Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002617

Physical Location & Seq

Genomic Coordinates Reverse (-)

95699118 .. 95705420

Gene Structure 6303 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00074880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGAGTTCGAAGAGAGAGCATGAAGATAATGGTGGTGGGGGTATTGAAGAGGAAGGGAGTTTATTGGAGGCAAAGAGGCAGAAAGTGAATGAGGAAGTATCTCCCGACTCTTCGCCGCCTGCCTCCCTTCTTCCTGGTTTTAATTATGGGGACGAGGATGAGGAGGAGAGAAGGGCACCTGTTAATGGAGGGGTGATGGTAAGGAGCTACAGGCTGGAAAAAATGGGGTTCGAGTTGAAGAAGAAGAAGAGGATGATGGTGAACAAGGACTTTATCAAGGACACAGGAGCCGCGAAATTGAAGTTAGGAGGGATTGCCCGTATCTTGATGCTGTTAATCGCCAGAGGAAGGAAGTCCCATGCATATACTCATAGCCTTGAAGCAGGACACCATGTGTATATCAATCTTCGAACAGAGAAGGTTTATTGCCTTCCTGATGGATATGAAATTAGTGACCCATCATTGGATGACATTCGACATGTTCTGAACCCAAGGTTTACTGAGGAACAGGTTGAGCAGATTGACAAAAACAAGCAGTGGTCAAGGGCCCTTGATGGTTCTGATTACCTTCCTGGAATGGTGGGGCTAAATAACATTAAGGAGACTGATTTTGTGAATGTCACTATTCAATCCTTAATGAGAGTTACGCCTTTAAGAAACTTTTTTCTTATCCCAAAGAACTATCAACATTGCAAATCTCCACTTGTTCATCGATTTGGGGAGCTTACAAGAAAGATATGGCATGCACGCAACTTTAAAGGACAGGTGAGCCCGCATGAGTTCCTGCAGGCAGTTATGAAAGCCAGTAAGAAACGGTTTCGAATAGGAGCTCAGTCTGACCCTGTTGAGTTCATGTCATGGATGCTCAATACACTTCATGCAGATCTTAAAACTAAGAAGAATACCAGCATCATTTATGACTGCTTTCAGGGGGAACTAGAGGTTGTCAAGGAGACCCACAAGAATACAGATGGAGGAACTGAATACAAGGGCCTTGTCACAGAAACTTACAGAATGCCTTTCTTAATGCTTGGATTGGATTTGCCCCCACCACCTCTTTTTAAAGATGTGATGGAGAAAAACATCATACCACAGGTCCCGCTGTTCAACATTTTGAAGAAATTTGATGGTGAGACTGTTACTGAAATCGTCCGGCCTCGCATAGCAAGGACGAGGTATCGCGTTACTAGATTACCACGGTATCTAATTCTGCACATGCAACGATTCACAAAGAACAACTTCTTTGTGGAGAAGAATCCTACTCTAGTCAACTTTCCTGTGAAGAACCTGGAATTGAGAGATTACATTCCTTTGCCAACCCCCAAGGAGAATGAGAGATTGCGTTCAAAGTATGATTTGATTGCCAACATTGTTCATGATGGTAAACCTGGTGAAGGGTCCTACAGAGTATTTGTACAGCGAAAGTCAGAAGAACTATGGTATGAGATGCAGGATCTTCATGTCTCAGAAACACTTCCTCAGATGGTTGCTCTTTCCGAGGCTTATATGCAGATATATGAGCAGCAGCACAAAGGCCTGGACAAGTCTGCTGGCCCCTTATTAATAACCAGTCGTTCCAGACTCATCTTTTGCTTCACGACTCCAAAAAAATATCTCCCATTTGAAGCTGTCATCTTCTCTGGCTCTCTGCTTTCTTTATTTATCTGGTCCAACATCCAAACTGCCAGTCTGATCTCAGGTCAAGTTATCCGAATTTTCGATGCATTTACTGATCGTGTCGCCATTTTGGATCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

585

Amino Acids

67.37

Weight (kDa)

9.13

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UBP	PF02148	115 - 154	9e-09	Zn-finger in ubiquitin-hydrolases and other protein
UCH	PF00443	194 - 506	2.3e-44	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002617)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22285 AT4G22285 AT4G22350 AT4G22350 AT4G22350 AT4G22350 AT4G22410 AT4G22410
fragaria_vesca	FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_6g03150
malus_domestica	MD05G1357700.v1.1 MD10G1331700.v1.1
prunus_persica	Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1
pyrus_communis	pycom05g32360 pycom10g28130
rosa_chinensis	RchiOBHm_Chr4g0397451 RchiOBHm_Chr5g0001501 RchiOBHm_Chr5g0001511
rosa_laevigata	RLG00000030934
rosa_multiflora	Rmu_sc0003749.1_g000009
rosa_roxburghii	Rroxscaffold_1G00074880
rosa_rugosa	Rorug04G0390700
rosa_samantha	Rh5AG011700 Rh5BG014200 Rh5CG012700 Rh5DG012000
rosa_wichuraiana	Rw5G001110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	175
AccII	CGCG	2 cut(s)	293, 1182
AciI	CCGC	4 cut(s)	116, 291, 773, 1100
AclWI	GGATC	2 cut(s)	1461, 1745
AcsI	RAATTY	2 cut(s)	1121, 1713
AdeI	CACNNNGTG	1 cut(s)	394
AfaI	GTAC	1 cut(s)	1416
AfiI	CCNNNNNNNGG	4 cut(s)	185, 348, 463, 1394
AflIII	ACRYGT	1 cut(s)	478
AgsI	TTSAA	9 cut(s)	47, 238, 301, 380, 629, 1108, 1117, 1347, 1625
AjnI	CCWGG	5 cut(s)	133, 571, 1287, 1387, 1536
AluBI	AGCT	4 cut(s)	207, 724, 830, 1628
AluI	AGCT	4 cut(s)	207, 724, 830, 1628
Alw21I	GWGCWC	1 cut(s)	832
Alw26I	GTCTC	4 cut(s)	596, 947, 1127, 1468
AlwI	GGATC	2 cut(s)	1461, 1745
AoxI	GGCC	5 cut(s)	546, 991, 1154, 1534, 1552
ApaI	GGGCCC	1 cut(s)	550
ApeKI	GCWGC	2 cut(s)	1522, 1525
ApoI	RAATTY	2 cut(s)	1121, 1713
ArsI	GACNNNNNNTTYG	4 cut(s)	1572, 1604, 1672, 1704
AseI	ATTAAT	1 cut(s)	1562
Asp700I	GAANNNNTTC	2 cut(s)	1238, 1473
AspS9I	GGNCC	7 cut(s)	546, 547, 991, 1096, 1398, 1553, 1668
AsuHPI	GGTGA	5 cut(s)	205, 271, 778, 1142, 1403
AsuII	TTCGAA	3 cut(s)	8, 409, 820
AvaII	GGWCC	3 cut(s)	1096, 1398, 1668
BaeGI	GKGCMC	2 cut(s)	178, 550
BaeI	ACNNNNGTAYC	2 cut(s)	1184, 1217
BamHI	GGATCC	1 cut(s)	1750
BanI	GGYRCC	1 cut(s)	175
BanII	GRGCYC	3 cut(s)	550, 773, 832
Bbv12I	GWGCWC	1 cut(s)	832
BbvI	GCAGC	2 cut(s)	1534, 1537
BciT130I	CCWGG	5 cut(s)	135, 573, 1289, 1389, 1538
BcoDI	GTCTC	4 cut(s)	596, 947, 1127, 1468
BfaI	CTAG	3 cut(s)	938, 1188, 1265
BfmI	CTRYAG	3 cut(s)	208, 785, 1402
BglII	AGATCT	1 cut(s)	883
BisI	GCNGC	4 cut(s)	116, 291, 1523, 1526
BlsI	GCNGC	4 cut(s)	117, 292, 1524, 1527
Bme1390I	CCNGG	5 cut(s)	135, 573, 1289, 1389, 1538
Bme18I	GGWCC	3 cut(s)	1096, 1398, 1668
BmgT120I	GGNCC	7 cut(s)	546, 547, 991, 1096, 1398, 1553, 1668
BmiI	GGNNCC	7 cut(s)	177, 289, 548, 1098, 1399, 1555, 1752
BmrFI	CCNGG	5 cut(s)	135, 573, 1289, 1389, 1538
BmsI	GCATC	5 cut(s)	318, 852, 918, 1437, 1711
Bpu14I	TTCGAA	3 cut(s)	8, 409, 820
Bsa29I	ATCGAT	1 cut(s)	712
BsaI	GGTCTC	1 cut(s)	947
BsaJI	CCNNGG	4 cut(s)	491, 1196, 1323, 1497
Bsc4I	CCNNNNNNNGG	4 cut(s)	185, 348, 463, 1394
Bse1I	ACTGG	3 cut(s)	804, 1569, 1686
Bse3DI	GCAATG	1 cut(s)	688
BseBI	CCWGG	5 cut(s)	135, 573, 1289, 1389, 1538
BseCI	ATCGAT	1 cut(s)	712
BseDI	CCNNGG	4 cut(s)	491, 1196, 1323, 1497
BseGI	GGATG	5 cut(s)	163, 258, 472, 867, 1674
BseLI	CCNNNNNNNGG	4 cut(s)	185, 348, 463, 1394
BseMI	GCAATG	1 cut(s)	688
BseMII	CTCAG	5 cut(s)	492, 845, 1479, 1493, 1710
BseNI	ACTGG	3 cut(s)	804, 1569, 1686
BseRI	GAGGAG	2 cut(s)	176, 179
BseSI	GKGCMC	2 cut(s)	178, 550
BseXI	GCAGC	2 cut(s)	1534, 1537
BsgI	GTGCAG	1 cut(s)	1196
Bsh1236I	CGCG	2 cut(s)	293, 1182
BshFI	GGCC	5 cut(s)	548, 993, 1156, 1536, 1554
BshNI	GGYRCC	1 cut(s)	175
BshVI	ATCGAT	1 cut(s)	712
BsiHKAI	GWGCWC	1 cut(s)	832
BsiSI	CCGG	1 cut(s)	1153
BslFI	GGGAC	3 cut(s)	164, 340, 1082
BslI	CCNNNNNNNGG	4 cut(s)	185, 348, 463, 1394
BsmAI	GTCTC	4 cut(s)	596, 947, 1127, 1468
BsmFI	GGGAC	3 cut(s)	164, 340, 1082
BsmI	GAATGC	1 cut(s)	1020
BsnI	GGCC	5 cut(s)	548, 993, 1156, 1536, 1554
Bso31I	GGTCTC	1 cut(s)	947
Bsp119I	TTCGAA	3 cut(s)	8, 409, 820
Bsp120I	GGGCCC	1 cut(s)	546
Bsp1286I	GDGCHC	4 cut(s)	178, 550, 773, 832
Bsp1407I	TGTACA	1 cut(s)	1414
Bsp143I	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
BspACI	CCGC	4 cut(s)	116, 291, 773, 1100
BspANI	GGCC	5 cut(s)	548, 993, 1156, 1536, 1554
BspCNI	CTCAG	5 cut(s)	493, 844, 1478, 1492, 1709
BspDI	ATCGAT	1 cut(s)	712
BspFNI	CGCG	2 cut(s)	293, 1182
BspHI	TCATGA	1 cut(s)	1375
BspLI	GGNNCC	7 cut(s)	177, 289, 548, 1098, 1399, 1555, 1752
BspMAI	CTGCAG	1 cut(s)	789
BspPI	GGATC	2 cut(s)	1461, 1745
BspT104I	TTCGAA	3 cut(s)	8, 409, 820
BspT107I	GGYRCC	1 cut(s)	175
BspTNI	GGTCTC	1 cut(s)	947
BsrDI	GCAATG	1 cut(s)	688
BsrGI	TGTACA	1 cut(s)	1414
BsrI	ACTGG	3 cut(s)	804, 1569, 1686
BssECI	CCNNGG	4 cut(s)	491, 1196, 1323, 1497
BssMI	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
BssT1I	CCWWGG	2 cut(s)	491, 1323
Bst2UI	CCWGG	5 cut(s)	135, 573, 1289, 1389, 1538
Bst4CI	ACNGT	3 cut(s)	816, 1138, 1200
Bst6I	CTCTTC	4 cut(s)	5, 42, 115, 242
BstAUI	TGTACA	1 cut(s)	1414
BstBI	TTCGAA	3 cut(s)	8, 409, 820
BstC8I	GCNNGC	6 cut(s)	120, 744, 748, 773, 789, 1552
BstDEI	CTNAG	6 cut(s)	501, 831, 894, 1465, 1479, 1696
BstDSI	CCRYGG	1 cut(s)	1196
BstENI	CCTNNNNNAGG	1 cut(s)	1392
BstF5I	GGATG	5 cut(s)	163, 258, 472, 867, 1674
BstFNI	CGCG	2 cut(s)	293, 1182
BstKTI	GATC	5 cut(s)	886, 1456, 1695, 1735, 1753
BstMAI	GTCTC	4 cut(s)	596, 947, 1127, 1468
BstMBI	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
BstNI	CCWGG	5 cut(s)	135, 573, 1289, 1389, 1538
BstNSI	RCATGY	3 cut(s)	482, 746, 1219
BstSCI	CCNGG	5 cut(s)	133, 571, 1287, 1387, 1536
BstSFI	CTRYAG	3 cut(s)	208, 785, 1402
BstSLI	GKGCMC	2 cut(s)	178, 550
BstUI	CGCG	2 cut(s)	293, 1182
BstV1I	GCAGC	2 cut(s)	1534, 1537
BstX2I	RGATCY	3 cut(s)	883, 1453, 1750
BstYI	RGATCY	3 cut(s)	883, 1453, 1750
Bsu15I	ATCGAT	1 cut(s)	712
BsuRI	GGCC	5 cut(s)	548, 993, 1156, 1536, 1554
BsuTUI	ATCGAT	1 cut(s)	712
BtgI	CCRYGG	1 cut(s)	1196
BtsCI	GGATG	5 cut(s)	163, 258, 472, 867, 1674
BtsI	GCAGTG	1 cut(s)	542
BtsIMutI	CAGTG	1 cut(s)	542
Cac8I	GCNNGC	6 cut(s)	120, 744, 748, 773, 789, 1552
CciI	TCATGA	1 cut(s)	1375
Cfr13I	GGNCC	7 cut(s)	546, 547, 991, 1096, 1398, 1553, 1668
ClaI	ATCGAT	1 cut(s)	712
CsiI	ACCWGGT	1 cut(s)	1387
Csp6I	GTAC	1 cut(s)	1415
CviQI	GTAC	1 cut(s)	1415
DdeI	CTNAG	6 cut(s)	501, 831, 894, 1465, 1479, 1696
DpnI	GATC	5 cut(s)	885, 1455, 1694, 1734, 1752
DpnII	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
DraI	TTTAAA	2 cut(s)	757, 1063
DraIII	CACNNNGTG	1 cut(s)	394
Eam1104I	CTCTTC	4 cut(s)	5, 42, 115, 242
EarI	CTCTTC	4 cut(s)	5, 42, 115, 242
Ecl136II	GAGCTC	1 cut(s)	830
Eco130I	CCWWGG	2 cut(s)	491, 1323
Eco147I	AGGCCT	1 cut(s)	1536
Eco24I	GRGCYC	3 cut(s)	550, 773, 832
Eco31I	GGTCTC	1 cut(s)	947
Eco47I	GGWCC	3 cut(s)	1096, 1398, 1668
Eco53kI	GAGCTC	1 cut(s)	830
EcoICRI	GAGCTC	1 cut(s)	830
EcoNI	CCTNNNNNAGG	1 cut(s)	1392
EcoO109I	RGGNCCY	5 cut(s)	546, 547, 991, 1096, 1398
EcoRII	CCWGG	5 cut(s)	133, 571, 1287, 1387, 1536
EcoT14I	CCWWGG	2 cut(s)	491, 1323
EcoT22I	ATGCAT	2 cut(s)	364, 1726
EcoT38I	GRGCYC	3 cut(s)	550, 773, 832
ErhI	CCWWGG	2 cut(s)	491, 1323
FalI	AAGNNNNNCTT	2 cut(s)	1223, 1255
FaqI	GGGAC	3 cut(s)	164, 340, 1082
FauI	CCCGC	2 cut(s)	780, 1107
Fnu4HI	GCNGC	4 cut(s)	116, 291, 1523, 1526
FokI	GGATG	5 cut(s)	170, 265, 479, 874, 1661
FriOI	GRGCYC	3 cut(s)	550, 773, 832
Fsp4HI	GCNGC	4 cut(s)	116, 291, 1523, 1526
FspBI	CTAG	3 cut(s)	938, 1188, 1265
GluI	GCNGC	4 cut(s)	116, 291, 1523, 1526
HaeIII	GGCC	5 cut(s)	548, 993, 1156, 1536, 1554
HapII	CCGG	1 cut(s)	1153
HincII	GTYRAC	1 cut(s)	1270
HindII	GTYRAC	1 cut(s)	1270
HinfI	GANTC	5 cut(s)	107, 1224, 1255, 1581, 1600
HpaII	CCGG	1 cut(s)	1153
HphI	GGTGA	5 cut(s)	205, 271, 778, 1142, 1403
Hpy166II	GTNNAC	4 cut(s)	262, 498, 1270, 1385
Hpy188I	TCNGA	9 cut(s)	486, 562, 838, 1429, 1468, 1482, 1498, 1692, 1712
Hpy188III	TCNNGA	6 cut(s)	104, 325, 434, 1376, 1578, 1597
Hpy8I	GTNNAC	4 cut(s)	262, 498, 1270, 1385
HpyAV	CCTTC	8 cut(s)	47, 137, 165, 342, 412, 440, 578, 1388
HpyCH4III	ACNGT	3 cut(s)	816, 1138, 1200
HpyF3I	CTNAG	6 cut(s)	501, 831, 894, 1465, 1479, 1696
Kzo9I	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
LmnI	GCTCC	4 cut(s)	204, 287, 721, 827
Lsp1109I	GCAGC	2 cut(s)	1534, 1537
LweI	GCATC	5 cut(s)	318, 852, 918, 1437, 1711
MabI	ACCWGGT	1 cut(s)	1387
MaeI	CTAG	3 cut(s)	938, 1188, 1265
MaeIII	GTNAC	6 cut(s)	452, 619, 643, 997, 1138, 1183
MalI	GATC	5 cut(s)	885, 1455, 1694, 1734, 1752
MboI	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
MflI	RGATCY	3 cut(s)	883, 1453, 1750
MhlI	GDGCHC	4 cut(s)	178, 550, 773, 832
MluCI	AATT	7 cut(s)	142, 296, 447, 1121, 1206, 1292, 1713
MlyI	GAGTC	3 cut(s)	101, 1575, 1594
MmeI	TCCRAC	1 cut(s)	1695
Mph1103I	ATGCAT	2 cut(s)	364, 1726
MroXI	GAANNNNTTC	2 cut(s)	1238, 1473
MspA1I	CMGCKG	1 cut(s)	1102
MspI	CCGG	1 cut(s)	1153
MspR9I	CCNGG	5 cut(s)	135, 573, 1289, 1389, 1538
Mva1269I	GAATGC	1 cut(s)	1020
MvaI	CCWGG	5 cut(s)	135, 573, 1289, 1389, 1538
MvnI	CGCG	2 cut(s)	293, 1182
NdeII	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
NlaIV	GGNNCC	7 cut(s)	177, 289, 548, 1098, 1399, 1555, 1752
NmuCI	GTSAC	3 cut(s)	452, 619, 997
NsiI	ATGCAT	2 cut(s)	364, 1726
NspI	RCATGY	3 cut(s)	482, 746, 1219
NspV	TTCGAA	3 cut(s)	8, 409, 820
PaeI	GCATGC	1 cut(s)	746
PagI	TCATGA	1 cut(s)	1375
PceI	AGGCCT	1 cut(s)	1536
PciI	ACATGT	1 cut(s)	478
PctI	GAATGC	1 cut(s)	1020
PdmI	GAANNNNTTC	2 cut(s)	1238, 1473
PfeI	GAWTC	2 cut(s)	1224, 1255
PfoI	TCCNGGA	1 cut(s)	571
PkrI	GCNGC	4 cut(s)	117, 292, 1524, 1527
PleI	GAGTC	3 cut(s)	101, 1575, 1594
PpsI	GAGTC	3 cut(s)	101, 1575, 1594
PpuMI	RGGWCCY	2 cut(s)	1096, 1398
PscI	ACATGT	1 cut(s)	478
PshBI	ATTAAT	1 cut(s)	1562
Psp124BI	GAGCTC	1 cut(s)	832
Psp5II	RGGWCCY	2 cut(s)	1096, 1398
Psp6I	CCWGG	5 cut(s)	133, 571, 1287, 1387, 1536
PspGI	CCWGG	5 cut(s)	133, 571, 1287, 1387, 1536
PspN4I	GGNNCC	7 cut(s)	177, 289, 548, 1098, 1399, 1555, 1752
PspOMI	GGGCCC	1 cut(s)	546
PspPI	GGNCC	7 cut(s)	546, 547, 991, 1096, 1398, 1553, 1668
PspPPI	RGGWCCY	2 cut(s)	1096, 1398
PstI	CTGCAG	1 cut(s)	789
PsuI	RGATCY	3 cut(s)	883, 1453, 1750
RsaI	GTAC	1 cut(s)	1416
RsaNI	GTAC	1 cut(s)	1415
SacI	GAGCTC	1 cut(s)	832
SatI	GCNGC	4 cut(s)	116, 291, 1523, 1526
Sau3AI	GATC	5 cut(s)	883, 1453, 1692, 1732, 1750
Sau96I	GGNCC	7 cut(s)	546, 547, 991, 1096, 1398, 1553, 1668
SbfI	CCTGCAGG	1 cut(s)	789
SchI	GAGTC	3 cut(s)	101, 1575, 1594
ScrFI	CCNGG	5 cut(s)	135, 573, 1289, 1389, 1538
SdaI	CCTGCAGG	1 cut(s)	789
SduI	GDGCHC	4 cut(s)	178, 550, 773, 832
SexAI	ACCWGGT	1 cut(s)	1387
SfaNI	GCATC	5 cut(s)	318, 852, 918, 1437, 1711
SfcI	CTRYAG	3 cut(s)	208, 785, 1402
SfuI	TTCGAA	3 cut(s)	8, 409, 820
SinI	GGWCC	3 cut(s)	1096, 1398, 1668
SphI	GCATGC	1 cut(s)	746
Sse8387I	CCTGCAGG	1 cut(s)	789
Sse9I	AATT	7 cut(s)	142, 296, 447, 1121, 1206, 1292, 1713
SseBI	AGGCCT	1 cut(s)	1536
SsiI	CCGC	4 cut(s)	116, 291, 773, 1100
SspMI	CTAG	3 cut(s)	938, 1188, 1265
SstI	GAGCTC	1 cut(s)	832
StuI	AGGCCT	1 cut(s)	1536
StyD4I	CCNGG	5 cut(s)	133, 571, 1287, 1387, 1536
StyI	CCWWGG	2 cut(s)	491, 1323
TaaI	ACNGT	3 cut(s)	816, 1138, 1200
TaqI	TCGA	7 cut(s)	8, 231, 409, 475, 712, 820, 1719
TasI	AATT	7 cut(s)	142, 296, 447, 1121, 1206, 1292, 1713
TatI	WGTACW	1 cut(s)	1414
TauI	GCSGC	2 cut(s)	118, 293
TfiI	GAWTC	2 cut(s)	1224, 1255
TscAI	CASTG	1 cut(s)	542
TseFI	GTSAC	3 cut(s)	452, 619, 997
TseI	GCWGC	2 cut(s)	1522, 1525
Tsp45I	GTSAC	3 cut(s)	452, 619, 997
TspDTI	ATGAA	8 cut(s)	36, 459, 698, 812, 841, 866, 1364, 1448
TspRI	CASTG	1 cut(s)	542
VpaK11BI	GGWCC	3 cut(s)	1096, 1398, 1668
VspI	ATTAAT	1 cut(s)	1562
XagI	CCTNNNNNAGG	1 cut(s)	1392
XapI	RAATTY	2 cut(s)	1121, 1713
XceI	RCATGY	3 cut(s)	482, 746, 1219
XmnI	GAANNNNTTC	2 cut(s)	1238, 1473
XspI	CTAG	3 cut(s)	938, 1188, 1265
Zsp2I	ATGCAT	2 cut(s)	364, 1726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.