Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002617

Physical Location & Seq

Genomic Coordinates Reverse (-)

47332069 .. 47336052

Gene Structure 3984 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1357700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGAGCTCTAAGAGGGAACATGAAGGTAATGCTAGTGTGAACATGGAAGGGTTTGAATCGGACCGAAAGAGGCAAAAACTAAATGAGCATTCGTTGCAGCCACCTGCCACTGAAGGCACTTTACTTCCGGGTTTTAATTACGGCGATGTGGAAGACGAGGACAACCACAGAAGGCCACCTGTGAATGGCTCTAATGGGGTAGGTGGCGCTAATCAAAAGGGTGTACAAATTGGGGGTCAAGTTGAAGAAGTAGAGGATGATGATGATGATGACCTTGAACAAGGACTTTACCAAAGGCGGGGGCGTGAAATCGAGGTCAGGAGGGATTGCCCATATCTTGATGCCGTCAATCGTCAGGTTTTAGATTTTGATTTTGAGAAGTTCTGTTCTCTGTCCCTGTCAAATTTGAATGTGTATGCATGTTTGGTTTGTGGGAAATATTATCAAGGCAGAGGGAGGAAGTCCCATGCATATACTCATAGCCTTGAAGCCGGACACCATGTTTATATCAATCTTCAAACGGAGAAAGTTTATTGCCTTCCCGATGGATATGAAATAAGTGATCCATCATTGGATGATATTCGGCATGTCCTAAACCCAAGGTTTACTGAGGAACAAGTGGAGCAGATTGACAAAAACAAGCAATGGTCCAGGACACTTGATGGTTCCGATTACCTTCCTGGAATGGTGGGGCTCAATAACATTAAGGAGACTGATTTCGTGAATGTCACTATACAATCTTTAATGAGAGTCACTCCTCTAAGAAATTTTTTCCTTATCCCTAAGAATTATCAACACTGCAAGTCTCCGCTTGTTCATCGATTTGGGGAGCTAACAAGAAAGATATGGCATGCACGAAACTTCAAAGGACAGGTCAGCCCGCACGAGTTCCTACAGGCAGTTATGAAAGCCAGTAAGAAAAGGTTTCGAATTGGAGCACAGTCTGACCCAGTTGAATTCATGTCATGGCTGCTTAATACGCTGCATGCAGATCTTAGAACTTCGAAGAAAAATAGCAGCATCATATTTGAGTGCTTTCAGGGGGAACTGGAGGTTGTGAAGGAGATTCCTAATAAAGGTATTGAGAAAATAGAAAATGTTGATGACCAGAATACAGGTGCTGCTACTGCAAATAACGGTATCGTGAAGGAAACTTACAAAATGCCTTTCTTGATGCTTGGATTGGATTTGCCCCCACCACCGCTTTTCAAAGATGTGATGGAGAAAAATATAATACCCCAGGTCCCACTTTTCAACATTCTGAAGAAATTTGATGGAGAGACTATCACTGAAGTGGTCCGACCTCGCATATCAAGGATGAGGTATCGAGTCGCCCGATTACCTCAGTATCTTATTCTCCACATCCAACGTTTTACAAAGAACAATTTCTTTGTGGAGAAGAATCCGACTTTAGTGAACTTCCCTGTGAAGAATCTCGAATTGAAAGACTACATCCCATTGTCAACCACCAATGAGAATGAGAGGTTGCGCTCAAAGTATGATCTCATTGCCAACATTGTACATGATGGTAAACCTGGTGAAGGTTCCTACAGGGTGTTTGTACAAAGGAAGTCCGAAGAACAATGGTATGAGATGCAGGACCTTCACGTCTCCGAAACCCTTCCCCAAATGGTTGCACTGTCTGAGACATACATGCAGATATACGAGCAGCACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

560

Amino Acids

64.56

Weight (kDa)

6.14

Isoelectric Point (pI)

45.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UBP	PF02148	129 - 190	2.5e-19	Zn-finger in ubiquitin-hydrolases and other protein
UCH	PF00443	230 - 555	1.6e-44	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002617)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22285 AT4G22285 AT4G22350 AT4G22350 AT4G22350 AT4G22350 AT4G22410 AT4G22410
fragaria_vesca	FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_3g00980 FvH4_6g03150
malus_domestica	MD05G1357700.v1.1 MD10G1331700.v1.1
prunus_persica	Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1 Prupe.4G010400_v2.0.a1
pyrus_communis	pycom05g32360 pycom10g28130
rosa_chinensis	RchiOBHm_Chr4g0397451 RchiOBHm_Chr5g0001501 RchiOBHm_Chr5g0001511
rosa_laevigata	RLG00000030934
rosa_multiflora	Rmu_sc0003749.1_g000009
rosa_roxburghii	Rroxscaffold_1G00074880
rosa_rugosa	Rorug04G0390700
rosa_samantha	Rh5AG011700 Rh5BG014200 Rh5CG012700 Rh5DG012000
rosa_wichuraiana	Rw5G001110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	112
AasI	GACNNNNNNGTC	1 cut(s)	1607
Acc36I	ACCTGC	1 cut(s)	112
AciI	CCGC	4 cut(s)	298, 809, 881, 1202
AclI	AACGTT	1 cut(s)	1369
AclWI	GGATC	1 cut(s)	557
AcsI	RAATTY	4 cut(s)	403, 766, 956, 1268
AcuI	CTGAAG	3 cut(s)	132, 1283, 1311
AfaI	GTAC	3 cut(s)	225, 1521, 1563
AfiI	CCNNNNNNNGG	4 cut(s)	185, 298, 1076, 1541
AjiI	CACGTC	1 cut(s)	1609
AjnI	CCWGG	4 cut(s)	650, 679, 1239, 1534
AleI	CACNNNNGTG	1 cut(s)	1292
AluBI	AGCT	2 cut(s)	6, 832
AluI	AGCT	2 cut(s)	6, 832
Alw21I	GWGCWC	2 cut(s)	8, 940
Alw26I	GTCTC	5 cut(s)	704, 810, 1274, 1615, 1640
AlwI	GGATC	1 cut(s)	557
AlwNI	CAGNNNCTG	1 cut(s)	1121
AoxI	GGCC	1 cut(s)	173
ApeKI	GCWGC	6 cut(s)	97, 970, 982, 1017, 1121, 1669
ApoI	RAATTY	4 cut(s)	403, 766, 956, 1268
ArsI	GACNNNNNNTTYG	4 cut(s)	220, 252, 858, 890
Asp700I	GAANNNNTTC	2 cut(s)	1385, 1620
AspLEI	GCGC	2 cut(s)	209, 1491
AspS9I	GGNCC	5 cut(s)	61, 648, 1243, 1297, 1600
AsuC2I	CCSGG	1 cut(s)	129
AsuHPI	GGTGA	1 cut(s)	1550
AsuII	TTCGAA	2 cut(s)	928, 1004
AvaII	GGWCC	5 cut(s)	61, 648, 1243, 1297, 1600
BaeI	ACNNNNGTAYC	2 cut(s)	1331, 1364
BanII	GRGCYC	2 cut(s)	8, 696
BarI	GAAGNNNNNNTAC	4 cut(s)	105, 137, 1139, 1171
BauI	CACGAG	1 cut(s)	884
BbsI	GAAGAC	1 cut(s)	159
Bbv12I	GWGCWC	2 cut(s)	8, 940
BbvI	GCAGC	5 cut(s)	109, 957, 969, 1029, 1108
BccI	CCATC	6 cut(s)	539, 574, 656, 1213, 1268, 1520
BceAI	ACGGC	2 cut(s)	157, 329
BciT130I	CCWGG	4 cut(s)	652, 681, 1241, 1536
BcnI	CCSGG	1 cut(s)	129
BcoDI	GTCTC	5 cut(s)	704, 810, 1274, 1615, 1640
BfaI	CTAG	1 cut(s)	33
BfmI	CTRYAG	2 cut(s)	893, 1549
BfoI	RGCGCY	1 cut(s)	210
BfuAI	ACCTGC	1 cut(s)	112
BglII	AGATCT	1 cut(s)	991
BisI	GCNGC	6 cut(s)	98, 971, 983, 1018, 1122, 1670
BlsI	GCNGC	6 cut(s)	99, 972, 984, 1019, 1123, 1671
Bme1390I	CCNGG	5 cut(s)	129, 652, 681, 1241, 1536
Bme18I	GGWCC	5 cut(s)	61, 648, 1243, 1297, 1600
BmgBI	CACGTC	1 cut(s)	1609
BmgT120I	GGNCC	5 cut(s)	61, 648, 1243, 1297, 1600
BmiI	GGNNCC	3 cut(s)	667, 1245, 1546
BmrFI	CCNGG	5 cut(s)	129, 652, 681, 1241, 1536
BmrI	ACTGGG	1 cut(s)	944
BmsI	GCATC	4 cut(s)	331, 1029, 1164, 1584
BmuI	ACTGGG	1 cut(s)	944
BpiI	GAAGAC	1 cut(s)	159
BplI	GAGNNNNNCTC	2 cut(s)	739, 771
BpmI	CTGGAG	1 cut(s)	1070
Bpu14I	TTCGAA	2 cut(s)	928, 1004
BpuMI	CCSGG	1 cut(s)	129
Bsa29I	ATCGAT	1 cut(s)	820
BsaJI	CCNNGG	2 cut(s)	599, 1239
Bsc4I	CCNNNNNNNGG	4 cut(s)	185, 298, 1076, 1541
Bse1I	ACTGG	4 cut(s)	912, 950, 1053, 1675
Bse3DI	GCAATG	2 cut(s)	650, 1506
BseBI	CCWGG	4 cut(s)	652, 681, 1241, 1536
BseCI	ATCGAT	1 cut(s)	820
BseDI	CCNNGG	2 cut(s)	599, 1239
BseGI	GGATG	5 cut(s)	262, 580, 1323, 1362, 1452
BseLI	CCNNNNNNNGG	4 cut(s)	185, 298, 1076, 1541
BseMI	GCAATG	2 cut(s)	650, 1506
BseMII	CTCAG	3 cut(s)	600, 1358, 1635
BseNI	ACTGG	4 cut(s)	912, 950, 1053, 1675
BseRI	GAGGAG	1 cut(s)	747
BseXI	GCAGC	5 cut(s)	109, 957, 969, 1029, 1108
BshFI	GGCC	1 cut(s)	175
BshVI	ATCGAT	1 cut(s)	820
BsiHKAI	GWGCWC	2 cut(s)	8, 940
BsiSI	CCGG	2 cut(s)	128, 492
BslFI	GGGAC	3 cut(s)	379, 448, 1229
BslI	CCNNNNNNNGG	4 cut(s)	185, 298, 1076, 1541
BsmAI	GTCTC	5 cut(s)	704, 810, 1274, 1615, 1640
BsmBI	CGTCTC	1 cut(s)	1615
BsmFI	GGGAC	3 cut(s)	379, 448, 1229
BsmI	GAATGC	1 cut(s)	88
BsnI	GGCC	1 cut(s)	175
Bsp119I	TTCGAA	2 cut(s)	928, 1004
Bsp1286I	GDGCHC	3 cut(s)	8, 696, 940
Bsp1407I	TGTACA	3 cut(s)	223, 1519, 1561
Bsp143I	GATC	3 cut(s)	562, 991, 1501
BspACI	CCGC	4 cut(s)	298, 809, 881, 1202
BspANI	GGCC	1 cut(s)	175
BspCNI	CTCAG	3 cut(s)	601, 1357, 1636
BspDI	ATCGAT	1 cut(s)	820
BspLI	GGNNCC	3 cut(s)	667, 1245, 1546
BspMI	ACCTGC	1 cut(s)	112
BspPI	GGATC	1 cut(s)	557
BspT104I	TTCGAA	2 cut(s)	928, 1004
BsrDI	GCAATG	2 cut(s)	650, 1506
BsrGI	TGTACA	3 cut(s)	223, 1519, 1561
BsrI	ACTGG	4 cut(s)	912, 950, 1053, 1675
BssECI	CCNNGG	2 cut(s)	599, 1239
BssMI	GATC	3 cut(s)	562, 991, 1501
BssSI	CACGAG	1 cut(s)	884
BssT1I	CCWWGG	1 cut(s)	599
Bst2BI	CACGAG	1 cut(s)	884
Bst2UI	CCWGG	4 cut(s)	652, 681, 1241, 1536
Bst4CI	ACNGT	3 cut(s)	942, 1139, 1641
BstAPI	GCANNNNNTGC	1 cut(s)	94
BstAUI	TGTACA	3 cut(s)	223, 1519, 1561
BstBI	TTCGAA	2 cut(s)	928, 1004
BstC8I	GCNNGC	3 cut(s)	852, 881, 987
BstDEI	CTNAG	7 cut(s)	9, 609, 761, 783, 995, 1344, 1644
BstENI	CCTNNNNNAGG	2 cut(s)	1074, 1539
BstF5I	GGATG	5 cut(s)	262, 580, 1323, 1362, 1452
BstH2I	RGCGCY	1 cut(s)	210
BstHHI	GCGC	2 cut(s)	209, 1491
BstKTI	GATC	3 cut(s)	565, 994, 1504
BstMAI	GTCTC	5 cut(s)	704, 810, 1274, 1615, 1640
BstMBI	GATC	3 cut(s)	562, 991, 1501
BstMWI	GCNNNNNNNGC	3 cut(s)	94, 979, 1127
BstNI	CCWGG	4 cut(s)	652, 681, 1241, 1536
BstNSI	RCATGY	5 cut(s)	423, 590, 854, 989, 1657
BstSCI	CCNGG	5 cut(s)	127, 650, 679, 1239, 1534
BstSFI	CTRYAG	2 cut(s)	893, 1549
BstV1I	GCAGC	5 cut(s)	109, 957, 969, 1029, 1108
BstV2I	GAAGAC	1 cut(s)	159
BstX2I	RGATCY	1 cut(s)	991
BstYI	RGATCY	1 cut(s)	991
Bsu15I	ATCGAT	1 cut(s)	820
BsuRI	GGCC	1 cut(s)	175
BsuTUI	ATCGAT	1 cut(s)	820
BtgZI	GCGATG	1 cut(s)	159
BtrI	CACGTC	1 cut(s)	1609
BtsCI	GGATG	5 cut(s)	262, 580, 1323, 1362, 1452
BtsI	GCAGTG	1 cut(s)	796
BtsIMutI	CAGTG	4 cut(s)	108, 796, 1287, 1637
BveI	ACCTGC	1 cut(s)	112
Cac8I	GCNNGC	3 cut(s)	852, 881, 987
CaiI	CAGNNNCTG	1 cut(s)	1121
CfoI	GCGC	2 cut(s)	209, 1491
Cfr13I	GGNCC	5 cut(s)	61, 648, 1243, 1297, 1600
ClaI	ATCGAT	1 cut(s)	820
CpoI	CGGWCCG	1 cut(s)	61
CsiI	ACCWGGT	1 cut(s)	1534
Csp6I	GTAC	3 cut(s)	224, 1520, 1562
CspI	CGGWCCG	1 cut(s)	61
CviQI	GTAC	3 cut(s)	224, 1520, 1562
DdeI	CTNAG	7 cut(s)	9, 609, 761, 783, 995, 1344, 1644
DpnI	GATC	3 cut(s)	564, 993, 1503
DpnII	GATC	3 cut(s)	562, 991, 1501
DrdI	GACNNNNNNGTC	1 cut(s)	1607
DseDI	GACNNNNNNGTC	1 cut(s)	1607
Ecl136II	GAGCTC	1 cut(s)	6
Eco130I	CCWWGG	1 cut(s)	599
Eco24I	GRGCYC	2 cut(s)	8, 696
Eco47I	GGWCC	5 cut(s)	61, 648, 1243, 1297, 1600
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	3 cut(s)	132, 1283, 1311
EcoICRI	GAGCTC	1 cut(s)	6
EcoNI	CCTNNNNNAGG	2 cut(s)	1074, 1539
EcoO109I	RGGNCCY	2 cut(s)	1243, 1600
EcoRI	GAATTC	1 cut(s)	956
EcoRII	CCWGG	4 cut(s)	650, 679, 1239, 1534
EcoT14I	CCWWGG	1 cut(s)	599
EcoT22I	ATGCAT	2 cut(s)	421, 472
EcoT38I	GRGCYC	2 cut(s)	8, 696
ErhI	CCWWGG	1 cut(s)	599
Esp3I	CGTCTC	1 cut(s)	1615
FaqI	GGGAC	3 cut(s)	379, 448, 1229
FauI	CCCGC	2 cut(s)	291, 888
Fnu4HI	GCNGC	6 cut(s)	98, 971, 983, 1018, 1122, 1670
FokI	GGATG	5 cut(s)	269, 587, 1330, 1349, 1439
FriOI	GRGCYC	2 cut(s)	8, 696
Fsp4HI	GCNGC	6 cut(s)	98, 971, 983, 1018, 1122, 1670
FspBI	CTAG	1 cut(s)	33
GlaI	GCGC	2 cut(s)	208, 1490
GluI	GCNGC	6 cut(s)	98, 971, 983, 1018, 1122, 1670
GsuI	CTGGAG	1 cut(s)	1070
HaeII	RGCGCY	1 cut(s)	210
HaeIII	GGCC	1 cut(s)	175
HapII	CCGG	2 cut(s)	128, 492
HhaI	GCGC	2 cut(s)	209, 1491
Hin6I	GCGC	2 cut(s)	207, 1489
HinP1I	GCGC	2 cut(s)	207, 1489
HincII	GTYRAC	1 cut(s)	1464
HindII	GTYRAC	1 cut(s)	1464
HinfI	GANTC	6 cut(s)	56, 750, 1066, 1329, 1402, 1432
HpaII	CCGG	2 cut(s)	128, 492
HphI	GGTGA	1 cut(s)	1550
Hpy166II	GTNNAC	6 cut(s)	40, 224, 606, 1417, 1464, 1532
Hpy188I	TCNGA	9 cut(s)	61, 670, 946, 1263, 1301, 1407, 1576, 1615, 1645
Hpy188III	TCNNGA	7 cut(s)	319, 338, 542, 721, 1144, 1171, 1436
Hpy8I	GTNNAC	6 cut(s)	40, 224, 606, 1417, 1464, 1532
HpyCH4III	ACNGT	3 cut(s)	942, 1139, 1641
HpyCH4IV	ACGT	2 cut(s)	1369, 1608
HpyF10VI	GCNNNNNNNGC	3 cut(s)	94, 979, 1127
HpyF3I	CTNAG	7 cut(s)	9, 609, 761, 783, 995, 1344, 1644
HpySE526I	ACGT	2 cut(s)	1369, 1608
HspAI	GCGC	2 cut(s)	207, 1489
Kzo9I	GATC	3 cut(s)	562, 991, 1501
LmnI	GCTCC	3 cut(s)	622, 829, 935
Lsp1109I	GCAGC	5 cut(s)	109, 957, 969, 1029, 1108
LweI	GCATC	4 cut(s)	331, 1029, 1164, 1584
MabI	ACCWGGT	1 cut(s)	1534
MaeI	CTAG	1 cut(s)	33
MaeII	ACGT	2 cut(s)	1369, 1608
MaeIII	GTNAC	2 cut(s)	727, 751
MalI	GATC	3 cut(s)	564, 993, 1503
MboI	GATC	3 cut(s)	562, 991, 1501
MboII	GAAGA	8 cut(s)	164, 257, 506, 1018, 1276, 1411, 1441, 1589
MflI	RGATCY	1 cut(s)	991
MhlI	GDGCHC	3 cut(s)	8, 696, 940
MlyI	GAGTC	2 cut(s)	759, 1338
MmeI	TCCRAC	3 cut(s)	1324, 1390, 1430
Mph1103I	ATGCAT	2 cut(s)	421, 472
MroXI	GAANNNNTTC	2 cut(s)	1385, 1620
MseI	TTAA	4 cut(s)	135, 705, 743, 975
MslI	CAYNNNNRTG	1 cut(s)	1292
MspI	CCGG	2 cut(s)	128, 492
MspR9I	CCNGG	5 cut(s)	129, 652, 681, 1241, 1536
Mva1269I	GAATGC	1 cut(s)	88
MvaI	CCWGG	4 cut(s)	652, 681, 1241, 1536
MwoI	GCNNNNNNNGC	3 cut(s)	94, 979, 1127
NciI	CCSGG	1 cut(s)	129
NdeII	GATC	3 cut(s)	562, 991, 1501
NlaIV	GGNNCC	3 cut(s)	667, 1245, 1546
NmuCI	GTSAC	2 cut(s)	727, 751
NsiI	ATGCAT	2 cut(s)	421, 472
NspI	RCATGY	5 cut(s)	423, 590, 854, 989, 1657
NspV	TTCGAA	2 cut(s)	928, 1004
OliI	CACNNNNGTG	1 cut(s)	1292
PaeI	GCATGC	2 cut(s)	854, 989
PaqCI	CACCTGC	1 cut(s)	112
PcsI	WCGNNNNNNNCGW	1 cut(s)	1333
PctI	GAATGC	1 cut(s)	88
PdmI	GAANNNNTTC	2 cut(s)	1385, 1620
PfeI	GAWTC	4 cut(s)	56, 1066, 1402, 1432
PfoI	TCCNGGA	2 cut(s)	650, 679
PkrI	GCNGC	6 cut(s)	99, 972, 984, 1019, 1123, 1671
PleI	GAGTC	2 cut(s)	758, 1337
PpsI	GAGTC	2 cut(s)	758, 1337
PpuMI	RGGWCCY	2 cut(s)	1243, 1600
Psp124BI	GAGCTC	1 cut(s)	8
Psp1406I	AACGTT	1 cut(s)	1369
Psp5II	RGGWCCY	2 cut(s)	1243, 1600
Psp6I	CCWGG	4 cut(s)	650, 679, 1239, 1534
PspGI	CCWGG	4 cut(s)	650, 679, 1239, 1534
PspN4I	GGNNCC	3 cut(s)	667, 1245, 1546
PspPI	GGNCC	5 cut(s)	61, 648, 1243, 1297, 1600
PspPPI	RGGWCCY	2 cut(s)	1243, 1600
PstNI	CAGNNNCTG	1 cut(s)	1121
PsuI	RGATCY	1 cut(s)	991
RsaI	GTAC	3 cut(s)	225, 1521, 1563
RsaNI	GTAC	3 cut(s)	224, 1520, 1562
RseI	CAYNNNNRTG	1 cut(s)	1292
Rsr2I	CGGWCCG	1 cut(s)	61
RsrII	CGGWCCG	1 cut(s)	61
SacI	GAGCTC	1 cut(s)	8
SaqAI	TTAA	4 cut(s)	135, 705, 743, 975
SatI	GCNGC	6 cut(s)	98, 971, 983, 1018, 1122, 1670
Sau3AI	GATC	3 cut(s)	562, 991, 1501
Sau96I	GGNCC	5 cut(s)	61, 648, 1243, 1297, 1600
SchI	GAGTC	2 cut(s)	759, 1338
ScrFI	CCNGG	5 cut(s)	129, 652, 681, 1241, 1536
SduI	GDGCHC	3 cut(s)	8, 696, 940
SexAI	ACCWGGT	1 cut(s)	1534
SfaNI	GCATC	4 cut(s)	331, 1029, 1164, 1584
SfcI	CTRYAG	2 cut(s)	893, 1549
SfuI	TTCGAA	2 cut(s)	928, 1004
SinI	GGWCC	5 cut(s)	61, 648, 1243, 1297, 1600
SmiMI	CAYNNNNRTG	1 cut(s)	1292
SphI	GCATGC	2 cut(s)	854, 989
SsiI	CCGC	4 cut(s)	298, 809, 881, 1202
SspI	AATATT	1 cut(s)	440
SspMI	CTAG	1 cut(s)	33
SstI	GAGCTC	1 cut(s)	8
StyD4I	CCNGG	5 cut(s)	127, 650, 679, 1239, 1534
StyI	CCWWGG	1 cut(s)	599
TaaI	ACNGT	3 cut(s)	942, 1139, 1641
TaiI	ACGT	2 cut(s)	1372, 1611
TaqI	TCGA	6 cut(s)	312, 820, 928, 1004, 1327, 1437
TaqII	GACCGA	1 cut(s)	78
TatI	WGTACW	3 cut(s)	223, 1519, 1561
TfiI	GAWTC	4 cut(s)	56, 1066, 1402, 1432
Tru1I	TTAA	4 cut(s)	135, 705, 743, 975
Tru9I	TTAA	4 cut(s)	135, 705, 743, 975
TscAI	CASTG	4 cut(s)	115, 803, 1294, 1644
TseFI	GTSAC	2 cut(s)	727, 751
TseI	GCWGC	6 cut(s)	97, 970, 982, 1017, 1121, 1669
Tsp45I	GTSAC	2 cut(s)	727, 751
TspDTI	ATGAA	5 cut(s)	36, 567, 806, 920, 949
TspGWI	ACGGA	1 cut(s)	536
TspRI	CASTG	4 cut(s)	115, 803, 1294, 1644
VpaK11BI	GGWCC	5 cut(s)	61, 648, 1243, 1297, 1600
XagI	CCTNNNNNAGG	2 cut(s)	1074, 1539
XapI	RAATTY	4 cut(s)	403, 766, 956, 1268
XceI	RCATGY	5 cut(s)	423, 590, 854, 989, 1657
XmnI	GAANNNNTTC	2 cut(s)	1385, 1620
XspI	CTAG	1 cut(s)	33
Zsp2I	ATGCAT	2 cut(s)	421, 472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.