Rh5AG146800

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0007335
Physical Location & Seq
Reverse (-)
15459369 .. 15461291
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG146800.1

Sequence Viewer

Length: 1923 bp
ATGGTATACAAATCCTACTCCCCACAAACCCATTTCAAATCTTCACCTCCAAACCTCAATCTTGATCTAAACCCCGATTCTTTGACCCATGAACACGCCATTTCCGTCGTGGCTTCACTTTCCGACGAGGCCGGGTCCATGGTGGCCCTCAGCTTCTTCTACTGGGCAATTGGGTTTGCGAAATTTCGATACTTTATGCGGCTTTACATCTTCTGCGCCATGTCGATTTTCGGCAATGGCAATTTGGAGAGGACTCATGAAGTGGTTCAGTGTATGGTGAGGAGTTTCGCTGAGATTGGGAGGTTTAAAGAGGCTGCCGATATGGTTTTCGAGATGCATAATCAGGGCCTTGTGTTGAGTACTCGGACTTTAAACTGTGTCATCGGCATTGCTTGCGAAATGGGTTTAATGGAATATGCAGAGAACGTGTTCGACGAAATGTCTGTGAGAGGAGTGTGTCCTGATGGTTTGAGCTTTAAGTGTATGGTTGTTGGGTATTGTCGAAACGGTGCGGTTTTGGAGGTGGATAGGTGGTTGAGTAAGATGATTGAGAGGGGCTTTGTTTTGGACAATGCTAGTTTTACTTTGATTATAAGTGTGTTTTGTGAGAAGGGTTTTGTGAGTAGAGCGTCTTGGTGTTTCGATAAGATGAGTAAGATGGGGGTGAAGCCGAATTTGGTTAACTTTACGTCTTTGATACATGGGTTGTGCAAGAGGGGGAGTGTTAAGCAGGCGTTTGAGATGTTGGAGGAGATGGTTAGGAGAGGTTGGAAGCCGAATGTGTATACACATACCGCGTTGATTGATGGGTTGTGCAAGAAAGGTTGGACTGAGAGGGCGTTTAGGCTGTTTCTGAAGCTTGTCCGGAGTGATAGTTATAAGCCAAATGTGCATACTTATACTGCGATGATCAGTGGATATTGCAAGGAGGATAAAATGAGCCGTGCGGAGATGTTGTTGAGCAGAATGAAGGAACAAGAATTAGTTCCTAACACCAATACGTATACTACTCTCGTTTATGGGCATTGCAAAGCTGGGAATTTTGAAAGAGCATATGAATTGATGGATGTAATGAGTGAAGAAGGATTTGCTCCAAATATATGTACATACAATGCAGTTATGGACAGTCTCTGTAAAAAGGGAAGGGTCCAAGAAGCTTATAAACTGATTAAGAAGGGCCTTCGCCGAGGATTGCAGGCTGATAGAGTCACGTATACCATTTTCATATCCGAGCACTGCAAACGGGGTGATATTAACGGTGCCCTAGCTTTTTTCAATAAGATGGTCAAGGCTGGATTGGAGCCTGATATACATTCATATACCACTTTGATTGCTGCCTTCTGCAGGCAAAAGAAAATGAAAGAAAGCGAGAAACTTTTCAAGGTAGCTGTAAGGCTTGGCTTGATTCCGGCCAAGGAGACCTATACATCCATGATATGTGGGTACTGTAGGGATGGAAATATTGCTTTGGCTGTAAAGTTCTTCCACAGGATGAGTGATCATGGTTGTTCCCCGGATAGTTTTACTTATGGTGCTCTAATAAGTGGGCTCTGCAAGGAGGAAAAACTTGACGAGGCTCGTAAGTTATATGATACCATGATGGACAAGGGGCTGTCACCCTGTGAAGTTACTAGGTTGACATTAGCTCACGAGTATTGCCAAAAAGATGACTATGCCACTGCTATGGTCATCTTAGACAGGCTAGACAAGAAGTTATGGATCCGCACGGTTAACACATTGGTCAGGAAGCTTTGTTGTGAGAAGAAAGTGGGAATAGCAGCATTGTTCTTTCACAAATTAGTTGATAAGGATCAGAATGTGGATCGTGTGACATTGCAAGCATTTATGACTGCATGTTATGAGAGCAACAAGTATGCCCTTCTTTCGGATTTGACTGAGAGAATCTCTAAAGGAATTGGCTAG

Protein Analysis

640

Amino Acids

72.73

Weight (kDa)

8.78

Isoelectric Point (pI)

32.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 121 - 168 1.4e-07 PPR repeat family
PPR_2 PF13041 192 - 238 3.3e-09 PPR repeat family
PPR_1 PF12854 220 - 253 1.7e-12 PPR repeat
PPR_2 PF13041 224 - 273 1.9e-18 PPR repeat family
PPR PF01535 229 - 256 6.6e-07 PPR repeat
PPR_3 PF13812 248 - 308 1.6e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 256 - 284 1.7e-09 PPR repeat
PPR_2 PF13041 265 - 308 1.3e-09 PPR repeat family
PPR_long PF17177 279 - 405 1.2e-09 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 286 - 389 5e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 293 - 324 1.9e-09 PPR repeat
PPR_2 PF13041 295 - 344 2.1e-15 PPR repeat family
PPR PF01535 299 - 326 1.6e-07 PPR repeat
PPR_3 PF13812 319 - 375 2.5e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 328 - 358 5.8e-10 PPR repeat
PPR_2 PF13041 334 - 379 4.5e-12 PPR repeat family
PPR PF01535 334 - 363 5.4e-06 PPR repeat
PPR_1 PF12854 362 - 391 4.6e-09 PPR repeat
PPR_2 PF13041 365 - 414 6.5e-14 PPR repeat family
PPR PF01535 369 - 398 8.3e-06 PPR repeat
PPR_1 PF12854 396 - 429 2.5e-08 PPR repeat
PPR_2 PF13041 402 - 449 1.5e-15 PPR repeat family
PPR_long PF17177 408 - 573 1e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 432 - 461 7.5e-07 PPR repeat
PPR_2 PF13041 435 - 481 1.4e-08 PPR repeat family
PPR_1 PF12854 469 - 499 5.1e-08 PPR repeat
PPR PF01535 474 - 503 1.5e-07 PPR repeat
PPR_2 PF13041 474 - 519 2.6e-16 PPR repeat family
PPR_1 PF12854 502 - 533 8.9e-12 PPR repeat
PPR_2 PF13041 508 - 553 1.6e-08 PPR repeat family
PPR PF01535 508 - 538 4.9e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 593, 879, 1161
AccB1I GGYRCC 1 cut(s) 1259
AccI GTMKAC 4 cut(s) 6, 785, 1004, 1214
AccII CGCG 1 cut(s) 797
AccIII TCCGGA 1 cut(s) 864
AciI CCGC 5 cut(s) 199, 512, 795, 947, 1723
AclWI GGATC 4 cut(s) 1714, 1727, 1818, 1830
AcoI YGGCCR 1 cut(s) 1410
AcsI RAATTY 3 cut(s) 182, 673, 1039
AcuI CTGAAG 1 cut(s) 875
AdeI CACNNNGTG 1 cut(s) 1622
AfaI GTAC 3 cut(s) 361, 1105, 1445
AfiI CCNNNNNNNGG 2 cut(s) 1344, 1885
AflIII ACRYGT 1 cut(s) 426
AgsI TTSAA 4 cut(s) 37, 1046, 1276, 1381
AhdI GACNNNNNGTC 1 cut(s) 439
AjuI GAANNNNNNNTTGG 2 cut(s) 659, 691
AluBI AGCT 9 cut(s) 153, 474, 859, 1034, 1157, 1268, 1388, 1646, 1750
AluI AGCT 9 cut(s) 153, 474, 859, 1034, 1157, 1268, 1388, 1646, 1750
Alw21I GWGCWC 2 cut(s) 1236, 1537
Alw26I GTCTC 2 cut(s) 1133, 1412
AlwI GGATC 4 cut(s) 1714, 1727, 1818, 1830
AlwNI CAGNNNCTG 1 cut(s) 1131
Aor13HI TCCGGA 1 cut(s) 864
AoxI GGCC 5 cut(s) 129, 144, 346, 1177, 1410
ApeKI GCWGC 3 cut(s) 314, 1334, 1778
ApoI RAATTY 3 cut(s) 182, 673, 1039
Asp700I GAANNNNTTC 4 cut(s) 264, 428, 984, 1376
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 5 cut(s) 135, 145, 346, 1147, 1177
AsuC2I CCSGG 2 cut(s) 133, 1514
AsuHPI GGTGA 5 cut(s) 36, 289, 676, 1259, 1608
AvaII GGWCC 2 cut(s) 135, 1147
BaeGI GKGCMC 1 cut(s) 1264
BaeI ACNNNNGTAYC 2 cut(s) 689, 722
BamHI GGATCC 1 cut(s) 1719
BanI GGYRCC 1 cut(s) 1259
BanII GRGCYC 1 cut(s) 1551
BauI CACGAG 1 cut(s) 1649
Bbv12I GWGCWC 2 cut(s) 1236, 1537
BbvCI CCTCAGC 1 cut(s) 149
BbvI GCAGC 3 cut(s) 301, 1321, 1790
BccI CCATC 8 cut(s) 458, 652, 748, 800, 1057, 1276, 1448, 1594
BceAI ACGGC 1 cut(s) 927
BclI TGATCA 2 cut(s) 909, 1498
BcnI CCSGG 2 cut(s) 133, 1514
BcoDI GTCTC 2 cut(s) 1133, 1412
BfaI CTAG 5 cut(s) 576, 1265, 1632, 1703, 1921
BfmI CTRYAG 2 cut(s) 1342, 1447
BisI GCNGC 4 cut(s) 200, 315, 1335, 1779
BlsI GCNGC 4 cut(s) 201, 316, 1336, 1780
BmcAI AGTACT 1 cut(s) 361
Bme1390I CCNGG 2 cut(s) 133, 1514
Bme18I GGWCC 2 cut(s) 135, 1147
BmeRI GACNNNNNGTC 1 cut(s) 439
BmgT120I GGNCC 5 cut(s) 135, 145, 346, 1147, 1177
BmiI GGNNCC 5 cut(s) 136, 1148, 1261, 1302, 1721
BmrFI CCNGG 2 cut(s) 133, 1514
BmrI ACTGGG 1 cut(s) 172
BmsI GCATC 1 cut(s) 324
BmuI ACTGGG 1 cut(s) 172
BplI GAGNNNNNCTC 2 cut(s) 1889, 1921
Bpu10I CCTNAGC 1 cut(s) 149
BpuMI CCSGG 2 cut(s) 133, 1514
BsaAI YACGTR 2 cut(s) 1002, 1212
BsaBI GATNNNNATC 1 cut(s) 1809
BsaI GGTCTC 1 cut(s) 1412
BsaJI CCNNGG 4 cut(s) 138, 1186, 1413, 1512
BsaWI WCCGGW 1 cut(s) 864
BsaXI ACNNNNNCTCC 4 cut(s) 859, 889, 941, 971
Bsc4I CCNNNNNNNGG 2 cut(s) 1344, 1885
Bse1I ACTGG 1 cut(s) 167
Bse3DI GCAATG 4 cut(s) 241, 387, 1024, 1832
Bse8I GATNNNNATC 1 cut(s) 1809
BseAI TCCGGA 1 cut(s) 864
BseDI CCNNGG 4 cut(s) 138, 1186, 1413, 1512
BseGI GGATG 4 cut(s) 1072, 1427, 1459, 1497
BseJI GATNNNNATC 1 cut(s) 1809
BseLI CCNNNNNNNGG 2 cut(s) 1344, 1885
BseMI GCAATG 4 cut(s) 241, 387, 1024, 1832
BseMII CTCAG 4 cut(s) 163, 282, 822, 1887
BseNI ACTGG 1 cut(s) 167
BseRI GAGGAG 3 cut(s) 295, 465, 764
BseSI GKGCMC 1 cut(s) 1264
BseXI GCAGC 3 cut(s) 301, 1321, 1790
BseYI CCCAGC 1 cut(s) 1034
Bsh1236I CGCG 1 cut(s) 797
BshFI GGCC 5 cut(s) 131, 146, 348, 1179, 1412
BshNI GGYRCC 1 cut(s) 1259
BsiHKAI GWGCWC 2 cut(s) 1236, 1537
BsiSI CCGG 4 cut(s) 132, 865, 1409, 1514
BslI CCNNNNNNNGG 2 cut(s) 1344, 1885
BsmAI GTCTC 2 cut(s) 1133, 1412
BsnI GGCC 5 cut(s) 131, 146, 348, 1179, 1412
Bso31I GGTCTC 1 cut(s) 1412
Bsp1286I GDGCHC 4 cut(s) 1236, 1264, 1537, 1551
Bsp13I TCCGGA 1 cut(s) 864
Bsp1407I TGTACA 1 cut(s) 1103
Bsp143I GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
Bsp19I CCATGG 1 cut(s) 138
BspACI CCGC 5 cut(s) 199, 512, 795, 947, 1723
BspANI GGCC 5 cut(s) 131, 146, 348, 1179, 1412
BspCNI CTCAG 4 cut(s) 162, 283, 823, 1888
BspEI TCCGGA 1 cut(s) 864
BspFNI CGCG 1 cut(s) 797
BspHI TCATGA 1 cut(s) 256
BspLI GGNNCC 5 cut(s) 136, 1148, 1261, 1302, 1721
BspMAI CTGCAG 1 cut(s) 1346
BspPI GGATC 4 cut(s) 1714, 1727, 1818, 1830
BspT107I GGYRCC 1 cut(s) 1259
BspTNI GGTCTC 1 cut(s) 1412
BsrDI GCAATG 4 cut(s) 241, 387, 1024, 1832
BsrGI TGTACA 1 cut(s) 1103
BsrI ACTGG 1 cut(s) 167
BssECI CCNNGG 4 cut(s) 138, 1186, 1413, 1512
BssMI GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
BssNAI GTATAC 4 cut(s) 7, 786, 1005, 1215
BssSI CACGAG 1 cut(s) 1649
BssT1I CCWWGG 2 cut(s) 138, 1413
Bst1107I GTATAC 4 cut(s) 7, 786, 1005, 1215
Bst2BI CACGAG 1 cut(s) 1649
Bst4CI ACNGT 6 cut(s) 377, 509, 1127, 1259, 1448, 1729
BstAPI GCANNNNNTGC 1 cut(s) 393
BstAUI TGTACA 1 cut(s) 1103
BstBAI YACGTR 2 cut(s) 1002, 1212
BstC8I GCNNGC 5 cut(s) 394, 732, 1197, 1346, 1839
BstDEI CTNAG 5 cut(s) 149, 291, 831, 1693, 1896
BstDSI CCRYGG 1 cut(s) 138
BstENI CCTNNNNNAGG 1 cut(s) 1342
BstF5I GGATG 4 cut(s) 1072, 1427, 1459, 1497
BstFNI CGCG 1 cut(s) 797
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 6 cut(s) 67, 912, 1501, 1722, 1813, 1825
BstMAI GTCTC 2 cut(s) 1133, 1412
BstMBI GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
BstMWI GCNNNNNNNGC 2 cut(s) 393, 889
BstNSI RCATGY 1 cut(s) 1857
BstSCI CCNGG 2 cut(s) 131, 1512
BstSFI CTRYAG 2 cut(s) 1342, 1447
BstSLI GKGCMC 1 cut(s) 1264
BstSNI TACGTA 1 cut(s) 1002
BstUI CGCG 1 cut(s) 797
BstV1I GCAGC 3 cut(s) 301, 1321, 1790
BstX2I RGATCY 1 cut(s) 1719
BstXI CCANNNNNNTGG 1 cut(s) 1684
BstYI RGATCY 1 cut(s) 1719
BstZ17I GTATAC 4 cut(s) 7, 786, 1005, 1215
BsuRI GGCC 5 cut(s) 131, 146, 348, 1179, 1412
BtgI CCRYGG 1 cut(s) 138
BtgZI GCGATG 1 cut(s) 920
BtsCI GGATG 4 cut(s) 1072, 1427, 1459, 1497
BtsI GCAGTG 2 cut(s) 1234, 1677
BtsIMutI CAGTG 4 cut(s) 275, 919, 1234, 1677
Cac8I GCNNGC 5 cut(s) 394, 732, 1197, 1346, 1839
CaiI CAGNNNCTG 1 cut(s) 1131
CciI TCATGA 1 cut(s) 256
CfoI GCGC 1 cut(s) 218
Cfr13I GGNCC 5 cut(s) 135, 145, 346, 1147, 1177
CseI GACGC 1 cut(s) 618
Csp6I GTAC 3 cut(s) 360, 1104, 1444
CspCI CAANNNNNGTGG 2 cut(s) 1312, 1347
CviAII CATG 9 cut(s) 89, 139, 220, 257, 701, 1432, 1502, 1597, 1854
CviQI GTAC 3 cut(s) 360, 1104, 1444
DdeI CTNAG 5 cut(s) 149, 291, 831, 1693, 1896
DpnI GATC 6 cut(s) 66, 911, 1500, 1721, 1812, 1824
DpnII GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
DraI TTTAAA 2 cut(s) 307, 372
DraIII CACNNNGTG 1 cut(s) 1622
DriI GACNNNNNGTC 1 cut(s) 439
EaeI YGGCCR 1 cut(s) 1410
Eam1105I GACNNNNNGTC 1 cut(s) 439
Eco105I TACGTA 1 cut(s) 1002
Eco130I CCWWGG 2 cut(s) 138, 1413
Eco24I GRGCYC 1 cut(s) 1551
Eco31I GGTCTC 1 cut(s) 1412
Eco47I GGWCC 2 cut(s) 135, 1147
Eco57I CTGAAG 1 cut(s) 875
EcoNI CCTNNNNNAGG 1 cut(s) 1342
EcoO109I RGGNCCY 2 cut(s) 346, 1177
EcoT14I CCWWGG 2 cut(s) 138, 1413
EcoT22I ATGCAT 1 cut(s) 339
EcoT38I GRGCYC 1 cut(s) 1551
ErhI CCWWGG 2 cut(s) 138, 1413
FaeI CATG 9 cut(s) 92, 142, 223, 260, 704, 1435, 1505, 1600, 1857
FatI CATG 9 cut(s) 88, 138, 219, 256, 700, 1431, 1501, 1596, 1853
FauNDI CATATG 1 cut(s) 1054
FbaI TGATCA 2 cut(s) 909, 1498
FblI GTMKAC 4 cut(s) 6, 785, 1004, 1214
Fnu4HI GCNGC 4 cut(s) 200, 315, 1335, 1779
FokI GGATG 4 cut(s) 1079, 1414, 1466, 1504
FriOI GRGCYC 1 cut(s) 1551
Fsp4HI GCNGC 4 cut(s) 200, 315, 1335, 1779
FspBI CTAG 5 cut(s) 576, 1265, 1632, 1703, 1921
GlaI GCGC 1 cut(s) 217
GluI GCNGC 4 cut(s) 200, 315, 1335, 1779
GsaI CCCAGC 1 cut(s) 1038
HaeIII GGCC 5 cut(s) 131, 146, 348, 1179, 1412
HapII CCGG 4 cut(s) 132, 865, 1409, 1514
HgaI GACGC 1 cut(s) 618
HhaI GCGC 1 cut(s) 218
Hin1II CATG 9 cut(s) 92, 142, 223, 260, 704, 1435, 1505, 1600, 1857
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HincII GTYRAC 3 cut(s) 682, 1638, 1732
HindII GTYRAC 3 cut(s) 682, 1638, 1732
HindIII AAGCTT 3 cut(s) 857, 1155, 1748
HinfI GANTC 5 cut(s) 77, 253, 1206, 1405, 1902
HpaI GTTAAC 2 cut(s) 682, 1732
HpaII CCGG 4 cut(s) 132, 865, 1409, 1514
HphI GGTGA 5 cut(s) 36, 289, 676, 1259, 1608
Hpy166II GTNNAC 7 cut(s) 7, 682, 786, 1005, 1215, 1638, 1732
Hpy188I TCNGA 6 cut(s) 124, 366, 855, 1231, 1815, 1888
Hpy188III TCNNGA 7 cut(s) 62, 257, 331, 461, 865, 1649, 1744
Hpy8I GTNNAC 7 cut(s) 7, 682, 786, 1005, 1215, 1638, 1732
Hpy99I CGWCG 3 cut(s) 110, 128, 437
HpyAV CCTTC 8 cut(s) 604, 964, 1076, 1137, 1168, 1190, 1348, 1889
HpyCH4III ACNGT 6 cut(s) 377, 509, 1127, 1259, 1448, 1729
HpyCH4IV ACGT 4 cut(s) 426, 689, 1001, 1211
HpyF10VI GCNNNNNNNGC 2 cut(s) 393, 889
HpyF3I CTNAG 5 cut(s) 149, 291, 831, 1693, 1896
HpySE526I ACGT 4 cut(s) 426, 689, 1001, 1211
Hsp92II CATG 9 cut(s) 92, 142, 223, 260, 704, 1435, 1505, 1600, 1857
HspAI GCGC 1 cut(s) 216
Kpn2I TCCGGA 1 cut(s) 864
Ksp22I TGATCA 2 cut(s) 909, 1498
KspAI GTTAAC 2 cut(s) 682, 1732
Kzo9I GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
LmnI GCTCC 2 cut(s) 1096, 1300
Lsp1109I GCAGC 3 cut(s) 301, 1321, 1790
LweI GCATC 1 cut(s) 324
MaeI CTAG 5 cut(s) 576, 1265, 1632, 1703, 1921
MaeII ACGT 4 cut(s) 426, 689, 1001, 1211
MaeIII GTNAC 4 cut(s) 1207, 1614, 1627, 1828
MalI GATC 6 cut(s) 66, 911, 1500, 1721, 1812, 1824
MboI GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
MboII GAAGA 6 cut(s) 33, 148, 202, 1091, 1474, 1774
MfeI CAATTG 1 cut(s) 168
MflI RGATCY 1 cut(s) 1719
MhlI GDGCHC 4 cut(s) 1236, 1264, 1537, 1551
MluCI AATT 9 cut(s) 168, 182, 241, 673, 980, 1039, 1058, 1796, 1914
MlyI GAGTC 2 cut(s) 247, 1215
MmeI TCCRAC 4 cut(s) 147, 726, 749, 806
Mph1103I ATGCAT 1 cut(s) 339
MroI TCCGGA 1 cut(s) 864
MroXI GAANNNNTTC 4 cut(s) 264, 428, 984, 1376
MseI TTAA 9 cut(s) 306, 371, 407, 477, 681, 726, 1170, 1254, 1731
MslI CAYNNNNRTG 1 cut(s) 1682
MspI CCGG 4 cut(s) 132, 865, 1409, 1514
MspR9I CCNGG 2 cut(s) 133, 1514
MunI CAATTG 1 cut(s) 168
MvnI CGCG 1 cut(s) 797
MwoI GCNNNNNNNGC 2 cut(s) 393, 889
NciI CCSGG 2 cut(s) 133, 1514
NcoI CCATGG 1 cut(s) 138
NdeI CATATG 1 cut(s) 1054
NdeII GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
NlaIII CATG 9 cut(s) 92, 142, 223, 260, 704, 1435, 1505, 1600, 1857
NlaIV GGNNCC 5 cut(s) 136, 1148, 1261, 1302, 1721
NmeAIII GCCGAG 1 cut(s) 1211
NmuCI GTSAC 3 cut(s) 1207, 1614, 1828
NsiI ATGCAT 1 cut(s) 339
NspI RCATGY 1 cut(s) 1857
PagI TCATGA 1 cut(s) 256
PcsI WCGNNNNNNNCGW 2 cut(s) 102, 432
PdmI GAANNNNTTC 4 cut(s) 264, 428, 984, 1376
PfeI GAWTC 3 cut(s) 77, 1405, 1902
PkrI GCNGC 4 cut(s) 201, 316, 1336, 1780
PleI GAGTC 2 cut(s) 247, 1214
PpsI GAGTC 2 cut(s) 247, 1214
Ppu21I YACGTR 2 cut(s) 1002, 1212
PsiI TTATAA 3 cut(s) 593, 879, 1161
PspFI CCCAGC 1 cut(s) 1034
PspN4I GGNNCC 5 cut(s) 136, 1148, 1261, 1302, 1721
PspPI GGNCC 5 cut(s) 135, 145, 346, 1147, 1177
PstI CTGCAG 1 cut(s) 1346
PstNI CAGNNNCTG 1 cut(s) 1131
PsuI RGATCY 1 cut(s) 1719
RsaI GTAC 3 cut(s) 361, 1105, 1445
RsaNI GTAC 3 cut(s) 360, 1104, 1444
RseI CAYNNNNRTG 1 cut(s) 1682
SaqAI TTAA 9 cut(s) 306, 371, 407, 477, 681, 726, 1170, 1254, 1731
SatI GCNGC 4 cut(s) 200, 315, 1335, 1779
Sau3AI GATC 6 cut(s) 64, 909, 1498, 1719, 1810, 1822
Sau96I GGNCC 5 cut(s) 135, 145, 346, 1147, 1177
ScaI AGTACT 1 cut(s) 361
SchI GAGTC 2 cut(s) 247, 1215
ScrFI CCNGG 2 cut(s) 133, 1514
SduI GDGCHC 4 cut(s) 1236, 1264, 1537, 1551
SfaNI GCATC 1 cut(s) 324
SfcI CTRYAG 2 cut(s) 1342, 1447
SinI GGWCC 2 cut(s) 135, 1147
SmiMI CAYNNNNRTG 1 cut(s) 1682
SnaBI TACGTA 1 cut(s) 1002
Sse9I AATT 9 cut(s) 168, 182, 241, 673, 980, 1039, 1058, 1796, 1914
SsiI CCGC 5 cut(s) 199, 512, 795, 947, 1723
SspI AATATT 1 cut(s) 1462
SspMI CTAG 5 cut(s) 576, 1265, 1632, 1703, 1921
StyD4I CCNGG 2 cut(s) 131, 1512
StyI CCWWGG 2 cut(s) 138, 1413
TaaI ACNGT 6 cut(s) 377, 509, 1127, 1259, 1448, 1729
TaiI ACGT 4 cut(s) 429, 692, 1004, 1214
TaqI TCGA 6 cut(s) 187, 224, 330, 432, 502, 642
TasI AATT 9 cut(s) 168, 182, 241, 673, 980, 1039, 1058, 1796, 1914
TatI WGTACW 2 cut(s) 359, 1103
TauI GCSGC 1 cut(s) 202
TfiI GAWTC 3 cut(s) 77, 1405, 1902
Tru1I TTAA 9 cut(s) 306, 371, 407, 477, 681, 726, 1170, 1254, 1731
Tru9I TTAA 9 cut(s) 306, 371, 407, 477, 681, 726, 1170, 1254, 1731
TscAI CASTG 4 cut(s) 275, 919, 1241, 1684
TseFI GTSAC 3 cut(s) 1207, 1614, 1828
TseI GCWGC 3 cut(s) 314, 1334, 1778
Tsp45I GTSAC 3 cut(s) 1207, 1614, 1828
TspDTI ATGAA 7 cut(s) 105, 273, 983, 1071, 1213, 1305, 1373
TspGWI ACGGA 1 cut(s) 94
TspRI CASTG 4 cut(s) 275, 919, 1241, 1684
VpaK11BI GGWCC 2 cut(s) 135, 1147
XagI CCTNNNNNAGG 1 cut(s) 1342
XapI RAATTY 3 cut(s) 182, 673, 1039
XceI RCATGY 1 cut(s) 1857
XcmI CCANNNNNNNNNTGG 1 cut(s) 106
XmiI GTMKAC 4 cut(s) 6, 785, 1004, 1214
XmnI GAANNNNTTC 4 cut(s) 264, 428, 984, 1376
XspI CTAG 5 cut(s) 576, 1265, 1632, 1703, 1921
ZrmI AGTACT 1 cut(s) 361
Zsp2I ATGCAT 1 cut(s) 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.