Prupe.7G244700_v2.0.a1
ERF Family

superfamily. Protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0010827
Physical Location & Seq
Forward (+)
20898120 .. 20900110
1991 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G244700.1

Sequence Viewer

Length: 936 bp
ATGCTTCTAAGGAGCTCATCAACGCCCGTACTAAATTCATGGCTACCCCACTCCAAAGACTCATCATTTCCAGAACAACAACCCGAAATGGTACCCCAAATCGCCAAAACTCGTTCCCTTGCCCTCTCGGCCTCGTCGCGGTCTCCTCTTACATTGTCGCCGATCAACGACTCGGCTAGGAAGATGACTCGGGCGGTCTCTGAGGCCGATCTTAGAGATCTCTCGCTGACGCCCAAAAGAAAGCCATTCAAAATGCCCTTGAATGGGTTCGAGGAGAGAGAGGAGGATGAGGAGATGGAAATGGCTTTTTCTTCCGAGTTTAGGAGAACGGTGTCGTTTGTGGAAGGGTGTGAGATCGGGTTGAGTGAGAACAAGGGCTTGTTGGACGTTTTGGTTGAGGGTGGGGTTGGTGGAGGCGGTGGCAAGATATGCGGTGGTAATGGCGGAGGGGGTGGTGGATCGGACGGTGGAGATGATGGGAGCTCAGGATTTTGGGATTCGAATAATAATGGGAGTGGTAACACTGAGATCTATTATCAGAAAATGATCGACGCTTATCCTGGAAATCCCATGATTCTCAGCAATTATGCTCGTTTTTTAAAAGAGGTTCGTGGGGATTTTGAAAAGGCTGAAGAGTACTGTGGGAGAGCCATTTTGGCGAACCCAAATGATGGAAATGTCCTATCAATGTTTGCGGATTTGGTATGGCAGAATCACAAGGATGCTCCTAGAGCTCAGACTTACTTTGATCAAGCCGTTCAAGCGGCCCCTGATGATAGTTTTGTTCTAGCATCCTATGCTAAGTTTCTTTGGGATTCTGAGGAAGATGAGGAGGAGGAGGAGGATTTGAAAGAAGGCGCCAACAACAGAGCATCGACACCCAATTTGTTGCAAGGAGTTCCTCCTTCACCCCCCCCATTAGCTGCTGCTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_17

Protein Analysis

312

Amino Acids

33.66

Weight (kDa)

4.53

Isoelectric Point (pI)

66.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010827)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32340 AT5G20190
fragaria_vesca FvH4_1g03080 FvH4_1g03080 FvH4_1g03080
malus_domestica MD02G1030000.v1.1 MD15G1171400.v1.1
prunus_persica Prupe.7G244700_v2.0.a1
pyrus_communis pycom02g02500 pycom15g15300
rosa_chinensis RchiOBHm_Chr2g0088211
rosa_laevigata RLG00000015932
rosa_multiflora Rmu_sc0003275.1_g000071
rosa_roxburghii Rroxscaffold_2G00152830
rosa_rugosa Rorug01G0481800
rosa_samantha Rh2AG036900 Rh2BG036100 Rh2CG037200 Rh2DG036600
rosa_wichuraiana Rw2G002910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 91
AccB1I GGYRCC 2 cut(s) 91, 857
AccB7I CCANNNNNTGG 1 cut(s) 671
AccII CGCG 1 cut(s) 139
AciI CCGC 7 cut(s) 139, 194, 417, 432, 444, 695, 764
AclWI GGATC 1 cut(s) 466
AcsI RAATTY 1 cut(s) 34
AcuI CTGAAG 1 cut(s) 651
AcyI GRCGYC 2 cut(s) 230, 858
AfaI GTAC 3 cut(s) 30, 93, 638
AfiI CCNNNNNNNGG 5 cut(s) 138, 263, 264, 321, 671
AgsI TTSAA 5 cut(s) 250, 262, 623, 761, 850
AjnI CCWGG 1 cut(s) 559
AluBI AGCT 4 cut(s) 15, 483, 734, 923
AluI AGCT 4 cut(s) 15, 483, 734, 923
Alw21I GWGCWC 3 cut(s) 17, 485, 736
Alw26I GTCTC 2 cut(s) 147, 202
AlwI GGATC 1 cut(s) 466
Ama87I CYCGRG 1 cut(s) 189
AoxI GGCC 3 cut(s) 129, 204, 765
ApeKI GCWGC 3 cut(s) 923, 926, 929
ApoI RAATTY 1 cut(s) 34
ArsI GACNNNNNNTTYG 2 cut(s) 868, 900
Asp700I GAANNNNTTC 1 cut(s) 266
Asp718I GGTACC 1 cut(s) 91
AspLEI GCGC 1 cut(s) 860
AspS9I GGNCC 1 cut(s) 766
AsuHPI GGTGA 1 cut(s) 900
AsuII TTCGAA 1 cut(s) 500
AvaI CYCGRG 1 cut(s) 189
BanI GGYRCC 2 cut(s) 91, 857
BanII GRGCYC 3 cut(s) 17, 485, 736
Bbv12I GWGCWC 3 cut(s) 17, 485, 736
BbvI GCAGC 3 cut(s) 910, 913, 916
BccI CCATC 3 cut(s) 289, 470, 665
BceAI ACGGC 1 cut(s) 740
BciT130I CCWGG 1 cut(s) 561
BclI TGATCA 1 cut(s) 748
BcoDI GTCTC 2 cut(s) 147, 202
BfaI CTAG 3 cut(s) 177, 729, 788
BfoI RGCGCY 1 cut(s) 861
BglI GCCNNNNNGGC 2 cut(s) 128, 656
BglII AGATCT 2 cut(s) 217, 528
BisI GCNGC 4 cut(s) 765, 924, 927, 930
BlsI GCNGC 4 cut(s) 766, 925, 928, 931
BmcAI AGTACT 1 cut(s) 638
Bme1390I CCNGG 1 cut(s) 561
BmeT110I CYCGRG 1 cut(s) 189
BmgT120I GGNCC 1 cut(s) 766
BmiI GGNNCC 3 cut(s) 93, 768, 859
BmrFI CCNGG 1 cut(s) 561
BmsI GCATC 3 cut(s) 712, 800, 881
Bpu10I CCTNAGC 1 cut(s) 484
Bpu14I TTCGAA 1 cut(s) 500
BsaHI GRCGYC 2 cut(s) 230, 858
BsaI GGTCTC 2 cut(s) 147, 202
Bsc4I CCNNNNNNNGG 5 cut(s) 138, 263, 264, 321, 671
BseBI CCWGG 1 cut(s) 561
BseGI GGATG 3 cut(s) 292, 727, 791
BseLI CCNNNNNNNGG 5 cut(s) 138, 263, 264, 321, 671
BseMII CTCAG 6 cut(s) 192, 498, 516, 592, 749, 810
BseRI GAGGAG 8 cut(s) 135, 287, 296, 305, 845, 848, 851, 854
BseXI GCAGC 3 cut(s) 910, 913, 916
Bsh1236I CGCG 1 cut(s) 139
BshFI GGCC 3 cut(s) 131, 206, 767
BshNI GGYRCC 2 cut(s) 91, 857
BsiHKAI GWGCWC 3 cut(s) 17, 485, 736
BsiHKCI CYCGRG 1 cut(s) 189
BslI CCNNNNNNNGG 5 cut(s) 138, 263, 264, 321, 671
BsmAI GTCTC 2 cut(s) 147, 202
BsnI GGCC 3 cut(s) 131, 206, 767
Bso31I GGTCTC 2 cut(s) 147, 202
BsoBI CYCGRG 1 cut(s) 189
Bsp119I TTCGAA 1 cut(s) 500
Bsp1286I GDGCHC 3 cut(s) 17, 485, 736
Bsp143I GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
BspACI CCGC 7 cut(s) 139, 194, 417, 432, 444, 695, 764
BspANI GGCC 3 cut(s) 131, 206, 767
BspCNI CTCAG 6 cut(s) 193, 497, 517, 591, 748, 811
BspFNI CGCG 1 cut(s) 139
BspLI GGNNCC 3 cut(s) 93, 768, 859
BspPI GGATC 1 cut(s) 466
BspT104I TTCGAA 1 cut(s) 500
BspT107I GGYRCC 2 cut(s) 91, 857
BspTNI GGTCTC 2 cut(s) 147, 202
BssMI GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
BssNI GRCGYC 2 cut(s) 230, 858
Bst2UI CCWGG 1 cut(s) 561
Bst4CI ACNGT 3 cut(s) 331, 467, 641
Bst6I CTCTTC 1 cut(s) 627
BstACI GRCGYC 2 cut(s) 230, 858
BstAPI GCANNNNNTGC 2 cut(s) 429, 797
BstBI TTCGAA 1 cut(s) 500
BstDEI CTNAG 9 cut(s) 8, 201, 212, 484, 525, 578, 735, 801, 819
BstF5I GGATG 3 cut(s) 292, 727, 791
BstFNI CGCG 1 cut(s) 139
BstH2I RGCGCY 1 cut(s) 861
BstHHI GCGC 1 cut(s) 860
BstKTI GATC 8 cut(s) 165, 211, 220, 357, 461, 531, 549, 751
BstMAI GTCTC 2 cut(s) 147, 202
BstMBI GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
BstMWI GCNNNNNNNGC 7 cut(s) 128, 429, 656, 731, 761, 797, 929
BstNI CCWGG 1 cut(s) 561
BstSCI CCNGG 1 cut(s) 559
BstUI CGCG 1 cut(s) 139
BstV1I GCAGC 3 cut(s) 910, 913, 916
BstX2I RGATCY 2 cut(s) 217, 528
BstYI RGATCY 2 cut(s) 217, 528
BsuRI GGCC 3 cut(s) 131, 206, 767
BtsCI GGATG 3 cut(s) 292, 727, 791
BtsIMutI CAGTG 1 cut(s) 522
CfoI GCGC 1 cut(s) 860
Cfr13I GGNCC 1 cut(s) 766
CseI GACGC 2 cut(s) 238, 560
Csp6I GTAC 3 cut(s) 29, 92, 637
CviAII CATG 2 cut(s) 39, 571
CviQI GTAC 3 cut(s) 29, 92, 637
DdeI CTNAG 9 cut(s) 8, 201, 212, 484, 525, 578, 735, 801, 819
DinI GGCGCC 1 cut(s) 859
DpnI GATC 8 cut(s) 164, 210, 219, 356, 460, 530, 548, 750
DpnII GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
DraI TTTAAA 1 cut(s) 600
Eam1104I CTCTTC 1 cut(s) 627
EarI CTCTTC 1 cut(s) 627
EciI GGCGGA 1 cut(s) 459
Ecl136II GAGCTC 3 cut(s) 15, 483, 734
Eco24I GRGCYC 3 cut(s) 17, 485, 736
Eco31I GGTCTC 2 cut(s) 147, 202
Eco53kI GAGCTC 3 cut(s) 15, 483, 734
Eco57I CTGAAG 1 cut(s) 651
Eco88I CYCGRG 1 cut(s) 189
EcoICRI GAGCTC 3 cut(s) 15, 483, 734
EcoRII CCWGG 1 cut(s) 559
EcoT38I GRGCYC 3 cut(s) 17, 485, 736
EgeI GGCGCC 1 cut(s) 859
EheI GGCGCC 1 cut(s) 859
FaeI CATG 2 cut(s) 42, 574
FaiI YATR 7 cut(s) 40, 430, 572, 588, 706, 798, 934
FatI CATG 2 cut(s) 38, 570
FbaI TGATCA 1 cut(s) 748
Fnu4HI GCNGC 4 cut(s) 765, 924, 927, 930
FokI GGATG 3 cut(s) 299, 734, 778
FriOI GRGCYC 3 cut(s) 17, 485, 736
Fsp4HI GCNGC 4 cut(s) 765, 924, 927, 930
FspBI CTAG 3 cut(s) 177, 729, 788
GlaI GCGC 1 cut(s) 859
GluI GCNGC 4 cut(s) 765, 924, 927, 930
HaeII RGCGCY 1 cut(s) 861
HaeIII GGCC 3 cut(s) 131, 206, 767
HgaI GACGC 2 cut(s) 238, 560
HhaI GCGC 1 cut(s) 860
Hin1I GRCGYC 2 cut(s) 230, 858
Hin1II CATG 2 cut(s) 42, 574
Hin6I GCGC 1 cut(s) 858
HinP1I GCGC 1 cut(s) 858
HinfI GANTC 7 cut(s) 59, 170, 187, 497, 574, 712, 815
HphI GGTGA 1 cut(s) 900
Hpy188I TCNGA 6 cut(s) 202, 316, 463, 540, 738, 820
Hpy188III TCNNGA 2 cut(s) 71, 486
Hpy99I CGWCG 2 cut(s) 139, 554
HpyAV CCTTC 3 cut(s) 338, 848, 915
HpyCH4III ACNGT 3 cut(s) 331, 467, 641
HpyCH4IV ACGT 1 cut(s) 387
HpyCH4V TGCA 2 cut(s) 892, 932
HpyF10VI GCNNNNNNNGC 7 cut(s) 128, 429, 656, 731, 761, 797, 929
HpyF3I CTNAG 9 cut(s) 8, 201, 212, 484, 525, 578, 735, 801, 819
HpySE526I ACGT 1 cut(s) 387
Hsp92I GRCGYC 2 cut(s) 230, 858
Hsp92II CATG 2 cut(s) 42, 574
HspAI GCGC 1 cut(s) 858
KasI GGCGCC 1 cut(s) 857
KpnI GGTACC 1 cut(s) 95
Ksp22I TGATCA 1 cut(s) 748
Kzo9I GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
LmnI GCTCC 3 cut(s) 12, 480, 730
LpnPI CCDG 5 cut(s) 84, 471, 546, 573, 783
Lsp1109I GCAGC 3 cut(s) 910, 913, 916
LweI GCATC 3 cut(s) 712, 800, 881
MaeI CTAG 3 cut(s) 177, 729, 788
MaeII ACGT 1 cut(s) 387
MaeIII GTNAC 1 cut(s) 518
MalI GATC 8 cut(s) 164, 210, 219, 356, 460, 530, 548, 750
MboI GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
MboII GAAGA 4 cut(s) 193, 303, 644, 836
MflI RGATCY 2 cut(s) 217, 528
MhlI GDGCHC 3 cut(s) 17, 485, 736
MluCI AATT 3 cut(s) 34, 583, 883
Mly113I GGCGCC 1 cut(s) 858
MlyI GAGTC 3 cut(s) 53, 164, 181
MmeI TCCRAC 1 cut(s) 363
MroXI GAANNNNTTC 1 cut(s) 266
MseI TTAA 1 cut(s) 599
MslI CAYNNNNRTG 1 cut(s) 720
MspR9I CCNGG 1 cut(s) 561
MvaI CCWGG 1 cut(s) 561
MvnI CGCG 1 cut(s) 139
MwoI GCNNNNNNNGC 7 cut(s) 128, 429, 656, 731, 761, 797, 929
NarI GGCGCC 1 cut(s) 858
NdeII GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
NlaIII CATG 2 cut(s) 42, 574
NlaIV GGNNCC 3 cut(s) 93, 768, 859
NmeAIII GCCGAG 2 cut(s) 107, 152
NspV TTCGAA 1 cut(s) 500
PdmI GAANNNNTTC 1 cut(s) 266
PfeI GAWTC 4 cut(s) 497, 574, 712, 815
PflMI CCANNNNNTGG 1 cut(s) 671
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 4 cut(s) 766, 925, 928, 931
PleI GAGTC 3 cut(s) 53, 164, 181
PluTI GGCGCC 1 cut(s) 861
PpsI GAGTC 3 cut(s) 53, 164, 181
Psp124BI GAGCTC 3 cut(s) 17, 485, 736
Psp6I CCWGG 1 cut(s) 559
PspGI CCWGG 1 cut(s) 559
PspN4I GGNNCC 3 cut(s) 93, 768, 859
PspPI GGNCC 1 cut(s) 766
PsuI RGATCY 2 cut(s) 217, 528
RsaI GTAC 3 cut(s) 30, 93, 638
RsaNI GTAC 3 cut(s) 29, 92, 637
RseI CAYNNNNRTG 1 cut(s) 720
SacI GAGCTC 3 cut(s) 17, 485, 736
SaqAI TTAA 1 cut(s) 599
SatI GCNGC 4 cut(s) 765, 924, 927, 930
Sau3AI GATC 8 cut(s) 162, 208, 217, 354, 458, 528, 546, 748
Sau96I GGNCC 1 cut(s) 766
ScaI AGTACT 1 cut(s) 638
SchI GAGTC 3 cut(s) 53, 164, 181
ScrFI CCNGG 1 cut(s) 561
SduI GDGCHC 3 cut(s) 17, 485, 736
SetI ASST 6 cut(s) 17, 390, 485, 609, 736, 925
SfaNI GCATC 3 cut(s) 712, 800, 881
SfoI GGCGCC 1 cut(s) 859
SfuI TTCGAA 1 cut(s) 500
SmiMI CAYNNNNRTG 1 cut(s) 720
Sse9I AATT 3 cut(s) 34, 583, 883
SsiI CCGC 7 cut(s) 139, 194, 417, 432, 444, 695, 764
SspDI GGCGCC 1 cut(s) 857
SspMI CTAG 3 cut(s) 177, 729, 788
SstI GAGCTC 3 cut(s) 17, 485, 736
StyD4I CCNGG 1 cut(s) 559
TaaI ACNGT 3 cut(s) 331, 467, 641
TaiI ACGT 1 cut(s) 390
TaqI TCGA 4 cut(s) 270, 500, 549, 875
TasI AATT 3 cut(s) 34, 583, 883
TatI WGTACW 1 cut(s) 636
TauI GCSGC 1 cut(s) 767
TfiI GAWTC 4 cut(s) 497, 574, 712, 815
Tru1I TTAA 1 cut(s) 599
Tru9I TTAA 1 cut(s) 599
TscAI CASTG 1 cut(s) 529
TseI GCWGC 3 cut(s) 923, 926, 929
TspDTI ATGAA 1 cut(s) 27
TspRI CASTG 1 cut(s) 529
Van91I CCANNNNNTGG 1 cut(s) 671
XapI RAATTY 1 cut(s) 34
XmnI GAANNNNTTC 1 cut(s) 266
XspI CTAG 3 cut(s) 177, 729, 788
ZrmI AGTACT 1 cut(s) 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.