Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010979

Physical Location & Seq

Genomic Coordinates Forward (+)

17505789 .. 17508699

Gene Structure 2911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G176300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1107 bp

ATGGCTACCTTGGCGTTCGCGAGCCTAACATCTCCTCCATTCTGGTCGGCGCGAAGGTCTCTGCCCATCCATGGAAGATTCGCTTTTCTCCATAAAACGCTGGGTTGGGGTCGGAGATCTCTGCTGCTTCCCATAACATGTTCTTCTTCCGAATCCGAGCCGAACCAAAACGCCGACTCCGATGCCAAAACGGCGCCGTTGTCTTCGAGTAGCTTAACCGACAAACTATATGTAGGGCTCGGAGGCGTTGGGTTTCTAGAAACGACGTACTTGACGTATCTCAAGCTAACGAATTCCGATGCCTTTTGCCCAATCGGCGGTGGTAGCTGCGGCGACATCCTCAGCAGCGATTACGCAGTCGTTTTTGGTGTTCCTCTTCCATTGTTTGGGATGGTTGCATATGGGTTAGTTGCTACTCTTGGTGTGCAGCTATTGACTGCAAAGAAGTTGCCTTTTGGGATTGGTGAATCTAATGCTCGCCTGGTTTTACTTGGGACTACAACTTCCATGGCAGCTGCTAGCGCTTGTTTTTTGTACATTCTTAGCACTAAATTTTCAGGAGCTTCTTGCTCGTATTGTTTGTTATCAGCTTTGCTCTCTTTCACCTTATTTTTCATCACTTTAAAGGATTTAGGGTTGGAAAAAGTACAGAAAGAGGTGGGCTTGCTGCTGTGTATAGCTAGCTTGGTGTTTGTGACTCTCAACAGGTCATATAGTGCTTATCCGCCTGTCTCCTCAAGCCCGTCGGAAATTGATCTTCCATATTTTACAACTGAGATAACAACACCGTCAAGTCCTTTTGCTATAGCTCTTGCAAAGCATCTGAAAGCTATAGGTGCTAAAATGTATGGGGCTTTCTGGTGTTCGCATTGTGTAGAACAAAAACAGATGTTTGGACGTGAGGCAGCAAAGCTGCTGAACTATGTTGAGTGCTTCCCTGGTGGATTTAGGAAGGGAACTATAATGGAAAAGGCATGTATTGATGTTGGAATTGAAGGTTTTCCTACATGGGTGATCAACGGGCAGGTTTTGAGTGGAGAAAAAGATTTTACAGAGCTCGCACAGGAATCTGGGTTTGAGTTGAATGAATCCAGTCCTCCCCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003955 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0010207 GO:0015979 GO:0016043 GO:0016491 GO:0016651 GO:0016655 GO:0019684 GO:0022607 GO:0034622 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VKOR

Protein Analysis

369

Amino Acids

39.41

Weight (kDa)

6.44

Isoelectric Point (pI)

50.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010979)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35760 AT4G35760
fragaria_vesca	FvH4_1g10920 FvH4_1g10920
malus_domestica	MD02G1122300.v1.1 MD15G1236200.v1.1
prunus_persica	Prupe.7G176300_v2.0.a1
pyrus_communis	pycom02g09520 pycom15g21020
rosa_chinensis	RchiOBHm_Chr2g0098181
rosa_laevigata	RLG00000016769
rosa_multiflora	Rmu_sc0009178.1_g000009 Rmu_sc0023861.1_g000003
rosa_roxburghii	Rroxscaffold_2G00144220
rosa_rugosa	Rorug02G0070800
rosa_samantha	Rh2AG118100 Rh2BG121100 Rh2CG122700 Rh2DG122600
rosa_wichuraiana	Rw2G009240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1015
AccB1I	GGYRCC	1 cut(s)	193
AccB7I	CCANNNNNTGG	1 cut(s)	386
AccII	CGCG	2 cut(s)	20, 52
AciI	CCGC	3 cut(s)	318, 330, 725
AcsI	RAATTY	2 cut(s)	292, 551
AcyI	GRCGYC	1 cut(s)	194
AfaI	GTAC	3 cut(s)	269, 536, 648
AfeI	AGCGCT	1 cut(s)	523
AfiI	CCNNNNNNNGG	3 cut(s)	71, 317, 386
AflIII	ACRYGT	1 cut(s)	137
AgsI	TTSAA	2 cut(s)	995, 1084
AjiI	CACGTC	1 cut(s)	899
AjnI	CCWGG	2 cut(s)	480, 937
Alw21I	GWGCWC	1 cut(s)	1059
Alw26I	GTCTC	2 cut(s)	63, 736
Aor51HI	AGCGCT	1 cut(s)	523
ApeKI	GCWGC	9 cut(s)	124, 327, 345, 427, 512, 515, 667, 905, 913
ApoI	RAATTY	2 cut(s)	292, 551
Asp700I	GAANNNNTTC	1 cut(s)	999
AspLEI	GCGC	3 cut(s)	52, 196, 524
AsuHPI	GGTGA	3 cut(s)	476, 595, 1024
AsuNHI	GCTAGC	2 cut(s)	518, 680
BanI	GGYRCC	1 cut(s)	193
BanII	GRGCYC	2 cut(s)	240, 1059
BbsI	GAAGAC	1 cut(s)	195
Bbv12I	GWGCWC	1 cut(s)	1059
BbvCI	CCTCAGC	1 cut(s)	341
BbvI	GCAGC	9 cut(s)	111, 314, 357, 439, 502, 524, 654, 900, 917
BccI	CCATC	2 cut(s)	74, 385
BceAI	ACGGC	2 cut(s)	181, 207
BcgI	CGANNNNNNTGC	2 cut(s)	164, 198
BciT130I	CCWGG	2 cut(s)	482, 939
BclI	TGATCA	1 cut(s)	1014
BcoDI	GTCTC	2 cut(s)	63, 736
BfaI	CTAG	3 cut(s)	257, 519, 681
BfmI	CTRYAG	2 cut(s)	804, 831
BfoI	RGCGCY	2 cut(s)	197, 525
BfuAI	ACCTGC	1 cut(s)	1015
BglI	GCCNNNNNGGC	2 cut(s)	191, 315
BglII	AGATCT	1 cut(s)	116
Bme1390I	CCNGG	2 cut(s)	482, 939
BmgBI	CACGTC	1 cut(s)	899
BmiI	GGNNCC	1 cut(s)	195
BmrFI	CCNGG	2 cut(s)	482, 939
BmsI	GCATC	3 cut(s)	172, 289, 829
BmtI	GCTAGC	2 cut(s)	522, 684
BpiI	GAAGAC	1 cut(s)	195
Bpu10I	CCTNAGC	1 cut(s)	341
BpuEI	CTTGAG	2 cut(s)	266, 721
BsaHI	GRCGYC	1 cut(s)	194
BsaI	GGTCTC	1 cut(s)	63
BsaJI	CCNNGG	4 cut(s)	9, 70, 507, 937
BsaXI	ACNNNNNCTCC	4 cut(s)	19, 49, 161, 191
Bsc4I	CCNNNNNNNGG	3 cut(s)	71, 317, 386
Bse1I	ACTGG	1 cut(s)	1092
BseBI	CCWGG	2 cut(s)	482, 939
BseDI	CCNNGG	4 cut(s)	9, 70, 507, 937
BseGI	GGATG	3 cut(s)	66, 336, 396
BseLI	CCNNNNNNNGG	3 cut(s)	71, 317, 386
BseMII	CTCAG	2 cut(s)	355, 765
BseNI	ACTGG	1 cut(s)	1092
BseRI	GAGGAG	2 cut(s)	24, 724
BseXI	GCAGC	9 cut(s)	111, 314, 357, 439, 502, 524, 654, 900, 917
BseYI	CCCAGC	1 cut(s)	100
BsgI	GTGCAG	1 cut(s)	446
Bsh1236I	CGCG	2 cut(s)	20, 52
BshNI	GGYRCC	1 cut(s)	193
BsiHKAI	GWGCWC	1 cut(s)	1059
BslFI	GGGAC	1 cut(s)	508
BslI	CCNNNNNNNGG	3 cut(s)	71, 317, 386
BsmAI	GTCTC	2 cut(s)	63, 736
BsmFI	GGGAC	1 cut(s)	508
Bso31I	GGTCTC	1 cut(s)	63
Bsp1286I	GDGCHC	2 cut(s)	240, 1059
Bsp1407I	TGTACA	1 cut(s)	534
Bsp143I	GATC	3 cut(s)	116, 754, 1014
Bsp19I	CCATGG	2 cut(s)	70, 507
Bsp68I	TCGCGA	1 cut(s)	20
BspACI	CCGC	3 cut(s)	318, 330, 725
BspCNI	CTCAG	2 cut(s)	354, 766
BspFNI	CGCG	2 cut(s)	20, 52
BspLI	GGNNCC	1 cut(s)	195
BspMI	ACCTGC	1 cut(s)	1015
BspOI	GCTAGC	2 cut(s)	522, 684
BspT107I	GGYRCC	1 cut(s)	193
BspTNI	GGTCTC	1 cut(s)	63
BsrGI	TGTACA	1 cut(s)	534
BsrI	ACTGG	1 cut(s)	1092
BssECI	CCNNGG	4 cut(s)	9, 70, 507, 937
BssMI	GATC	3 cut(s)	116, 754, 1014
BssNI	GRCGYC	1 cut(s)	194
BssT1I	CCWWGG	3 cut(s)	9, 70, 507
Bst2UI	CCWGG	2 cut(s)	482, 939
Bst4CI	ACNGT	1 cut(s)	789
Bst6I	CTCTTC	1 cut(s)	381
BstACI	GRCGYC	1 cut(s)	194
BstAUI	TGTACA	1 cut(s)	534
BstC8I	GCNNGC	6 cut(s)	22, 478, 520, 665, 682, 1059
BstDEI	CTNAG	3 cut(s)	341, 542, 774
BstDSI	CCRYGG	2 cut(s)	70, 507
BstF5I	GGATG	3 cut(s)	66, 336, 396
BstFNI	CGCG	2 cut(s)	20, 52
BstH2I	RGCGCY	2 cut(s)	197, 525
BstHHI	GCGC	3 cut(s)	52, 196, 524
BstKTI	GATC	3 cut(s)	119, 757, 1017
BstMAI	GTCTC	2 cut(s)	63, 736
BstMBI	GATC	3 cut(s)	116, 754, 1014
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 191, 315, 324, 521, 836
BstNI	CCWGG	2 cut(s)	482, 939
BstNSI	RCATGY	2 cut(s)	141, 978
BstSCI	CCNGG	2 cut(s)	480, 937
BstSFI	CTRYAG	2 cut(s)	804, 831
BstUI	CGCG	2 cut(s)	20, 52
BstV1I	GCAGC	9 cut(s)	111, 314, 357, 439, 502, 524, 654, 900, 917
BstV2I	GAAGAC	1 cut(s)	195
BstX2I	RGATCY	1 cut(s)	116
BstYI	RGATCY	1 cut(s)	116
BtgI	CCRYGG	2 cut(s)	70, 507
BtrI	CACGTC	1 cut(s)	899
BtsCI	GGATG	3 cut(s)	66, 336, 396
BtuMI	TCGCGA	1 cut(s)	20
BveI	ACCTGC	1 cut(s)	1015
Cac8I	GCNNGC	6 cut(s)	22, 478, 520, 665, 682, 1059
CfoI	GCGC	3 cut(s)	52, 196, 524
Csp6I	GTAC	3 cut(s)	268, 535, 647
CviAII	CATG	5 cut(s)	71, 138, 508, 975, 1008
CviQI	GTAC	3 cut(s)	268, 535, 647
DdeI	CTNAG	3 cut(s)	341, 542, 774
DinI	GGCGCC	1 cut(s)	195
DpnI	GATC	3 cut(s)	118, 756, 1016
DpnII	GATC	3 cut(s)	116, 754, 1014
DraI	TTTAAA	1 cut(s)	624
Eam1104I	CTCTTC	1 cut(s)	381
EarI	CTCTTC	1 cut(s)	381
EciI	GGCGGA	1 cut(s)	714
Ecl136II	GAGCTC	1 cut(s)	1057
Eco130I	CCWWGG	3 cut(s)	9, 70, 507
Eco24I	GRGCYC	2 cut(s)	240, 1059
Eco31I	GGTCTC	1 cut(s)	63
Eco47III	AGCGCT	1 cut(s)	523
Eco53kI	GAGCTC	1 cut(s)	1057
EcoICRI	GAGCTC	1 cut(s)	1057
EcoRI	GAATTC	1 cut(s)	292
EcoRII	CCWGG	2 cut(s)	480, 937
EcoT14I	CCWWGG	3 cut(s)	9, 70, 507
EcoT38I	GRGCYC	2 cut(s)	240, 1059
EgeI	GGCGCC	1 cut(s)	195
EheI	GGCGCC	1 cut(s)	195
ErhI	CCWWGG	3 cut(s)	9, 70, 507
FaeI	CATG	5 cut(s)	74, 141, 511, 978, 1011
FalI	AAGNNNNNCTT	2 cut(s)	67, 99
FaqI	GGGAC	1 cut(s)	508
FatI	CATG	5 cut(s)	70, 137, 507, 974, 1007
FauNDI	CATATG	1 cut(s)	400
FbaI	TGATCA	1 cut(s)	1014
FokI	GGATG	3 cut(s)	53, 323, 403
FriOI	GRGCYC	2 cut(s)	240, 1059
FspBI	CTAG	3 cut(s)	257, 519, 681
GlaI	GCGC	3 cut(s)	51, 195, 523
GsaI	CCCAGC	1 cut(s)	104
HaeII	RGCGCY	2 cut(s)	197, 525
HhaI	GCGC	3 cut(s)	52, 196, 524
Hin1I	GRCGYC	1 cut(s)	194
Hin1II	CATG	5 cut(s)	74, 141, 511, 978, 1011
Hin6I	GCGC	3 cut(s)	50, 194, 522
HinP1I	GCGC	3 cut(s)	50, 194, 522
HinfI	GANTC	7 cut(s)	78, 152, 176, 467, 697, 1067, 1088
HphI	GGTGA	3 cut(s)	476, 595, 1024
Hpy188I	TCNGA	8 cut(s)	114, 151, 157, 181, 242, 298, 748, 825
Hpy188III	TCNNGA	3 cut(s)	19, 257, 558
Hpy99I	CGWCG	2 cut(s)	268, 748
HpyAV	CCTTC	3 cut(s)	48, 946, 989
HpyCH4III	ACNGT	1 cut(s)	789
HpyCH4IV	ACGT	3 cut(s)	266, 275, 898
HpyCH4V	TGCA	4 cut(s)	398, 427, 440, 815
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 191, 315, 324, 521, 836
HpyF3I	CTNAG	3 cut(s)	341, 542, 774
HpySE526I	ACGT	3 cut(s)	266, 275, 898
Hsp92I	GRCGYC	1 cut(s)	194
Hsp92II	CATG	5 cut(s)	74, 141, 511, 978, 1011
HspAI	GCGC	3 cut(s)	50, 194, 522
KasI	GGCGCC	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	1014
Kzo9I	GATC	3 cut(s)	116, 754, 1014
LmnI	GCTCC	1 cut(s)	560
Lsp1109I	GCAGC	9 cut(s)	111, 314, 357, 439, 502, 524, 654, 900, 917
LweI	GCATC	3 cut(s)	172, 289, 829
MaeI	CTAG	3 cut(s)	257, 519, 681
MaeII	ACGT	3 cut(s)	266, 275, 898
MaeIII	GTNAC	1 cut(s)	694
MalI	GATC	3 cut(s)	118, 756, 1016
MboI	GATC	3 cut(s)	116, 754, 1014
MboII	GAAGA	6 cut(s)	87, 135, 138, 195, 368, 749
MflI	RGATCY	1 cut(s)	116
MhlI	GDGCHC	2 cut(s)	240, 1059
MluCI	AATT	4 cut(s)	292, 551, 750, 990
Mly113I	GGCGCC	1 cut(s)	194
MlyI	GAGTC	2 cut(s)	170, 691
MmeI	TCCRAC	4 cut(s)	92, 618, 726, 967
MnlI	CCTC	8 cut(s)	45, 236, 350, 384, 649, 745, 895, 1107
MroXI	GAANNNNTTC	1 cut(s)	999
MseI	TTAA	2 cut(s)	215, 623
MspA1I	CMGCKG	1 cut(s)	515
MspR9I	CCNGG	2 cut(s)	482, 939
MvaI	CCWGG	2 cut(s)	482, 939
MvnI	CGCG	2 cut(s)	20, 52
MwoI	GCNNNNNNNGC	6 cut(s)	11, 191, 315, 324, 521, 836
NarI	GGCGCC	1 cut(s)	194
NcoI	CCATGG	2 cut(s)	70, 507
NdeI	CATATG	1 cut(s)	400
NdeII	GATC	3 cut(s)	116, 754, 1014
NheI	GCTAGC	2 cut(s)	518, 680
NlaIII	CATG	5 cut(s)	74, 141, 511, 978, 1011
NlaIV	GGNNCC	1 cut(s)	195
NmuCI	GTSAC	1 cut(s)	694
NruI	TCGCGA	1 cut(s)	20
NspI	RCATGY	2 cut(s)	141, 978
PciI	ACATGT	1 cut(s)	137
PcsI	WCGNNNNNNNCGW	2 cut(s)	177, 272
PdmI	GAANNNNTTC	1 cut(s)	999
PfeI	GAWTC	5 cut(s)	78, 152, 467, 1067, 1088
PflMI	CCANNNNNTGG	1 cut(s)	386
PleI	GAGTC	2 cut(s)	170, 691
PluTI	GGCGCC	1 cut(s)	197
PpsI	GAGTC	2 cut(s)	170, 691
PscI	ACATGT	1 cut(s)	137
Psp124BI	GAGCTC	1 cut(s)	1059
Psp6I	CCWGG	2 cut(s)	480, 937
PspFI	CCCAGC	1 cut(s)	100
PspGI	CCWGG	2 cut(s)	480, 937
PspN4I	GGNNCC	1 cut(s)	195
PsuI	RGATCY	1 cut(s)	116
PvuII	CAGCTG	1 cut(s)	515
RruI	TCGCGA	1 cut(s)	20
RsaI	GTAC	3 cut(s)	269, 536, 648
RsaNI	GTAC	3 cut(s)	268, 535, 647
SacI	GAGCTC	1 cut(s)	1059
SaqAI	TTAA	2 cut(s)	215, 623
Sau3AI	GATC	3 cut(s)	116, 754, 1014
SchI	GAGTC	2 cut(s)	170, 691
ScrFI	CCNGG	2 cut(s)	482, 939
SduI	GDGCHC	2 cut(s)	240, 1059
SfaNI	GCATC	3 cut(s)	172, 289, 829
SfcI	CTRYAG	2 cut(s)	804, 831
SfoI	GGCGCC	1 cut(s)	195
SmlI	CTYRAG	2 cut(s)	281, 736
SmoI	CTYRAG	2 cut(s)	281, 736
Sse9I	AATT	4 cut(s)	292, 551, 750, 990
SsiI	CCGC	3 cut(s)	318, 330, 725
SspDI	GGCGCC	1 cut(s)	193
SspMI	CTAG	3 cut(s)	257, 519, 681
SstI	GAGCTC	1 cut(s)	1059
StyD4I	CCNGG	2 cut(s)	480, 937
StyI	CCWWGG	3 cut(s)	9, 70, 507
TaaI	ACNGT	1 cut(s)	789
TaiI	ACGT	3 cut(s)	269, 278, 901
TaqI	TCGA	1 cut(s)	206
TasI	AATT	4 cut(s)	292, 551, 750, 990
TatI	WGTACW	2 cut(s)	534, 646
TauI	GCSGC	1 cut(s)	333
TfiI	GAWTC	5 cut(s)	78, 152, 467, 1067, 1088
Tru1I	TTAA	2 cut(s)	215, 623
Tru9I	TTAA	2 cut(s)	215, 623
TseFI	GTSAC	1 cut(s)	694
TseI	GCWGC	9 cut(s)	124, 327, 345, 427, 512, 515, 667, 905, 913
Tsp45I	GTSAC	1 cut(s)	694
TspDTI	ATGAA	2 cut(s)	604, 1101
Van91I	CCANNNNNTGG	1 cut(s)	386
XapI	RAATTY	2 cut(s)	292, 551
XbaI	TCTAGA	1 cut(s)	256
XceI	RCATGY	2 cut(s)	141, 978
XmnI	GAANNNNTTC	1 cut(s)	999
XspI	CTAG	3 cut(s)	257, 519, 681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.