut(s)	15, 627, 670, 762, 951, 972, 1026, 1101, 1170
DpnI	GATC	6 cut(s)	138, 228, 261, 859, 882, 1574
DpnII	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
DraI	TTTAAA	1 cut(s)	1396
DraIII	CACNNNGTG	1 cut(s)	929
DriI	GACNNNNNGTC	1 cut(s)	1074
EaeI	YGGCCR	1 cut(s)	1381
Eam1104I	CTCTTC	4 cut(s)	58, 807, 1254, 1326
Eam1105I	GACNNNNNGTC	1 cut(s)	1074
EarI	CTCTTC	4 cut(s)	58, 807, 1254, 1326
Ecl136II	GAGCTC	1 cut(s)	867
Eco130I	CCWWGG	1 cut(s)	296
Eco147I	AGGCCT	1 cut(s)	572
Eco24I	GRGCYC	2 cut(s)	869, 896
Eco32I	GATATC	1 cut(s)	1531
Eco47I	GGWCC	2 cut(s)	208, 407
Eco53kI	GAGCTC	1 cut(s)	867
Eco57I	CTGAAG	2 cut(s)	213, 918
Eco88I	CYCGRG	2 cut(s)	80, 720
EcoICRI	GAGCTC	1 cut(s)	867
EcoRII	CCWGG	1 cut(s)	305
EcoRV	GATATC	1 cut(s)	1531
EcoT14I	CCWWGG	1 cut(s)	296
EcoT22I	ATGCAT	1 cut(s)	121
EcoT38I	GRGCYC	2 cut(s)	869, 896
ErhI	CCWWGG	1 cut(s)	296
FaeI	CATG	7 cut(s)	40, 134, 491, 983, 997, 1012, 1382
FalI	AAGNNNNNCTT	2 cut(s)	667, 699
FaqI	GGGAC	1 cut(s)	261
FatI	CATG	7 cut(s)	36, 130, 487, 979, 993, 1008, 1378
FauI	CCCGC	1 cut(s)	225
FauNDI	CATATG	1 cut(s)	148
Fnu4HI	GCNGC	7 cut(s)	414, 561, 744, 1005, 1197, 1361, 1384
FokI	GGATG	5 cut(s)	279, 392, 652, 779, 1139
FriOI	GRGCYC	2 cut(s)	869, 896
Fsp4HI	GCNGC	7 cut(s)	414, 561, 744, 1005, 1197, 1361, 1384
FspBI	CTAG	5 cut(s)	198, 750, 998, 1200, 1576
FspI	TGCGCA	1 cut(s)	644
GlaI	GCGC	1 cut(s)	644
GluI	GCNGC	7 cut(s)	414, 561, 744, 1005, 1197, 1361, 1384
GsuI	CTGGAG	2 cut(s)	165, 1295
HaeIII	GGCC	5 cut(s)	305, 343, 572, 1383, 1477
HapII	CCGG	6 cut(s)	48, 474, 889, 926, 1326, 1387
HgaI	GACGC	2 cut(s)	263, 1064
HhaI	GCGC	1 cut(s)	645
Hin1II	CATG	7 cut(s)	40, 134, 491, 983, 997, 1012, 1382
Hin6I	GCGC	1 cut(s)	643
HinP1I	GCGC	1 cut(s)	643
HindIII	AAGCTT	1 cut(s)	681
HinfI	GANTC	4 cut(s)	178, 738, 1111, 1519
HpaII	CCGG	6 cut(s)	48, 474, 889, 926, 1326, 1387
HphI	GGTGA	4 cut(s)	37, 602, 915, 1077
Hpy166II	GTNNAC	1 cut(s)	1079
Hpy188III	TCNNGA	7 cut(s)	17, 37, 224, 720, 855, 1115, 1313
Hpy8I	GTNNAC	1 cut(s)	1079
Hpy99I	CGWCG	2 cut(s)	68, 1182
HpyAV	CCTTC	5 cut(s)	43, 644, 652, 957, 1246
HpyCH4III	ACNGT	4 cut(s)	407, 616, 759, 1089
HpyCH4IV	ACGT	2 cut(s)	597, 844
HpyCH4V	TGCA	8 cut(s)	119, 155, 509, 523, 619, 911, 1052, 1142
HpyF10VI	GCNNNNNNNGC	7 cut(s)	116, 422, 569, 908, 1279, 1315, 1474
HpyF3I	CTNAG	9 cut(s)	15, 627, 670, 762, 951, 972, 1026, 1101, 1170
HpySE526I	ACGT	2 cut(s)	597, 844
Hsp92II	CATG	7 cut(s)	40, 134, 491, 983, 997, 1012, 1382
HspAI	GCGC	1 cut(s)	643
Kzo9I	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
LguI	GCTCTTC	1 cut(s)	58
LmnI	GCTCC	6 cut(s)	370, 472, 864, 891, 1270, 1567
Lsp1109I	GCAGC	6 cut(s)	400, 547, 755, 991, 1183, 1347
LweI	GCATC	5 cut(s)	142, 352, 898, 1151, 1310
MaeI	CTAG	5 cut(s)	198, 750, 998, 1200, 1576
MaeII	ACGT	2 cut(s)	597, 844
MaeIII	GTNAC	4 cut(s)	175, 382, 598, 610
MalI	GATC	6 cut(s)	138, 228, 261, 859, 882, 1574
MboI	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
MflI	RGATCY	1 cut(s)	857
MhlI	GDGCHC	2 cut(s)	869, 896
MluCI	AATT	3 cut(s)	142, 549, 1283
MlyI	GAGTC	2 cut(s)	172, 1513
MmeI	TCCRAC	3 cut(s)	494, 635, 1425
Mph1103I	ATGCAT	1 cut(s)	121
MseI	TTAA	4 cut(s)	327, 873, 1395, 1538
MslI	CAYNNNNRTG	2 cut(s)	35, 531
MspA1I	CMGCKG	2 cut(s)	413, 626
MspI	CCGG	6 cut(s)	48, 474, 889, 926, 1326, 1387
MspR9I	CCNGG	4 cut(s)	307, 889, 927, 1327
Mva1269I	GAATGC	2 cut(s)	121, 1514
MvaI	CCWGG	1 cut(s)	307
MvnI	CGCG	1 cut(s)	274
MwoI	GCNNNNNNNGC	7 cut(s)	116, 422, 569, 908, 1279, 1315, 1474
NciI	CCSGG	3 cut(s)	889, 927, 1327
NdeI	CATATG	1 cut(s)	148
NdeII	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
NlaIII	CATG	7 cut(s)	40, 134, 491, 983, 997, 1012, 1382
NlaIV	GGNNCC	6 cut(s)	98, 210, 718, 819, 893, 1372
NmeAIII	GCCGAG	1 cut(s)	1465
NmuCI	GTSAC	3 cut(s)	175, 382, 610
NsbI	TGCGCA	1 cut(s)	644
NsiI	ATGCAT	1 cut(s)	121
NspI	RCATGY	1 cut(s)	491
PaeI	GCATGC	1 cut(s)	491
PaeR7I	CTCGAG	1 cut(s)	80
PagI	TCATGA	1 cut(s)	36
PceI	AGGCCT	1 cut(s)	572
PciSI	GCTCTTC	1 cut(s)	58
PctI	GAATGC	2 cut(s)	121, 1514
PfeI	GAWTC	2 cut(s)	738, 1111
PflMI	CCANNNNNTGG	1 cut(s)	236
PkrI	GCNGC	7 cut(s)	415, 562, 745, 1006, 1198, 1362, 1385
PleI	GAGTC	2 cut(s)	172, 1513
PpsI	GAGTC	2 cut(s)	172, 1513
PshAI	GACNNNNGTC	1 cut(s)	182
Psp124BI	GAGCTC	1 cut(s)	869
Psp6I	CCWGG	1 cut(s)	305
PspGI	CCWGG	1 cut(s)	305
PspN4I	GGNNCC	6 cut(s)	98, 210, 718, 819, 893, 1372
PspPI	GGNCC	3 cut(s)	208, 341, 407
PspXI	VCTCGAGB	1 cut(s)	80
PstI	CTGCAG	1 cut(s)	511
PstNI	CAGNNNCTG	1 cut(s)	1273
PsuI	RGATCY	1 cut(s)	857
PvuII	CAGCTG	2 cut(s)	413, 626
RsaI	GTAC	2 cut(s)	495, 708
RsaNI	GTAC	2 cut(s)	494, 707
RseI	CAYNNNNRTG	2 cut(s)	35, 531
SacI	GAGCTC	1 cut(s)	869
SapI	GCTCTTC	1 cut(s)	58
SaqAI	TTAA	4 cut(s)	327, 873, 1395, 1538
SatI	GCNGC	7 cut(s)	414, 561, 744, 1005, 1197, 1361, 1384
Sau3AI	GATC	6 cut(s)	136, 226, 259, 857, 880, 1572
Sau96I	GGNCC	3 cut(s)	208, 341, 407
SchI	GAGTC	2 cut(s)	172, 1513
ScrFI	CCNGG	4 cut(s)	307, 889, 927, 1327
SduI	GDGCHC	2 cut(s)	869, 896
SfaNI	GCATC	5 cut(s)	142, 352, 898, 1151, 1310
SfcI	CTRYAG	3 cut(s)	318, 507, 1438
Sfr274I	CTCGAG	1 cut(s)	80
SinI	GGWCC	2 cut(s)	208, 407
SlaI	CTCGAG	1 cut(s)	80
SmiMI	CAYNNNNRTG	2 cut(s)	35, 531
SmlI	CTYRAG	3 cut(s)	80, 396, 1311
SmoI	CTYRAG	3 cut(s)	80, 396, 1311
SphI	GCATGC	1 cut(s)	491
Sse9I	AATT	3 cut(s)	142, 549, 1283
SseBI	AGGCCT	1 cut(s)	572
SsiI	CCGC	5 cut(s)	218, 425, 848, 1061, 1384
SspMI	CTAG	5 cut(s)	198, 750, 998, 1200, 1576
SstI	GAGCTC	1 cut(s)	869
StuI	AGGCCT	1 cut(s)	572
StyD4I	CCNGG	4 cut(s)	305, 887, 925, 1325
StyI	CCWWGG	1 cut(s)	296
TaaI	ACNGT	4 cut(s)	407, 616, 759, 1089
TaiI	ACGT	2 cut(s)	600, 847
TaqI	TCGA	7 cut(s)	81, 556, 1114, 1180, 1257, 1422, 1517
TaqII	GACCGA	1 cut(s)	401
TasI	AATT	3 cut(s)	142, 549, 1283
TatI	WGTACW	1 cut(s)	706
TauI	GCSGC	1 cut(s)	1386
TfiI	GAWTC	2 cut(s)	738, 1111
Tru1I	TTAA	4 cut(s)	327, 873, 1395, 1538
Tru9I	TTAA	4 cut(s)	327, 873, 1395, 1538
TscAI	CASTG	3 cut(s)	621, 652, 762
TseFI	GTSAC	3 cut(s)	175, 382, 610
TseI	GCWGC	6 cut(s)	413, 560, 743, 1004, 1196, 1360
Tsp45I	GTSAC	3 cut(s)	175, 382, 610
TspDTI	ATGAA	6 cut(s)	25, 135, 453, 654, 908, 999
TspGWI	ACGGA	1 cut(s)	221
TspRI	CASTG	3 cut(s)	621, 652, 762
Van91I	CCANNNNNTGG	1 cut(s)	236
VpaK11BI	GGWCC	2 cut(s)	208, 407
XapI	RAATTY	1 cut(s)	142
XceI	RCATGY	1 cut(s)	491
XhoI	CTCGAG	1 cut(s)	80
XspI	CTAG	5 cut(s)	198, 750, 998, 1200, 1576
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.