Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007335

Physical Location & Seq

Genomic Coordinates Reverse (-)

10786557 .. 10789070

Gene Structure 2514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G19890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGTTATCTCTTCTTCTTCCTAAGTCGAATCGATTCCTTCTTAGAACTTTTGAGATACCCAATTCTCTCTGTTCTCTTTTCTTCTTCAGATTGATCTCTTCCGATCATGAATCCAGTGATTTGTCTCTTCCTTCTTCTCCATCATCGTCACCTTCTCAATGTCTCGTTAAATCGGTCTGTTCATTGGTTTGTACTTCCTATCTTCGTCAAAACCATGTCGTATCATCCCCACACCGAGTCAATCTCGACTTCGATGCTAATTCTCTTACCCACGAGCAAGCGATCACTGTGGTGGCTTCACTCGCGAGCGAATCTGGTTCGATGGTTGCTCTGTGCTTCTTCTATTGGGCAGTGGGTTTCGAAAAGTTCCGACATTTCATGAGATTGTATCTCGTAACCGCTGATTCTTTGCTTGCTAATGGGAATTTGCAGAAAGCTCACGAGGTTATGCGATGCATGCTTAGAAATTTCTCGGAGATTGGGAGATTGAATGAGGCTGTTGGTATGGTTATGGATATGCAGAATCAGGGGTTAACACCTAGCTCGATAACTATGAATTGTGTTCTCGAAATTGCCGTTGAGTTGGGTTTGATTGAATATGCAGAGAATGTGTTCGACGAAATGTCTGTGAGAGGAGTAGTTCCGGATTCTAGTTCTTATAAGCTTATGGTTATTGGTTGTTTTAGAGATGGTAAGATTCAGGAAGCTGATAGATGGTTAACTGGAATGATTCAAAGAGGATTTATTCCTGATAACGCTACATGTACCTTGATTCTCACTGCATTGTGTGAGAATGGTTTAGTGAATAGAGCGATTTGGTATTTCCGTAAGATGATTGATCTAGGGTTTAAGCCAAACTTGATAAATTTTACGTCTTTGATTGATGGGTTATGCAAGAAGGGTAGTATCAAGCAGGCTTTTGAAATGTTAGAGGAAATGGTTAGAAATGGGTGGAAGCCAAATGTGTATACACACACGGCTTTAATTGATGGGCTATGTAAAAGAGGATGGACTGAGAAAGCGTTTAGGCTGTTCCTGAAACTCGTTCGTAGTGATACTTACAAACCCAATGTGCATACTTATACTTCGATGATTGGTGGGTATTGCAAGGAAGATAAGTTGAACCGTGCAGAGATGTTGTTTAGTAGAATGAAAGAACAGGGTTTGTTTCCGAACGTGAACACGTATACAACACTCATCAATGGTCACTGTAAAGCAGGAAGCTTCGGTAGAGCGTACGAGTTGATGAATTTGATGGGTGATGAAGGTTTTATGCCGAATATTTATACGTATAATGCAGCTATTGACAGTCTCTGTAAGAAATCAAGGGCACCTGAGGCATATGAGTTGCTGAATAAAGCATTTTCTTGTGGATTAGAAGCTGATGGAGTTACTTACACTATTCTTATTCAAGAACAGTGTAAGCAAAATGACATTAACCAAGCTCTTGCTTTTTTCTGTCGGATGAATAAGACTGGTTTTGAAGCCGATATGCGCCTGAACAACATACTGATAGCTGCATTTTGTAGGCAAAAGAAAATGAAGGAAAGTGAGAGGCTTTTTCAGTTGGTGGTGAGTCTTGGATTGATTCCAACGAAGGAGACTTATACGTCTATGATAAGCTGTTATTGTAAAGAAGGCGACATTGATCTGGCTTTGAAATATTTTCACAACATGAAGAGGCATGGTTGTGTTCCTGATAGCTTCACTTATGGTTCACTAATAAGCGGTCTCTGCAAGAAGTCCATGGTAGATGAAGCTTGTAAGCTTTACGAAGCGATGATTGACAGAGGTTTATCTCCTCCTGAGGTAACTCGAGTCACATTAGCATATGAGTATTGTAAGAGGAATGATTCAGCCAATGCAATGATTCTGCTTGAACCTTTAGATAAGAAGCTGTGGATTAGAACGGTTAGGACACTTGTTAGAAAGTTATGTAGCGAGAAGAAAGTTGGAGTGGCAGCTCTGTTCTTTCAGAAATTGTTGGAGAAGGACAGTAGTGCTGATCGTGTTACCTTAGCTGCTTTCACTACAGCTTGTTCTGAGTCTGGCAAAAACAACCTTGTTACTGATTTGACTGAGAGAATCTCCAGAGGAGTAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

701

Amino Acids

78.98

Weight (kDa)

8.47

Isoelectric Point (pI)

34.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	180 - 228	1.3e-07	PPR repeat family
PPR_2	PF13041	250 - 299	2.7e-09	PPR repeat family
PPR_3	PF13812	275 - 330	1.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	282 - 314	1.7e-11	PPR repeat
PPR_2	PF13041	285 - 334	1.7e-17	PPR repeat family
PPR	PF01535	290 - 317	7.7e-07	PPR repeat
PPR_3	PF13812	309 - 369	1e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	317 - 345	3e-09	PPR repeat
PPR_2	PF13041	326 - 370	2.3e-10	PPR repeat family
PPR_3	PF13812	352 - 401	2.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	354 - 385	6.3e-10	PPR repeat
PPR_2	PF13041	356 - 405	7.7e-19	PPR repeat family
PPR	PF01535	360 - 389	2.3e-08	PPR repeat
PPR_long	PF17177	373 - 470	3.2e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	380 - 436	6.4e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	388 - 419	7.4e-11	PPR repeat
PPR_2	PF13041	391 - 440	6.8e-15	PPR repeat family
PPR	PF01535	395 - 424	9.1e-06	PPR repeat
PPR_1	PF12854	423 - 453	7.7e-07	PPR repeat
PPR_2	PF13041	426 - 475	3.2e-10	PPR repeat family
PPR_2	PF13041	464 - 497	1.6e-06	PPR repeat family
PPR_long	PF17177	470 - 608	1.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	502 - 541	4.4e-06	PPR repeat family
PPR_3	PF13812	520 - 576	4.7e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	528 - 560	6e-08	PPR repeat
PPR_2	PF13041	534 - 580	8.5e-18	PPR repeat family
PPR	PF01535	535 - 564	5.4e-10	PPR repeat
PPR_1	PF12854	563 - 594	1.2e-11	PPR repeat
PPR	PF01535	569 - 599	1.9e-07	PPR repeat
PPR_2	PF13041	570 - 615	5.3e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19890
fragaria_vesca	FvH4_3g12270 FvH4_3g12270 FvH4_3g12270
malus_domestica	MD05G1251800.v1.1
prunus_persica	Prupe.4G111800_v2.0.a1
pyrus_communis	pycom05g22980 pycom10g19560
rosa_chinensis	RchiOBHm_Chr5g0020081 RchiOBHm_Chr7g0211421
rosa_laevigata	RLG00000032497
rosa_multiflora	Rmu_sc0021557.1_g000003
rosa_roxburghii	Rroxscaffold_1G00058120
rosa_rugosa	Rorug05G0056700
rosa_samantha	Rh5AG146800 Rh5BG146300 Rh5CG157900 Rh5DG145800 Rh6CG070300 Rh6DG067500 Rh7AG292200 Rh7CG312200 Rh7DG257000 Rh7DG263700
rosa_wichuraiana	Rw5G012970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	660
AasI	GACNNNNNNGTC	1 cut(s)	1609
AccB1I	GGYRCC	1 cut(s)	1330
AccI	GTMKAC	2 cut(s)	968, 1187
AccII	CGCG	1 cut(s)	305
AccIII	TCCGGA	1 cut(s)	643
AciI	CCGC	2 cut(s)	399, 1728
AcsI	RAATTY	4 cut(s)	424, 466, 865, 1249
AcuI	CTGAAG	1 cut(s)	70
AfaI	GTAC	3 cut(s)	193, 766, 1238
AflIII	ACRYGT	2 cut(s)	761, 1182
AgsI	TTSAA	9 cut(s)	490, 596, 734, 923, 1123, 1412, 1484, 1660, 1880
AhdI	GACNNNNNGTC	1 cut(s)	622
AleI	CACNNNNGTG	1 cut(s)	290
Alw26I	GTCTC	5 cut(s)	129, 167, 1316, 1595, 1736
AlwNI	CAGNNNCTG	1 cut(s)	1314
Ama87I	CYCGRG	1 cut(s)	1815
Aor13HI	TCCGGA	1 cut(s)	643
ApeKI	GCWGC	4 cut(s)	1298, 1517, 1961, 2021
ApoI	RAATTY	4 cut(s)	424, 466, 865, 1249
Asp700I	GAANNNNTTC	2 cut(s)	32, 611
AspLEI	GCGC	1 cut(s)	1497
AsuHPI	GGTGA	3 cut(s)	141, 1271, 1585
AsuII	TTCGAA	1 cut(s)	360
AvaI	CYCGRG	1 cut(s)	1815
AxyI	CCTNAGG	2 cut(s)	1335, 1806
BaeGI	GKGCMC	1 cut(s)	1333
BanI	GGYRCC	1 cut(s)	1330
BauI	CACGAG	2 cut(s)	272, 440
BbvI	GCAGC	4 cut(s)	1310, 1504, 1973, 2008
BccI	CCATC	9 cut(s)	148, 316, 683, 708, 878, 983, 1002, 1249, 1379
BceAI	ACGGC	2 cut(s)	560, 993
BcgI	CGANNNNNNTGC	2 cut(s)	236, 270
BcoDI	GTCTC	5 cut(s)	129, 167, 1316, 1595, 1736
BfaI	CTAG	4 cut(s)	540, 651, 842, 2104
BfmI	CTRYAG	1 cut(s)	2031
BisI	GCNGC	4 cut(s)	1299, 1518, 1962, 2022
BlsI	GCNGC	4 cut(s)	1300, 1519, 1963, 2023
BmeRI	GACNNNNNGTC	1 cut(s)	622
BmeT110I	CYCGRG	1 cut(s)	1815
BmiI	GGNNCC	1 cut(s)	1332
BmsI	GCATC	2 cut(s)	244, 443
BplI	GAGNNNNNCTC	4 cut(s)	228, 260, 2072, 2104
BpmI	CTGGAG	1 cut(s)	2074
Bpu10I	CCTNAGC	1 cut(s)	2017
Bpu14I	TTCGAA	1 cut(s)	360
Bsa29I	ATCGAT	1 cut(s)	31
BsaAI	YACGTR	2 cut(s)	1185, 1290
BsaI	GGTCTC	1 cut(s)	1736
BsaJI	CCNNGG	1 cut(s)	1746
BsaWI	WCCGGW	1 cut(s)	643
Bse1I	ACTGG	3 cut(s)	114, 727, 1480
Bse21I	CCTNAGG	2 cut(s)	1335, 1806
Bse3DI	GCAATG	1 cut(s)	1872
BseAI	TCCGGA	1 cut(s)	643
BseCI	ATCGAT	1 cut(s)	31
BseDI	CCNNGG	1 cut(s)	1746
BseGI	GGATG	3 cut(s)	224, 1013, 1470
BseMI	GCAATG	1 cut(s)	1872
BseMII	CTCAG	5 cut(s)	1005, 1326, 1797, 2034, 2070
BseNI	ACTGG	3 cut(s)	114, 727, 1480
BseRI	GAGGAG	2 cut(s)	648, 1791
BseSI	GKGCMC	1 cut(s)	1333
BseXI	GCAGC	4 cut(s)	1310, 1504, 1973, 2008
BsgI	GTGCAG	1 cut(s)	1149
Bsh1236I	CGCG	1 cut(s)	305
BshNI	GGYRCC	1 cut(s)	1330
BshVI	ATCGAT	1 cut(s)	31
BsiHKCI	CYCGRG	1 cut(s)	1815
BsiSI	CCGG	1 cut(s)	644
BsiWI	CGTACG	1 cut(s)	1236
BsmAI	GTCTC	5 cut(s)	129, 167, 1316, 1595, 1736
Bso31I	GGTCTC	1 cut(s)	1736
BsoBI	CYCGRG	1 cut(s)	1815
Bsp119I	TTCGAA	1 cut(s)	360
Bsp1286I	GDGCHC	1 cut(s)	1333
Bsp13I	TCCGGA	1 cut(s)	643
Bsp143I	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
Bsp19I	CCATGG	1 cut(s)	1746
Bsp68I	TCGCGA	1 cut(s)	305
BspACI	CCGC	2 cut(s)	399, 1728
BspCNI	CTCAG	5 cut(s)	1006, 1327, 1798, 2035, 2071
BspDI	ATCGAT	1 cut(s)	31
BspEI	TCCGGA	1 cut(s)	643
BspFNI	CGCG	1 cut(s)	305
BspHI	TCATGA	2 cut(s)	106, 378
BspLI	GGNNCC	1 cut(s)	1332
BspT104I	TTCGAA	1 cut(s)	360
BspT107I	GGYRCC	1 cut(s)	1330
BspTNI	GGTCTC	1 cut(s)	1736
BsrDI	GCAATG	1 cut(s)	1872
BsrI	ACTGG	3 cut(s)	114, 727, 1480
BssECI	CCNNGG	1 cut(s)	1746
BssMI	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
BssNAI	GTATAC	2 cut(s)	969, 1188
BssSI	CACGAG	2 cut(s)	272, 440
BssT1I	CCWWGG	1 cut(s)	1746
Bst1107I	GTATAC	2 cut(s)	969, 1188
Bst2BI	CACGAG	2 cut(s)	272, 440
Bst4CI	ACNGT	7 cut(s)	289, 1127, 1211, 1310, 1419, 1912, 1997
Bst6I	CTCTTC	4 cut(s)	15, 103, 132, 1673
BstBAI	YACGTR	2 cut(s)	1185, 1290
BstBI	TTCGAA	1 cut(s)	360
BstC8I	GCNNGC	5 cut(s)	279, 307, 414, 458, 915
BstDEI	CTNAG	9 cut(s)	21, 41, 461, 1014, 1335, 1806, 2017, 2043, 2079
BstDSI	CCRYGG	1 cut(s)	1746
BstF5I	GGATG	3 cut(s)	224, 1013, 1470
BstFNI	CGCG	1 cut(s)	305
BstHHI	GCGC	1 cut(s)	1497
BstKTI	GATC	6 cut(s)	96, 106, 285, 841, 1651, 2008
BstMAI	GTCTC	5 cut(s)	129, 167, 1316, 1595, 1736
BstMBI	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
BstMWI	GCNNNNNNNGC	4 cut(s)	302, 457, 1337, 1734
BstNSI	RCATGY	2 cut(s)	460, 765
BstSFI	CTRYAG	1 cut(s)	2031
BstSLI	GKGCMC	1 cut(s)	1333
BstSNI	TACGTA	1 cut(s)	1290
BstUI	CGCG	1 cut(s)	305
BstV1I	GCAGC	4 cut(s)	1310, 1504, 1973, 2008
BstZ17I	GTATAC	2 cut(s)	969, 1188
Bsu15I	ATCGAT	1 cut(s)	31
Bsu36I	CCTNAGG	2 cut(s)	1335, 1806
BsuTUI	ATCGAT	1 cut(s)	31
BtgI	CCRYGG	1 cut(s)	1746
BtgZI	GCGATG	2 cut(s)	466, 1793
BtsCI	GGATG	3 cut(s)	224, 1013, 1470
BtsI	GCAGTG	2 cut(s)	357, 777
BtsIMutI	CAGTG	6 cut(s)	121, 285, 357, 777, 1207, 1424
BtuMI	TCGCGA	1 cut(s)	305
Cac8I	GCNNGC	5 cut(s)	279, 307, 414, 458, 915
CaiI	CAGNNNCTG	1 cut(s)	1314
CciI	TCATGA	2 cut(s)	106, 378
CfoI	GCGC	1 cut(s)	1497
ClaI	ATCGAT	1 cut(s)	31
Csp6I	GTAC	3 cut(s)	192, 765, 1237
CviAII	CATG	8 cut(s)	107, 215, 379, 457, 762, 1675, 1685, 1747
CviQI	GTAC	3 cut(s)	192, 765, 1237
DdeI	CTNAG	9 cut(s)	21, 41, 461, 1014, 1335, 1806, 2017, 2043, 2079
DpnI	GATC	6 cut(s)	95, 105, 284, 840, 1650, 2007
DpnII	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
DrdI	GACNNNNNNGTC	1 cut(s)	1609
DriI	GACNNNNNGTC	1 cut(s)	622
DseDI	GACNNNNNNGTC	1 cut(s)	1609
Eam1104I	CTCTTC	4 cut(s)	15, 103, 132, 1673
Eam1105I	GACNNNNNGTC	1 cut(s)	622
EarI	CTCTTC	4 cut(s)	15, 103, 132, 1673
Eco105I	TACGTA	1 cut(s)	1290
Eco130I	CCWWGG	1 cut(s)	1746
Eco31I	GGTCTC	1 cut(s)	1736
Eco57I	CTGAAG	1 cut(s)	70
Eco81I	CCTNAGG	2 cut(s)	1335, 1806
Eco88I	CYCGRG	1 cut(s)	1815
EcoT14I	CCWWGG	1 cut(s)	1746
EcoT22I	ATGCAT	1 cut(s)	458
ErhI	CCWWGG	1 cut(s)	1746
FaeI	CATG	8 cut(s)	110, 218, 382, 460, 765, 1678, 1688, 1750
FalI	AAGNNNNNCTT	2 cut(s)	842, 874
FatI	CATG	8 cut(s)	106, 214, 378, 456, 761, 1674, 1684, 1746
FauNDI	CATATG	2 cut(s)	1342, 1831
FblI	GTMKAC	2 cut(s)	968, 1187
Fnu4HI	GCNGC	4 cut(s)	1299, 1518, 1962, 2022
FokI	GGATG	3 cut(s)	211, 1020, 1477
Fsp4HI	GCNGC	4 cut(s)	1299, 1518, 1962, 2022
FspBI	CTAG	4 cut(s)	540, 651, 842, 2104
GlaI	GCGC	1 cut(s)	1496
GluI	GCNGC	4 cut(s)	1299, 1518, 1962, 2022
GsuI	CTGGAG	1 cut(s)	2074
HapII	CCGG	1 cut(s)	644
HhaI	GCGC	1 cut(s)	1497
Hin1II	CATG	8 cut(s)	110, 218, 382, 460, 765, 1678, 1688, 1750
Hin6I	GCGC	1 cut(s)	1495
HinP1I	GCGC	1 cut(s)	1495
HincII	GTYRAC	2 cut(s)	534, 720
HindII	GTYRAC	2 cut(s)	534, 720
HindIII	AAGCTT	4 cut(s)	662, 1222, 1758, 1766
HpaI	GTTAAC	2 cut(s)	534, 720
HpaII	CCGG	1 cut(s)	644
HphI	GGTGA	3 cut(s)	141, 1271, 1585
Hpy166II	GTNNAC	6 cut(s)	534, 720, 969, 1180, 1188, 1718
Hpy188I	TCNGA	8 cut(s)	89, 103, 371, 475, 1173, 1464, 1977, 2044
Hpy8I	GTNNAC	6 cut(s)	534, 720, 969, 1180, 1188, 1718
Hpy99I	CGWCG	1 cut(s)	620
HpyAV	CCTTC	9 cut(s)	47, 141, 162, 892, 1259, 1537, 1591, 1631, 1984
HpyCH4III	ACNGT	7 cut(s)	289, 1127, 1211, 1310, 1419, 1912, 1997
HpyCH4IV	ACGT	5 cut(s)	872, 1176, 1184, 1289, 1610
HpyF10VI	GCNNNNNNNGC	4 cut(s)	302, 457, 1337, 1734
HpyF3I	CTNAG	9 cut(s)	21, 41, 461, 1014, 1335, 1806, 2017, 2043, 2079
HpySE526I	ACGT	5 cut(s)	872, 1176, 1184, 1289, 1610
Hsp92II	CATG	8 cut(s)	110, 218, 382, 460, 765, 1678, 1688, 1750
HspAI	GCGC	1 cut(s)	1495
Kpn2I	TCCGGA	1 cut(s)	643
KspAI	GTTAAC	2 cut(s)	534, 720
Kzo9I	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
Lsp1109I	GCAGC	4 cut(s)	1310, 1504, 1973, 2008
LweI	GCATC	2 cut(s)	244, 443
MaeI	CTAG	4 cut(s)	540, 651, 842, 2104
MaeII	ACGT	5 cut(s)	872, 1176, 1184, 1289, 1610
MaeIII	GTNAC	8 cut(s)	147, 394, 1205, 1390, 1810, 1819, 2011, 2065
MalI	GATC	6 cut(s)	95, 105, 284, 840, 1650, 2007
MboI	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
MhlI	GDGCHC	1 cut(s)	1333
MlyI	GAGTC	4 cut(s)	246, 1585, 1827, 2054
MmeI	TCCRAC	5 cut(s)	394, 1442, 1616, 1933, 1965
Mph1103I	ATGCAT	1 cut(s)	458
MroI	TCCGGA	1 cut(s)	643
MroXI	GAANNNNTTC	2 cut(s)	32, 611
MseI	TTAA	6 cut(s)	168, 533, 719, 849, 983, 1437
MslI	CAYNNNNRTG	2 cut(s)	290, 1689
MspA1I	CMGCKG	1 cut(s)	401
MspI	CCGG	1 cut(s)	644
MvnI	CGCG	1 cut(s)	305
MwoI	GCNNNNNNNGC	4 cut(s)	302, 457, 1337, 1734
NcoI	CCATGG	1 cut(s)	1746
NdeI	CATATG	2 cut(s)	1342, 1831
NdeII	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
NlaIII	CATG	8 cut(s)	110, 218, 382, 460, 765, 1678, 1688, 1750
NlaIV	GGNNCC	1 cut(s)	1332
NmuCI	GTSAC	3 cut(s)	147, 1205, 1819
NruI	TCGCGA	1 cut(s)	305
NsiI	ATGCAT	1 cut(s)	458
NspI	RCATGY	2 cut(s)	460, 765
NspV	TTCGAA	1 cut(s)	360
OliI	CACNNNNGTG	1 cut(s)	290
PaeI	GCATGC	1 cut(s)	460
PaeR7I	CTCGAG	1 cut(s)	1815
PagI	TCATGA	2 cut(s)	106, 378
PciI	ACATGT	1 cut(s)	761
PcsI	WCGNNNNNNNCGW	1 cut(s)	573
PdmI	GAANNNNTTC	2 cut(s)	32, 611
Pfl23II	CGTACG	1 cut(s)	1236
PkrI	GCNGC	4 cut(s)	1300, 1519, 1963, 2023
PleI	GAGTC	4 cut(s)	245, 1584, 1826, 2053
PpsI	GAGTC	4 cut(s)	245, 1584, 1826, 2053
Ppu21I	YACGTR	2 cut(s)	1185, 1290
PscI	ACATGT	1 cut(s)	761
PsiI	TTATAA	1 cut(s)	660
PspLI	CGTACG	1 cut(s)	1236
PspN4I	GGNNCC	1 cut(s)	1332
PspXI	VCTCGAGB	1 cut(s)	1815
PstNI	CAGNNNCTG	1 cut(s)	1314
RruI	TCGCGA	1 cut(s)	305
RsaI	GTAC	3 cut(s)	193, 766, 1238
RsaNI	GTAC	3 cut(s)	192, 765, 1237
RseI	CAYNNNNRTG	2 cut(s)	290, 1689
SaqAI	TTAA	6 cut(s)	168, 533, 719, 849, 983, 1437
SatI	GCNGC	4 cut(s)	1299, 1518, 1962, 2022
Sau3AI	GATC	6 cut(s)	93, 103, 282, 838, 1648, 2005
SchI	GAGTC	4 cut(s)	246, 1585, 1827, 2054
SduI	GDGCHC	1 cut(s)	1333
SfaNI	GCATC	2 cut(s)	244, 443
SfcI	CTRYAG	1 cut(s)	2031
Sfr274I	CTCGAG	1 cut(s)	1815
SfuI	TTCGAA	1 cut(s)	360
SlaI	CTCGAG	1 cut(s)	1815
SmiMI	CAYNNNNRTG	2 cut(s)	290, 1689
SmlI	CTYRAG	1 cut(s)	1815
SmoI	CTYRAG	1 cut(s)	1815
SnaBI	TACGTA	1 cut(s)	1290
SphI	GCATGC	1 cut(s)	460
SsiI	CCGC	2 cut(s)	399, 1728
SspI	AATATT	2 cut(s)	1282, 1664
SspMI	CTAG	4 cut(s)	540, 651, 842, 2104
StyI	CCWWGG	1 cut(s)	1746
TaaI	ACNGT	7 cut(s)	289, 1127, 1211, 1310, 1419, 1912, 1997
TaiI	ACGT	5 cut(s)	875, 1179, 1187, 1292, 1613
TaqII	GACCGA	1 cut(s)	163
TatI	WGTACW	1 cut(s)	191
Tru1I	TTAA	6 cut(s)	168, 533, 719, 849, 983, 1437
Tru9I	TTAA	6 cut(s)	168, 533, 719, 849, 983, 1437
TscAI	CASTG	6 cut(s)	121, 292, 357, 784, 1214, 1424
TseFI	GTSAC	3 cut(s)	147, 1205, 1819
TseI	GCWGC	4 cut(s)	1298, 1517, 1961, 2021
Tsp45I	GTSAC	3 cut(s)	147, 1205, 1819
TspGWI	ACGGA	1 cut(s)	815
TspRI	CASTG	6 cut(s)	121, 292, 357, 784, 1214, 1424
XapI	RAATTY	4 cut(s)	424, 466, 865, 1249
XceI	RCATGY	2 cut(s)	460, 765
XhoI	CTCGAG	1 cut(s)	1815
XmiI	GTMKAC	2 cut(s)	968, 1187
XmnI	GAANNNNTTC	2 cut(s)	32, 611
XspI	CTAG	4 cut(s)	540, 651, 842, 2104
Zsp2I	ATGCAT	1 cut(s)	458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.