Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012065

Physical Location & Seq

Genomic Coordinates Forward (+)

11274296 .. 11276299

Gene Structure 2004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G21130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGAAACTCGAGAAGAAGAAAGGTATTGGGGCGAAGAGAAGAGGGAAAAAGAGTTCCATCGATCATGATCCTTTCTTAGAGGAAGAGACAGAGAAGCGGAGAAAATTCAATTACGATGATGATGATGATATCGAATCTGTAGAATCTGAAGAGGAAGGGAAGGTTGGTGAGGAGGTGGAGGATGAGTTTGCTCATGAGACGGTAGGCGAGAAACGAAAGAGACTGGCGGAGGATACTTTGAATAGAATCGAAGAGGCGAAACAGAGAGAGCATGAAGAAGATAACGAGGAAGATGATGATTTTAGAGATTCGCTTGTGGCAAAGACTCTAATGCAGGAACAGCTCGAGAAGAGTGGTCGTGTTCGGAGAGCCAATGCATTGAGGGTTCAAGATCTACAGAGTAGCGATAAGTTTCGTGTTATAGTCAAACACCAACATTCTGTTACAGGAGTAGCTCTATCAGATGATGATTCAAGAGGGTTCTCAGTTTCGAAAGACGGTACTATTCTGCATTGGGATGTATCTTCTGGTAAAAGTGATGAGTACAAATGGCCAAGCGATGAAGTTTTGAAGTCTCACGGGTTAAAGTTCCAGGAATCTTGGTATACAAGACATAACAAACAATCTCTAGCATTAGCTGTTAGCTCTGATGGCCGGTATTTAGCGACTGGAGGAGTTGATTGCCATGTTCATTTGTGGGATATCCGAACACGAGAGCATGTCCAGGCTTTTACAGGTCACTGTGGCATTGTTTCTAGTCTATGCTTTAGAGAAGGAACTGCAGAACTCTTTTCTGGTTCATATGATGGAACATTAAGTATATGGAATGCAGAACATAGAACATATATAGAATCATGTTTTGGACACCAGTCTGAACTTCTATCCATTGATGCTCTAGGGAGGGAGCGTGTTCTCAGTGTTGGACGCGATAGAACAATGCAGTTATATAAGGTTCCCGAGTCTACTCGGTTGATCTATCGAGCTTCCGAATCAAATTTTGAGTGCTGCTGTTTTGTTAATAGTGATGAGTTTTTGTCCGGATCAGATAATGGAAGTATTGCACTTTGGTCCATTTTGAAAAAGAAACCAGTGTTTATCGTTAACAATGCTCACCACGTGATAGCTGATCATGATTCTGTTAACCATAACTGTACACCAGCATGTTCTTGGGTCAGTTCAGTTGCTGTCTGTAGAGGTAGCGAGCTTGCTGCATCGGGAGCTGGTAATGGTTGTGTGCGTTTATGGGGTGTTGAAAGTGGATCTAGTGCTATACAACCTTTATACGAGCTTCCACTTCCTGGGTTTGTGAACTCTTTAGCTTTTGCAAAATCTGGTCGGTTTCTGATCGCTGGTGTTGGACAGGAACCGCGGCTCGGAAGATGGGGTTGCTTAAAATCTGCGCAGAACGGTGTTGCAATACATCCCTTAAGGCTTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005732 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0007154 GO:0007275 GO:0008037 GO:0008150 GO:0008152 GO:0009553 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009875 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016072 GO:0022414 GO:0022613 GO:0030515 GO:0030684 GO:0031428 GO:0031461 GO:0031974 GO:0031981 GO:0032040 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044706 GO:0046483 GO:0048229 GO:0048316 GO:0048544 GO:0048608 GO:0048731 GO:0048856 GO:0051704 GO:0060321 GO:0061458 GO:0070013 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

479

Amino Acids

53.58

Weight (kDa)

5.73

Isoelectric Point (pI)

45.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	126 - 285	5.4e-14	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	127 - 318	4.6e-22	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	127 - 276	1.4e-13	Prp19 WD40 domain
WDR55	PF24796	138 - 316	6.7e-14	WDR55
Beta-prop_WDR36-Utp21_2nd	PF25168	144 - 296	4.1e-08	WDR36/Utp21 second beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	184 - 317	1.3e-14	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	194 - 317	1.8e-11	WDR3 second beta-propeller domain
WD40_Gbeta	PF25391	198 - 271	2.4e-07	G protein beta WD-40 repeat protein
Beta-prop_EML	PF23409	201 - 372	1.1e-11	Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st	PF24817	201 - 371	7.2e-15	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	202 - 295	8.3e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_THOC3	PF25174	202 - 256	1.8e-08	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	203 - 358	9.1e-20	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	204 - 363	2.8e-18	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	205 - 451	5.3e-20	THOC3 beta-propeller domain
WD40_Prp19	PF24814	210 - 454	1.6e-17	Prp19 WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	211 - 276	4.9e-06	MABP1/WDR62 second WD40 domain
WD40	PF00400	240 - 276	8.3e-06	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	304 - 450	6.3e-06	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05410 AT4G21130
fragaria_vesca	FvH4_3g09990
malus_domestica	MD05G1274300.v1.1 MD10G1254000.v1.1
prunus_persica	Prupe.4G089600_v2.0.a1
pyrus_communis	pycom05g25570 pycom05g25580 pycom10g20960 pycom10g20970
rosa_chinensis	RchiOBHm_Chr5g0015871
rosa_laevigata	RLG00000032227
rosa_roxburghii	Rroxscaffold_1G00060730
rosa_rugosa	Rorug05G0029700
rosa_samantha	Rh5AG123300 Rh5BG122200 Rh5CG133400 Rh5DG121600
rosa_wichuraiana	Rw5G010640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1401
AccB7I	CCANNNNNTGG	1 cut(s)	1298
AccI	GTMKAC	2 cut(s)	605, 962
AccII	CGCG	2 cut(s)	927, 1369
AccIII	TCCGGA	1 cut(s)	1037
AciI	CCGC	4 cut(s)	97, 227, 1367, 1369
AclWI	GGATC	3 cut(s)	62, 1048, 1267
AcoI	YGGCCR	2 cut(s)	551, 652
AcsI	RAATTY	2 cut(s)	104, 994
AcuI	CTGAAG	1 cut(s)	168
AcvI	CACGTG	1 cut(s)	1117
AdeI	CACNNNGTG	1 cut(s)	1117
AfaI	GTAC	3 cut(s)	502, 545, 1153
AfiI	CCNNNNNNNGG	2 cut(s)	1298, 1373
AflII	CTTAAG	1 cut(s)	1426
AgsI	TTSAA	7 cut(s)	109, 241, 389, 474, 571, 1078, 1253
AjnI	CCWGG	3 cut(s)	591, 723, 1297
AjuI	GAANNNNNNNTTGG	4 cut(s)	147, 179, 843, 875
AloI	GAACNNNNNNTCC	2 cut(s)	37, 69
Alw26I	GTCTC	4 cut(s)	80, 191, 214, 579
AlwI	GGATC	3 cut(s)	62, 1048, 1267
AlwNI	CAGNNNCTG	1 cut(s)	1184
Ama87I	CYCGRG	3 cut(s)	8, 344, 956
Aor13HI	TCCGGA	1 cut(s)	1037
AoxI	GGCC	2 cut(s)	551, 652
ApeKI	GCWGC	2 cut(s)	1005, 1208
ApoI	RAATTY	2 cut(s)	104, 994
AspLEI	GCGC	1 cut(s)	1402
AspS9I	GGNCC	1 cut(s)	1068
AsuHPI	GGTGA	2 cut(s)	179, 1103
AsuII	TTCGAA	1 cut(s)	491
AvaI	CYCGRG	3 cut(s)	8, 344, 956
AvaII	GGWCC	1 cut(s)	1068
BalI	TGGCCA	1 cut(s)	553
BauI	CACGAG	1 cut(s)	711
BbrPI	CACGTG	1 cut(s)	1117
BbvI	GCAGC	2 cut(s)	992, 1195
BccI	CCATC	4 cut(s)	65, 644, 800, 1374
BcgI	CGANNNNNNTGC	2 cut(s)	1190, 1224
BciT130I	CCWGG	3 cut(s)	593, 725, 1299
BciVI	GTATCC	1 cut(s)	226
BclI	TGATCA	1 cut(s)	1126
BcoDI	GTCTC	4 cut(s)	80, 191, 214, 579
BfaI	CTAG	4 cut(s)	629, 756, 896, 1263
BfmI	CTRYAG	4 cut(s)	138, 395, 780, 1189
BfrI	CTTAAG	1 cut(s)	1426
BfuI	GTATCC	1 cut(s)	226
BglII	AGATCT	1 cut(s)	391
BisI	GCNGC	3 cut(s)	1006, 1209, 1370
BlsI	GCNGC	3 cut(s)	1007, 1210, 1371
Bme1390I	CCNGG	3 cut(s)	593, 725, 1299
Bme18I	GGWCC	1 cut(s)	1068
BmeT110I	CYCGRG	3 cut(s)	8, 344, 956
BmgT120I	GGNCC	1 cut(s)	1068
BmiI	GGNNCC	2 cut(s)	954, 1365
BmrFI	CCNGG	3 cut(s)	593, 725, 1299
BmsI	GCATC	2 cut(s)	880, 1220
BoxI	GACNNNNGTC	1 cut(s)	868
BpmI	CTGGAG	1 cut(s)	690
Bpu14I	TTCGAA	1 cut(s)	491
Bsa29I	ATCGAT	1 cut(s)	60
BsaAI	YACGTR	1 cut(s)	1117
BsaBI	GATNNNNATC	1 cut(s)	66
BsaJI	CCNNGG	2 cut(s)	1298, 1367
BsaWI	WCCGGW	1 cut(s)	1037
BsaXI	ACNNNNNCTCC	4 cut(s)	170, 200, 892, 922
Bsc4I	CCNNNNNNNGG	2 cut(s)	1298, 1373
Bse118I	RCCGGY	1 cut(s)	654
Bse1I	ACTGG	4 cut(s)	228, 673, 868, 1088
Bse8I	GATNNNNATC	1 cut(s)	66
BseAI	TCCGGA	1 cut(s)	1037
BseBI	CCWGG	3 cut(s)	593, 725, 1299
BseCI	ATCGAT	1 cut(s)	60
BseDI	CCNNGG	2 cut(s)	1298, 1367
BseGI	GGATG	3 cut(s)	187, 523, 1420
BseJI	GATNNNNATC	1 cut(s)	66
BseLI	CCNNNNNNNGG	2 cut(s)	1298, 1373
BseMII	CTCAG	2 cut(s)	498, 928
BseNI	ACTGG	4 cut(s)	228, 673, 868, 1088
BseRI	GAGGAG	2 cut(s)	185, 687
BseXI	GCAGC	2 cut(s)	992, 1195
Bsh1236I	CGCG	2 cut(s)	927, 1369
BshFI	GGCC	2 cut(s)	553, 654
BshVI	ATCGAT	1 cut(s)	60
BsiHKCI	CYCGRG	3 cut(s)	8, 344, 956
BsiSI	CCGG	2 cut(s)	655, 1038
BslI	CCNNNNNNNGG	2 cut(s)	1298, 1373
BsmAI	GTCTC	4 cut(s)	80, 191, 214, 579
BsmBI	CGTCTC	1 cut(s)	191
BsmI	GAATGC	1 cut(s)	832
BsnI	GGCC	2 cut(s)	553, 654
BsoBI	CYCGRG	3 cut(s)	8, 344, 956
Bsp119I	TTCGAA	1 cut(s)	491
Bsp13I	TCCGGA	1 cut(s)	1037
Bsp1407I	TGTACA	1 cut(s)	1151
Bsp143I	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
BspACI	CCGC	4 cut(s)	97, 227, 1367, 1369
BspANI	GGCC	2 cut(s)	553, 654
BspCNI	CTCAG	2 cut(s)	497, 927
BspDI	ATCGAT	1 cut(s)	60
BspEI	TCCGGA	1 cut(s)	1037
BspFNI	CGCG	2 cut(s)	927, 1369
BspHI	TCATGA	4 cut(s)	64, 193, 1129, 1436
BspLI	GGNNCC	2 cut(s)	954, 1365
BspMAI	CTGCAG	1 cut(s)	784
BspPI	GGATC	3 cut(s)	62, 1048, 1267
BspT104I	TTCGAA	1 cut(s)	491
BspTI	CTTAAG	1 cut(s)	1426
BsrFI	RCCGGY	1 cut(s)	654
BsrGI	TGTACA	1 cut(s)	1151
BsrI	ACTGG	4 cut(s)	228, 673, 868, 1088
BssAI	RCCGGY	1 cut(s)	654
BssECI	CCNNGG	2 cut(s)	1298, 1367
BssMI	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
BssNAI	GTATAC	1 cut(s)	606
BssSI	CACGAG	1 cut(s)	711
Bst1107I	GTATAC	1 cut(s)	606
Bst2BI	CACGAG	1 cut(s)	711
Bst2UI	CCWGG	3 cut(s)	593, 725, 1299
Bst4CI	ACNGT	5 cut(s)	202, 500, 743, 1151, 1409
Bst6I	CTCTTC	6 cut(s)	29, 34, 78, 144, 246, 344
BstAFI	CTTAAG	1 cut(s)	1426
BstAUI	TGTACA	1 cut(s)	1151
BstBAI	YACGTR	1 cut(s)	1117
BstBI	TTCGAA	1 cut(s)	491
BstC8I	GCNNGC	2 cut(s)	1202, 1206
BstDEI	CTNAG	3 cut(s)	76, 484, 914
BstDSI	CCRYGG	1 cut(s)	1367
BstF5I	GGATG	3 cut(s)	187, 523, 1420
BstFNI	CGCG	2 cut(s)	927, 1369
BstHHI	GCGC	1 cut(s)	1402
BstKTI	GATC	8 cut(s)	64, 70, 394, 975, 1043, 1129, 1262, 1347
BstMAI	GTCTC	4 cut(s)	80, 191, 214, 579
BstMBI	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
BstMWI	GCNNNNNNNGC	3 cut(s)	340, 651, 1217
BstNI	CCWGG	3 cut(s)	593, 725, 1299
BstNSI	RCATGY	2 cut(s)	722, 1164
BstPAI	GACNNNNGTC	1 cut(s)	868
BstSCI	CCNGG	3 cut(s)	591, 723, 1297
BstSFI	CTRYAG	4 cut(s)	138, 395, 780, 1189
BstUI	CGCG	2 cut(s)	927, 1369
BstV1I	GCAGC	2 cut(s)	992, 1195
BstX2I	RGATCY	2 cut(s)	391, 1259
BstYI	RGATCY	2 cut(s)	391, 1259
BstZ17I	GTATAC	1 cut(s)	606
Bsu15I	ATCGAT	1 cut(s)	60
BsuI	GTATCC	1 cut(s)	226
BsuRI	GGCC	2 cut(s)	553, 654
BsuTUI	ATCGAT	1 cut(s)	60
BtgI	CCRYGG	1 cut(s)	1367
BtgZI	GCGATG	1 cut(s)	573
BtsCI	GGATG	3 cut(s)	187, 523, 1420
BtsIMutI	CAGTG	3 cut(s)	739, 922, 1095
Cac8I	GCNNGC	2 cut(s)	1202, 1206
CaiI	CAGNNNCTG	1 cut(s)	1184
CciI	TCATGA	4 cut(s)	64, 193, 1129, 1436
CfoI	GCGC	1 cut(s)	1402
Cfr10I	RCCGGY	1 cut(s)	654
Cfr13I	GGNCC	1 cut(s)	1068
Cfr42I	CCGCGG	1 cut(s)	1370
ClaI	ATCGAT	1 cut(s)	60
CseI	GACGC	1 cut(s)	933
Csp6I	GTAC	3 cut(s)	501, 544, 1152
CviAII	CATG	9 cut(s)	65, 194, 272, 686, 719, 855, 1130, 1161, 1437
CviQI	GTAC	3 cut(s)	501, 544, 1152
DdeI	CTNAG	3 cut(s)	76, 484, 914
DpnI	GATC	8 cut(s)	63, 69, 393, 974, 1042, 1128, 1261, 1346
DpnII	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
DraIII	CACNNNGTG	1 cut(s)	1117
EaeI	YGGCCR	2 cut(s)	551, 652
Eam1104I	CTCTTC	6 cut(s)	29, 34, 78, 144, 246, 344
EarI	CTCTTC	6 cut(s)	29, 34, 78, 144, 246, 344
EciI	GGCGGA	1 cut(s)	242
Eco32I	GATATC	2 cut(s)	130, 703
Eco47I	GGWCC	1 cut(s)	1068
Eco57I	CTGAAG	1 cut(s)	168
Eco72I	CACGTG	1 cut(s)	1117
Eco88I	CYCGRG	3 cut(s)	8, 344, 956
EcoRII	CCWGG	3 cut(s)	591, 723, 1297
EcoRV	GATATC	2 cut(s)	130, 703
EcoT22I	ATGCAT	1 cut(s)	379
Esp3I	CGTCTC	1 cut(s)	191
FaeI	CATG	9 cut(s)	68, 197, 275, 689, 722, 858, 1133, 1164, 1440
FatI	CATG	9 cut(s)	64, 193, 271, 685, 718, 854, 1129, 1160, 1436
FauNDI	CATATG	1 cut(s)	802
FbaI	TGATCA	1 cut(s)	1126
FblI	GTMKAC	2 cut(s)	605, 962
Fnu4HI	GCNGC	3 cut(s)	1006, 1209, 1370
FokI	GGATG	3 cut(s)	194, 530, 1407
Fsp4HI	GCNGC	3 cut(s)	1006, 1209, 1370
FspBI	CTAG	4 cut(s)	629, 756, 896, 1263
FspI	TGCGCA	1 cut(s)	1401
GlaI	GCGC	1 cut(s)	1401
GluI	GCNGC	3 cut(s)	1006, 1209, 1370
GsuI	CTGGAG	1 cut(s)	690
HaeIII	GGCC	2 cut(s)	553, 654
HapII	CCGG	2 cut(s)	655, 1038
HgaI	GACGC	1 cut(s)	933
HhaI	GCGC	1 cut(s)	1402
Hin1II	CATG	9 cut(s)	68, 197, 275, 689, 722, 858, 1133, 1164, 1440
Hin6I	GCGC	1 cut(s)	1400
HinP1I	GCGC	1 cut(s)	1400
HincII	GTYRAC	2 cut(s)	1102, 1141
HindII	GTYRAC	2 cut(s)	1102, 1141
HpaI	GTTAAC	2 cut(s)	1102, 1141
HpaII	CCGG	2 cut(s)	655, 1038
HphI	GGTGA	2 cut(s)	179, 1103
Hpy166II	GTNNAC	6 cut(s)	606, 963, 1102, 1141, 1154, 1309
Hpy8I	GTNNAC	6 cut(s)	606, 963, 1102, 1141, 1154, 1309
HpyAV	CCTTC	3 cut(s)	149, 154, 767
HpyCH4III	ACNGT	5 cut(s)	202, 500, 743, 1151, 1409
HpyCH4IV	ACGT	1 cut(s)	1116
HpyF10VI	GCNNNNNNNGC	3 cut(s)	340, 651, 1217
HpyF3I	CTNAG	3 cut(s)	76, 484, 914
HpySE526I	ACGT	1 cut(s)	1116
Hsp92II	CATG	9 cut(s)	68, 197, 275, 689, 722, 858, 1133, 1164, 1440
HspAI	GCGC	1 cut(s)	1400
Kpn2I	TCCGGA	1 cut(s)	1037
Ksp22I	TGATCA	1 cut(s)	1126
KspAI	GTTAAC	2 cut(s)	1102, 1141
KspI	CCGCGG	1 cut(s)	1370
Kzo9I	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
LmnI	GCTCC	2 cut(s)	904, 1217
Lsp1109I	GCAGC	2 cut(s)	992, 1195
LweI	GCATC	2 cut(s)	880, 1220
MaeI	CTAG	4 cut(s)	629, 756, 896, 1263
MaeII	ACGT	1 cut(s)	1116
MaeIII	GTNAC	2 cut(s)	442, 737
MalI	GATC	8 cut(s)	63, 69, 393, 974, 1042, 1128, 1261, 1346
MboI	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
MflI	RGATCY	2 cut(s)	391, 1259
MlsI	TGGCCA	1 cut(s)	553
MluCI	AATT	3 cut(s)	104, 109, 994
MluNI	TGGCCA	1 cut(s)	553
MlyI	GAGTC	2 cut(s)	319, 968
MmeI	TCCRAC	2 cut(s)	901, 1336
Mox20I	TGGCCA	1 cut(s)	553
Mph1103I	ATGCAT	1 cut(s)	379
MroI	TCCGGA	1 cut(s)	1037
MscI	TGGCCA	1 cut(s)	553
MseI	TTAA	7 cut(s)	584, 815, 1017, 1101, 1140, 1391, 1427
MslI	CAYNNNNRTG	2 cut(s)	516, 1159
Msp20I	TGGCCA	1 cut(s)	553
MspA1I	CMGCKG	1 cut(s)	1369
MspCI	CTTAAG	1 cut(s)	1426
MspI	CCGG	2 cut(s)	655, 1038
MspR9I	CCNGG	3 cut(s)	593, 725, 1299
Mva1269I	GAATGC	1 cut(s)	832
MvaI	CCWGG	3 cut(s)	593, 725, 1299
MvnI	CGCG	2 cut(s)	927, 1369
MwoI	GCNNNNNNNGC	3 cut(s)	340, 651, 1217
NdeI	CATATG	1 cut(s)	802
NdeII	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
NlaIII	CATG	9 cut(s)	68, 197, 275, 689, 722, 858, 1133, 1164, 1440
NlaIV	GGNNCC	2 cut(s)	954, 1365
NmuCI	GTSAC	1 cut(s)	737
NsbI	TGCGCA	1 cut(s)	1401
NsiI	ATGCAT	1 cut(s)	379
NspI	RCATGY	2 cut(s)	722, 1164
NspV	TTCGAA	1 cut(s)	491
PaeR7I	CTCGAG	2 cut(s)	8, 344
PagI	TCATGA	4 cut(s)	64, 193, 1129, 1436
PctI	GAATGC	1 cut(s)	832
PfeI	GAWTC	9 cut(s)	134, 143, 246, 308, 470, 596, 851, 989, 1133
PflMI	CCANNNNNTGG	1 cut(s)	1298
PfoI	TCCNGGA	1 cut(s)	591
PkrI	GCNGC	3 cut(s)	1007, 1210, 1371
PleI	GAGTC	2 cut(s)	319, 967
PmaCI	CACGTG	1 cut(s)	1117
PmlI	CACGTG	1 cut(s)	1117
PpsI	GAGTC	2 cut(s)	319, 967
Ppu21I	YACGTR	1 cut(s)	1117
PshAI	GACNNNNGTC	1 cut(s)	868
Psp6I	CCWGG	3 cut(s)	591, 723, 1297
PspCI	CACGTG	1 cut(s)	1117
PspGI	CCWGG	3 cut(s)	591, 723, 1297
PspN4I	GGNNCC	2 cut(s)	954, 1365
PspPI	GGNCC	1 cut(s)	1068
PstI	CTGCAG	1 cut(s)	784
PstNI	CAGNNNCTG	1 cut(s)	1184
PsuI	RGATCY	2 cut(s)	391, 1259
RsaI	GTAC	3 cut(s)	502, 545, 1153
RsaNI	GTAC	3 cut(s)	501, 544, 1152
RseI	CAYNNNNRTG	2 cut(s)	516, 1159
SacII	CCGCGG	1 cut(s)	1370
SaqAI	TTAA	7 cut(s)	584, 815, 1017, 1101, 1140, 1391, 1427
SatI	GCNGC	3 cut(s)	1006, 1209, 1370
Sau3AI	GATC	8 cut(s)	61, 67, 391, 972, 1040, 1126, 1259, 1344
Sau96I	GGNCC	1 cut(s)	1068
SchI	GAGTC	2 cut(s)	319, 968
ScrFI	CCNGG	3 cut(s)	593, 725, 1299
SfaNI	GCATC	2 cut(s)	880, 1220
SfcI	CTRYAG	4 cut(s)	138, 395, 780, 1189
Sfr274I	CTCGAG	2 cut(s)	8, 344
Sfr303I	CCGCGG	1 cut(s)	1370
SfuI	TTCGAA	1 cut(s)	491
SgrBI	CCGCGG	1 cut(s)	1370
SinI	GGWCC	1 cut(s)	1068
SlaI	CTCGAG	2 cut(s)	8, 344
SmiMI	CAYNNNNRTG	2 cut(s)	516, 1159
SmlI	CTYRAG	3 cut(s)	8, 344, 1426
SmoI	CTYRAG	3 cut(s)	8, 344, 1426
Sse9I	AATT	3 cut(s)	104, 109, 994
SsiI	CCGC	4 cut(s)	97, 227, 1367, 1369
SspMI	CTAG	4 cut(s)	629, 756, 896, 1263
StyD4I	CCNGG	3 cut(s)	591, 723, 1297
TaaI	ACNGT	5 cut(s)	202, 500, 743, 1151, 1409
TaiI	ACGT	1 cut(s)	1119
TaqI	TCGA	7 cut(s)	9, 60, 132, 249, 345, 491, 979
TasI	AATT	3 cut(s)	104, 109, 994
TatI	WGTACW	2 cut(s)	543, 1151
TauI	GCSGC	1 cut(s)	1372
TfiI	GAWTC	9 cut(s)	134, 143, 246, 308, 470, 596, 851, 989, 1133
Tru1I	TTAA	7 cut(s)	584, 815, 1017, 1101, 1140, 1391, 1427
Tru9I	TTAA	7 cut(s)	584, 815, 1017, 1101, 1140, 1391, 1427
TscAI	CASTG	3 cut(s)	746, 922, 1095
TseFI	GTSAC	1 cut(s)	737
TseI	GCWGC	2 cut(s)	1005, 1208
Tsp45I	GTSAC	1 cut(s)	737
TspDTI	ATGAA	6 cut(s)	17, 288, 576, 680, 789, 1425
TspRI	CASTG	3 cut(s)	746, 922, 1095
Van91I	CCANNNNNTGG	1 cut(s)	1298
Vha464I	CTTAAG	1 cut(s)	1426
VpaK11BI	GGWCC	1 cut(s)	1068
XapI	RAATTY	2 cut(s)	104, 994
XceI	RCATGY	2 cut(s)	722, 1164
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1164
XhoI	CTCGAG	2 cut(s)	8, 344
XmiI	GTMKAC	2 cut(s)	605, 962
XspI	CTAG	4 cut(s)	629, 756, 896, 1263
Zsp2I	ATGCAT	1 cut(s)	379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.