ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G22285 AT4G22285 AT4G22350 AT4G22350 AT4G22350 AT4G22350 AT4G22410 AT4G22410 |
| fragaria_vesca | FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_6g03150 |
| malus_domestica | MD05G1357700.v1.1 MD10G1331700.v1.1 |
| prunus_persica | Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 |
| pyrus_communis | pycom05g32360 pycom10g28130 |
| rosa_chinensis | RchiOBHm_Chr4g0397451 RchiOBHm_Chr5g0001501 RchiOBHm_Chr5g0001511 |
| rosa_laevigata | RLG00000030934 |
| rosa_multiflora | Rmu_sc0003749.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00074880 |
| rosa_rugosa | Rorug04G0390700 |
| rosa_samantha | Rh5AG011700 Rh5BG014200 Rh5CG012700 Rh5DG012000 |
| rosa_wichuraiana | Rw5G001110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 879 |
| Acc36I | ACCTGC | 1 cut(s) | 1171 |
| AciI | CCGC | 2 cut(s) | 1136, 1178 |
| AclWI | GGATC | 3 cut(s) | 944, 1002, 1551 |
| AcoI | YGGCCR | 2 cut(s) | 937, 1251 |
| AcsI | RAATTY | 2 cut(s) | 769, 890 |
| AcuI | CTGAAG | 1 cut(s) | 1477 |
| AcyI | GRCGYC | 1 cut(s) | 1014 |
| AfaI | GTAC | 3 cut(s) | 443, 1464, 1532 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 101, 574, 829, 1351, 1369, 1484 |
| AjnI | CCWGG | 3 cut(s) | 682, 1041, 1097 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1334, 1366 |
| AluBI | AGCT | 7 cut(s) | 188, 245, 486, 631, 902, 1249, 1381 |
| AluI | AGCT | 7 cut(s) | 188, 245, 486, 631, 902, 1249, 1381 |
| Alw21I | GWGCWC | 2 cut(s) | 619, 1414 |
| Alw26I | GTCTC | 4 cut(s) | 286, 471, 813, 1553 |
| AlwI | GGATC | 3 cut(s) | 944, 1002, 1551 |
| AoxI | GGCC | 3 cut(s) | 937, 1241, 1251 |
| ApeKI | GCWGC | 1 cut(s) | 1507 |
| ApoI | RAATTY | 2 cut(s) | 769, 890 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 301, 443, 773, 1325 |
| AspLEI | GCGC | 1 cut(s) | 1512 |
| AsuHPI | GGTGA | 4 cut(s) | 20, 78, 812, 1058 |
| AxyI | CCTNAGG | 1 cut(s) | 1479 |
| BalI | TGGCCA | 2 cut(s) | 939, 1253 |
| BanII | GRGCYC | 1 cut(s) | 661 |
| BauI | CACGAG | 1 cut(s) | 189 |
| BbsI | GAAGAC | 1 cut(s) | 533 |
| Bbv12I | GWGCWC | 2 cut(s) | 619, 1414 |
| BbvCI | CCTCAGC | 1 cut(s) | 1382 |
| BbvI | GCAGC | 1 cut(s) | 1519 |
| BccI | CCATC | 6 cut(s) | 64, 659, 1208, 1405, 1463, 1567 |
| BceAI | ACGGC | 2 cut(s) | 109, 309 |
| BciT130I | CCWGG | 3 cut(s) | 684, 1043, 1099 |
| BciVI | GTATCC | 1 cut(s) | 1481 |
| BcoDI | GTCTC | 4 cut(s) | 286, 471, 813, 1553 |
| BfaI | CTAG | 4 cut(s) | 101, 654, 1124, 1407 |
| BfuAI | ACCTGC | 1 cut(s) | 1171 |
| BfuI | GTATCC | 1 cut(s) | 1481 |
| BisI | GCNGC | 1 cut(s) | 1508 |
| BlsI | GCNGC | 1 cut(s) | 1509 |
| BmcAI | AGTACT | 1 cut(s) | 443 |
| Bme1390I | CCNGG | 3 cut(s) | 684, 1043, 1099 |
| BmiI | GGNNCC | 2 cut(s) | 670, 974 |
| BmrFI | CCNGG | 3 cut(s) | 684, 1043, 1099 |
| BmrI | ACTGGG | 1 cut(s) | 1358 |
| BmsI | GCATC | 2 cut(s) | 1104, 1527 |
| BmuI | ACTGGG | 1 cut(s) | 1358 |
| BpiI | GAAGAC | 1 cut(s) | 533 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 742, 774 |
| BpmI | CTGGAG | 1 cut(s) | 1081 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1245, 1382 |
| BpuEI | CTTGAG | 1 cut(s) | 231 |
| BsaHI | GRCGYC | 1 cut(s) | 1014 |
| BsaJI | CCNNGG | 4 cut(s) | 448, 602, 1042, 1350 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1209, 1239 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 101, 574, 829, 1351, 1369, 1484 |
| Bse1I | ACTGG | 3 cut(s) | 739, 953, 1364 |
| Bse21I | CCTNAGG | 1 cut(s) | 1479 |
| Bse3DI | GCAATG | 2 cut(s) | 1084, 1400 |
| BseBI | CCWGG | 3 cut(s) | 684, 1043, 1099 |
| BseDI | CCNNGG | 4 cut(s) | 448, 602, 1042, 1350 |
| BseGI | GGATG | 3 cut(s) | 583, 1026, 1107 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 101, 574, 829, 1351, 1369, 1484 |
| BseMI | GCAATG | 2 cut(s) | 1084, 1400 |
| BseMII | CTCAG | 3 cut(s) | 27, 1373, 1470 |
| BseNI | ACTGG | 3 cut(s) | 739, 953, 1364 |
| BseRI | GAGGAG | 6 cut(s) | 176, 750, 801, 965, 1131, 1272 |
| BseXI | GCAGC | 1 cut(s) | 1519 |
| BsgI | GTGCAG | 1 cut(s) | 1526 |
| BshFI | GGCC | 3 cut(s) | 939, 1243, 1253 |
| BsiHKAI | GWGCWC | 2 cut(s) | 619, 1414 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 101, 574, 829, 1351, 1369, 1484 |
| BsmAI | GTCTC | 4 cut(s) | 286, 471, 813, 1553 |
| BsmI | GAATGC | 1 cut(s) | 301 |
| BsnI | GGCC | 3 cut(s) | 939, 1243, 1253 |
| Bsp1286I | GDGCHC | 3 cut(s) | 619, 661, 1414 |
| Bsp1407I | TGTACA | 1 cut(s) | 1462 |
| Bsp143I | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| BspACI | CCGC | 2 cut(s) | 1136, 1178 |
| BspANI | GGCC | 3 cut(s) | 939, 1243, 1253 |
| BspCNI | CTCAG | 3 cut(s) | 28, 1374, 1471 |
| BspHI | TCATGA | 1 cut(s) | 906 |
| BspLI | GGNNCC | 2 cut(s) | 670, 974 |
| BspMI | ACCTGC | 1 cut(s) | 1171 |
| BspPI | GGATC | 3 cut(s) | 944, 1002, 1551 |
| BsrDI | GCAATG | 2 cut(s) | 1084, 1400 |
| BsrGI | TGTACA | 1 cut(s) | 1462 |
| BsrI | ACTGG | 3 cut(s) | 739, 953, 1364 |
| BssECI | CCNNGG | 4 cut(s) | 448, 602, 1042, 1350 |
| BssMI | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| BssNI | GRCGYC | 1 cut(s) | 1014 |
| BssSI | CACGAG | 1 cut(s) | 189 |
| BssT1I | CCWWGG | 3 cut(s) | 448, 602, 1350 |
| Bst2BI | CACGAG | 1 cut(s) | 189 |
| Bst2UI | CCWGG | 3 cut(s) | 684, 1043, 1099 |
| Bst4CI | ACNGT | 6 cut(s) | 78, 349, 824, 927, 1225, 1268 |
| Bst6I | CTCTTC | 6 cut(s) | 36, 50, 56, 123, 153, 246 |
| BstACI | GRCGYC | 1 cut(s) | 1014 |
| BstAUI | TGTACA | 1 cut(s) | 1462 |
| BstC8I | GCNNGC | 6 cut(s) | 186, 855, 900, 916, 1018, 1251 |
| BstDEI | CTNAG | 6 cut(s) | 36, 764, 998, 1245, 1382, 1479 |
| BstF5I | GGATG | 3 cut(s) | 583, 1026, 1107 |
| BstHHI | GCGC | 1 cut(s) | 1512 |
| BstKTI | GATC | 4 cut(s) | 561, 952, 997, 1546 |
| BstMAI | GTCTC | 4 cut(s) | 286, 471, 813, 1553 |
| BstMBI | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| BstNI | CCWGG | 3 cut(s) | 684, 1043, 1099 |
| BstNSI | RCATGY | 2 cut(s) | 857, 1600 |
| BstSCI | CCNGG | 3 cut(s) | 682, 1041, 1097 |
| BstV1I | GCAGC | 1 cut(s) | 1519 |
| BstV2I | GAAGAC | 1 cut(s) | 533 |
| BstX2I | RGATCY | 3 cut(s) | 949, 994, 1543 |
| BstYI | RGATCY | 3 cut(s) | 949, 994, 1543 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1479 |
| BsuI | GTATCC | 1 cut(s) | 1481 |
| BsuRI | GGCC | 3 cut(s) | 939, 1243, 1253 |
| BtsCI | GGATG | 3 cut(s) | 583, 1026, 1107 |
| BtsI | GCAGTG | 2 cut(s) | 653, 799 |
| BtsIMutI | CAGTG | 3 cut(s) | 653, 799, 1371 |
| BveI | ACCTGC | 1 cut(s) | 1171 |
| Cac8I | GCNNGC | 6 cut(s) | 186, 855, 900, 916, 1018, 1251 |
| CciI | TCATGA | 1 cut(s) | 906 |
| CfoI | GCGC | 1 cut(s) | 1512 |
| CseI | GACGC | 1 cut(s) | 1022 |
| Csp6I | GTAC | 3 cut(s) | 442, 1463, 1531 |
| CviQI | GTAC | 3 cut(s) | 442, 1463, 1531 |
| DdeI | CTNAG | 6 cut(s) | 36, 764, 998, 1245, 1382, 1479 |
| DpnI | GATC | 4 cut(s) | 560, 951, 996, 1545 |
| DpnII | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| DraI | TTTAAA | 2 cut(s) | 597, 868 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 879 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 879 |
| EaeI | YGGCCR | 2 cut(s) | 937, 1251 |
| Eam1104I | CTCTTC | 6 cut(s) | 36, 50, 56, 123, 153, 246 |
| EarI | CTCTTC | 6 cut(s) | 36, 50, 56, 123, 153, 246 |
| Eco130I | CCWWGG | 3 cut(s) | 448, 602, 1350 |
| Eco24I | GRGCYC | 1 cut(s) | 661 |
| Eco57I | CTGAAG | 1 cut(s) | 1477 |
| Eco81I | CCTNAGG | 1 cut(s) | 1479 |
| EcoRI | GAATTC | 1 cut(s) | 890 |
| EcoRII | CCWGG | 3 cut(s) | 682, 1041, 1097 |
| EcoT14I | CCWWGG | 3 cut(s) | 448, 602, 1350 |
| EcoT38I | GRGCYC | 1 cut(s) | 661 |
| ErhI | CCWWGG | 3 cut(s) | 448, 602, 1350 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1310, 1342 |
| FauNDI | CATATG | 1 cut(s) | 1302 |
| Fnu4HI | GCNGC | 1 cut(s) | 1508 |
| FokI | GGATG | 3 cut(s) | 590, 1013, 1114 |
| FriOI | GRGCYC | 1 cut(s) | 661 |
| Fsp4HI | GCNGC | 1 cut(s) | 1508 |
| FspBI | CTAG | 4 cut(s) | 101, 654, 1124, 1407 |
| GlaI | GCGC | 1 cut(s) | 1511 |
| GluI | GCNGC | 1 cut(s) | 1508 |
| GsuI | CTGGAG | 1 cut(s) | 1081 |
| HaeIII | GGCC | 3 cut(s) | 939, 1243, 1253 |
| HgaI | GACGC | 1 cut(s) | 1022 |
| HhaI | GCGC | 1 cut(s) | 1512 |
| Hin1I | GRCGYC | 1 cut(s) | 1014 |
| Hin6I | GCGC | 1 cut(s) | 1510 |
| HinP1I | GCGC | 1 cut(s) | 1510 |
| HincII | GTYRAC | 1 cut(s) | 1357 |
| HindII | GTYRAC | 1 cut(s) | 1357 |
| HinfI | GANTC | 3 cut(s) | 83, 880, 1497 |
| HpaI | GTTAAC | 1 cut(s) | 1357 |
| HphI | GGTGA | 4 cut(s) | 20, 78, 812, 1058 |
| Hpy166II | GTNNAC | 5 cut(s) | 508, 625, 820, 884, 1357 |
| Hpy188I | TCNGA | 9 cut(s) | 37, 82, 411, 522, 673, 949, 1113, 1496, 1588 |
| Hpy188III | TCNNGA | 9 cut(s) | 248, 283, 341, 545, 662, 785, 907, 1124, 1315 |
| Hpy8I | GTNNAC | 5 cut(s) | 508, 625, 820, 884, 1357 |
| Hpy99I | CGWCG | 1 cut(s) | 269 |
| HpyAV | CCTTC | 5 cut(s) | 280, 523, 579, 1363, 1412 |
| HpyCH4III | ACNGT | 6 cut(s) | 78, 349, 824, 927, 1225, 1268 |
| HpyCH4IV | ACGT | 1 cut(s) | 504 |
| HpyCH4V | TGCA | 7 cut(s) | 804, 898, 988, 1507, 1540, 1556, 1600 |
| HpyF3I | CTNAG | 6 cut(s) | 36, 764, 998, 1245, 1382, 1479 |
| HpySE526I | ACGT | 1 cut(s) | 504 |
| Hsp92I | GRCGYC | 1 cut(s) | 1014 |
| HspAI | GCGC | 1 cut(s) | 1510 |
| KspAI | GTTAAC | 1 cut(s) | 1357 |
| Kzo9I | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| LmnI | GCTCC | 3 cut(s) | 674, 978, 1378 |
| Lsp1109I | GCAGC | 1 cut(s) | 1519 |
| LweI | GCATC | 2 cut(s) | 1104, 1527 |
| MaeI | CTAG | 4 cut(s) | 101, 654, 1124, 1407 |
| MaeII | ACGT | 1 cut(s) | 504 |
| MaeIII | GTNAC | 7 cut(s) | 224, 551, 730, 754, 1225, 1286, 1515 |
| MalI | GATC | 4 cut(s) | 560, 951, 996, 1545 |
| MboI | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| MflI | RGATCY | 3 cut(s) | 949, 994, 1543 |
| MhlI | GDGCHC | 3 cut(s) | 619, 661, 1414 |
| MlsI | TGGCCA | 2 cut(s) | 939, 1253 |
| MluCI | AATT | 3 cut(s) | 769, 790, 890 |
| MluNI | TGGCCA | 2 cut(s) | 939, 1253 |
| MlyI | GAGTC | 2 cut(s) | 889, 1506 |
| MmeI | TCCRAC | 3 cut(s) | 345, 696, 1032 |
| Mox20I | TGGCCA | 2 cut(s) | 939, 1253 |
| MroXI | GAANNNNTTC | 4 cut(s) | 301, 443, 773, 1325 |
| MscI | TGGCCA | 2 cut(s) | 939, 1253 |
| MseI | TTAA | 5 cut(s) | 21, 351, 596, 867, 1356 |
| Msp20I | TGGCCA | 2 cut(s) | 939, 1253 |
| MspR9I | CCNGG | 3 cut(s) | 684, 1043, 1099 |
| Mva1269I | GAATGC | 1 cut(s) | 301 |
| MvaI | CCWGG | 3 cut(s) | 684, 1043, 1099 |
| NdeI | CATATG | 1 cut(s) | 1302 |
| NdeII | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| NlaIV | GGNNCC | 2 cut(s) | 670, 974 |
| NmuCI | GTSAC | 2 cut(s) | 1225, 1515 |
| NspI | RCATGY | 2 cut(s) | 857, 1600 |
| PaeI | GCATGC | 1 cut(s) | 857 |
| PagI | TCATGA | 1 cut(s) | 906 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 264 |
| PctI | GAATGC | 1 cut(s) | 301 |
| PdmI | GAANNNNTTC | 4 cut(s) | 301, 443, 773, 1325 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PfoI | TCCNGGA | 2 cut(s) | 682, 1097 |
| PkrI | GCNGC | 1 cut(s) | 1509 |
| PleI | GAGTC | 2 cut(s) | 888, 1505 |
| PpsI | GAGTC | 2 cut(s) | 888, 1505 |
| Psp6I | CCWGG | 3 cut(s) | 682, 1041, 1097 |
| PspGI | CCWGG | 3 cut(s) | 682, 1041, 1097 |
| PspN4I | GGNNCC | 2 cut(s) | 670, 974 |
| PsuI | RGATCY | 3 cut(s) | 949, 994, 1543 |
| RsaI | GTAC | 3 cut(s) | 443, 1464, 1532 |
| RsaNI | GTAC | 3 cut(s) | 442, 1463, 1531 |
| SaqAI | TTAA | 5 cut(s) | 21, 351, 596, 867, 1356 |
| SatI | GCNGC | 1 cut(s) | 1508 |
| Sau3AI | GATC | 4 cut(s) | 558, 949, 994, 1543 |
| ScaI | AGTACT | 1 cut(s) | 443 |
| SchI | GAGTC | 2 cut(s) | 889, 1506 |
| ScrFI | CCNGG | 3 cut(s) | 684, 1043, 1099 |
| SduI | GDGCHC | 3 cut(s) | 619, 661, 1414 |
| SfaNI | GCATC | 2 cut(s) | 1104, 1527 |
| SmlI | CTYRAG | 1 cut(s) | 246 |
| SmoI | CTYRAG | 1 cut(s) | 246 |
| SphI | GCATGC | 1 cut(s) | 857 |
| Sse9I | AATT | 3 cut(s) | 769, 790, 890 |
| SsiI | CCGC | 2 cut(s) | 1136, 1178 |
| SspMI | CTAG | 4 cut(s) | 101, 654, 1124, 1407 |
| StyD4I | CCNGG | 3 cut(s) | 682, 1041, 1097 |
| StyI | CCWWGG | 3 cut(s) | 448, 602, 1350 |
| TaaI | ACNGT | 6 cut(s) | 78, 349, 824, 927, 1225, 1268 |
| TaiI | ACGT | 1 cut(s) | 507 |
| TaqI | TCGA | 3 cut(s) | 258, 284, 859 |
| TaqII | GACCGA | 1 cut(s) | 1109 |
| TasI | AATT | 3 cut(s) | 769, 790, 890 |
| TatI | WGTACW | 2 cut(s) | 441, 1462 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| Tru1I | TTAA | 5 cut(s) | 21, 351, 596, 867, 1356 |
| Tru9I | TTAA | 5 cut(s) | 21, 351, 596, 867, 1356 |
| TscAI | CASTG | 3 cut(s) | 653, 806, 1371 |
| TseFI | GTSAC | 2 cut(s) | 1225, 1515 |
| TseI | GCWGC | 1 cut(s) | 1507 |
| Tsp45I | GTSAC | 2 cut(s) | 1225, 1515 |
| TspDTI | ATGAA | 5 cut(s) | 17, 903, 923, 1095, 1538 |
| TspGWI | ACGGA | 1 cut(s) | 1500 |
| TspRI | CASTG | 3 cut(s) | 653, 806, 1371 |
| XapI | RAATTY | 2 cut(s) | 769, 890 |
| XbaI | TCTAGA | 1 cut(s) | 1123 |
| XceI | RCATGY | 2 cut(s) | 857, 1600 |
| XmnI | GAANNNNTTC | 4 cut(s) | 301, 443, 773, 1325 |
| XspI | CTAG | 4 cut(s) | 101, 654, 1124, 1407 |
| ZrmI | AGTACT | 1 cut(s) | 443 |