MD15G1236200.v1.1

Thiol-disulfide oxidoreductase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
19427529 .. 19439020
11492 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1236200.v1.1.491

Sequence Viewer

Length: 276 bp
ATGGGGCTTTCTGGTGTTCACACTGTGTTGAACAAAAATAGGTACTTAGATCTTAAAATGTTTGGAAGTGAGGCAGCGAAGCTGTTGAATTATGTAGAGTGCTTCCCTGGTGGATTTAGGAAAGGAACTATAATGCAAAAGGAATGCTTTGATGTCGAAATTGAAGGTTTTCCTACATGGGTGATTAATGGGCAGGTTTTGAGTGGAGAAAAAGAGTTGACGGAGCTTGCGCAGGAATCTGGGTTTGATTTGAAAGAATTCAGTCAGCCTCTGTAG

Protein Analysis

92

Amino Acids

10.21

Weight (kDa)

4.89

Isoelectric Point (pI)

40.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010979)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 231
Acc36I ACCTGC 1 cut(s) 184
AcsI RAATTY 1 cut(s) 257
AdeI CACNNNGTG 1 cut(s) 25
AfaI GTAC 1 cut(s) 44
AgsI TTSAA 4 cut(s) 31, 88, 164, 253
AjnI CCWGG 1 cut(s) 106
AluBI AGCT 2 cut(s) 82, 226
AluI AGCT 2 cut(s) 82, 226
AlwNI CAGNNNCTG 1 cut(s) 271
ApeKI GCWGC 1 cut(s) 74
ApoI RAATTY 1 cut(s) 257
AseI ATTAAT 1 cut(s) 186
Asp700I GAANNNNTTC 2 cut(s) 168, 257
AspLEI GCGC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 193
BbvI GCAGC 1 cut(s) 86
BciT130I CCWGG 1 cut(s) 108
BfmI CTRYAG 1 cut(s) 272
BfuAI ACCTGC 1 cut(s) 184
BglII AGATCT 1 cut(s) 49
BisI GCNGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 76
Bme1390I CCNGG 1 cut(s) 108
BmrFI CCNGG 1 cut(s) 108
BsaJI CCNNGG 1 cut(s) 106
BseBI CCWGG 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 106
BseXI GCAGC 1 cut(s) 86
BsmI GAATGC 1 cut(s) 149
Bsp143I GATC 1 cut(s) 49
BspMI ACCTGC 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 106
BssMI GATC 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 108
Bst4CI ACNGT 1 cut(s) 25
BstC8I GCNNGC 1 cut(s) 228
BstDEI CTNAG 1 cut(s) 46
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 1 cut(s) 52
BstMBI GATC 1 cut(s) 49
BstNI CCWGG 1 cut(s) 108
BstSCI CCNGG 1 cut(s) 106
BstSFI CTRYAG 1 cut(s) 272
BstV1I GCAGC 1 cut(s) 86
BstX2I RGATCY 1 cut(s) 49
BstYI RGATCY 1 cut(s) 49
BtsIMutI CAGTG 1 cut(s) 21
BveI ACCTGC 1 cut(s) 184
Cac8I GCNNGC 1 cut(s) 228
CaiI CAGNNNCTG 1 cut(s) 271
CfoI GCGC 1 cut(s) 232
Csp6I GTAC 1 cut(s) 43
CviAII CATG 1 cut(s) 177
CviJI RGCY 4 cut(s) 7, 82, 226, 268
CviKI_1 RGCY 4 cut(s) 7, 82, 226, 268
CviQI GTAC 1 cut(s) 43
DdeI CTNAG 1 cut(s) 46
DpnI GATC 1 cut(s) 51
DpnII GATC 1 cut(s) 49
DraIII CACNNNGTG 1 cut(s) 25
EcoRI GAATTC 1 cut(s) 257
EcoRII CCWGG 1 cut(s) 106
FaeI CATG 1 cut(s) 180
FaiI YATR 3 cut(s) 93, 131, 178
FalI AAGNNNNNCTT 2 cut(s) 131, 163
FatI CATG 1 cut(s) 176
Fnu4HI GCNGC 1 cut(s) 75
Fsp4HI GCNGC 1 cut(s) 75
FspI TGCGCA 1 cut(s) 231
GlaI GCGC 1 cut(s) 231
GluI GCNGC 1 cut(s) 75
HhaI GCGC 1 cut(s) 232
Hin1II CATG 1 cut(s) 180
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HincII GTYRAC 1 cut(s) 219
HindII GTYRAC 1 cut(s) 219
HinfI GANTC 1 cut(s) 236
HphI GGTGA 1 cut(s) 193
Hpy166II GTNNAC 2 cut(s) 19, 219
Hpy8I GTNNAC 2 cut(s) 19, 219
HpyAV CCTTC 1 cut(s) 158
HpyCH4III ACNGT 1 cut(s) 25
HpyCH4V TGCA 1 cut(s) 136
HpyF3I CTNAG 1 cut(s) 46
Hsp92II CATG 1 cut(s) 180
HspAI GCGC 1 cut(s) 230
Kzo9I GATC 1 cut(s) 49
LmnI GCTCC 1 cut(s) 223
LpnPI CCDG 5 cut(s) 93, 120, 179, 218, 225
Lsp1109I GCAGC 1 cut(s) 86
MalI GATC 1 cut(s) 51
MboI GATC 1 cut(s) 49
MflI RGATCY 1 cut(s) 49
MluCI AATT 3 cut(s) 88, 159, 257
MnlI CCTC 1 cut(s) 64
MroXI GAANNNNTTC 2 cut(s) 168, 257
MseI TTAA 2 cut(s) 54, 186
MspR9I CCNGG 1 cut(s) 108
Mva1269I GAATGC 1 cut(s) 149
MvaI CCWGG 1 cut(s) 108
NdeII GATC 1 cut(s) 49
NlaIII CATG 1 cut(s) 180
NsbI TGCGCA 1 cut(s) 231
PctI GAATGC 1 cut(s) 149
PdmI GAANNNNTTC 2 cut(s) 168, 257
PfeI GAWTC 1 cut(s) 236
PkrI GCNGC 1 cut(s) 76
PshBI ATTAAT 1 cut(s) 186
Psp6I CCWGG 1 cut(s) 106
PspGI CCWGG 1 cut(s) 106
PstNI CAGNNNCTG 1 cut(s) 271
PsuI RGATCY 1 cut(s) 49
RsaI GTAC 1 cut(s) 44
RsaNI GTAC 1 cut(s) 43
SaqAI TTAA 2 cut(s) 54, 186
SatI GCNGC 1 cut(s) 75
Sau3AI GATC 1 cut(s) 49
ScrFI CCNGG 1 cut(s) 108
SetI ASST 5 cut(s) 44, 84, 169, 198, 228
SfcI CTRYAG 1 cut(s) 272
SgeI CNNG 8 cut(s) 24, 119, 120, 189, 206, 239, 245, 252
Sse9I AATT 3 cut(s) 88, 159, 257
StyD4I CCNGG 1 cut(s) 106
TaaI ACNGT 1 cut(s) 25
TaqI TCGA 1 cut(s) 156
TasI AATT 3 cut(s) 88, 159, 257
TfiI GAWTC 1 cut(s) 236
Tru1I TTAA 2 cut(s) 54, 186
Tru9I TTAA 2 cut(s) 54, 186
TscAI CASTG 1 cut(s) 28
TseI GCWGC 1 cut(s) 74
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 28
VspI ATTAAT 1 cut(s) 186
XapI RAATTY 1 cut(s) 257
XmnI GAANNNNTTC 2 cut(s) 168, 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.