AT4G32340
ERF Family

superfamily. Protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0010827
Physical Location & Seq
Reverse (-)
15612337 .. 15614544
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G32340.1

Sequence Viewer

Length: 717 bp
ATGATAATGAGAAGCGCGTCTTCACTGGACCTTAACCTACGCGCCGCCCAGAAACCGTCTGTTCCAAGGGTGGTAACCACGGCTCGAACCGTCTCTGCTGCTACTCCTCGTGTTGCTAAACCGATTACAAGAGCTTCTTCAGATGGAAACCTCTACAAGATTCAGTCGCCGGAGAGCATAACGAAAACCATCAGCGTATATCACGAAGAAACGGCGTCTTTGAGGGTTTTGGAAGGATCTCGACTCCCCCAAGGAGGTTCCAACGGTGGATTTGGTGGTAGAGGCGGAGATGGTGCCGGAGGTGGCGGTGGAGGTGGAGGTGGGAGCGTAGATGGTTATTACGAAGAGATGATCCAACGTTATCCCGGAGACACTCTCCTTCTCTCTAACTACGCTCGTTTCCTCAAAGAGGTGAAAGGAGATGGGAGAAAAGCGGAGGAGTACTGTGAGAGAGCGATGTTGTCTGAGAGTGGAAGAGATGGAGAGTTACTGTCTATGTATGGAGATTTGATATGGAAAAATCATGGAGACGGTGTTCGTGCTCAGTCTTACTATGATCAAGCTGTTCAATCTTCTCCTGATGACTGTAATGTTCTTGCGTCGTATGCTCGGTTTCTATGGGATGCTGAAGAAGAAGTGGAAGAGGAAGAGAGTAAACATCATGAGGATGGTTTCTCTGACTCTACCTATAACCCATCTGTATCAGTTGTGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

238

Amino Acids

25.62

Weight (kDa)

4.96

Isoelectric Point (pI)

50.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010827)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32340 AT5G20190
fragaria_vesca FvH4_1g03080 FvH4_1g03080 FvH4_1g03080
malus_domestica MD02G1030000.v1.1 MD15G1171400.v1.1
prunus_persica Prupe.7G244700_v2.0.a1
pyrus_communis pycom02g02500 pycom15g15300
rosa_chinensis RchiOBHm_Chr2g0088211
rosa_laevigata RLG00000015932
rosa_multiflora Rmu_sc0003275.1_g000071
rosa_roxburghii Rroxscaffold_2G00152830
rosa_rugosa Rorug01G0481800
rosa_samantha Rh2AG036900 Rh2BG036100 Rh2CG037200 Rh2DG036600
rosa_wichuraiana Rw2G002910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 293
AccII CGCG 2 cut(s) 17, 42
AciI CCGC 4 cut(s) 45, 285, 306, 434
AclI AACGTT 1 cut(s) 358
AclWI GGATC 2 cut(s) 244, 346
AcuI CTGAAG 2 cut(s) 123, 648
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 1 cut(s) 443
AfiI CCNNNNNNNGG 2 cut(s) 254, 409
AgsI TTSAA 1 cut(s) 569
AloI GAACNNNNNNTCC 2 cut(s) 519, 551
AluBI AGCT 2 cut(s) 134, 563
AluI AGCT 2 cut(s) 134, 563
Alw21I GWGCWC 1 cut(s) 544
Alw26I GTCTC 3 cut(s) 97, 363, 522
AlwI GGATC 2 cut(s) 244, 346
ApeKI GCWGC 1 cut(s) 98
AspLEI GCGC 2 cut(s) 17, 44
AspS9I GGNCC 1 cut(s) 28
AsuC2I CCSGG 1 cut(s) 366
AsuHPI GGTGA 1 cut(s) 424
AvaII GGWCC 1 cut(s) 28
BanI GGYRCC 1 cut(s) 293
BauI CACGAG 1 cut(s) 108
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 1 cut(s) 544
BbvI GCAGC 1 cut(s) 85
BccI CCATC 8 cut(s) 137, 197, 284, 326, 416, 473, 662, 703
BceAI ACGGC 2 cut(s) 96, 228
BclI TGATCA 1 cut(s) 556
BcnI CCSGG 1 cut(s) 366
BcoDI GTCTC 3 cut(s) 97, 363, 522
BisI GCNGC 2 cut(s) 45, 99
BlsI GCNGC 2 cut(s) 46, 100
BmcAI AGTACT 1 cut(s) 443
Bme1390I CCNGG 1 cut(s) 366
Bme18I GGWCC 1 cut(s) 28
BmgT120I GGNCC 1 cut(s) 28
BmiI GGNNCC 2 cut(s) 259, 295
BmrFI CCNGG 1 cut(s) 366
BmsI GCATC 1 cut(s) 613
BpiI GAAGAC 1 cut(s) 12
BplI GAGNNNNNCTC 2 cut(s) 360, 392
BpuMI CCSGG 1 cut(s) 366
BsaHI GRCGYC 1 cut(s) 215
BsaJI CCNNGG 3 cut(s) 65, 78, 250
BsaXI ACNNNNNCTCC 2 cut(s) 519, 549
Bsc4I CCNNNNNNNGG 2 cut(s) 254, 409
Bse1I ACTGG 1 cut(s) 30
BseDI CCNNGG 3 cut(s) 65, 78, 250
BseGI GGATG 2 cut(s) 628, 673
BseLI CCNNNNNNNGG 2 cut(s) 254, 409
BseMII CTCAG 2 cut(s) 456, 557
BseNI ACTGG 1 cut(s) 30
BseRI GAGGAG 2 cut(s) 96, 452
BseXI GCAGC 1 cut(s) 85
Bsh1236I CGCG 2 cut(s) 17, 42
BshNI GGYRCC 1 cut(s) 293
BsiHKAI GWGCWC 1 cut(s) 544
BsiSI CCGG 3 cut(s) 170, 297, 366
BslI CCNNNNNNNGG 2 cut(s) 254, 409
BsmAI GTCTC 3 cut(s) 97, 363, 522
BsmBI CGTCTC 2 cut(s) 97, 522
Bsp1286I GDGCHC 1 cut(s) 544
Bsp143I GATC 3 cut(s) 236, 351, 556
BspACI CCGC 4 cut(s) 45, 285, 306, 434
BspCNI CTCAG 2 cut(s) 457, 556
BspFNI CGCG 2 cut(s) 17, 42
BspHI TCATGA 1 cut(s) 661
BspLI GGNNCC 2 cut(s) 259, 295
BspPI GGATC 2 cut(s) 244, 346
BspT107I GGYRCC 1 cut(s) 293
BsrI ACTGG 1 cut(s) 30
BssECI CCNNGG 3 cut(s) 65, 78, 250
BssMI GATC 3 cut(s) 236, 351, 556
BssNI GRCGYC 1 cut(s) 215
BssSI CACGAG 1 cut(s) 108
BssT1I CCWWGG 2 cut(s) 65, 250
Bst2BI CACGAG 1 cut(s) 108
Bst4CI ACNGT 7 cut(s) 57, 91, 266, 446, 492, 533, 587
Bst6I CTCTTC 4 cut(s) 339, 469, 636, 642
BstACI GRCGYC 1 cut(s) 215
BstDEI CTNAG 2 cut(s) 465, 543
BstDSI CCRYGG 1 cut(s) 78
BstEII GGTNACC 1 cut(s) 73
BstENI CCTNNNNNAGG 1 cut(s) 407
BstF5I GGATG 2 cut(s) 628, 673
BstFNI CGCG 2 cut(s) 17, 42
BstHHI GCGC 2 cut(s) 17, 44
BstKTI GATC 3 cut(s) 239, 354, 559
BstMAI GTCTC 3 cut(s) 97, 363, 522
BstMBI GATC 3 cut(s) 236, 351, 556
BstMWI GCNNNNNNNGC 1 cut(s) 605
BstPI GGTNACC 1 cut(s) 73
BstSCI CCNGG 1 cut(s) 364
BstUI CGCG 2 cut(s) 17, 42
BstV1I GCAGC 1 cut(s) 85
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 236
BstYI RGATCY 1 cut(s) 236
BtgI CCRYGG 1 cut(s) 78
BtgZI GCGATG 1 cut(s) 470
BtsCI GGATG 2 cut(s) 628, 673
BtsIMutI CAGTG 1 cut(s) 23
CciI TCATGA 1 cut(s) 661
CfoI GCGC 2 cut(s) 17, 44
Cfr13I GGNCC 1 cut(s) 28
CseI GACGC 3 cut(s) 6, 204, 588
Csp6I GTAC 1 cut(s) 442
CviAII CATG 2 cut(s) 524, 662
CviJI RGCY 3 cut(s) 83, 134, 563
CviKI_1 RGCY 3 cut(s) 83, 134, 563
CviQI GTAC 1 cut(s) 442
DdeI CTNAG 2 cut(s) 465, 543
DpnI GATC 3 cut(s) 238, 353, 558
DpnII GATC 3 cut(s) 236, 351, 556
Eam1104I CTCTTC 4 cut(s) 339, 469, 636, 642
EarI CTCTTC 4 cut(s) 339, 469, 636, 642
EciI GGCGGA 1 cut(s) 300
Eco130I CCWWGG 2 cut(s) 65, 250
Eco47I GGWCC 1 cut(s) 28
Eco57I CTGAAG 2 cut(s) 123, 648
Eco91I GGTNACC 1 cut(s) 73
EcoNI CCTNNNNNAGG 1 cut(s) 407
EcoO65I GGTNACC 1 cut(s) 73
EcoT14I CCWWGG 2 cut(s) 65, 250
ErhI CCWWGG 2 cut(s) 65, 250
Esp3I CGTCTC 2 cut(s) 97, 522
FaeI CATG 2 cut(s) 527, 665
FalI AAGNNNNNCTT 3 cut(s) 36, 121, 153
FatI CATG 2 cut(s) 523, 661
FbaI TGATCA 1 cut(s) 556
Fnu4HI GCNGC 2 cut(s) 45, 99
FokI GGATG 2 cut(s) 635, 680
Fsp4HI GCNGC 2 cut(s) 45, 99
GlaI GCGC 2 cut(s) 16, 43
GluI GCNGC 2 cut(s) 45, 99
HapII CCGG 3 cut(s) 170, 297, 366
HgaI GACGC 3 cut(s) 6, 204, 588
HhaI GCGC 2 cut(s) 17, 44
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 2 cut(s) 527, 665
Hin6I GCGC 2 cut(s) 15, 42
HinP1I GCGC 2 cut(s) 15, 42
HinfI GANTC 3 cut(s) 160, 243, 680
HpaII CCGG 3 cut(s) 170, 297, 366
HphI GGTGA 1 cut(s) 424
Hpy166II GTNNAC 1 cut(s) 656
Hpy188I TCNGA 3 cut(s) 142, 466, 679
Hpy188III TCNNGA 5 cut(s) 203, 240, 578, 662, 714
Hpy8I GTNNAC 1 cut(s) 656
Hpy99I CGWCG 1 cut(s) 604
HpyAV CCTTC 2 cut(s) 227, 389
HpyCH4III ACNGT 7 cut(s) 57, 91, 266, 446, 492, 533, 587
HpyCH4IV ACGT 1 cut(s) 358
HpyF10VI GCNNNNNNNGC 1 cut(s) 605
HpyF3I CTNAG 2 cut(s) 465, 543
HpySE526I ACGT 1 cut(s) 358
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 2 cut(s) 527, 665
HspAI GCGC 2 cut(s) 15, 42
Ksp22I TGATCA 1 cut(s) 556
Kzo9I GATC 3 cut(s) 236, 351, 556
LmnI GCTCC 1 cut(s) 324
LpnPI CCDG 6 cut(s) 11, 62, 183, 310, 379, 591
Lsp1109I GCAGC 1 cut(s) 85
LweI GCATC 1 cut(s) 613
MaeII ACGT 1 cut(s) 358
MaeIII GTNAC 2 cut(s) 73, 486
MalI GATC 3 cut(s) 238, 353, 558
MboI GATC 3 cut(s) 236, 351, 556
MflI RGATCY 1 cut(s) 236
MhlI GDGCHC 1 cut(s) 544
MlyI GAGTC 2 cut(s) 237, 674
MmeI TCCRAC 2 cut(s) 285, 379
MseI TTAA 1 cut(s) 33
MslI CAYNNNNRTG 1 cut(s) 666
MspI CCGG 3 cut(s) 170, 297, 366
MspR9I CCNGG 1 cut(s) 366
MvnI CGCG 2 cut(s) 17, 42
MwoI GCNNNNNNNGC 1 cut(s) 605
NciI CCSGG 1 cut(s) 366
NdeII GATC 3 cut(s) 236, 351, 556
NlaIII CATG 2 cut(s) 527, 665
NlaIV GGNNCC 2 cut(s) 259, 295
PagI TCATGA 1 cut(s) 661
PfeI GAWTC 1 cut(s) 160
PfoI TCCNGGA 1 cut(s) 364
PkrI GCNGC 2 cut(s) 46, 100
PleI GAGTC 2 cut(s) 237, 674
PpsI GAGTC 2 cut(s) 237, 674
Psp1406I AACGTT 1 cut(s) 358
PspEI GGTNACC 1 cut(s) 73
PspN4I GGNNCC 2 cut(s) 259, 295
PspPI GGNCC 1 cut(s) 28
PsuI RGATCY 1 cut(s) 236
RsaI GTAC 1 cut(s) 443
RsaNI GTAC 1 cut(s) 442
RseI CAYNNNNRTG 1 cut(s) 666
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 2 cut(s) 45, 99
Sau3AI GATC 3 cut(s) 236, 351, 556
Sau96I GGNCC 1 cut(s) 28
ScaI AGTACT 1 cut(s) 443
SchI GAGTC 2 cut(s) 237, 674
ScrFI CCNGG 1 cut(s) 366
SduI GDGCHC 1 cut(s) 544
SfaNI GCATC 1 cut(s) 613
SinI GGWCC 1 cut(s) 28
SmiMI CAYNNNNRTG 1 cut(s) 666
SsiI CCGC 4 cut(s) 45, 285, 306, 434
StyD4I CCNGG 1 cut(s) 364
StyI CCWWGG 2 cut(s) 65, 250
TaaI ACNGT 7 cut(s) 57, 91, 266, 446, 492, 533, 587
TaiI ACGT 1 cut(s) 361
TaqI TCGA 2 cut(s) 85, 241
TatI WGTACW 1 cut(s) 441
TauI GCSGC 1 cut(s) 47
TfiI GAWTC 1 cut(s) 160
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 1 cut(s) 30
TseI GCWGC 1 cut(s) 98
TspRI CASTG 1 cut(s) 30
VpaK11BI GGWCC 1 cut(s) 28
XagI CCTNNNNNAGG 1 cut(s) 407
ZrmI AGTACT 1 cut(s) 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.