pycom07g21460

Acetyltransferase (GNAT) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0009063
Physical Location & Seq
Reverse (-)
23160057 .. 23161366
1310 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g21460.3

Sequence Viewer

Length: 852 bp
ATGGAGGTCAGTGCAGCGGTGGCTACGGCGGCTGCCGCCATGTCCGTCAAGAGCATGGAGTTGAAATGGGTAAGCAGCAGAGGCAAAACCCAGATGGAAAAAACCATAAAAACGCCATCAAAGTCCAAATCGCCATTTCCCCTGCAAGCCATGGTCCCAATTTTCATATCCACAAACCCATCTCACGTACACCCATCTGACCTCCGAGACCTCTTCACCGCCTGCAAACTCTCACCCCACCGGTTCCCCGATTACGCCGACGACGGCGGCGTTGAAGCCGTCGACTTGCACAAGCTGCGCATTGCTCTCTCCCACAGCTCAGTCCTGGTCTCTGTCTTCTGCAAGCCAAGTGATTTAATTGGTGATTCATCATCGTTATCTTCTTCCATCGAAGCGCAGCAGCAAAAGAGGAAGAAGAAGAAGACGGTTGGCTTTGGAGAGTTGCTTCATAATGCGGTGACGCCTGTTTCACCATCTAACGGTCAGTTGGTCGGCTTTGGCCGCGCCGTTTCCGATCTCGGACTCACCGCCTCCGTCTACGATGTCATGGTGATTCCTTCGTTGCGGGAAATGGGAATCGGCAGGATGATTGTTAGAAGAATCATAAGAATACTCACAAGTAGAGACATCTATGACATAGCAGCCCTGTGCTCAGAAGATGAGAGGTCATTCTTCAAAGGGTGTGGCTTTGGGGATGACATTTTGGCCTCCACTGCAATGATGTATACAAGGAGTAGTATTTCAACTGATCCTGAAGGCAATCAACAGATGATTAAACGTGCCGGTCGGAAGCTATTGCTAGTTCCACCCCTCTTAAGTACCTTAGGATGCAAGAAGACTAGGAAATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

284

Amino Acids

30.73

Weight (kDa)

9.59

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 299
AccI GTMKAC 3 cut(s) 282, 537, 725
AccII CGCG 1 cut(s) 504
AciI CCGC 9 cut(s) 17, 29, 36, 219, 267, 455, 502, 528, 565
AclWI GGATC 1 cut(s) 743
AcoI YGGCCR 1 cut(s) 499
AcuI CTGAAG 1 cut(s) 774
AcyI GRCGYC 1 cut(s) 461
AfaI GTAC 2 cut(s) 189, 820
AfiI CCNNNNNNNGG 1 cut(s) 479
AflII CTTAAG 1 cut(s) 814
AgeI ACCGGT 1 cut(s) 240
AgsI TTSAA 4 cut(s) 64, 275, 676, 744
AjnI CCWGG 1 cut(s) 324
AluBI AGCT 3 cut(s) 295, 318, 793
AluI AGCT 3 cut(s) 295, 318, 793
Alw21I GWGCWC 1 cut(s) 653
Alw26I GTCTC 3 cut(s) 201, 334, 618
AlwI GGATC 1 cut(s) 743
AoxI GGCC 2 cut(s) 499, 705
ApeKI GCWGC 7 cut(s) 14, 32, 75, 295, 397, 400, 641
AsiGI ACCGGT 1 cut(s) 240
AspLEI GCGC 3 cut(s) 300, 397, 506
AspS9I GGNCC 1 cut(s) 154
AsuHPI GGTGA 7 cut(s) 208, 225, 374, 462, 469, 517, 562
AvaII GGWCC 1 cut(s) 154
AxyI CCTNAGG 1 cut(s) 823
BbsI GAAGAC 3 cut(s) 328, 428, 842
Bbv12I GWGCWC 1 cut(s) 653
BbvI GCAGC 7 cut(s) 19, 26, 87, 282, 409, 412, 653
BccI CCATC 6 cut(s) 88, 124, 187, 202, 395, 481
BceAI ACGGC 4 cut(s) 42, 263, 280, 491
BciT130I CCWGG 1 cut(s) 326
BcoDI GTCTC 3 cut(s) 201, 334, 618
BfaI CTAG 2 cut(s) 800, 840
BfrI CTTAAG 1 cut(s) 814
Bme1390I CCNGG 1 cut(s) 326
Bme18I GGWCC 1 cut(s) 154
BmgT120I GGNCC 1 cut(s) 154
BmiI GGNNCC 2 cut(s) 156, 245
BmrFI CCNGG 1 cut(s) 326
BmsI GCATC 1 cut(s) 818
BpiI GAAGAC 3 cut(s) 328, 428, 842
BsaAI YACGTR 1 cut(s) 187
BsaHI GRCGYC 1 cut(s) 461
BsaI GGTCTC 2 cut(s) 201, 334
BsaJI CCNNGG 1 cut(s) 150
BsaWI WCCGGW 1 cut(s) 240
Bsc4I CCNNNNNNNGG 1 cut(s) 479
Bse118I RCCGGY 2 cut(s) 240, 782
Bse21I CCTNAGG 1 cut(s) 823
Bse3DI GCAATG 2 cut(s) 300, 723
BseBI CCWGG 1 cut(s) 326
BseDI CCNNGG 1 cut(s) 150
BseGI GGATG 3 cut(s) 591, 700, 833
BseLI CCNNNNNNNGG 1 cut(s) 479
BseMI GCAATG 2 cut(s) 300, 723
BseMII CTCAG 2 cut(s) 333, 666
BseXI GCAGC 7 cut(s) 19, 26, 87, 282, 409, 412, 653
BsgI GTGCAG 1 cut(s) 33
Bsh1236I CGCG 1 cut(s) 504
Bsh1285I CGRYCG 1 cut(s) 787
BshFI GGCC 2 cut(s) 501, 707
BshTI ACCGGT 1 cut(s) 240
BsiEI CGRYCG 1 cut(s) 787
BsiHKAI GWGCWC 1 cut(s) 653
BsiSI CCGG 2 cut(s) 241, 783
BslFI GGGAC 1 cut(s) 140
BslI CCNNNNNNNGG 1 cut(s) 479
BsmAI GTCTC 3 cut(s) 201, 334, 618
BsmFI GGGAC 1 cut(s) 140
BsnI GGCC 2 cut(s) 501, 707
Bso31I GGTCTC 2 cut(s) 201, 334
Bsp1286I GDGCHC 1 cut(s) 653
Bsp143I GATC 2 cut(s) 514, 748
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 9 cut(s) 17, 29, 36, 219, 267, 455, 502, 528, 565
BspANI GGCC 2 cut(s) 501, 707
BspCNI CTCAG 2 cut(s) 332, 665
BspFNI CGCG 1 cut(s) 504
BspLI GGNNCC 2 cut(s) 156, 245
BspPI GGATC 1 cut(s) 743
BspTI CTTAAG 1 cut(s) 814
BspTNI GGTCTC 2 cut(s) 201, 334
BsrDI GCAATG 2 cut(s) 300, 723
BsrFI RCCGGY 2 cut(s) 240, 782
BssAI RCCGGY 2 cut(s) 240, 782
BssECI CCNNGG 1 cut(s) 150
BssMI GATC 2 cut(s) 514, 748
BssNAI GTATAC 1 cut(s) 726
BssNI GRCGYC 1 cut(s) 461
BssT1I CCWWGG 1 cut(s) 150
Bst1107I GTATAC 1 cut(s) 726
Bst2UI CCWGG 1 cut(s) 326
Bst4CI ACNGT 2 cut(s) 427, 482
Bst6I CTCTTC 1 cut(s) 218
BstACI GRCGYC 1 cut(s) 461
BstAFI CTTAAG 1 cut(s) 814
BstAPI GCANNNNNTGC 1 cut(s) 295
BstBAI YACGTR 1 cut(s) 187
BstC8I GCNNGC 3 cut(s) 147, 223, 344
BstDEI CTNAG 3 cut(s) 319, 652, 823
BstDSI CCRYGG 1 cut(s) 150
BstF5I GGATG 3 cut(s) 591, 700, 833
BstFNI CGCG 1 cut(s) 504
BstHHI GCGC 3 cut(s) 300, 397, 506
BstKTI GATC 2 cut(s) 517, 751
BstMAI GTCTC 3 cut(s) 201, 334, 618
BstMBI GATC 2 cut(s) 514, 748
BstMCI CGRYCG 1 cut(s) 787
BstMWI GCNNNNNNNGC 7 cut(s) 20, 29, 35, 81, 295, 501, 713
BstNI CCWGG 1 cut(s) 326
BstSCI CCNGG 1 cut(s) 324
BstUI CGCG 1 cut(s) 504
BstV1I GCAGC 7 cut(s) 19, 26, 87, 282, 409, 412, 653
BstV2I GAAGAC 3 cut(s) 328, 428, 842
BstZ17I GTATAC 1 cut(s) 726
Bsu36I CCTNAGG 1 cut(s) 823
BsuRI GGCC 2 cut(s) 501, 707
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 3 cut(s) 591, 700, 833
BtsI GCAGTG 1 cut(s) 711
BtsIMutI CAGTG 2 cut(s) 16, 711
Cac8I GCNNGC 3 cut(s) 147, 223, 344
CfoI GCGC 3 cut(s) 300, 397, 506
Cfr10I RCCGGY 2 cut(s) 240, 782
Cfr13I GGNCC 1 cut(s) 154
CseI GACGC 1 cut(s) 469
Csp6I GTAC 2 cut(s) 188, 819
CspAI ACCGGT 1 cut(s) 240
CspCI CAANNNNNGTGG 2 cut(s) 664, 699
CviAII CATG 4 cut(s) 40, 55, 151, 547
CviQI GTAC 2 cut(s) 188, 819
DdeI CTNAG 3 cut(s) 319, 652, 823
DpnI GATC 2 cut(s) 516, 750
DpnII GATC 2 cut(s) 514, 748
EaeI YGGCCR 1 cut(s) 499
Eam1104I CTCTTC 1 cut(s) 218
EarI CTCTTC 1 cut(s) 218
Eco130I CCWWGG 1 cut(s) 150
Eco31I GGTCTC 2 cut(s) 201, 334
Eco47I GGWCC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 774
Eco81I CCTNAGG 1 cut(s) 823
EcoRII CCWGG 1 cut(s) 324
EcoT14I CCWWGG 1 cut(s) 150
ErhI CCWWGG 1 cut(s) 150
FaeI CATG 4 cut(s) 43, 58, 154, 550
FaqI GGGAC 1 cut(s) 140
FatI CATG 4 cut(s) 39, 54, 150, 546
FauI CCCGC 1 cut(s) 558
FblI GTMKAC 3 cut(s) 282, 537, 725
FokI GGATG 3 cut(s) 598, 707, 840
FspBI CTAG 2 cut(s) 800, 840
FspI TGCGCA 1 cut(s) 299
GlaI GCGC 3 cut(s) 299, 396, 505
HaeIII GGCC 2 cut(s) 501, 707
HapII CCGG 2 cut(s) 241, 783
HgaI GACGC 1 cut(s) 469
HhaI GCGC 3 cut(s) 300, 397, 506
Hin1I GRCGYC 1 cut(s) 461
Hin1II CATG 4 cut(s) 43, 58, 154, 550
Hin6I GCGC 3 cut(s) 298, 395, 504
HinP1I GCGC 3 cut(s) 298, 395, 504
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HinfI GANTC 5 cut(s) 365, 522, 553, 576, 600
HpaII CCGG 2 cut(s) 241, 783
HphI GGTGA 7 cut(s) 208, 225, 374, 462, 469, 517, 562
Hpy166II GTNNAC 4 cut(s) 190, 283, 538, 726
Hpy188I TCNGA 6 cut(s) 199, 206, 514, 521, 655, 789
Hpy188III TCNNGA 2 cut(s) 49, 752
Hpy8I GTNNAC 4 cut(s) 190, 283, 538, 726
Hpy99I CGWCG 3 cut(s) 263, 266, 284
HpyAV CCTTC 2 cut(s) 567, 749
HpyCH4III ACNGT 2 cut(s) 427, 482
HpyCH4IV ACGT 2 cut(s) 186, 778
HpyCH4V TGCA 7 cut(s) 14, 145, 225, 289, 342, 716, 831
HpyF10VI GCNNNNNNNGC 7 cut(s) 20, 29, 35, 81, 295, 501, 713
HpyF3I CTNAG 3 cut(s) 319, 652, 823
HpySE526I ACGT 2 cut(s) 186, 778
Hsp92I GRCGYC 1 cut(s) 461
Hsp92II CATG 4 cut(s) 43, 58, 154, 550
HspAI GCGC 3 cut(s) 298, 395, 504
Kzo9I GATC 2 cut(s) 514, 748
Lsp1109I GCAGC 7 cut(s) 19, 26, 87, 282, 409, 412, 653
LweI GCATC 1 cut(s) 818
MaeI CTAG 2 cut(s) 800, 840
MaeII ACGT 2 cut(s) 186, 778
MaeIII GTNAC 1 cut(s) 457
MalI GATC 2 cut(s) 516, 750
MboI GATC 2 cut(s) 514, 748
MhlI GDGCHC 1 cut(s) 653
MluCI AATT 2 cut(s) 159, 357
MlyI GAGTC 1 cut(s) 516
MmeI TCCRAC 1 cut(s) 767
MnlI CCTC 8 cut(s) 74, 212, 221, 402, 541, 657, 718, 821
MseI TTAA 3 cut(s) 356, 774, 815
MslI CAYNNNNRTG 1 cut(s) 716
MspA1I CMGCKG 1 cut(s) 17
MspCI CTTAAG 1 cut(s) 814
MspI CCGG 2 cut(s) 241, 783
MspR9I CCNGG 1 cut(s) 326
MvaI CCWGG 1 cut(s) 326
MvnI CGCG 1 cut(s) 504
MwoI GCNNNNNNNGC 7 cut(s) 20, 29, 35, 81, 295, 501, 713
NcoI CCATGG 1 cut(s) 150
NdeII GATC 2 cut(s) 514, 748
NlaIII CATG 4 cut(s) 43, 58, 154, 550
NlaIV GGNNCC 2 cut(s) 156, 245
NmuCI GTSAC 1 cut(s) 457
NsbI TGCGCA 1 cut(s) 299
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PfeI GAWTC 4 cut(s) 365, 553, 576, 600
PinAI ACCGGT 1 cut(s) 240
PleI GAGTC 1 cut(s) 516
PpsI GAGTC 1 cut(s) 516
Ppu21I YACGTR 1 cut(s) 187
Psp6I CCWGG 1 cut(s) 324
PspGI CCWGG 1 cut(s) 324
PspN4I GGNNCC 2 cut(s) 156, 245
PspPI GGNCC 1 cut(s) 154
RsaI GTAC 2 cut(s) 189, 820
RsaNI GTAC 2 cut(s) 188, 819
RseI CAYNNNNRTG 1 cut(s) 716
SalI GTCGAC 1 cut(s) 281
SaqAI TTAA 3 cut(s) 356, 774, 815
Sau3AI GATC 2 cut(s) 514, 748
Sau96I GGNCC 1 cut(s) 154
SchI GAGTC 1 cut(s) 516
ScrFI CCNGG 1 cut(s) 326
SduI GDGCHC 1 cut(s) 653
SfaNI GCATC 1 cut(s) 818
SinI GGWCC 1 cut(s) 154
SmiMI CAYNNNNRTG 1 cut(s) 716
SmlI CTYRAG 1 cut(s) 814
SmoI CTYRAG 1 cut(s) 814
Sse9I AATT 2 cut(s) 159, 357
SsiI CCGC 9 cut(s) 17, 29, 36, 219, 267, 455, 502, 528, 565
SspMI CTAG 2 cut(s) 800, 840
StyD4I CCNGG 1 cut(s) 324
StyI CCWWGG 1 cut(s) 150
TaaI ACNGT 2 cut(s) 427, 482
TaiI ACGT 2 cut(s) 189, 781
TaqI TCGA 2 cut(s) 282, 390
TasI AATT 2 cut(s) 159, 357
TauI GCSGC 4 cut(s) 32, 38, 270, 504
TfiI GAWTC 4 cut(s) 365, 553, 576, 600
Tru1I TTAA 3 cut(s) 356, 774, 815
Tru9I TTAA 3 cut(s) 356, 774, 815
TscAI CASTG 2 cut(s) 16, 718
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 7 cut(s) 14, 32, 75, 295, 397, 400, 641
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 3 cut(s) 154, 357, 437
TspGWI ACGGA 2 cut(s) 34, 523
TspRI CASTG 2 cut(s) 16, 718
Vha464I CTTAAG 1 cut(s) 814
VpaK11BI GGWCC 1 cut(s) 154
XmiI GTMKAC 3 cut(s) 282, 537, 725
XspI CTAG 2 cut(s) 800, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.