AT4G31870

Glutathione peroxidase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
15410078 .. 15412486
2409 bp
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UTR
Exon/CDS
Intron
AT4G31870.2

Sequence Viewer

Length: 702 bp
ATGGCTTTCTCTTACGCATCATTCTCTACACCCTTCAATGGTTTCGCTGCAAATCCGTCTCCGATTACTTCCGCTTTTCTCGGCCCATCATTGAGATTCTCCACCAGAACATCAAAAACTCGGAATCCGAGTAATGGGGTTTCAGTGAAATCGTCAAATAGTCATAGGTTTCTAGTCAAATCTAAAAATTTCAGTGTCTATGCAAGGGCTGCAGCAGAGAAGTCTGTTCACGATTTCACTGTAAAGGACATCGATGGTAATGATGTTTCTCTGGACAAATTCAAAGGAAAACCTTTGTTGATCGTTAACGTTGCGTCAAGATGTGGTTTGACATCATCAAATTACTCAGAGCTTTCTCAACTGTACGAAAAATACAAGAACCAAGGATTTGAGATTCTTGCTTTCCCTTGCAATCAATTTGGAGGTCAAGAACCCGGTTCAAACCCTGAGATCAAGCAATTTGCTTGCACCCGGTTCAAAGCAGAGTTCCCTATATTCGACAAGGTTGATGTGAATGGACCAAGCACAGCTCCAATCTACAAGTTCTTGAAATCCAATGCTGGTGGTTTCCTTGGTGATATCATCAAATGGAACTTTGAGAAATTCTTGGTTGATAAAAAGGGCAAAGTTGTCGAGAGATACCCTCCCACAACTTCTCCTTTCCAAATCGAGAAGGACATCCAGAAGTTGCTTGCGGCTTAA

Protein Analysis

233

Amino Acids

25.77

Weight (kDa)

9.53

Isoelectric Point (pI)

28.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Redoxin PF08534 72 - 133 2.9e-07 Redoxin
AhpC-TSA PF00578 75 - 133 8.3e-08 AhpC/TSA family
GSHPx PF00255 76 - 133 5.2e-17 Glutathione peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 72, 695
AclI AACGTT 1 cut(s) 309
AcsI RAATTY 3 cut(s) 187, 278, 602
AfaI GTAC 1 cut(s) 365
AfiI CCNNNNNNNGG 2 cut(s) 38, 134
AgsI TTSAA 5 cut(s) 37, 283, 441, 478, 550
AluBI AGCT 2 cut(s) 352, 530
AluI AGCT 2 cut(s) 352, 530
Alw26I GTCTC 1 cut(s) 63
AoxI GGCC 1 cut(s) 82
ApeKI GCWGC 3 cut(s) 47, 209, 212
ApoI RAATTY 3 cut(s) 187, 278, 602
AspS9I GGNCC 2 cut(s) 83, 518
AsuC2I CCSGG 2 cut(s) 435, 472
AsuHPI GGTGA 1 cut(s) 587
AvaII GGWCC 1 cut(s) 518
BbvI GCAGC 3 cut(s) 34, 196, 224
BccI CCATC 2 cut(s) 94, 248
BcgI CGANNNNNNTGC 2 cut(s) 613, 647
BcnI CCSGG 2 cut(s) 435, 472
BcoDI GTCTC 1 cut(s) 63
BfaI CTAG 1 cut(s) 173
BfmI CTRYAG 1 cut(s) 210
BisI GCNGC 4 cut(s) 48, 210, 213, 696
BlsI GCNGC 4 cut(s) 49, 211, 214, 697
Bme1390I CCNGG 2 cut(s) 435, 472
Bme18I GGWCC 1 cut(s) 518
BmgT120I GGNCC 2 cut(s) 83, 518
BmrFI CCNGG 2 cut(s) 435, 472
BmsI GCATC 1 cut(s) 26
BplI GAGNNNNNCTC 2 cut(s) 628, 660
BpuMI CCSGG 2 cut(s) 435, 472
Bsa29I ATCGAT 1 cut(s) 252
BsaJI CCNNGG 2 cut(s) 382, 571
BsaXI ACNNNNNCTCC 2 cut(s) 640, 670
Bsc4I CCNNNNNNNGG 2 cut(s) 38, 134
BseCI ATCGAT 1 cut(s) 252
BseDI CCNNGG 2 cut(s) 382, 571
BseGI GGATG 1 cut(s) 678
BseLI CCNNNNNNNGG 2 cut(s) 38, 134
BseMII CTCAG 2 cut(s) 360, 438
BseXI GCAGC 3 cut(s) 34, 196, 224
BshFI GGCC 1 cut(s) 84
BshVI ATCGAT 1 cut(s) 252
BsiSI CCGG 2 cut(s) 435, 472
BslI CCNNNNNNNGG 2 cut(s) 38, 134
BsmAI GTCTC 1 cut(s) 63
BsmBI CGTCTC 1 cut(s) 63
BsnI GGCC 1 cut(s) 84
Bsp143I GATC 2 cut(s) 300, 450
BspACI CCGC 2 cut(s) 72, 695
BspANI GGCC 1 cut(s) 84
BspCNI CTCAG 2 cut(s) 359, 439
BspDI ATCGAT 1 cut(s) 252
BspMAI CTGCAG 1 cut(s) 214
BssECI CCNNGG 2 cut(s) 382, 571
BssMI GATC 2 cut(s) 300, 450
BssT1I CCWWGG 2 cut(s) 382, 571
Bst4CI ACNGT 2 cut(s) 241, 363
BstAPI GCANNNNNTGC 1 cut(s) 209
BstC8I GCNNGC 2 cut(s) 466, 693
BstDEI CTNAG 2 cut(s) 346, 447
BstF5I GGATG 1 cut(s) 678
BstKTI GATC 2 cut(s) 303, 453
BstMAI GTCTC 1 cut(s) 63
BstMBI GATC 2 cut(s) 300, 450
BstMWI GCNNNNNNNGC 1 cut(s) 209
BstSCI CCNGG 2 cut(s) 433, 470
BstSFI CTRYAG 1 cut(s) 210
BstV1I GCAGC 3 cut(s) 34, 196, 224
Bsu15I ATCGAT 1 cut(s) 252
BsuRI GGCC 1 cut(s) 84
BsuTUI ATCGAT 1 cut(s) 252
BtsCI GGATG 1 cut(s) 678
BtsIMutI CAGTG 3 cut(s) 150, 199, 237
Cac8I GCNNGC 2 cut(s) 466, 693
Cfr13I GGNCC 2 cut(s) 83, 518
ClaI ATCGAT 1 cut(s) 252
CseI GACGC 1 cut(s) 303
Csp6I GTAC 1 cut(s) 364
CspCI CAANNNNNGTGG 2 cut(s) 544, 579
CviJI RGCY 6 cut(s) 5, 84, 209, 352, 530, 698
CviKI_1 RGCY 6 cut(s) 5, 84, 209, 352, 530, 698
CviQI GTAC 1 cut(s) 364
DdeI CTNAG 2 cut(s) 346, 447
DpnI GATC 2 cut(s) 302, 452
DpnII GATC 2 cut(s) 300, 450
Eco130I CCWWGG 2 cut(s) 382, 571
Eco32I GATATC 1 cut(s) 580
Eco47I GGWCC 1 cut(s) 518
EcoRV GATATC 1 cut(s) 580
EcoT14I CCWWGG 2 cut(s) 382, 571
ErhI CCWWGG 2 cut(s) 382, 571
Esp3I CGTCTC 1 cut(s) 63
FaiI YATR 3 cut(s) 165, 201, 494
Fnu4HI GCNGC 4 cut(s) 48, 210, 213, 696
FokI GGATG 1 cut(s) 665
Fsp4HI GCNGC 4 cut(s) 48, 210, 213, 696
FspBI CTAG 1 cut(s) 173
GluI GCNGC 4 cut(s) 48, 210, 213, 696
HaeIII GGCC 1 cut(s) 84
HapII CCGG 2 cut(s) 435, 472
HgaI GACGC 1 cut(s) 303
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 3 cut(s) 96, 124, 394
HpaI GTTAAC 1 cut(s) 307
HpaII CCGG 2 cut(s) 435, 472
HphI GGTGA 1 cut(s) 587
Hpy166II GTNNAC 2 cut(s) 229, 307
Hpy188I TCNGA 4 cut(s) 63, 123, 129, 349
Hpy188III TCNNGA 8 cut(s) 230, 272, 318, 428, 547, 634, 670, 682
Hpy8I GTNNAC 2 cut(s) 229, 307
HpyAV CCTTC 2 cut(s) 43, 667
HpyCH4III ACNGT 2 cut(s) 241, 363
HpyCH4IV ACGT 1 cut(s) 309
HpyCH4V TGCA 5 cut(s) 50, 203, 212, 411, 468
HpyF10VI GCNNNNNNNGC 1 cut(s) 209
HpyF3I CTNAG 2 cut(s) 346, 447
HpySE526I ACGT 1 cut(s) 309
KspAI GTTAAC 1 cut(s) 307
Kzo9I GATC 2 cut(s) 300, 450
LmnI GCTCC 1 cut(s) 535
LpnPI CCDG 7 cut(s) 118, 257, 448, 459, 485, 546, 695
Lsp1109I GCAGC 3 cut(s) 34, 196, 224
LweI GCATC 1 cut(s) 26
MaeI CTAG 1 cut(s) 173
MaeII ACGT 1 cut(s) 309
MalI GATC 2 cut(s) 302, 452
MboI GATC 2 cut(s) 300, 450
MluCI AATT 6 cut(s) 187, 278, 340, 416, 458, 602
MnlI CCTC 2 cut(s) 416, 654
MseI TTAA 2 cut(s) 306, 700
MspI CCGG 2 cut(s) 435, 472
MspR9I CCNGG 2 cut(s) 435, 472
MwoI GCNNNNNNNGC 1 cut(s) 209
NciI CCSGG 2 cut(s) 435, 472
NdeII GATC 2 cut(s) 300, 450
NmeAIII GCCGAG 1 cut(s) 60
PfeI GAWTC 3 cut(s) 96, 124, 394
PkrI GCNGC 4 cut(s) 49, 211, 214, 697
Psp1406I AACGTT 1 cut(s) 309
PspPI GGNCC 2 cut(s) 83, 518
PstI CTGCAG 1 cut(s) 214
RsaI GTAC 1 cut(s) 365
RsaNI GTAC 1 cut(s) 364
SaqAI TTAA 2 cut(s) 306, 700
SatI GCNGC 4 cut(s) 48, 210, 213, 696
Sau3AI GATC 2 cut(s) 300, 450
Sau96I GGNCC 2 cut(s) 83, 518
ScrFI CCNGG 2 cut(s) 435, 472
SetI ASST 7 cut(s) 170, 295, 312, 354, 427, 507, 532
SfaNI GCATC 1 cut(s) 26
SfcI CTRYAG 1 cut(s) 210
SinI GGWCC 1 cut(s) 518
Sse9I AATT 6 cut(s) 187, 278, 340, 416, 458, 602
SsiI CCGC 2 cut(s) 72, 695
SspMI CTAG 1 cut(s) 173
StyD4I CCNGG 2 cut(s) 433, 470
StyI CCWWGG 2 cut(s) 382, 571
TaaI ACNGT 2 cut(s) 241, 363
TaiI ACGT 1 cut(s) 312
TaqI TCGA 4 cut(s) 252, 498, 633, 669
TasI AATT 6 cut(s) 187, 278, 340, 416, 458, 602
TauI GCSGC 1 cut(s) 698
TfiI GAWTC 3 cut(s) 96, 124, 394
Tru1I TTAA 2 cut(s) 306, 700
Tru9I TTAA 2 cut(s) 306, 700
TscAI CASTG 3 cut(s) 150, 199, 244
TseI GCWGC 3 cut(s) 47, 209, 212
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 3 cut(s) 150, 199, 244
VpaK11BI GGWCC 1 cut(s) 518
XapI RAATTY 3 cut(s) 187, 278, 602
XspI CTAG 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.