Prupe.2G267400_v2.0.a1

Acetyltransferase (GNAT) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0009063
Physical Location & Seq
Reverse (-)
27326921 .. 27328846
1926 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G267400.1

Sequence Viewer

Length: 810 bp
ATGGAGCTAAAATGGGTGAGCAGAAGAAGCAGAGGCGGCAAAATCCAAATGGAAAAAACCATGAAAACGCCATCAGAATCGAAACCAAAAGCACCAGCAACCCTGCAAGCCCTGGTCCCAGTTTTCATATCCACAAACCCATCCCATGTGAACCCAGATGACCTCAGTGACCTCTTCATCGCGTGCAACCTCTCATGCCACCGTTTCCCCAATTACGTGGACGCCGGCGGTGGCCGCTGCGTCGTTGAAGCTGTGGACTTGCACAAGCTGCGCGTCGCTCTCTCCCACAGTTCAGTCTTGGTCTCAGTCTTCTGCAAGCCAAATGATGTGATTGGTTGCTCTTCATCATTTTTGAAGGAAAAGCAGCAGCAGCAGAAGAAGAAGATAGTGGGTTTTGGAGAGTTGTTGCAGAATGTGGTGATGCCTGTTACCCCATTGAACAGTCAATTGGTTGGGTTTGGGCGTGCAGTTTCTGATCTTGGACTCACTGCCTCCATCTACGATGTCATGGTGCTTCCTTCATTGCGGGGAATGGGAATTGGCAGGATGATAGTTAAAAGAATCATAAGAATGCTCACAAGTAGAGACATCTATGACATAGCAGCCCTTTGCTCAGAGAATGAGAGATCATTCTTCAAAGTGTGCGGTTTTGGGGATGACATTTTAGGCTCCACTGCAATGATGTATACGAGGAGTAGCGTTTCAACTAATCCTCAAGACAACCAGATTGTTAAACGTGCCGGTCGAAAGCTATTGTTAGTTCCACCACTTTCGAAGACCTTGCCATATTCCAAGACCATGAAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

270

Amino Acids

29.58

Weight (kDa)

9.68

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 686
AccII CGCG 2 cut(s) 182, 273
AciI CCGC 5 cut(s) 36, 228, 235, 526, 645
AcoI YGGCCR 1 cut(s) 232
AcyI GRCGYC 1 cut(s) 222
AgsI TTSAA 5 cut(s) 248, 355, 439, 637, 705
AjnI CCWGG 1 cut(s) 111
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AluBI AGCT 4 cut(s) 7, 251, 268, 751
AluI AGCT 4 cut(s) 7, 251, 268, 751
Alw26I GTCTC 2 cut(s) 307, 579
AlwNI CAGNNNCTG 1 cut(s) 473
AoxI GGCC 1 cut(s) 232
ApeKI GCWGC 6 cut(s) 237, 268, 364, 367, 370, 602
AspLEI GCGC 1 cut(s) 273
AspS9I GGNCC 1 cut(s) 115
AsuHPI GGTGA 2 cut(s) 28, 430
AsuII TTCGAA 1 cut(s) 773
AvaII GGWCC 1 cut(s) 115
BbsI GAAGAC 2 cut(s) 301, 782
BbvI GCAGC 6 cut(s) 224, 255, 376, 379, 382, 614
BccI CCATC 3 cut(s) 79, 148, 503
BcgI CGANNNNNNTGC 2 cut(s) 763, 797
BciT130I CCWGG 1 cut(s) 113
BcoDI GTCTC 2 cut(s) 307, 579
BisI GCNGC 8 cut(s) 37, 235, 238, 269, 365, 368, 371, 603
BlsI GCNGC 8 cut(s) 38, 236, 239, 270, 366, 369, 372, 604
Bme1390I CCNGG 1 cut(s) 113
Bme18I GGWCC 1 cut(s) 115
BmgT120I GGNCC 1 cut(s) 115
BmiI GGNNCC 2 cut(s) 117, 670
BmrFI CCNGG 1 cut(s) 113
BmrI ACTGGG 1 cut(s) 113
BmsI GCATC 1 cut(s) 411
BmuI ACTGGG 1 cut(s) 113
BpiI GAAGAC 2 cut(s) 301, 782
Bpu14I TTCGAA 1 cut(s) 773
BpuEI CTTGAG 1 cut(s) 699
BsaAI YACGTR 1 cut(s) 217
BsaHI GRCGYC 1 cut(s) 222
BsaI GGTCTC 1 cut(s) 307
BsaJI CCNNGG 1 cut(s) 111
Bse118I RCCGGY 2 cut(s) 224, 740
Bse1I ACTGG 1 cut(s) 119
Bse3DI GCAATG 2 cut(s) 521, 684
BseBI CCWGG 1 cut(s) 113
BseDI CCNNGG 1 cut(s) 111
BseGI GGATG 3 cut(s) 140, 552, 661
BseMI GCAATG 2 cut(s) 521, 684
BseMII CTCAG 3 cut(s) 178, 318, 627
BseNI ACTGG 1 cut(s) 119
BseRI GAGGAG 1 cut(s) 706
BseXI GCAGC 6 cut(s) 224, 255, 376, 379, 382, 614
BsgI GTGCAG 1 cut(s) 486
Bsh1236I CGCG 2 cut(s) 182, 273
Bsh1285I CGRYCG 1 cut(s) 745
BshFI GGCC 1 cut(s) 234
BsiEI CGRYCG 1 cut(s) 745
BsiSI CCGG 2 cut(s) 225, 741
BslFI GGGAC 1 cut(s) 101
BsmAI GTCTC 2 cut(s) 307, 579
BsmFI GGGAC 1 cut(s) 101
BsmI GAATGC 1 cut(s) 576
BsnI GGCC 1 cut(s) 234
Bso31I GGTCTC 1 cut(s) 307
Bsp119I TTCGAA 1 cut(s) 773
Bsp143I GATC 2 cut(s) 475, 626
BspACI CCGC 5 cut(s) 36, 228, 235, 526, 645
BspANI GGCC 1 cut(s) 234
BspCNI CTCAG 3 cut(s) 177, 317, 626
BspFNI CGCG 2 cut(s) 182, 273
BspHI TCATGA 1 cut(s) 806
BspLI GGNNCC 2 cut(s) 117, 670
BspQI GCTCTTC 1 cut(s) 346
BspT104I TTCGAA 1 cut(s) 773
BspTNI GGTCTC 1 cut(s) 307
BsrDI GCAATG 2 cut(s) 521, 684
BsrFI RCCGGY 2 cut(s) 224, 740
BsrI ACTGG 1 cut(s) 119
BssAI RCCGGY 2 cut(s) 224, 740
BssECI CCNNGG 1 cut(s) 111
BssMI GATC 2 cut(s) 475, 626
BssNAI GTATAC 1 cut(s) 687
BssNI GRCGYC 1 cut(s) 222
Bst1107I GTATAC 1 cut(s) 687
Bst2UI CCWGG 1 cut(s) 113
Bst4CI ACNGT 3 cut(s) 203, 290, 443
Bst6I CTCTTC 2 cut(s) 179, 346
BstACI GRCGYC 1 cut(s) 222
BstAPI GCANNNNNTGC 1 cut(s) 268
BstBAI YACGTR 1 cut(s) 217
BstBI TTCGAA 1 cut(s) 773
BstC8I GCNNGC 5 cut(s) 108, 184, 226, 317, 465
BstDEI CTNAG 3 cut(s) 164, 304, 613
BstF5I GGATG 3 cut(s) 140, 552, 661
BstFNI CGCG 2 cut(s) 182, 273
BstHHI GCGC 1 cut(s) 273
BstKTI GATC 2 cut(s) 478, 629
BstMAI GTCTC 2 cut(s) 307, 579
BstMBI GATC 2 cut(s) 475, 626
BstMCI CGRYCG 1 cut(s) 745
BstMWI GCNNNNNNNGC 5 cut(s) 27, 36, 234, 268, 370
BstNI CCWGG 1 cut(s) 113
BstSCI CCNGG 1 cut(s) 111
BstUI CGCG 2 cut(s) 182, 273
BstV1I GCAGC 6 cut(s) 224, 255, 376, 379, 382, 614
BstV2I GAAGAC 2 cut(s) 301, 782
BstXI CCANNNNNNTGG 1 cut(s) 217
BstZ17I GTATAC 1 cut(s) 687
BsuRI GGCC 1 cut(s) 234
BtgZI GCGATG 1 cut(s) 163
BtsCI GGATG 3 cut(s) 140, 552, 661
BtsI GCAGTG 2 cut(s) 486, 672
BtsIMutI CAGTG 3 cut(s) 172, 486, 672
Cac8I GCNNGC 5 cut(s) 108, 184, 226, 317, 465
CaiI CAGNNNCTG 1 cut(s) 473
CciI TCATGA 1 cut(s) 806
CfoI GCGC 1 cut(s) 273
Cfr10I RCCGGY 2 cut(s) 224, 740
Cfr13I GGNCC 1 cut(s) 115
CseI GACGC 3 cut(s) 229, 230, 262
CviAII CATG 6 cut(s) 61, 146, 195, 508, 799, 807
CviJI RGCY 9 cut(s) 7, 110, 234, 251, 268, 319, 605, 669, 751
CviKI_1 RGCY 9 cut(s) 7, 110, 234, 251, 268, 319, 605, 669, 751
DdeI CTNAG 3 cut(s) 164, 304, 613
DpnI GATC 2 cut(s) 477, 628
DpnII GATC 2 cut(s) 475, 626
EaeI YGGCCR 1 cut(s) 232
Eam1104I CTCTTC 2 cut(s) 179, 346
EarI CTCTTC 2 cut(s) 179, 346
Eco31I GGTCTC 1 cut(s) 307
Eco47I GGWCC 1 cut(s) 115
EcoRII CCWGG 1 cut(s) 111
FaeI CATG 6 cut(s) 64, 149, 198, 511, 802, 810
FaqI GGGAC 1 cut(s) 101
FatI CATG 6 cut(s) 60, 145, 194, 507, 798, 806
FauI CCCGC 1 cut(s) 519
FblI GTMKAC 1 cut(s) 686
Fnu4HI GCNGC 8 cut(s) 37, 235, 238, 269, 365, 368, 371, 603
FokI GGATG 3 cut(s) 127, 559, 668
Fsp4HI GCNGC 8 cut(s) 37, 235, 238, 269, 365, 368, 371, 603
GlaI GCGC 1 cut(s) 272
GluI GCNGC 8 cut(s) 37, 235, 238, 269, 365, 368, 371, 603
HaeIII GGCC 1 cut(s) 234
HapII CCGG 2 cut(s) 225, 741
HgaI GACGC 3 cut(s) 229, 230, 262
HhaI GCGC 1 cut(s) 273
Hin1I GRCGYC 1 cut(s) 222
Hin1II CATG 6 cut(s) 64, 149, 198, 511, 802, 810
Hin6I GCGC 1 cut(s) 271
HinP1I GCGC 1 cut(s) 271
HinfI GANTC 3 cut(s) 77, 483, 561
HpaII CCGG 2 cut(s) 225, 741
HphI GGTGA 2 cut(s) 28, 430
Hpy166II GTNNAC 4 cut(s) 151, 220, 256, 687
Hpy188I TCNGA 3 cut(s) 76, 475, 616
Hpy188III TCNNGA 2 cut(s) 716, 807
Hpy8I GTNNAC 4 cut(s) 151, 220, 256, 687
Hpy99I CGWCG 2 cut(s) 245, 278
HpyAV CCTTC 2 cut(s) 349, 528
HpyCH4III ACNGT 3 cut(s) 203, 290, 443
HpyCH4IV ACGT 2 cut(s) 216, 736
HpyCH4V TGCA 7 cut(s) 106, 186, 262, 315, 409, 467, 677
HpyF10VI GCNNNNNNNGC 5 cut(s) 27, 36, 234, 268, 370
HpyF3I CTNAG 3 cut(s) 164, 304, 613
HpySE526I ACGT 2 cut(s) 216, 736
Hsp92I GRCGYC 1 cut(s) 222
Hsp92II CATG 6 cut(s) 64, 149, 198, 511, 802, 810
HspAI GCGC 1 cut(s) 271
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Kzo9I GATC 2 cut(s) 475, 626
LguI GCTCTTC 1 cut(s) 346
LmnI GCTCC 2 cut(s) 4, 674
Lsp1109I GCAGC 6 cut(s) 224, 255, 376, 379, 382, 614
LweI GCATC 1 cut(s) 411
MaeII ACGT 2 cut(s) 216, 736
MaeIII GTNAC 2 cut(s) 167, 427
MalI GATC 2 cut(s) 477, 628
MboI GATC 2 cut(s) 475, 626
MboII GAAGA 9 cut(s) 36, 166, 301, 333, 388, 391, 394, 625, 787
MfeI CAATTG 1 cut(s) 446
MluCI AATT 3 cut(s) 211, 446, 537
MlyI GAGTC 1 cut(s) 477
MnlI CCTC 7 cut(s) 26, 173, 182, 200, 502, 684, 723
MreI CGCCGGCG 1 cut(s) 224
MroNI GCCGGC 1 cut(s) 224
MseI TTAA 2 cut(s) 555, 732
MslI CAYNNNNRTG 2 cut(s) 569, 677
MspA1I CMGCKG 1 cut(s) 237
MspI CCGG 2 cut(s) 225, 741
MspR9I CCNGG 1 cut(s) 113
MunI CAATTG 1 cut(s) 446
Mva1269I GAATGC 1 cut(s) 576
MvaI CCWGG 1 cut(s) 113
MvnI CGCG 2 cut(s) 182, 273
MwoI GCNNNNNNNGC 5 cut(s) 27, 36, 234, 268, 370
NaeI GCCGGC 1 cut(s) 226
NdeII GATC 2 cut(s) 475, 626
NgoMIV GCCGGC 1 cut(s) 224
NlaIII CATG 6 cut(s) 64, 149, 198, 511, 802, 810
NlaIV GGNNCC 2 cut(s) 117, 670
NmuCI GTSAC 1 cut(s) 167
NspV TTCGAA 1 cut(s) 773
PagI TCATGA 1 cut(s) 806
PciSI GCTCTTC 1 cut(s) 346
PcsI WCGNNNNNNNCGW 1 cut(s) 742
PctI GAATGC 1 cut(s) 576
PdiI GCCGGC 1 cut(s) 226
PfeI GAWTC 2 cut(s) 77, 561
PkrI GCNGC 8 cut(s) 38, 236, 239, 270, 366, 369, 372, 604
PleI GAGTC 1 cut(s) 477
PpsI GAGTC 1 cut(s) 477
Ppu21I YACGTR 1 cut(s) 217
Psp6I CCWGG 1 cut(s) 111
PspGI CCWGG 1 cut(s) 111
PspN4I GGNNCC 2 cut(s) 117, 670
PspPI GGNCC 1 cut(s) 115
PstNI CAGNNNCTG 1 cut(s) 473
RseI CAYNNNNRTG 2 cut(s) 569, 677
SapI GCTCTTC 1 cut(s) 346
SaqAI TTAA 2 cut(s) 555, 732
SatI GCNGC 8 cut(s) 37, 235, 238, 269, 365, 368, 371, 603
Sau3AI GATC 2 cut(s) 475, 626
Sau96I GGNCC 1 cut(s) 115
SchI GAGTC 1 cut(s) 477
ScrFI CCNGG 1 cut(s) 113
SfaNI GCATC 1 cut(s) 411
SfuI TTCGAA 1 cut(s) 773
SgrAI CRCCGGYG 1 cut(s) 224
SinI GGWCC 1 cut(s) 115
SmiMI CAYNNNNRTG 2 cut(s) 569, 677
SmlI CTYRAG 1 cut(s) 714
SmoI CTYRAG 1 cut(s) 714
Sse9I AATT 3 cut(s) 211, 446, 537
SsiI CCGC 5 cut(s) 36, 228, 235, 526, 645
StyD4I CCNGG 1 cut(s) 111
TaaI ACNGT 3 cut(s) 203, 290, 443
TaiI ACGT 2 cut(s) 219, 739
TaqI TCGA 3 cut(s) 80, 745, 773
TasI AATT 3 cut(s) 211, 446, 537
TauI GCSGC 2 cut(s) 39, 237
TfiI GAWTC 2 cut(s) 77, 561
Tru1I TTAA 2 cut(s) 555, 732
Tru9I TTAA 2 cut(s) 555, 732
TscAI CASTG 3 cut(s) 172, 493, 679
TseFI GTSAC 1 cut(s) 167
TseI GCWGC 6 cut(s) 237, 268, 364, 367, 370, 602
Tsp45I GTSAC 1 cut(s) 167
TspDTI ATGAA 5 cut(s) 77, 115, 166, 333, 510
TspRI CASTG 3 cut(s) 172, 493, 679
VpaK11BI GGWCC 1 cut(s) 115
XmiI GTMKAC 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.