Rh1CG359800

Protein kinase C conserved region 2 (CalB)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0009063
Physical Location & Seq
Reverse (-)
63306347 .. 63306541
195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG359800.1

Sequence Viewer

Length: 195 bp
ATGCCCTCATCATCTGGAGCACCACCTCCTGGTCGTGGAACTCGGGCCGGAGGACCTGCTTTTGCAATGGGAATGGGTGCTGGAGCTCTGGCAGCCGGTGCGGTGATCTTCGGTGATGACTTTATGTCAGGATTTGATGTTCCTTCAGGCTTACAAGATGCTAGTGTTACCATATCAGCTGATCCTCCTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2

Protein Analysis

64

Amino Acids

6.1

Weight (kDa)

4.05

Isoelectric Point (pI)

56.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 64
AccB7I CCANNNNNTGG 1 cut(s) 29
AciI CCGC 1 cut(s) 101
AclWI GGATC 1 cut(s) 176
AcuI CTGAAG 1 cut(s) 129
AfiI CCNNNNNNNGG 2 cut(s) 29, 35
AhdI GACNNNNNGTC 1 cut(s) 124
AjnI CCWGG 1 cut(s) 28
AloI GAACNNNNNNTCC 2 cut(s) 123, 155
AluBI AGCT 2 cut(s) 86, 179
AluI AGCT 2 cut(s) 86, 179
Alw21I GWGCWC 2 cut(s) 22, 88
AlwI GGATC 1 cut(s) 176
Ama87I CYCGRG 1 cut(s) 42
AoxI GGCC 1 cut(s) 45
ApeKI GCWGC 1 cut(s) 92
AspS9I GGNCC 2 cut(s) 45, 53
AsuHPI GGTGA 2 cut(s) 115, 125
AvaI CYCGRG 1 cut(s) 42
AvaII GGWCC 1 cut(s) 53
BanII GRGCYC 1 cut(s) 88
Bbv12I GWGCWC 2 cut(s) 22, 88
BbvI GCAGC 1 cut(s) 104
BciT130I CCWGG 1 cut(s) 30
BfaI CTAG 1 cut(s) 162
BfuAI ACCTGC 1 cut(s) 64
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
Bme1390I CCNGG 1 cut(s) 30
Bme18I GGWCC 1 cut(s) 53
BmeRI GACNNNNNGTC 1 cut(s) 124
BmeT110I CYCGRG 1 cut(s) 42
BmgT120I GGNCC 2 cut(s) 45, 53
BmrFI CCNGG 1 cut(s) 30
BmsI GCATC 1 cut(s) 148
BpmI CTGGAG 2 cut(s) 36, 102
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 35
Bse118I RCCGGY 1 cut(s) 95
Bse3DI GCAATG 1 cut(s) 72
BseBI CCWGG 1 cut(s) 30
BseLI CCNNNNNNNGG 2 cut(s) 29, 35
BseMI GCAATG 1 cut(s) 72
BseXI GCAGC 1 cut(s) 104
BshFI GGCC 1 cut(s) 47
BsiHKAI GWGCWC 2 cut(s) 22, 88
BsiHKCI CYCGRG 1 cut(s) 42
BsiSI CCGG 2 cut(s) 48, 96
BslI CCNNNNNNNGG 2 cut(s) 29, 35
BsnI GGCC 1 cut(s) 47
BsoBI CYCGRG 1 cut(s) 42
Bsp1286I GDGCHC 2 cut(s) 22, 88
Bsp143I GATC 2 cut(s) 105, 181
BspACI CCGC 1 cut(s) 101
BspANI GGCC 1 cut(s) 47
BspMI ACCTGC 1 cut(s) 64
BspPI GGATC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 72
BsrFI RCCGGY 1 cut(s) 95
BssAI RCCGGY 1 cut(s) 95
BssMI GATC 2 cut(s) 105, 181
Bst2UI CCWGG 1 cut(s) 30
BstAPI GCANNNNNTGC 1 cut(s) 98
BstKTI GATC 2 cut(s) 108, 184
BstMBI GATC 2 cut(s) 105, 181
BstMWI GCNNNNNNNGC 2 cut(s) 92, 98
BstNI CCWGG 1 cut(s) 30
BstSCI CCNGG 1 cut(s) 28
BstV1I GCAGC 1 cut(s) 104
BsuRI GGCC 1 cut(s) 47
BveI ACCTGC 1 cut(s) 64
Cfr10I RCCGGY 1 cut(s) 95
Cfr13I GGNCC 2 cut(s) 45, 53
CviJI RGCY 5 cut(s) 47, 86, 95, 150, 179
CviKI_1 RGCY 5 cut(s) 47, 86, 95, 150, 179
DpnI GATC 2 cut(s) 107, 183
DpnII GATC 2 cut(s) 105, 181
DriI GACNNNNNGTC 1 cut(s) 124
Eam1105I GACNNNNNGTC 1 cut(s) 124
Ecl136II GAGCTC 1 cut(s) 86
Eco24I GRGCYC 1 cut(s) 88
Eco47I GGWCC 1 cut(s) 53
Eco53kI GAGCTC 1 cut(s) 86
Eco57I CTGAAG 1 cut(s) 129
Eco88I CYCGRG 1 cut(s) 42
EcoICRI GAGCTC 1 cut(s) 86
EcoO109I RGGNCCY 1 cut(s) 53
EcoRII CCWGG 1 cut(s) 28
EcoT38I GRGCYC 1 cut(s) 88
FaiI YATR 2 cut(s) 125, 173
Fnu4HI GCNGC 1 cut(s) 93
FriOI GRGCYC 1 cut(s) 88
Fsp4HI GCNGC 1 cut(s) 93
FspBI CTAG 1 cut(s) 162
GluI GCNGC 1 cut(s) 93
GsuI CTGGAG 2 cut(s) 36, 102
HaeIII GGCC 1 cut(s) 47
HapII CCGG 2 cut(s) 48, 96
HpaII CCGG 2 cut(s) 48, 96
HphI GGTGA 2 cut(s) 115, 125
Hpy188III TCNNGA 2 cut(s) 15, 129
HpyAV CCTTC 1 cut(s) 153
HpyCH4V TGCA 1 cut(s) 65
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 98
Kzo9I GATC 2 cut(s) 105, 181
LmnI GCTCC 2 cut(s) 17, 83
LpnPI CCDG 9 cut(s) 15, 42, 61, 66, 69, 74, 109, 114, 132
Lsp1109I GCAGC 1 cut(s) 104
LweI GCATC 1 cut(s) 148
MaeI CTAG 1 cut(s) 162
MaeIII GTNAC 1 cut(s) 166
MalI GATC 2 cut(s) 107, 183
MboI GATC 2 cut(s) 105, 181
MboII GAAGA 1 cut(s) 100
MhlI GDGCHC 2 cut(s) 22, 88
MnlI CCTC 4 cut(s) 16, 36, 44, 195
MspA1I CMGCKG 1 cut(s) 179
MspI CCGG 2 cut(s) 48, 96
MspR9I CCNGG 1 cut(s) 30
MvaI CCWGG 1 cut(s) 30
MwoI GCNNNNNNNGC 2 cut(s) 92, 98
NdeII GATC 2 cut(s) 105, 181
PflMI CCANNNNNTGG 1 cut(s) 29
PkrI GCNGC 1 cut(s) 94
PpuMI RGGWCCY 1 cut(s) 53
Psp124BI GAGCTC 1 cut(s) 88
Psp5II RGGWCCY 1 cut(s) 53
Psp6I CCWGG 1 cut(s) 28
PspGI CCWGG 1 cut(s) 28
PspPI GGNCC 2 cut(s) 45, 53
PspPPI RGGWCCY 1 cut(s) 53
PvuII CAGCTG 1 cut(s) 179
SacI GAGCTC 1 cut(s) 88
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 2 cut(s) 105, 181
Sau96I GGNCC 2 cut(s) 45, 53
ScrFI CCNGG 1 cut(s) 30
SduI GDGCHC 2 cut(s) 22, 88
SetI ASST 4 cut(s) 28, 58, 88, 181
SfaNI GCATC 1 cut(s) 148
SinI GGWCC 1 cut(s) 53
SsiI CCGC 1 cut(s) 101
SspMI CTAG 1 cut(s) 162
SstI GAGCTC 1 cut(s) 88
StyD4I CCNGG 1 cut(s) 28
TseI GCWGC 1 cut(s) 92
Van91I CCANNNNNTGG 1 cut(s) 29
VpaK11BI GGWCC 1 cut(s) 53
XspI CTAG 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.