Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010979

Physical Location & Seq

Genomic Coordinates Reverse (-)

16942031 .. 16944677

Gene Structure 2647 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G35760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGATGGCGAGGTTTGTTTCTGTGTCGTCTTGTCAGTTTCATTTCGGCTTCCGTGAGGTTTCTCCTCCGTCGGTAACTTCTTATCCTAGACGATTCGAGGTCTCTGATCGGAGATTTCCTGCGATTCCGATTAAATGTTCTTCATCTGAGCCGGAAAACGGTGAGGATTCGGCACCGTCGCTGTCTTCCTCCTCCTCATCGTCTACAAGTGAAGTATCTACTAGTAACAGTTCGACATACAACTGGTACACCGGAATCGGCGGTATTGGGATGTTAGACACTGCGTATTTGACTTACCTCAAGGTCACTGGCTCCGATGCGTTTTGCCCTATTGGTGGTGGCACTTGCGGTGATGTCCTCAACAGCGATTATGCCGTCGTTTTCGGTGTTCCTCTTCCAGTGATTGGATTTGTTATGTATGGCGTAGTAACCGCTCTAAGTGCAGAGCTTGGGGAAGGGAATCTACCTTTTGGAATCAGTAAGAGCAATGGGCGTTTCGCGTTATTTGGGATCACGACTGCAATGGCATCTGCTAGTGCATATTTCCTGTATATCCTTAGCACAAAACTCTCAGGATCATCATGCCTGTATTGTCTGGTGTCTGCTTTCTTATCATTTAGTCTATTTTTCCTCTCTGTAAAGGATGTGAAGTTGCAAGAAATACAGCAAGTTGTAGGATTGCAGATATGCTTAGCAATCATAGTAGTTGCCTCCTTGACTGCTTCTTACAGTACTGCTCAACCAATCCCTTCACGCTCTGGTGACATTGAACTGCCATATTTTAGAACAGAGATCAGTTCATCATCGAGCCCTTATGCTATTGCTTTAGCAAAACATCTAAACTCCATTGGAGCTAAAATGTATGGGGCATTCTGGTGTTCTCACTGCTTAGAGCAAAAAGAGATGTTTGGAAGAGAAGCGGCAAAAGAACTGAACTACGTGGAATGTTTTCCGGATGGATATAAGAAAGGAACTAAGATACTCAAGGCATGTGCAGATGCTGCGATCGAAGGATTCCCAACATGGATAATAAATGATAAGGTCTTAAGCGGAGAAATAGAACTCGCTGAACTAGCGGAGATGACTGGATTCAGCCTTGATCAGGCAAATGAGACCAATCAACTTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003955 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0010207 GO:0015979 GO:0016043 GO:0016491 GO:0016651 GO:0016655 GO:0019684 GO:0022607 GO:0034622 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VKOR

Protein Analysis

376

Amino Acids

40.4

Weight (kDa)

4.98

Isoelectric Point (pI)

46.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VKOR	PF07884	82 - 212	1.2e-26	Vitamin K epoxide reductase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010979)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35760 AT4G35760
fragaria_vesca	FvH4_1g10920 FvH4_1g10920
malus_domestica	MD02G1122300.v1.1 MD15G1236200.v1.1
prunus_persica	Prupe.7G176300_v2.0.a1
pyrus_communis	pycom02g09520 pycom15g21020
rosa_chinensis	RchiOBHm_Chr2g0098181
rosa_laevigata	RLG00000016769
rosa_multiflora	Rmu_sc0009178.1_g000009 Rmu_sc0023861.1_g000003
rosa_roxburghii	Rroxscaffold_2G00144220
rosa_rugosa	Rorug02G0070800
rosa_samantha	Rh2AG118100 Rh2BG121100 Rh2CG122700 Rh2DG122600
rosa_wichuraiana	Rw2G009240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	172
AccB7I	CCANNNNNTGG	1 cut(s)	404
AccBSI	CCGCTC	1 cut(s)	434
AccI	GTMKAC	1 cut(s)	203
AccII	CGCG	1 cut(s)	500
AccIII	TCCGGA	1 cut(s)	952
AciI	CCGC	6 cut(s)	261, 348, 432, 920, 1050, 1076
AclWI	GGATC	2 cut(s)	518, 583
AcuI	CTGAAG	1 cut(s)	1109
AfaI	GTAC	2 cut(s)	248, 733
AfiI	CCNNNNNNNGG	4 cut(s)	158, 335, 404, 1102
AflII	CTTAAG	1 cut(s)	1045
AgsI	TTSAA	1 cut(s)	770
AhlI	ACTAGT	1 cut(s)	221
AluBI	AGCT	2 cut(s)	448, 854
AluI	AGCT	2 cut(s)	448, 854
Alw26I	GTCTC	2 cut(s)	106, 1106
AlwI	GGATC	2 cut(s)	518, 583
AlwNI	CAGNNNCTG	1 cut(s)	1001
Aor13HI	TCCGGA	1 cut(s)	952
ApeKI	GCWGC	1 cut(s)	1001
Asp700I	GAANNNNTTC	1 cut(s)	948
AsuHPI	GGTGA	3 cut(s)	173, 362, 773
BanI	GGYRCC	1 cut(s)	172
BanII	GRGCYC	1 cut(s)	812
BarI	GAAGNNNNNNTAC	2 cut(s)	447, 479
BbsI	GAAGAC	1 cut(s)	177
BbvI	GCAGC	1 cut(s)	988
BccI	CCATC	1 cut(s)	950
BceAI	ACGGC	1 cut(s)	359
BclI	TGATCA	1 cut(s)	1099
BcoDI	GTCTC	2 cut(s)	106, 1106
BcuI	ACTAGT	1 cut(s)	221
BfaI	CTAG	4 cut(s)	87, 222, 534, 1073
BfrI	CTTAAG	1 cut(s)	1045
BisI	GCNGC	2 cut(s)	921, 1002
BlpI	GCTNAGC	1 cut(s)	691
BlsI	GCNGC	2 cut(s)	922, 1003
BmcAI	AGTACT	1 cut(s)	733
BmiI	GGNNCC	2 cut(s)	174, 313
BmsI	GCATC	3 cut(s)	307, 536, 988
BpiI	GAAGAC	1 cut(s)	177
Bpu10I	CCTNAGC	1 cut(s)	557
Bpu1102I	GCTNAGC	1 cut(s)	691
BpuEI	CTTGAG	2 cut(s)	284, 968
BsaAI	YACGTR	1 cut(s)	940
BsaI	GGTCTC	2 cut(s)	106, 1106
BsaWI	WCCGGW	2 cut(s)	251, 952
Bsc4I	CCNNNNNNNGG	4 cut(s)	158, 335, 404, 1102
Bse1I	ACTGG	4 cut(s)	248, 313, 398, 1090
Bse3DI	GCAATG	2 cut(s)	493, 528
BseAI	TCCGGA	1 cut(s)	952
BseGI	GGATG	3 cut(s)	276, 649, 961
BseLI	CCNNNNNNNGG	4 cut(s)	158, 335, 404, 1102
BseMI	GCAATG	2 cut(s)	493, 528
BseMII	CTCAG	2 cut(s)	138, 585
BseNI	ACTGG	4 cut(s)	248, 313, 398, 1090
BseRI	GAGGAG	3 cut(s)	54, 181, 184
BseXI	GCAGC	1 cut(s)	988
BsgI	GTGCAG	2 cut(s)	462, 1014
Bsh1236I	CGCG	1 cut(s)	500
Bsh1285I	CGRYCG	1 cut(s)	1008
BshNI	GGYRCC	1 cut(s)	172
BsiEI	CGRYCG	1 cut(s)	1008
BsiSI	CCGG	3 cut(s)	152, 252, 953
BslI	CCNNNNNNNGG	4 cut(s)	158, 335, 404, 1102
BsmAI	GTCTC	2 cut(s)	106, 1106
BsmI	GAATGC	1 cut(s)	869
Bso31I	GGTCTC	2 cut(s)	106, 1106
Bsp1286I	GDGCHC	1 cut(s)	812
Bsp13I	TCCGGA	1 cut(s)	952
Bsp143I	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
Bsp1720I	GCTNAGC	1 cut(s)	691
BspACI	CCGC	6 cut(s)	261, 348, 432, 920, 1050, 1076
BspCNI	CTCAG	2 cut(s)	139, 584
BspEI	TCCGGA	1 cut(s)	952
BspFNI	CGCG	1 cut(s)	500
BspLI	GGNNCC	2 cut(s)	174, 313
BspPI	GGATC	2 cut(s)	518, 583
BspT107I	GGYRCC	1 cut(s)	172
BspTI	CTTAAG	1 cut(s)	1045
BspTNI	GGTCTC	2 cut(s)	106, 1106
BsrBI	CCGCTC	1 cut(s)	434
BsrDI	GCAATG	2 cut(s)	493, 528
BsrI	ACTGG	4 cut(s)	248, 313, 398, 1090
BssMI	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
Bst4CI	ACNGT	4 cut(s)	161, 177, 230, 731
Bst6I	CTCTTC	2 cut(s)	399, 907
BstAFI	CTTAAG	1 cut(s)	1045
BstAPI	GCANNNNNTGC	1 cut(s)	1001
BstBAI	YACGTR	1 cut(s)	940
BstDEI	CTNAG	7 cut(s)	147, 437, 557, 571, 691, 889, 975
BstENI	CCTNNNNNAGG	1 cut(s)	1100
BstF5I	GGATG	3 cut(s)	276, 649, 961
BstFNI	CGCG	1 cut(s)	500
BstKTI	GATC	6 cut(s)	109, 513, 578, 795, 1008, 1102
BstMAI	GTCTC	2 cut(s)	106, 1106
BstMBI	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
BstMCI	CGRYCG	1 cut(s)	1008
BstMWI	GCNNNNNNNGC	3 cut(s)	440, 1001, 1073
BstNSI	RCATGY	1 cut(s)	993
BstUI	CGCG	1 cut(s)	500
BstV1I	GCAGC	1 cut(s)	988
BstV2I	GAAGAC	1 cut(s)	177
BtsCI	GGATG	3 cut(s)	276, 649, 961
BtsI	GCAGTG	2 cut(s)	279, 883
BtsIMutI	CAGTG	4 cut(s)	279, 306, 405, 883
CaiI	CAGNNNCTG	1 cut(s)	1001
Csp6I	GTAC	2 cut(s)	247, 732
CviAII	CATG	3 cut(s)	582, 990, 1023
CviJI	RGCY	7 cut(s)	48, 151, 312, 448, 810, 854, 1095
CviKI_1	RGCY	7 cut(s)	48, 151, 312, 448, 810, 854, 1095
CviQI	GTAC	2 cut(s)	247, 732
DdeI	CTNAG	7 cut(s)	147, 437, 557, 571, 691, 889, 975
DpnI	GATC	6 cut(s)	108, 512, 577, 794, 1007, 1101
DpnII	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
Eam1104I	CTCTTC	2 cut(s)	399, 907
EarI	CTCTTC	2 cut(s)	399, 907
Eco24I	GRGCYC	1 cut(s)	812
Eco31I	GGTCTC	2 cut(s)	106, 1106
Eco57I	CTGAAG	1 cut(s)	1109
EcoNI	CCTNNNNNAGG	1 cut(s)	1100
EcoT38I	GRGCYC	1 cut(s)	812
FaeI	CATG	3 cut(s)	585, 993, 1026
FatI	CATG	3 cut(s)	581, 989, 1022
FbaI	TGATCA	1 cut(s)	1099
FblI	GTMKAC	1 cut(s)	203
Fnu4HI	GCNGC	2 cut(s)	921, 1002
FokI	GGATG	3 cut(s)	283, 656, 968
FriOI	GRGCYC	1 cut(s)	812
Fsp4HI	GCNGC	2 cut(s)	921, 1002
FspBI	CTAG	4 cut(s)	87, 222, 534, 1073
GluI	GCNGC	2 cut(s)	921, 1002
HapII	CCGG	3 cut(s)	152, 252, 953
Hin1II	CATG	3 cut(s)	585, 993, 1026
HinfI	GANTC	8 cut(s)	93, 124, 167, 255, 460, 474, 1014, 1089
HpaII	CCGG	3 cut(s)	152, 252, 953
HphI	GGTGA	3 cut(s)	173, 362, 773
Hpy166II	GTNNAC	2 cut(s)	204, 249
Hpy188I	TCNGA	5 cut(s)	106, 111, 129, 148, 316
Hpy188III	TCNNGA	3 cut(s)	514, 573, 953
Hpy8I	GTNNAC	2 cut(s)	204, 249
Hpy99I	CGWCG	3 cut(s)	73, 181, 380
HpyAV	CCTTC	3 cut(s)	449, 759, 1004
HpyCH4III	ACNGT	4 cut(s)	161, 177, 230, 731
HpyCH4IV	ACGT	1 cut(s)	939
HpyCH4V	TGCA	6 cut(s)	443, 521, 539, 655, 682, 995
HpyF10VI	GCNNNNNNNGC	3 cut(s)	440, 1001, 1073
HpyF3I	CTNAG	7 cut(s)	147, 437, 557, 571, 691, 889, 975
HpySE526I	ACGT	1 cut(s)	939
Hsp92II	CATG	3 cut(s)	585, 993, 1026
Kpn2I	TCCGGA	1 cut(s)	952
Ksp22I	TGATCA	1 cut(s)	1099
Kzo9I	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
LmnI	GCTCC	2 cut(s)	317, 851
Lsp1109I	GCAGC	1 cut(s)	988
LweI	GCATC	3 cut(s)	307, 536, 988
MaeI	CTAG	4 cut(s)	87, 222, 534, 1073
MaeII	ACGT	1 cut(s)	939
MaeIII	GTNAC	5 cut(s)	73, 224, 304, 427, 761
MalI	GATC	6 cut(s)	108, 512, 577, 794, 1007, 1101
MbiI	CCGCTC	1 cut(s)	434
MboI	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
MboII	GAAGA	4 cut(s)	132, 177, 386, 924
MhlI	GDGCHC	1 cut(s)	812
MroI	TCCGGA	1 cut(s)	952
MroXI	GAANNNNTTC	1 cut(s)	948
MseI	TTAA	2 cut(s)	132, 1046
MslI	CAYNNNNRTG	1 cut(s)	874
MspCI	CTTAAG	1 cut(s)	1045
MspI	CCGG	3 cut(s)	152, 252, 953
Mva1269I	GAATGC	1 cut(s)	869
MvnI	CGCG	1 cut(s)	500
MwoI	GCNNNNNNNGC	3 cut(s)	440, 1001, 1073
NdeII	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
NlaIII	CATG	3 cut(s)	585, 993, 1026
NlaIV	GGNNCC	2 cut(s)	174, 313
NmuCI	GTSAC	2 cut(s)	304, 761
NspI	RCATGY	1 cut(s)	993
PctI	GAATGC	1 cut(s)	869
PdmI	GAANNNNTTC	1 cut(s)	948
PfeI	GAWTC	8 cut(s)	93, 124, 167, 255, 460, 474, 1014, 1089
PflMI	CCANNNNNTGG	1 cut(s)	404
PkrI	GCNGC	2 cut(s)	922, 1003
Ple19I	CGATCG	1 cut(s)	1008
Ppu21I	YACGTR	1 cut(s)	940
PspN4I	GGNNCC	2 cut(s)	174, 313
PstNI	CAGNNNCTG	1 cut(s)	1001
PvuI	CGATCG	1 cut(s)	1008
RsaI	GTAC	2 cut(s)	248, 733
RsaNI	GTAC	2 cut(s)	247, 732
RseI	CAYNNNNRTG	1 cut(s)	874
SaqAI	TTAA	2 cut(s)	132, 1046
SatI	GCNGC	2 cut(s)	921, 1002
Sau3AI	GATC	6 cut(s)	106, 510, 575, 792, 1005, 1099
ScaI	AGTACT	1 cut(s)	733
SduI	GDGCHC	1 cut(s)	812
SfaNI	GCATC	3 cut(s)	307, 536, 988
SmiMI	CAYNNNNRTG	1 cut(s)	874
SmlI	CTYRAG	3 cut(s)	299, 983, 1045
SmoI	CTYRAG	3 cut(s)	299, 983, 1045
SpeI	ACTAGT	1 cut(s)	221
SsiI	CCGC	6 cut(s)	261, 348, 432, 920, 1050, 1076
SspMI	CTAG	4 cut(s)	87, 222, 534, 1073
TaaI	ACNGT	4 cut(s)	161, 177, 230, 731
TaiI	ACGT	1 cut(s)	942
TaqI	TCGA	4 cut(s)	96, 233, 806, 1008
TatI	WGTACW	1 cut(s)	731
TauI	GCSGC	1 cut(s)	923
TfiI	GAWTC	8 cut(s)	93, 124, 167, 255, 460, 474, 1014, 1089
Tru1I	TTAA	2 cut(s)	132, 1046
Tru9I	TTAA	2 cut(s)	132, 1046
TscAI	CASTG	4 cut(s)	286, 313, 405, 890
TseFI	GTSAC	2 cut(s)	304, 761
TseI	GCWGC	1 cut(s)	1001
Tsp45I	GTSAC	2 cut(s)	304, 761
TspDTI	ATGAA	3 cut(s)	29, 132, 789
TspGWI	ACGGA	2 cut(s)	41, 57
TspRI	CASTG	4 cut(s)	286, 313, 405, 890
Van91I	CCANNNNNTGG	1 cut(s)	404
Vha464I	CTTAAG	1 cut(s)	1045
XagI	CCTNNNNNAGG	1 cut(s)	1100
XceI	RCATGY	1 cut(s)	993
XmiI	GTMKAC	1 cut(s)	203
XmnI	GAANNNNTTC	1 cut(s)	948
XspI	CTAG	4 cut(s)	87, 222, 534, 1073
ZrmI	AGTACT	1 cut(s)	733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.