Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0009063

Physical Location & Seq

Genomic Coordinates Reverse (-)

19916391 .. 19919019

Gene Structure 2629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g26320.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGGAGGCTGCGACGCCCATGAACATAGTAGAGTGTCATTCATGCACCTCCATGGAGCTAAAATGGGCAAGTTCCCGAGGCAAAACCCAAGTGCAAAACATGAAAACACCTTCAAAATCAAAAGCACCAGCAACACTTCGTACCTCGGTCCCTGTGTTTATATCCACAAACCCATCACACGTAAAACCAGACGACCTCATTGACCTATACAGCGCCTGCAATCTCAACGGCCACCGGTTCCCGGGTTACGTGGACGGCAAAGATGGCTGCCGTGAAGTGGAAGGTATTGATGTGAACAAGCTACGTGTGGCTCTTTCACACAGTGAAGTCCTGGTGTCTGTCTTCTGCAAACCAAATGATGTAGTTAGCAAATCTTCATCATCATTTTCGCAAAAGAATCGAAAGAAGCTGAATATTACCGAGGGTTTAGGAGAATTGTTCGAAAGGGTGGTGATGCCGGTGACACCATTTAACAGTCAACTGGTTGGTTTTGGCCGAGCTGTTTCTGATCAAGGATTGACAGCCTCCATCTACGATGTTATGGTTATTCCTTCATTGCAGGGTATGGGAATTGGCAAGATGATAGTTAAAAGAATCATAAGAATACTCACGAGTAGAGACATTTATGACATAGCAGCACTTTGCTCAGAAAATGAGAGCTCATTCTTCAAAGCATGTGGTTTTGGTGATGACATTCTGTGCTCCACAGCAATGATGTATACAAGAACTGCTAGTGGTTCAACTAATCTCGAAGGACAGATGGTTAAGCGCGCAGGTCGAAAGCTACTGTTGGTTCCACCGTTTTTGAAGACCTTACCCTACTCCAAGTCCAAAACCATACAATCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

284

Amino Acids

30.92

Weight (kDa)

9.23

Isoelectric Point (pI)

43.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	155 - 228	2.5e-08	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	159 - 228	6.8e-06	Acetyltransferase (GNAT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19985 AT4G19985 AT4G19985 AT4G19985 AT4G19985 AT4G19985 AT4G19985
fragaria_vesca	FvH4_7g26320
malus_domestica	MD07G1238600.v1.1
prunus_persica	Prupe.2G267400_v2.0.a1
pyrus_communis	pycom07g21460
rosa_chinensis	RchiOBHm_Chr1g0372781
rosa_multiflora	Rmu_co8249425.1_g000001 Rmu_sc0009717.1_g000005 Rmu_sc0032706.1_g000001
rosa_roxburghii	Rroxscaffold_4G00284690
rosa_rugosa	Rorug01G0374300
rosa_samantha	Rh1BG346600 Rh1BG346700 Rh1CG359800 Rh1CG360000
rosa_wichuraiana	Rw1G033720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	764
AccI	GTMKAC	1 cut(s)	719
AccII	CGCG	1 cut(s)	771
AcoI	YGGCCR	2 cut(s)	229, 493
AcyI	GRCGYC	1 cut(s)	14
AdeI	CACNNNGTG	1 cut(s)	323
AfaI	GTAC	1 cut(s)	142
AfiI	CCNNNNNNNGG	2 cut(s)	241, 277
AflIII	ACRYGT	2 cut(s)	178, 304
AgeI	ACCGGT	1 cut(s)	234
AgsI	TTSAA	4 cut(s)	114, 670, 741, 808
AjnI	CCWGG	1 cut(s)	330
AluBI	AGCT	6 cut(s)	58, 301, 409, 500, 660, 784
AluI	AGCT	6 cut(s)	58, 301, 409, 500, 660, 784
Alw21I	GWGCWC	2 cut(s)	662, 704
Alw26I	GTCTC	1 cut(s)	612
AlwNI	CAGNNNCTG	1 cut(s)	216
Ama87I	CYCGRG	2 cut(s)	75, 241
AoxI	GGCC	2 cut(s)	229, 493
ApeKI	GCWGC	3 cut(s)	8, 267, 635
AsiGI	ACCGGT	1 cut(s)	234
AspLEI	GCGC	3 cut(s)	215, 771, 773
AspS9I	GGNCC	1 cut(s)	148
AsuC2I	CCSGG	2 cut(s)	242, 243
AsuHPI	GGTGA	3 cut(s)	463, 472, 698
AsuII	TTCGAA	1 cut(s)	441
AvaI	CYCGRG	2 cut(s)	75, 241
AvaII	GGWCC	1 cut(s)	148
BanII	GRGCYC	1 cut(s)	662
BauI	CACGAG	1 cut(s)	610
BbsI	GAAGAC	2 cut(s)	334, 815
Bbv12I	GWGCWC	2 cut(s)	662, 704
BbvI	GCAGC	2 cut(s)	254, 647
BccI	CCATC	4 cut(s)	181, 257, 536, 754
BceAI	ACGGC	3 cut(s)	244, 255, 271
BcgI	CGANNNNNNTGC	2 cut(s)	380, 414
BciT130I	CCWGG	1 cut(s)	332
BclI	TGATCA	1 cut(s)	508
BcnI	CCSGG	2 cut(s)	242, 243
BcoDI	GTCTC	1 cut(s)	612
BfaI	CTAG	1 cut(s)	732
BfoI	RGCGCY	1 cut(s)	216
BfuAI	ACCTGC	1 cut(s)	764
BisI	GCNGC	3 cut(s)	9, 268, 636
BlsI	GCNGC	3 cut(s)	10, 269, 637
Bme1390I	CCNGG	3 cut(s)	242, 243, 332
Bme18I	GGWCC	1 cut(s)	148
BmeT110I	CYCGRG	2 cut(s)	75, 241
BmgT120I	GGNCC	1 cut(s)	148
BmiI	GGNNCC	3 cut(s)	150, 239, 795
BmrFI	CCNGG	3 cut(s)	242, 243, 332
BmsI	GCATC	1 cut(s)	444
BpiI	GAAGAC	2 cut(s)	334, 815
Bpu14I	TTCGAA	1 cut(s)	441
BpuMI	CCSGG	2 cut(s)	242, 243
BsaAI	YACGTR	3 cut(s)	181, 250, 305
BsaHI	GRCGYC	1 cut(s)	14
BsaJI	CCNNGG	5 cut(s)	51, 76, 144, 241, 420
BsaWI	WCCGGW	1 cut(s)	234
Bsc4I	CCNNNNNNNGG	2 cut(s)	241, 277
Bse118I	RCCGGY	2 cut(s)	234, 457
Bse1I	ACTGG	1 cut(s)	486
Bse3DI	GCAATG	2 cut(s)	554, 717
BseBI	CCWGG	1 cut(s)	332
BseDI	CCNNGG	5 cut(s)	51, 76, 144, 241, 420
BseLI	CCNNNNNNNGG	2 cut(s)	241, 277
BseMI	GCAATG	2 cut(s)	554, 717
BseMII	CTCAG	1 cut(s)	660
BseNI	ACTGG	1 cut(s)	486
BsePI	GCGCGC	1 cut(s)	769
BseXI	GCAGC	2 cut(s)	254, 647
Bsh1236I	CGCG	1 cut(s)	771
BshFI	GGCC	2 cut(s)	231, 495
BshTI	ACCGGT	1 cut(s)	234
BsiHKAI	GWGCWC	2 cut(s)	662, 704
BsiHKCI	CYCGRG	2 cut(s)	75, 241
BsiSI	CCGG	3 cut(s)	235, 242, 458
BslFI	GGGAC	1 cut(s)	134
BslI	CCNNNNNNNGG	2 cut(s)	241, 277
BsmAI	GTCTC	1 cut(s)	612
BsmFI	GGGAC	1 cut(s)	134
BsnI	GGCC	2 cut(s)	231, 495
BsoBI	CYCGRG	2 cut(s)	75, 241
Bsp119I	TTCGAA	1 cut(s)	441
Bsp1286I	GDGCHC	2 cut(s)	662, 704
Bsp143I	GATC	1 cut(s)	508
Bsp19I	CCATGG	1 cut(s)	51
BspANI	GGCC	2 cut(s)	231, 495
BspCNI	CTCAG	1 cut(s)	659
BspFNI	CGCG	1 cut(s)	771
BspLI	GGNNCC	3 cut(s)	150, 239, 795
BspMI	ACCTGC	1 cut(s)	764
BspT104I	TTCGAA	1 cut(s)	441
BsrDI	GCAATG	2 cut(s)	554, 717
BsrFI	RCCGGY	2 cut(s)	234, 457
BsrI	ACTGG	1 cut(s)	486
BssAI	RCCGGY	2 cut(s)	234, 457
BssECI	CCNNGG	5 cut(s)	51, 76, 144, 241, 420
BssHII	GCGCGC	1 cut(s)	769
BssMI	GATC	1 cut(s)	508
BssNAI	GTATAC	1 cut(s)	720
BssNI	GRCGYC	1 cut(s)	14
BssSI	CACGAG	1 cut(s)	610
BssT1I	CCWWGG	1 cut(s)	51
Bst1107I	GTATAC	1 cut(s)	720
Bst2BI	CACGAG	1 cut(s)	610
Bst2UI	CCWGG	1 cut(s)	332
Bst4CI	ACNGT	4 cut(s)	323, 476, 789, 801
BstACI	GRCGYC	1 cut(s)	14
BstBAI	YACGTR	3 cut(s)	181, 250, 305
BstBI	TTCGAA	1 cut(s)	441
BstC8I	GCNNGC	2 cut(s)	217, 771
BstDEI	CTNAG	1 cut(s)	646
BstDSI	CCRYGG	1 cut(s)	51
BstFNI	CGCG	1 cut(s)	771
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	3 cut(s)	215, 771, 773
BstKTI	GATC	1 cut(s)	511
BstMAI	GTCTC	1 cut(s)	612
BstMBI	GATC	1 cut(s)	508
BstMWI	GCNNNNNNNGC	1 cut(s)	264
BstNI	CCWGG	1 cut(s)	332
BstNSI	RCATGY	1 cut(s)	678
BstSCI	CCNGG	3 cut(s)	240, 241, 330
BstUI	CGCG	1 cut(s)	771
BstV1I	GCAGC	2 cut(s)	254, 647
BstV2I	GAAGAC	2 cut(s)	334, 815
BstZ17I	GTATAC	1 cut(s)	720
BsuRI	GGCC	2 cut(s)	231, 495
BtgI	CCRYGG	1 cut(s)	51
BtsIMutI	CAGTG	1 cut(s)	328
BveI	ACCTGC	1 cut(s)	764
Cac8I	GCNNGC	2 cut(s)	217, 771
CaiI	CAGNNNCTG	1 cut(s)	216
CfoI	GCGC	3 cut(s)	215, 771, 773
Cfr10I	RCCGGY	2 cut(s)	234, 457
Cfr13I	GGNCC	1 cut(s)	148
Cfr9I	CCCGGG	1 cut(s)	241
CseI	GACGC	1 cut(s)	22
Csp6I	GTAC	1 cut(s)	141
CspAI	ACCGGT	1 cut(s)	234
CspCI	CAANNNNNGTGG	4 cut(s)	658, 693, 786, 821
CviAII	CATG	5 cut(s)	19, 42, 52, 100, 675
CviQI	GTAC	1 cut(s)	141
DdeI	CTNAG	1 cut(s)	646
DpnI	GATC	1 cut(s)	510
DpnII	GATC	1 cut(s)	508
DraIII	CACNNNGTG	1 cut(s)	323
EaeI	YGGCCR	2 cut(s)	229, 493
Ecl136II	GAGCTC	1 cut(s)	660
Eco130I	CCWWGG	1 cut(s)	51
Eco24I	GRGCYC	1 cut(s)	662
Eco47I	GGWCC	1 cut(s)	148
Eco53kI	GAGCTC	1 cut(s)	660
Eco88I	CYCGRG	2 cut(s)	75, 241
EcoICRI	GAGCTC	1 cut(s)	660
EcoRII	CCWGG	1 cut(s)	330
EcoT14I	CCWWGG	1 cut(s)	51
EcoT38I	GRGCYC	1 cut(s)	662
ErhI	CCWWGG	1 cut(s)	51
FaeI	CATG	5 cut(s)	22, 45, 55, 103, 678
FaqI	GGGAC	1 cut(s)	134
FatI	CATG	5 cut(s)	18, 41, 51, 99, 674
FbaI	TGATCA	1 cut(s)	508
FblI	GTMKAC	1 cut(s)	719
Fnu4HI	GCNGC	3 cut(s)	9, 268, 636
FriOI	GRGCYC	1 cut(s)	662
Fsp4HI	GCNGC	3 cut(s)	9, 268, 636
FspBI	CTAG	1 cut(s)	732
GlaI	GCGC	3 cut(s)	214, 770, 772
GluI	GCNGC	3 cut(s)	9, 268, 636
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	2 cut(s)	231, 495
HapII	CCGG	3 cut(s)	235, 242, 458
HgaI	GACGC	1 cut(s)	22
HhaI	GCGC	3 cut(s)	215, 771, 773
Hin1I	GRCGYC	1 cut(s)	14
Hin1II	CATG	5 cut(s)	22, 45, 55, 103, 678
Hin6I	GCGC	3 cut(s)	213, 769, 771
HinP1I	GCGC	3 cut(s)	213, 769, 771
HincII	GTYRAC	1 cut(s)	479
HindII	GTYRAC	1 cut(s)	479
HinfI	GANTC	2 cut(s)	397, 594
HpaII	CCGG	3 cut(s)	235, 242, 458
HphI	GGTGA	3 cut(s)	463, 472, 698
Hpy166II	GTNNAC	4 cut(s)	253, 295, 479, 720
Hpy188I	TCNGA	2 cut(s)	508, 649
Hpy188III	TCNNGA	3 cut(s)	75, 610, 749
Hpy8I	GTNNAC	4 cut(s)	253, 295, 479, 720
Hpy99I	CGWCG	1 cut(s)	16
HpyAV	CCTTC	4 cut(s)	120, 275, 561, 746
HpyCH4III	ACNGT	4 cut(s)	323, 476, 789, 801
HpyCH4IV	ACGT	3 cut(s)	180, 249, 304
HpyCH4V	TGCA	5 cut(s)	45, 94, 219, 348, 559
HpyF10VI	GCNNNNNNNGC	1 cut(s)	264
HpyF3I	CTNAG	1 cut(s)	646
HpySE526I	ACGT	3 cut(s)	180, 249, 304
Hsp92I	GRCGYC	1 cut(s)	14
Hsp92II	CATG	5 cut(s)	22, 45, 55, 103, 678
HspAI	GCGC	3 cut(s)	213, 769, 771
Ksp22I	TGATCA	1 cut(s)	508
Kzo9I	GATC	1 cut(s)	508
LmnI	GCTCC	2 cut(s)	55, 707
Lsp1109I	GCAGC	2 cut(s)	254, 647
LweI	GCATC	1 cut(s)	444
MaeI	CTAG	1 cut(s)	732
MaeII	ACGT	3 cut(s)	180, 249, 304
MaeIII	GTNAC	2 cut(s)	245, 460
MalI	GATC	1 cut(s)	510
MboI	GATC	1 cut(s)	508
MboII	GAAGA	4 cut(s)	334, 366, 658, 820
MhlI	GDGCHC	2 cut(s)	662, 704
MluCI	AATT	2 cut(s)	434, 570
MnlI	CCTC	6 cut(s)	58, 71, 154, 206, 415, 535
MseI	TTAA	4 cut(s)	471, 588, 765, 850
MslI	CAYNNNNRTG	2 cut(s)	50, 710
MspI	CCGG	3 cut(s)	235, 242, 458
MspR9I	CCNGG	3 cut(s)	242, 243, 332
MvaI	CCWGG	1 cut(s)	332
MvnI	CGCG	1 cut(s)	771
MwoI	GCNNNNNNNGC	1 cut(s)	264
NciI	CCSGG	2 cut(s)	242, 243
NcoI	CCATGG	1 cut(s)	51
NdeII	GATC	1 cut(s)	508
NlaIII	CATG	5 cut(s)	22, 45, 55, 103, 678
NlaIV	GGNNCC	3 cut(s)	150, 239, 795
NmeAIII	GCCGAG	1 cut(s)	521
NmuCI	GTSAC	1 cut(s)	460
NspI	RCATGY	1 cut(s)	678
NspV	TTCGAA	1 cut(s)	441
PauI	GCGCGC	1 cut(s)	769
PfeI	GAWTC	2 cut(s)	397, 594
PinAI	ACCGGT	1 cut(s)	234
PkrI	GCNGC	3 cut(s)	10, 269, 637
Ppu21I	YACGTR	3 cut(s)	181, 250, 305
Psp124BI	GAGCTC	1 cut(s)	662
Psp6I	CCWGG	1 cut(s)	330
PspGI	CCWGG	1 cut(s)	330
PspN4I	GGNNCC	3 cut(s)	150, 239, 795
PspPI	GGNCC	1 cut(s)	148
PstNI	CAGNNNCTG	1 cut(s)	216
PteI	GCGCGC	1 cut(s)	769
RsaI	GTAC	1 cut(s)	142
RsaNI	GTAC	1 cut(s)	141
RseI	CAYNNNNRTG	2 cut(s)	50, 710
SacI	GAGCTC	1 cut(s)	662
SaqAI	TTAA	4 cut(s)	471, 588, 765, 850
SatI	GCNGC	3 cut(s)	9, 268, 636
Sau3AI	GATC	1 cut(s)	508
Sau96I	GGNCC	1 cut(s)	148
ScrFI	CCNGG	3 cut(s)	242, 243, 332
SduI	GDGCHC	2 cut(s)	662, 704
SfaNI	GCATC	1 cut(s)	444
SfuI	TTCGAA	1 cut(s)	441
SinI	GGWCC	1 cut(s)	148
SmaI	CCCGGG	1 cut(s)	243
SmiMI	CAYNNNNRTG	2 cut(s)	50, 710
Sse9I	AATT	2 cut(s)	434, 570
SspI	AATATT	1 cut(s)	415
SspMI	CTAG	1 cut(s)	732
SstI	GAGCTC	1 cut(s)	662
StyD4I	CCNGG	3 cut(s)	240, 241, 330
StyI	CCWWGG	1 cut(s)	51
TaaI	ACNGT	4 cut(s)	323, 476, 789, 801
TaiI	ACGT	3 cut(s)	183, 252, 307
TaqI	TCGA	4 cut(s)	400, 441, 750, 778
TaqII	GACCGA	1 cut(s)	136
TasI	AATT	2 cut(s)	434, 570
TfiI	GAWTC	2 cut(s)	397, 594
Tru1I	TTAA	4 cut(s)	471, 588, 765, 850
Tru9I	TTAA	4 cut(s)	471, 588, 765, 850
TscAI	CASTG	1 cut(s)	328
TseFI	GTSAC	1 cut(s)	460
TseI	GCWGC	3 cut(s)	8, 267, 635
Tsp45I	GTSAC	1 cut(s)	460
TspDTI	ATGAA	5 cut(s)	30, 35, 116, 366, 543
TspMI	CCCGGG	1 cut(s)	241
TspRI	CASTG	1 cut(s)	328
VpaK11BI	GGWCC	1 cut(s)	148
XceI	RCATGY	1 cut(s)	678
XmaI	CCCGGG	1 cut(s)	241
XmiI	GTMKAC	1 cut(s)	719
XspI	CTAG	1 cut(s)	732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.