Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0009394

Physical Location & Seq

Genomic Coordinates Reverse (-)

953257 .. 957382

Gene Structure 4126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g01560.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCGACTCCCAATCAAGAAGCAATTGATACTTTCATCGGCATCACCGGCGCCACCGCCGCCGCCGCCGCTCGGAAACTCGAGGAGCATGGAGGCAATCTCAACGAAGCTGTGAATGCATATTTCAATGAAGGAGATAGAAACACATCAGTGAATGTACATGAGACACCTGTTCTTGGTCAAGATGATTTCATGGACGTAGATGATCCGGATGTACTCGGATCTCATAGAGATCCTCTACCACTTCTAGCTGCAGCCAGAAATATCAATCCATTATCTTATCTAGAGAACCTTGGTAGAACCGTCTTTGATACTGGTAACGATATAACAAACCGTGCACCATTTGTTACTCATCCAAGAGAAGTGAGGGAAATCCCCATAGAAGTCAAAGATGACATTCATTCATCTGGTCAATCTGGCCATGCTCCTATCATTGATGATGTTACCGGAACAGCCCAAGCATATGGCCCAGGTATCAGTGGAACAGTTATAGTTGATGATGACGATGATGATATTGCAGCTGCCCCAACTGTTGGGAGCGGACCAAGAGATAACTTTTCGGGTGATGGATCTCATCACCGCACTTTTGCACCTAGCGCTCCTCAACTTGTTGATCCTAACAATGATATTGAAGAACAAATGATTCGAGCTGCTATTGAGGCTTCAAAACAGGAAGTTGAGGCTAACCACTCAAATCACCAATTTGGTGTACCCAATGAGTTTGATGACATTGGGCCTCAGCAAAGACAATCTCACCTAGAGGATCCTGAACTTGCCCATGTAGTTTCATTGTCACTGAAGACAGCAGAGCAAGAGAAAGCATTGCGTGAGCATGGGGGAAATGTTAGAATGGCAGAGATGGATGCTTCTGAGGCAGCTGAGGAAGAGCTGGGTAGACTAGCAGAACCAAATGGAAGCTTGGAGGCAGGAAGCTCATCTATCAGAGATGATACTGAAGATGCGGAGGAACAGCCTCTTGTCAGGCACAGGTCCAGGCGCATGCCTCCTGGGTCTGTGGAACCTTCTAAAGAAGTTGGACCTAGTGAGACTAGCACACCTTCTAGTCCTGGAGAGCAGGATACGGGTGATCAGCCTAGTCATGATGGCGGTGCCTTCCCTTCTGATGAGTGGGGAGGCATGTCTTCACAGGAGCATGATGAAGCAGTGATGCTTGAGGCTGCGATGTTTGGTGGAATCCCTGAAGGGTCTGGATATCGCGTCCCCTATGCACCTCATCATTTTATGCGACCAGAGAGTCCGTATCCCCTGCCAGTACCTCGTCCCCCTTCACCCTCTCTGACGGCACATCGCATGATACGGGAACAACAGGATGATGAATACCTTGCATCACTGCAAGCGGACAGAGAAAAGGAACTGAAGGCTATTGAGGAAGCAGAAGCTCGTCGTGAAGCAGAAAGACAAAAAGAGGAGGAATCTCGGAGGAAAGTTGAGGAGGAGCAGGAATTGGAGAGACAATTAGCAGCAAAAGAAGCTAGTCTCCCTCAAGAGCCAGCATCAGATGATGTTAATGCTGTAACCCTTCTGGTGCGAATGCCGGATGGCAGTCGCCATGGTCGTCGATTTCTTAAGACTGATAAGCTGCAGTCTCTTTTCAATTTCATAGATATTGGCAGAAGAGTGAAACCCGGTGCTTACAGAGTGGTGAGGCCGTTCCCTAGGCGTGCTTTCAGTGATGGAGAGTGTGCTTTGACACTGAATGAACTCGGCCTGACCAGCAAGCAAGAAGCTTTGTTTTTGGAGTTGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0008150 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA_4 UBX

Protein Analysis

590

Amino Acids

64.46

Weight (kDa)

4.65

Isoelectric Point (pI)

54.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_4	PF14555	6 - 47	4.4e-12	UBA-like domain
UBX	PF00789	509 - 587	1.4e-18	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11740 AT4G11740 AT4G23040
fragaria_vesca	FvH4_5g01560
malus_domestica	MD04G1066700.v1.1 MD06G1073600.v1.1
prunus_persica	Prupe.5G091800_v2.0.a1 Prupe.5G091800_v2.0.a1
pyrus_communis	pycom04g05990 pycom06g07280
rosa_chinensis	RchiOBHm_Chr7g0199121
rosa_laevigata	RLG00000003813
rosa_multiflora	Rmu_sc0006266.1_g000051
rosa_roxburghii	Rroxscaffold_3G00257060
rosa_rugosa	Rorug07G0052800 Rorug07G0052900
rosa_samantha	Rh7AG176300 Rh7BG179800 Rh7CG185400 Rh7DG179300
rosa_wichuraiana	Rw7G015470 Rw7G015500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1254
AccB1I	GGYRCC	2 cut(s)	50, 1109
AccB7I	CCANNNNNTGG	1 cut(s)	533
AccBSI	CCGCTC	2 cut(s)	71, 540
AccI	GTMKAC	1 cut(s)	895
AccII	CGCG	1 cut(s)	1218
AccIII	TCCGGA	1 cut(s)	208
AclWI	GGATC	7 cut(s)	200, 227, 229, 577, 608, 758, 771
AcoI	YGGCCR	1 cut(s)	418
AcuI	CTGAAG	4 cut(s)	818, 975, 1221, 1397
AcyI	GRCGYC	1 cut(s)	51
AfaI	GTAC	4 cut(s)	159, 216, 711, 1275
AfeI	AGCGCT	1 cut(s)	598
AfiI	CCNNNNNNNGG	3 cut(s)	72, 176, 533
AflII	CTTAAG	1 cut(s)	1586
AgsI	TTSAA	4 cut(s)	127, 632, 666, 1615
AjnI	CCWGG	4 cut(s)	469, 992, 1006, 1066
AleI	CACNNNNGTG	1 cut(s)	149
Alw21I	GWGCWC	1 cut(s)	340
Alw26I	GTCTC	5 cut(s)	158, 1040, 1465, 1502, 1611
Alw44I	GTGCAC	1 cut(s)	336
AlwI	GGATC	7 cut(s)	200, 227, 229, 577, 608, 758, 771
Ama87I	CYCGRG	1 cut(s)	80
Aor13HI	TCCGGA	1 cut(s)	208
Aor51HI	AGCGCT	1 cut(s)	598
AoxI	GGCC	5 cut(s)	418, 466, 734, 1667, 1726
ApaLI	GTGCAC	1 cut(s)	336
ApeKI	GCWGC	9 cut(s)	251, 254, 518, 521, 650, 875, 1178, 1481, 1600
AspA2I	CCTAGG	1 cut(s)	1676
AspLEI	GCGC	3 cut(s)	53, 599, 999
AspS9I	GGNCC	5 cut(s)	467, 542, 734, 990, 1037
AsuC2I	CCSGG	1 cut(s)	1647
AsuHPI	GGTGA	8 cut(s)	37, 569, 575, 689, 746, 1097, 1281, 1675
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	3 cut(s)	542, 990, 1037
AvrII	CCTAGG	1 cut(s)	1676
BaeGI	GKGCMC	1 cut(s)	340
BalI	TGGCCA	1 cut(s)	420
BamHI	GGATCC	1 cut(s)	763
BanI	GGYRCC	2 cut(s)	50, 1109
BbsI	GAAGAC	2 cut(s)	806, 1134
Bbv12I	GWGCWC	1 cut(s)	340
BbvCI	CCTCAGC	2 cut(s)	738, 879
BbvI	GCAGC	9 cut(s)	238, 266, 508, 530, 637, 887, 1165, 1493, 1587
BccI	CCATC	5 cut(s)	560, 853, 1097, 1553, 1688
BceAI	ACGGC	2 cut(s)	1317, 1654
BciT130I	CCWGG	4 cut(s)	471, 994, 1008, 1068
BciVI	GTATCC	2 cut(s)	1072, 1272
BclI	TGATCA	1 cut(s)	1087
BcnI	CCSGG	1 cut(s)	1647
BcoDI	GTCTC	5 cut(s)	158, 1040, 1465, 1502, 1611
BfmI	CTRYAG	2 cut(s)	252, 1601
BfoI	RGCGCY	2 cut(s)	54, 600
BfrI	CTTAAG	1 cut(s)	1586
BfuI	GTATCC	2 cut(s)	1072, 1272
BlnI	CCTAGG	1 cut(s)	1676
Bme1390I	CCNGG	5 cut(s)	471, 994, 1008, 1068, 1647
Bme18I	GGWCC	3 cut(s)	542, 990, 1037
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	5 cut(s)	467, 542, 734, 990, 1037
BmiI	GGNNCC	4 cut(s)	52, 765, 1020, 1111
BmrFI	CCNGG	5 cut(s)	471, 994, 1008, 1068, 1647
BmsI	GCATC	6 cut(s)	51, 853, 949, 1158, 1355, 1523
BpiI	GAAGAC	2 cut(s)	806, 1134
BplI	GAGNNNNNCTC	2 cut(s)	84, 116
BpmI	CTGGAG	1 cut(s)	1089
Bpu10I	CCTNAGC	2 cut(s)	738, 879
BpuEI	CTTGAG	2 cut(s)	1193, 1488
BpuMI	CCSGG	1 cut(s)	1647
BsaHI	GRCGYC	1 cut(s)	51
BsaJI	CCNNGG	5 cut(s)	292, 469, 1007, 1570, 1676
BsaWI	WCCGGW	2 cut(s)	208, 446
Bsc4I	CCNNNNNNNGG	3 cut(s)	72, 176, 533
Bse118I	RCCGGY	1 cut(s)	47
Bse1I	ACTGG	2 cut(s)	319, 1271
Bse3DI	GCAATG	1 cut(s)	821
BseAI	TCCGGA	1 cut(s)	208
BseBI	CCWGG	4 cut(s)	471, 994, 1008, 1068
BseDI	CCNNGG	5 cut(s)	292, 469, 1007, 1570, 1676
BseGI	GGATG	5 cut(s)	217, 352, 868, 1336, 1564
BseLI	CCNNNNNNNGG	3 cut(s)	72, 176, 533
BseMI	GCAATG	1 cut(s)	821
BseMII	CTCAG	3 cut(s)	752, 861, 870
BseNI	ACTGG	2 cut(s)	319, 1271
BseRI	GAGGAG	5 cut(s)	98, 591, 1442, 1466, 1469
BseSI	GKGCMC	1 cut(s)	340
BseXI	GCAGC	9 cut(s)	238, 266, 508, 530, 637, 887, 1165, 1493, 1587
BseYI	CCCAGC	1 cut(s)	889
Bsh1236I	CGCG	1 cut(s)	1218
BshFI	GGCC	5 cut(s)	420, 468, 736, 1669, 1728
BshNI	GGYRCC	2 cut(s)	50, 1109
BsiHKAI	GWGCWC	1 cut(s)	340
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	5 cut(s)	48, 209, 447, 1556, 1647
BslFI	GGGAC	2 cut(s)	1205, 1266
BslI	CCNNNNNNNGG	3 cut(s)	72, 176, 533
BsmAI	GTCTC	5 cut(s)	158, 1040, 1465, 1502, 1611
BsmFI	GGGAC	2 cut(s)	1205, 1266
BsmI	GAATGC	2 cut(s)	121, 1557
BsnI	GGCC	5 cut(s)	420, 468, 736, 1669, 1728
BsoBI	CYCGRG	1 cut(s)	80
Bsp1286I	GDGCHC	1 cut(s)	340
Bsp13I	TCCGGA	1 cut(s)	208
Bsp1407I	TGTACA	1 cut(s)	157
Bsp143I	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
Bsp19I	CCATGG	1 cut(s)	1570
BspANI	GGCC	5 cut(s)	420, 468, 736, 1669, 1728
BspCNI	CTCAG	3 cut(s)	751, 862, 871
BspEI	TCCGGA	1 cut(s)	208
BspFNI	CGCG	1 cut(s)	1218
BspHI	TCATGA	1 cut(s)	1099
BspLI	GGNNCC	4 cut(s)	52, 765, 1020, 1111
BspMAI	CTGCAG	2 cut(s)	256, 1605
BspPI	GGATC	7 cut(s)	200, 227, 229, 577, 608, 758, 771
BspQI	GCTCTTC	1 cut(s)	879
BspT107I	GGYRCC	2 cut(s)	50, 1109
BspTI	CTTAAG	1 cut(s)	1586
BsrBI	CCGCTC	2 cut(s)	71, 540
BsrDI	GCAATG	1 cut(s)	821
BsrFI	RCCGGY	1 cut(s)	47
BsrGI	TGTACA	1 cut(s)	157
BsrI	ACTGG	2 cut(s)	319, 1271
BssAI	RCCGGY	1 cut(s)	47
BssECI	CCNNGG	5 cut(s)	292, 469, 1007, 1570, 1676
BssMI	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
BssNI	GRCGYC	1 cut(s)	51
BssT1I	CCWWGG	3 cut(s)	292, 1570, 1676
Bst2UI	CCWGG	4 cut(s)	471, 994, 1008, 1068
Bst4CI	ACNGT	4 cut(s)	304, 335, 487, 532
Bst6I	CTCTTC	2 cut(s)	879, 1630
BstACI	GRCGYC	1 cut(s)	51
BstAFI	CTTAAG	1 cut(s)	1586
BstAUI	TGTACA	1 cut(s)	157
BstC8I	GCNNGC	5 cut(s)	1001, 1356, 1512, 1683, 1739
BstDEI	CTNAG	3 cut(s)	738, 870, 879
BstDSI	CCRYGG	1 cut(s)	1570
BstF5I	GGATG	5 cut(s)	217, 352, 868, 1336, 1564
BstFNI	CGCG	1 cut(s)	1218
BstH2I	RGCGCY	2 cut(s)	54, 600
BstHHI	GCGC	3 cut(s)	53, 599, 999
BstKTI	GATC	7 cut(s)	208, 224, 235, 572, 616, 766, 1090
BstMAI	GTCTC	5 cut(s)	158, 1040, 1465, 1502, 1611
BstMBI	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
BstNI	CCWGG	4 cut(s)	471, 994, 1008, 1068
BstNSI	RCATGY	2 cut(s)	1003, 1141
BstSCI	CCNGG	5 cut(s)	469, 992, 1006, 1066, 1645
BstSFI	CTRYAG	2 cut(s)	252, 1601
BstSLI	GKGCMC	1 cut(s)	340
BstUI	CGCG	1 cut(s)	1218
BstV1I	GCAGC	9 cut(s)	238, 266, 508, 530, 637, 887, 1165, 1493, 1587
BstV2I	GAAGAC	2 cut(s)	806, 1134
BstX2I	RGATCY	4 cut(s)	221, 232, 569, 763
BstXI	CCANNNNNNTGG	1 cut(s)	464
BstYI	RGATCY	4 cut(s)	221, 232, 569, 763
BsuI	GTATCC	2 cut(s)	1072, 1272
BsuRI	GGCC	5 cut(s)	420, 468, 736, 1669, 1728
BtgI	CCRYGG	1 cut(s)	1570
BtgZI	GCGATG	2 cut(s)	1196, 1292
BtsCI	GGATG	5 cut(s)	217, 352, 868, 1336, 1564
BtsI	GCAGTG	2 cut(s)	1170, 1349
BtsIMutI	CAGTG	7 cut(s)	156, 484, 794, 1170, 1349, 1696, 1712
Cac8I	GCNNGC	5 cut(s)	1001, 1356, 1512, 1683, 1739
CciI	TCATGA	1 cut(s)	1099
CfoI	GCGC	3 cut(s)	53, 599, 999
Cfr10I	RCCGGY	1 cut(s)	47
Cfr13I	GGNCC	5 cut(s)	467, 542, 734, 990, 1037
CseI	GACGC	1 cut(s)	1207
Csp6I	GTAC	4 cut(s)	158, 215, 710, 1274
CviQI	GTAC	4 cut(s)	158, 215, 710, 1274
DdeI	CTNAG	3 cut(s)	738, 870, 879
DinI	GGCGCC	1 cut(s)	52
DpnI	GATC	7 cut(s)	207, 223, 234, 571, 615, 765, 1089
DpnII	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
DrdI	GACNNNNNNGTC	1 cut(s)	1254
DseDI	GACNNNNNNGTC	1 cut(s)	1254
EaeI	YGGCCR	1 cut(s)	418
Eam1104I	CTCTTC	2 cut(s)	879, 1630
EarI	CTCTTC	2 cut(s)	879, 1630
Eco130I	CCWWGG	3 cut(s)	292, 1570, 1676
Eco32I	GATATC	1 cut(s)	1214
Eco47I	GGWCC	3 cut(s)	542, 990, 1037
Eco47III	AGCGCT	1 cut(s)	598
Eco57I	CTGAAG	4 cut(s)	818, 975, 1221, 1397
Eco88I	CYCGRG	1 cut(s)	80
EcoRII	CCWGG	4 cut(s)	469, 992, 1006, 1066
EcoRV	GATATC	1 cut(s)	1214
EcoT14I	CCWWGG	3 cut(s)	292, 1570, 1676
EcoT22I	ATGCAT	1 cut(s)	121
EgeI	GGCGCC	1 cut(s)	52
EheI	GGCGCC	1 cut(s)	52
ErhI	CCWWGG	3 cut(s)	292, 1570, 1676
FaqI	GGGAC	2 cut(s)	1205, 1266
FauNDI	CATATG	1 cut(s)	463
FbaI	TGATCA	1 cut(s)	1087
FblI	GTMKAC	1 cut(s)	895
FokI	GGATG	5 cut(s)	224, 339, 875, 1343, 1571
GlaI	GCGC	3 cut(s)	52, 598, 998
GsaI	CCCAGC	1 cut(s)	893
GsuI	CTGGAG	1 cut(s)	1089
HaeII	RGCGCY	2 cut(s)	54, 600
HaeIII	GGCC	5 cut(s)	420, 468, 736, 1669, 1728
HapII	CCGG	5 cut(s)	48, 209, 447, 1556, 1647
HgaI	GACGC	1 cut(s)	1207
HhaI	GCGC	3 cut(s)	53, 599, 999
Hin1I	GRCGYC	1 cut(s)	51
Hin6I	GCGC	3 cut(s)	51, 597, 997
HinP1I	GCGC	3 cut(s)	51, 597, 997
HindIII	AAGCTT	2 cut(s)	916, 1746
HinfI	GANTC	5 cut(s)	7, 643, 1194, 1255, 1433
HpaII	CCGG	5 cut(s)	48, 209, 447, 1556, 1647
HphI	GGTGA	8 cut(s)	37, 569, 575, 689, 746, 1097, 1281, 1675
Hpy166II	GTNNAC	3 cut(s)	338, 710, 896
Hpy188I	TCNGA	8 cut(s)	75, 221, 871, 944, 1123, 1299, 1440, 1519
Hpy188III	TCNNGA	9 cut(s)	17, 182, 209, 284, 767, 1100, 1209, 1406, 1505
Hpy8I	GTNNAC	3 cut(s)	338, 710, 896
Hpy99I	CGWCG	2 cut(s)	1407, 1581
HpyAV	CCTTC	9 cut(s)	125, 1032, 1068, 1123, 1128, 1196, 1296, 1372, 1550
HpyCH4III	ACNGT	4 cut(s)	304, 335, 487, 532
HpyCH4IV	ACGT	1 cut(s)	198
HpyCH4V	TGCA	9 cut(s)	119, 254, 338, 518, 590, 1229, 1346, 1354, 1603
HpyF3I	CTNAG	3 cut(s)	738, 870, 879
HpySE526I	ACGT	1 cut(s)	198
Hsp92I	GRCGYC	1 cut(s)	51
HspAI	GCGC	3 cut(s)	51, 597, 997
KasI	GGCGCC	1 cut(s)	50
Kpn2I	TCCGGA	1 cut(s)	208
Ksp22I	TGATCA	1 cut(s)	1087
Kzo9I	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
LguI	GCTCTTC	1 cut(s)	879
LmnI	GCTCC	6 cut(s)	85, 430, 537, 604, 1150, 1456
Lsp1109I	GCAGC	9 cut(s)	238, 266, 508, 530, 637, 887, 1165, 1493, 1587
LweI	GCATC	6 cut(s)	51, 853, 949, 1158, 1355, 1523
MaeII	ACGT	1 cut(s)	198
MaeIII	GTNAC	5 cut(s)	317, 346, 442, 792, 1534
MalI	GATC	7 cut(s)	207, 223, 234, 571, 615, 765, 1089
MbiI	CCGCTC	2 cut(s)	71, 540
MboI	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
MboII	GAAGA	6 cut(s)	644, 811, 896, 968, 1134, 1647
MfeI	CAATTG	1 cut(s)	24
MflI	RGATCY	4 cut(s)	221, 232, 569, 763
MhlI	GDGCHC	1 cut(s)	340
MlsI	TGGCCA	1 cut(s)	420
MluCI	AATT	5 cut(s)	24, 701, 1463, 1475, 1615
MluNI	TGGCCA	1 cut(s)	420
Mly113I	GGCGCC	1 cut(s)	51
MlyI	GAGTC	1 cut(s)	1264
MmeI	TCCRAC	1 cut(s)	1015
Mox20I	TGGCCA	1 cut(s)	420
Mph1103I	ATGCAT	1 cut(s)	121
MroI	TCCGGA	1 cut(s)	208
MscI	TGGCCA	1 cut(s)	420
MseI	TTAA	2 cut(s)	1527, 1587
MslI	CAYNNNNRTG	1 cut(s)	149
Msp20I	TGGCCA	1 cut(s)	420
MspA1I	CMGCKG	2 cut(s)	521, 878
MspCI	CTTAAG	1 cut(s)	1586
MspI	CCGG	5 cut(s)	48, 209, 447, 1556, 1647
MspR9I	CCNGG	5 cut(s)	471, 994, 1008, 1068, 1647
MunI	CAATTG	1 cut(s)	24
Mva1269I	GAATGC	2 cut(s)	121, 1557
MvaI	CCWGG	4 cut(s)	471, 994, 1008, 1068
MvnI	CGCG	1 cut(s)	1218
NarI	GGCGCC	1 cut(s)	51
NciI	CCSGG	1 cut(s)	1647
NcoI	CCATGG	1 cut(s)	1570
NdeI	CATATG	1 cut(s)	463
NdeII	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
NlaIV	GGNNCC	4 cut(s)	52, 765, 1020, 1111
NmeAIII	GCCGAG	1 cut(s)	1704
NmuCI	GTSAC	1 cut(s)	792
NsiI	ATGCAT	1 cut(s)	121
NspI	RCATGY	2 cut(s)	1003, 1141
OliI	CACNNNNGTG	1 cut(s)	149
PaeI	GCATGC	1 cut(s)	1003
PaeR7I	CTCGAG	1 cut(s)	80
PagI	TCATGA	1 cut(s)	1099
PciSI	GCTCTTC	1 cut(s)	879
PcsI	WCGNNNNNNNCGW	1 cut(s)	1573
PctI	GAATGC	2 cut(s)	121, 1557
PfeI	GAWTC	3 cut(s)	643, 1194, 1433
PflMI	CCANNNNNTGG	1 cut(s)	533
PfoI	TCCNGGA	1 cut(s)	1066
PleI	GAGTC	1 cut(s)	1263
PluTI	GGCGCC	1 cut(s)	54
PpsI	GAGTC	1 cut(s)	1263
Psp6I	CCWGG	4 cut(s)	469, 992, 1006, 1066
PspFI	CCCAGC	1 cut(s)	889
PspGI	CCWGG	4 cut(s)	469, 992, 1006, 1066
PspN4I	GGNNCC	4 cut(s)	52, 765, 1020, 1111
PspPI	GGNCC	5 cut(s)	467, 542, 734, 990, 1037
PspXI	VCTCGAGB	1 cut(s)	80
PstI	CTGCAG	2 cut(s)	256, 1605
PsuI	RGATCY	4 cut(s)	221, 232, 569, 763
PvuII	CAGCTG	2 cut(s)	521, 878
RsaI	GTAC	4 cut(s)	159, 216, 711, 1275
RsaNI	GTAC	4 cut(s)	158, 215, 710, 1274
RseI	CAYNNNNRTG	1 cut(s)	149
SapI	GCTCTTC	1 cut(s)	879
SaqAI	TTAA	2 cut(s)	1527, 1587
Sau3AI	GATC	7 cut(s)	205, 221, 232, 569, 613, 763, 1087
Sau96I	GGNCC	5 cut(s)	467, 542, 734, 990, 1037
SchI	GAGTC	1 cut(s)	1264
ScrFI	CCNGG	5 cut(s)	471, 994, 1008, 1068, 1647
SduI	GDGCHC	1 cut(s)	340
SfaNI	GCATC	6 cut(s)	51, 853, 949, 1158, 1355, 1523
SfcI	CTRYAG	2 cut(s)	252, 1601
SfoI	GGCGCC	1 cut(s)	52
Sfr274I	CTCGAG	1 cut(s)	80
SgrAI	CRCCGGYG	1 cut(s)	47
SinI	GGWCC	3 cut(s)	542, 990, 1037
SlaI	CTCGAG	1 cut(s)	80
SmiMI	CAYNNNNRTG	1 cut(s)	149
SmlI	CTYRAG	4 cut(s)	80, 1172, 1503, 1586
SmoI	CTYRAG	4 cut(s)	80, 1172, 1503, 1586
SphI	GCATGC	1 cut(s)	1003
Sse9I	AATT	5 cut(s)	24, 701, 1463, 1475, 1615
SspDI	GGCGCC	1 cut(s)	50
StyD4I	CCNGG	5 cut(s)	469, 992, 1006, 1066, 1645
StyI	CCWWGG	3 cut(s)	292, 1570, 1676
TaaI	ACNGT	4 cut(s)	304, 335, 487, 532
TaiI	ACGT	1 cut(s)	201
TaqI	TCGA	3 cut(s)	81, 646, 1579
TasI	AATT	5 cut(s)	24, 701, 1463, 1475, 1615
TatI	WGTACW	2 cut(s)	157, 214
TauI	GCSGC	4 cut(s)	62, 65, 68, 71
TfiI	GAWTC	3 cut(s)	643, 1194, 1433
Tru1I	TTAA	2 cut(s)	1527, 1587
Tru9I	TTAA	2 cut(s)	1527, 1587
TscAI	CASTG	7 cut(s)	156, 484, 801, 1170, 1356, 1696, 1719
TseFI	GTSAC	1 cut(s)	792
TseI	GCWGC	9 cut(s)	251, 254, 518, 521, 650, 875, 1178, 1481, 1600
Tsp45I	GTSAC	1 cut(s)	792
TspGWI	ACGGA	1 cut(s)	1248
TspRI	CASTG	7 cut(s)	156, 484, 801, 1170, 1356, 1696, 1719
Van91I	CCANNNNNTGG	1 cut(s)	533
Vha464I	CTTAAG	1 cut(s)	1586
VneI	GTGCAC	1 cut(s)	336
VpaK11BI	GGWCC	3 cut(s)	542, 990, 1037
XbaI	TCTAGA	1 cut(s)	283
XceI	RCATGY	2 cut(s)	1003, 1141
XhoI	CTCGAG	1 cut(s)	80
XmaJI	CCTAGG	1 cut(s)	1676
XmiI	GTMKAC	1 cut(s)	895
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.