AT4G19985

Acetyltransferase (GNAT) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
10830232 .. 10832272
2041 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G19985.3

Sequence Viewer

Length: 714 bp
ATGGGTTTGGTGGGTTGTGTTGGTAAGTCTTCTCTTGTATCTATGGAGTTGAGGTGGGCAAGGAGGAGAAAATCTGATAATGCTGCATCGGCATTGCCTCGATCGATACCTATATATATCTCTACGTTGAAGAAAGACATAAATCTAGAGGAATTGAGGAATTTGTATTCACTTTGTAACCATTCTTGCAACCGTTTGTCTGAGAAAGACAGCAACGTTGAAAAGATTGTTGACATGAAAAAGCTGCGTAGAGCTATCTCTCGCAGTGATGTTATTGTATCTGTGTTTTGCAAACCACAACACGTGGATGTTGATGATGCGGTTTTGTATTCAGAAGAAGAAAGTTTATCTTCTTCTTTGTATACTTCAGAATTTGGGAGACAAAATAAGGATGATAGTTTTCTGGGAGACTTGTTTCAGAATGCGGTGCCTCTCACTCCTTCCAATGGACAGCTTGTTGGATTCGGTCGTGCTTATTCTGATTATGGCTTGACCGCTTCTATCCATGATCTAATGGTTTTACCTTCACTACAAAGGATGGGGATTGGTAAACTGATAGTAAACAGAATTGTCAGGCTACTCACAAGCAGAGACATTTACGACATAGCAGCTCTCTGCTTCGAGGATGAAAGGCCATTCTTCAAAGCATGTGGGTTTGGAGATGACAGGATGGGTTCCACAACAATGATGTTCACAAAGAGCTTGGAGGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

237

Amino Acids

26.54

Weight (kDa)

7.58

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 427
AccI GTMKAC 1 cut(s) 362
AciI CCGC 3 cut(s) 320, 425, 495
AclI AACGTT 1 cut(s) 216
AcsI RAATTY 2 cut(s) 160, 371
AcuI CTGAAG 1 cut(s) 351
AcvI CACGTG 1 cut(s) 304
AfiI CCNNNNNNNGG 1 cut(s) 446
AflIII ACRYGT 1 cut(s) 301
AgsI TTSAA 3 cut(s) 130, 221, 643
AluBI AGCT 5 cut(s) 244, 254, 454, 611, 702
AluI AGCT 5 cut(s) 244, 254, 454, 611, 702
Alw26I GTCTC 3 cut(s) 373, 402, 585
AoxI GGCC 1 cut(s) 632
ApeKI GCWGC 3 cut(s) 83, 244, 608
ApoI RAATTY 2 cut(s) 160, 371
BanI GGYRCC 1 cut(s) 427
BbrPI CACGTG 1 cut(s) 304
BbsI GAAGAC 1 cut(s) 21
BbvI GCAGC 3 cut(s) 70, 231, 620
BccI CCATC 2 cut(s) 532, 664
BcoDI GTCTC 3 cut(s) 373, 402, 585
BfaI CTAG 1 cut(s) 146
BisI GCNGC 3 cut(s) 84, 245, 609
BlsI GCNGC 3 cut(s) 85, 246, 610
BmiI GGNNCC 2 cut(s) 429, 676
BmsI GCATC 2 cut(s) 95, 307
BpiI GAAGAC 1 cut(s) 21
Bsa29I ATCGAT 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
Bsc4I CCNNNNNNNGG 1 cut(s) 446
Bse3DI GCAATG 1 cut(s) 92
BseCI ATCGAT 1 cut(s) 104
BseGI GGATG 5 cut(s) 313, 397, 543, 631, 675
BseLI CCNNNNNNNGG 1 cut(s) 446
BseMI GCAATG 1 cut(s) 92
BseMII CTCAG 1 cut(s) 192
BseRI GAGGAG 1 cut(s) 79
BseXI GCAGC 3 cut(s) 70, 231, 620
Bsh1285I CGRYCG 2 cut(s) 104, 469
BshFI GGCC 1 cut(s) 634
BshNI GGYRCC 1 cut(s) 427
BshVI ATCGAT 1 cut(s) 104
BsiEI CGRYCG 2 cut(s) 104, 469
BslI CCNNNNNNNGG 1 cut(s) 446
BsmAI GTCTC 3 cut(s) 373, 402, 585
BsmI GAATGC 1 cut(s) 427
BsnI GGCC 1 cut(s) 634
Bsp143I GATC 2 cut(s) 101, 508
BspACI CCGC 3 cut(s) 320, 425, 495
BspANI GGCC 1 cut(s) 634
BspCNI CTCAG 1 cut(s) 193
BspDI ATCGAT 1 cut(s) 104
BspLI GGNNCC 2 cut(s) 429, 676
BspT107I GGYRCC 1 cut(s) 427
BsrDI GCAATG 1 cut(s) 92
BssMI GATC 2 cut(s) 101, 508
BssNAI GTATAC 1 cut(s) 363
Bst1107I GTATAC 1 cut(s) 363
Bst4CI ACNGT 1 cut(s) 194
BstBAI YACGTR 1 cut(s) 304
BstDEI CTNAG 1 cut(s) 201
BstF5I GGATG 5 cut(s) 313, 397, 543, 631, 675
BstKTI GATC 2 cut(s) 104, 511
BstMAI GTCTC 3 cut(s) 373, 402, 585
BstMBI GATC 2 cut(s) 101, 508
BstMCI CGRYCG 2 cut(s) 104, 469
BstMWI GCNNNNNNNGC 1 cut(s) 89
BstNSI RCATGY 1 cut(s) 651
BstV1I GCAGC 3 cut(s) 70, 231, 620
BstV2I GAAGAC 1 cut(s) 21
BstZ17I GTATAC 1 cut(s) 363
Bsu15I ATCGAT 1 cut(s) 104
BsuRI GGCC 1 cut(s) 634
BsuTUI ATCGAT 1 cut(s) 104
BtsCI GGATG 5 cut(s) 313, 397, 543, 631, 675
BtsI GCAGTG 1 cut(s) 271
BtsIMutI CAGTG 1 cut(s) 271
ClaI ATCGAT 1 cut(s) 104
CspCI CAANNNNNGTGG 2 cut(s) 631, 666
CviAII CATG 3 cut(s) 235, 506, 648
CviJI RGCY 8 cut(s) 244, 254, 454, 489, 577, 611, 634, 702
CviKI_1 RGCY 8 cut(s) 244, 254, 454, 489, 577, 611, 634, 702
DdeI CTNAG 1 cut(s) 201
DpnI GATC 2 cut(s) 103, 510
DpnII GATC 2 cut(s) 101, 508
Eco57I CTGAAG 1 cut(s) 351
Eco72I CACGTG 1 cut(s) 304
FaeI CATG 3 cut(s) 238, 509, 651
FalI AAGNNNNNCTT 2 cut(s) 334, 366
FatI CATG 3 cut(s) 234, 505, 647
FblI GTMKAC 1 cut(s) 362
Fnu4HI GCNGC 3 cut(s) 84, 245, 609
FokI GGATG 5 cut(s) 320, 404, 550, 638, 682
Fsp4HI GCNGC 3 cut(s) 84, 245, 609
FspBI CTAG 1 cut(s) 146
GluI GCNGC 3 cut(s) 84, 245, 609
HaeIII GGCC 1 cut(s) 634
Hin1II CATG 3 cut(s) 238, 509, 651
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HinfI GANTC 1 cut(s) 462
Hpy166II GTNNAC 5 cut(s) 232, 363, 551, 562, 693
Hpy188I TCNGA 6 cut(s) 76, 202, 334, 370, 420, 481
Hpy188III TCNNGA 1 cut(s) 146
Hpy8I GTNNAC 5 cut(s) 232, 363, 551, 562, 693
HpyAV CCTTC 2 cut(s) 450, 534
HpyCH4III ACNGT 1 cut(s) 194
HpyCH4IV ACGT 3 cut(s) 125, 216, 303
HpyCH4V TGCA 3 cut(s) 86, 189, 291
HpyF10VI GCNNNNNNNGC 1 cut(s) 89
HpyF3I CTNAG 1 cut(s) 201
HpySE526I ACGT 3 cut(s) 125, 216, 303
Hsp92II CATG 3 cut(s) 238, 509, 651
Kzo9I GATC 2 cut(s) 101, 508
LpnPI CCDG 3 cut(s) 389, 559, 652
Lsp1109I GCAGC 3 cut(s) 70, 231, 620
LweI GCATC 2 cut(s) 95, 307
MaeI CTAG 1 cut(s) 146
MaeII ACGT 3 cut(s) 125, 216, 303
MaeIII GTNAC 1 cut(s) 176
MalI GATC 2 cut(s) 103, 510
MboI GATC 2 cut(s) 101, 508
MboII GAAGA 7 cut(s) 21, 142, 342, 345, 347, 350, 631
MluCI AATT 4 cut(s) 152, 160, 371, 567
MmeI TCCRAC 1 cut(s) 439
MnlI CCTC 8 cut(s) 45, 57, 108, 142, 150, 441, 616, 700
MslI CAYNNNNRTG 2 cut(s) 306, 683
Mva1269I GAATGC 1 cut(s) 427
MwoI GCNNNNNNNGC 1 cut(s) 89
NdeII GATC 2 cut(s) 101, 508
NlaIII CATG 3 cut(s) 238, 509, 651
NlaIV GGNNCC 2 cut(s) 429, 676
NspI RCATGY 1 cut(s) 651
PctI GAATGC 1 cut(s) 427
PfeI GAWTC 1 cut(s) 462
PkrI GCNGC 3 cut(s) 85, 246, 610
Ple19I CGATCG 1 cut(s) 104
PmaCI CACGTG 1 cut(s) 304
PmlI CACGTG 1 cut(s) 304
Ppu21I YACGTR 1 cut(s) 304
Psp1406I AACGTT 1 cut(s) 216
PspCI CACGTG 1 cut(s) 304
PspN4I GGNNCC 2 cut(s) 429, 676
PvuI CGATCG 1 cut(s) 104
RseI CAYNNNNRTG 2 cut(s) 306, 683
SatI GCNGC 3 cut(s) 84, 245, 609
Sau3AI GATC 2 cut(s) 101, 508
SfaNI GCATC 2 cut(s) 95, 307
SmiMI CAYNNNNRTG 2 cut(s) 306, 683
Sse9I AATT 4 cut(s) 152, 160, 371, 567
SsiI CCGC 3 cut(s) 320, 425, 495
SspMI CTAG 1 cut(s) 146
TaaI ACNGT 1 cut(s) 194
TaiI ACGT 3 cut(s) 128, 219, 306
TaqI TCGA 3 cut(s) 100, 104, 621
TaqII GACCGA 1 cut(s) 455
TasI AATT 4 cut(s) 152, 160, 371, 567
TfiI GAWTC 1 cut(s) 462
TscAI CASTG 1 cut(s) 271
TseI GCWGC 3 cut(s) 83, 244, 608
TspDTI ATGAA 2 cut(s) 251, 642
TspRI CASTG 1 cut(s) 271
XapI RAATTY 2 cut(s) 160, 371
XbaI TCTAGA 1 cut(s) 145
XceI RCATGY 1 cut(s) 651
XmiI GTMKAC 1 cut(s) 362
XspI CTAG 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.