AT5G03280

Natural resistance-associated macrophage protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002662
Physical Location & Seq
Forward (+)
787428 .. 793404
5977 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G03280.1

Sequence Viewer

Length: 3885 bp
ATGGAAGCTGAAATTGTGAATGTGAGACCTCAGCTAGGGTTTATCCAGAGAATGGTTCCTGCTCTACTTCCTGTCCTTTTGGTTTCTGTCGGATATATTGATCCCGGGAAATGGGTTGCAAATATCGAAGGAGGTGCTCGTTTCGGGTATGACTTGGTGGCAATTACTCTGCTTTTCAATTTTGCCGCCATCTTATGCCAATATGTTGCAGCTCGCATAAGCGTTGTGACTGGTAAACACTTGGCTCAGATCTGCAATGAAGAATATGACAAGTGGACGTGCATGTTCTTGGGCATTCAGGCGGAGTTCTCAGCAATTCTGCTCGACCTTACCATGGTTGTGGGAGTTGCGCATGCACTTAACCTTTTGTTTGGGGTGGAGTTATCCACTGGAGTGTTTTTGGCCGCCATGGATGCGTTTTTATTTCCTGTTTTCGCCTCTTTCCTTGAAAATGGTATGGCAAATACAGTATCCATTTACTCTGCAGGCCTGGTATTACTTCTCTATGTATCTGGCGTCTTGCTGAGTCAGTCTGAGATCCCACTCTCTATGAATGGAGTGTTAACTCGGTTAAATGGAGAGAGCGCATTCGCACTGATGGGTCTTCTTGGCGCAAGCATCGTCCCTCACAATTTTTATATCCATTCTTATTTTGCTGGGGAAAGTACATCTTCGTCTGATGTCGACAAGAGCAGCTTGTGTCAAGACCATTTGTTCGCCATCTTTGGTGTCTTCAGCGGACTGTCACTTGTAAATTATGTATTGATGAATGCAGCAGCTAATGTGTTTCACAGTACTGGCCTTGTGGTACTGACTTTTCACGATGCCTTGTCACTAATGGAGCAGGTATTTATGAGTCCGCTCATTCCAGTGGTCTTTTTGATGCTCTTGTTCTTCTCTAGTCAAATTACCGCACTAGCTTGGGCTTTCGGTGGAGAGGTCGTCCTGCATGACTTCCTGAAGATAGAAATACCCGCTTGGCTTCATCGTGCTACAATCAGAATTCTTGCAGTTGCTCCTGCGCTTTATTGTGTATGGACATCTGGTGCAGACGGAATATACCAGTTACTTATATTCACCCAGGTCTTGGTGGCAATGATGCTTCCTTGCTCGGTAATACCGCTTTTCCGCATTGCTTCGTCGAGACAAATCATGGGTGTCCATAAAATCCCTCAGGTTGGCGAGTTCCTCGCACTTACAACGTTTTTGGGATTTCTGGGGTTGAATGTTGTTTTTGTTGTTGAGATGGTATTTGGGAGCAGTGACTGGGCTGGTGGTTTGAGATGGAATACCGTGATGGGCACCTCGATTCAGTACACCACTCTGCTTGTATCGTCATGTGCATCCTTATGCCTGATACTCTGGCTGGCAGCCACGCCGCTGAAATCTGCGAGTAACAGAGCGGAAGCTCAAATATGGAACATGGATGCTCAAAATGCTTTATCTTATCCATCTGTTCAAGAAGAGGAAATTGAAAGAACAGAAACAAGGAGGAACGAAGACGAATCAATAGTGCGGTTGGAAAGCAGGGTAAAGGATCAGTTGGATACTACGTCTGTTACTAGCTCGGTCTATGATTTGCCAGAGAACATTCTAATGACGGATCAAGAAATCCGTTCGAGCCCTCCAGAGGAAAGAGAGTTGGATGTAAAGTACTCTACCTCTCAAGTTAGTAGTCTTAAGGAAGACTCTGATGTAAAGGAACAGTCTGTATTGCAGTCAACAGTGGTTAATGAGGTCAGTGATAAGGATCTGATTGTTGAAACAAAGATGGCGAAAATTGAACCAATGAGTCCTGTGGAGAAGATTGTTAGCATGGAGAATAACAGCAAGTTTATTGAAAAGGATGTTGAAGGGGTTTCATGGGAAACAGAAGAAGCTACCAAAGCTGCTCCTACAAGCAACTTTACTGTCGGATCTGATGGTCCTCCTTCATTCCGCAGCTTAAGTGGGGAAGGGGGAAGTGGGACTGGAAGCCTTTCACGGTTGCAAGGTTTGGGACGTGCTGCCCGGAGACACTTATCTGCGATCCTTGATGAATTTTGGGGACATTTATATGATTTTCATGGGCAATTGGTTGCTGAAGCCAGGGCAAAGAAACTAGATCAGCTGTTTGGCACTGATCAAAAGTCAGCCTCTTCTATGAAAGCAGATTCGTTTGGAAAAGACATTAGCAGTGGATATTGCATGTCACCAACTGCGAAGGGAATGGATTCACAGATGACTTCAAGTTTATATGATTCACTGAAGCAGCAGAGGACACCGGGAAGTATCGATTCGTTGTATGGATTACAAAGAGGTTCGTCACCGTCACCGTTGGTCAACCGTATGCAGATGTTGGGTGCATATGGTAACACCACTAATAATAATAATGCTTACGAATTGAGTGAGAGAAGATACTCTAGCCTGCGTGCTCCATCATCTTCAGAGGGTTGGGAACACCAACAACCAGCTACAGTTCACGGATACCAGATGAAGTCATATGTAGACAATTTGGCAAAAGAAAGGCTTGAAGCCTTACAATCCCGTGGAGAGATCCCGACATCGAGATCTATGGCGCTTGGTACATTGAGCTATACACAGCAACTTGCTTTAGCCTTGAAACAGAAGTCCCAGAATGGTCTAACCCCTGGACCAGCTCCTGGGTTTGAGAATTTTGCTGGGTCTAGAAGCATATCGCGACAATCTGAAAGATCTTATTACGGTGTTCCATCTTCTGGCAATACTGATACTGTTGGCGCAGCAGTAGCCAATGAGAAAAAATATAGTAGCATGCCAGATATCTCAGGATTGTCTATGTCCGCAAGGAACATGCATTTACCAAACAACAAGAGTGGATACTGGGATCCGTCAAGTGGAGGAGGAGGGTATGGTGCGTCTTATGGTCGGTTAAGCAATGAATCATCGTTATATTCTAATTTGGGGTCACGGGTGGGAGTACCCTCGACTTATGATGACATTTCTCAATCAAGAGGAGGCTACAGAGATGCCTACAGTTTGCCACAGAGTGCAACAACAGGGACCGGATCGCTTTGGTCCAGACAGCCCTTTGAGCAGTTTGGTGTAGCGGAGAGGAATGGTGCTGTTGGTGAGGAGCTCAGGAATAGATCGAATCCGATCAATATAGACAACAACGCTTCTTCTAATGTTGATGCAGAGGCTAAGCTTCTTCAGTCGTTCAGGCACTGTATTCTAAAGCTTATTAAACTTGAAGGATCCGAGTGGTTGTTTGGACAAAGCGATGGAGTTGATGAAGAACTGATTGACCGGGTAGCTGCACGAGAGAAGTTTATCTATGAAGCTGAAGCTCGAGAAATAAACCAGGTGGGTCACATGGGGGAGCCACTAATTTCATCGGTTCCTAACTGTGGAGATGGTTGCGTTTGGAGAGCTGATTTGATTGTGAGCTTTGGAGTTTGGTGCATTCACCGTGTCCTTGACTTGTCTCTCATGGAGAGTCGGCCTGAGCTTTGGGGAAAGTACACTTACGTTCTCAACCGCCTACAGGGAGTGATTGATCCGGCGTTCTCAAAGCTGCGGACACCAATGACACCGTGCTTTTGCCTTCAGATTCCAGCGAGCCACCAGAGAGCGAGTCCGACTTCAGCTAACGGAATGTTACCTCCGGCTGCAAAACCGGCTAAAGGCAAATGCACAACCGCAGTCACACTTCTTGATCTAATCAAAGACGTTGAAATGGCAATCTCTTGTAGAAAAGGCCGAACCGGTACAGCTGCAGGTGATGTGGCTTTCCCAAAGGGGAAAGAGAATTTGGCTTCGGTTTTGAAGCGGTATAAACGTCGGTTATCGAATAAACCAGTAGGTATGAATCAGGATGGACCCGGTTCAAGAAAAAACGTGACTGCGTACGGATCATTGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001736 GO:0001738 GO:0002009 GO:0002237 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0006810 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0007154 GO:0007164 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009755 GO:0009756 GO:0009787 GO:0009789 GO:0009814 GO:0009861 GO:0009871 GO:0009873 GO:0009888 GO:0009914 GO:0009926 GO:0009966 GO:0009967 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010053 GO:0010054 GO:0010087 GO:0010104 GO:0010119 GO:0010150 GO:0010182 GO:0010646 GO:0010647 GO:0010817 GO:0016043 GO:0021700 GO:0022622 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0035556 GO:0042221 GO:0042545 GO:0042742 GO:0043207 GO:0045087 GO:0045229 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051301 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060429 GO:0060918 GO:0065007 GO:0065008 GO:0070297 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0071554 GO:0071555 GO:0071695 GO:0071840 GO:0080134 GO:0090558 GO:0090627 GO:0090693 GO:0097159 GO:0098542 GO:0099402 GO:1901363 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902531 GO:1905392 GO:1905957 GO:1905959
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
Nramp

Protein Analysis

1294

Amino Acids

140.95

Weight (kDa)

5.71

Isoelectric Point (pI)

45.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nramp PF01566 38 - 390 2.5e-81 Natural resistance-associated macrophage protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3728
Acc16I TGCGCA 1 cut(s) 351
Acc36I ACCTGC 2 cut(s) 835, 3728
AccB1I GGYRCC 1 cut(s) 1301
AccB7I CCANNNNNTGG 4 cut(s) 52, 1087, 2642, 2717
AccBSI CCGCTC 2 cut(s) 862, 1403
AccI GTMKAC 2 cut(s) 684, 2487
AccII CGCG 1 cut(s) 2680
AclI AACGTT 1 cut(s) 1202
AcoI YGGCCR 1 cut(s) 402
AcsI RAATTY 4 cut(s) 1002, 2039, 2653, 3769
AcuI CTGAAG 9 cut(s) 718, 980, 2103, 2267, 2409, 3155, 3324, 3551, 3588
AcyI GRCGYC 1 cut(s) 516
AdeI CACNNNGTG 1 cut(s) 3008
AflII CTTAAG 2 cut(s) 1679, 1945
AgeI ACCGGT 1 cut(s) 3725
AjiI CACGTC 2 cut(s) 279, 2003
AjnI CCWGG 6 cut(s) 489, 1080, 2087, 2629, 2641, 3321
AjuI GAANNNNNNNTTGG 2 cut(s) 3755, 3787
AleI CACNNNNGTG 1 cut(s) 392
Alw21I GWGCWC 3 cut(s) 139, 2416, 3099
Alw26I GTCTC 4 cut(s) 19, 1138, 2008, 3450
AlwNI CAGNNNCTG 3 cut(s) 1266, 2642, 3186
Ama87I CYCGRG 2 cut(s) 104, 3309
AoxI GGCC 5 cut(s) 402, 487, 799, 3461, 3718
ApoI RAATTY 4 cut(s) 1002, 2039, 2653, 3769
ArsI GACNNNNNNTTYG 2 cut(s) 698, 730
AsiGI ACCGGT 1 cut(s) 3725
Asp700I GAANNNNTTC 2 cut(s) 1978, 2212
AspLEI GCGC 6 cut(s) 352, 587, 614, 1024, 2560, 2741
AspS9I GGNCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
AsuC2I CCSGG 6 cut(s) 105, 106, 2011, 2265, 3269, 3843
AsuHPI GGTGA 7 cut(s) 1069, 2184, 2298, 2304, 3101, 3419, 3752
AvaI CYCGRG 2 cut(s) 104, 3309
AvaII GGWCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
AxyI CCTNAGG 1 cut(s) 1173
BaeGI GKGCMC 1 cut(s) 1304
BamHI GGATCC 2 cut(s) 2845, 3215
BanI GGYRCC 1 cut(s) 1301
BanII GRGCYC 2 cut(s) 1625, 3099
BauI CACGAG 1 cut(s) 3279
BbsI GAAGAC 4 cut(s) 596, 724, 1506, 1692
Bbv12I GWGCWC 3 cut(s) 139, 2416, 3099
BbvCI CCTCAGC 1 cut(s) 30
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 6 cut(s) 491, 1082, 2089, 2631, 2643, 3323
BciVI GTATCC 4 cut(s) 481, 1540, 2459, 2831
BclI TGATCA 1 cut(s) 2122
BcnI CCSGG 6 cut(s) 105, 106, 2011, 2265, 3269, 3843
BcoDI GTCTC 4 cut(s) 19, 1138, 2008, 3450
BfaI CTAG 7 cut(s) 35, 900, 917, 1563, 2102, 2403, 2667
BfmI CTRYAG 6 cut(s) 483, 2454, 2980, 2992, 3503, 3735
BfoI RGCGCY 1 cut(s) 2561
BfrI CTTAAG 2 cut(s) 1679, 1945
BfuAI ACCTGC 2 cut(s) 835, 3728
BfuI GTATCC 4 cut(s) 481, 1540, 2459, 2831
BglII AGATCT 3 cut(s) 249, 2549, 2693
BlpI GCTNAGC 1 cut(s) 3162
BmcAI AGTACT 2 cut(s) 796, 1655
Bme18I GGWCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
BmeT110I CYCGRG 2 cut(s) 104, 3309
BmgBI CACGTC 2 cut(s) 279, 2003
BmgT120I GGNCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
BmiI GGNNCC 8 cut(s) 57, 1303, 2847, 3022, 3217, 3342, 3360, 3841
BmrI ACTGGG 2 cut(s) 1276, 2851
BmsI GCATC 9 cut(s) 403, 627, 814, 873, 1089, 1352, 1417, 2977, 3142
BmuI ACTGGG 2 cut(s) 1276, 2851
BpiI GAAGAC 4 cut(s) 596, 724, 1506, 1692
BpmI CTGGAG 2 cut(s) 411, 1611
Bpu10I CCTNAGC 3 cut(s) 30, 3098, 3465
Bpu1102I GCTNAGC 1 cut(s) 3162
BpuEI CTTGAG 1 cut(s) 1650
BpuMI CCSGG 6 cut(s) 105, 106, 2011, 2265, 3269, 3843
Bsa29I ATCGAT 1 cut(s) 2274
BsaBI GATNNNNATC 1 cut(s) 1749
BsaHI GRCGYC 1 cut(s) 516
BsaI GGTCTC 1 cut(s) 19
BsaJI CCNNGG 8 cut(s) 104, 333, 408, 1080, 2088, 2527, 2629, 2642
BsaWI WCCGGW 2 cut(s) 3023, 3725
BsaXI ACNNNNNCTCC 2 cut(s) 927, 957
Bse118I RCCGGY 2 cut(s) 3637, 3725
Bse1I ACTGG 9 cut(s) 235, 394, 802, 869, 1063, 1271, 1975, 2846, 3818
Bse21I CCTNAGG 1 cut(s) 1173
Bse3DI GCAATG 4 cut(s) 262, 1101, 1131, 2902
Bse8I GATNNNNATC 1 cut(s) 1749
BseBI CCWGG 6 cut(s) 491, 1082, 2089, 2631, 2643, 3323
BseCI ATCGAT 1 cut(s) 2274
BseDI CCNNGG 8 cut(s) 104, 333, 408, 1080, 2088, 2527, 2629, 2642
BseGI GGATG 6 cut(s) 418, 1343, 1432, 1651, 1852, 3841
BseJI GATNNNNATC 1 cut(s) 1749
BseMI GCAATG 4 cut(s) 262, 1101, 1131, 2902
BseMII CTCAG 9 cut(s) 44, 260, 324, 515, 525, 1187, 2799, 3112, 3456
BseNI ACTGG 9 cut(s) 235, 394, 802, 869, 1063, 1271, 1975, 2846, 3818
BseRI GAGGAG 4 cut(s) 2874, 2877, 2988, 3107
BseSI GKGCMC 1 cut(s) 1304
BseYI CCCAGC 2 cut(s) 656, 2660
BsgI GTGCAG 2 cut(s) 1068, 3261
Bsh1236I CGCG 1 cut(s) 2680
BshFI GGCC 5 cut(s) 404, 489, 801, 3463, 3720
BshNI GGYRCC 1 cut(s) 1301
BshTI ACCGGT 1 cut(s) 3725
BshVI ATCGAT 1 cut(s) 2274
BsiHKAI GWGCWC 3 cut(s) 139, 2416, 3099
BsiHKCI CYCGRG 2 cut(s) 104, 3309
BsiWI CGTACG 1 cut(s) 3867
BslFI GGGAC 6 cut(s) 608, 1981, 2013, 2061, 2596, 3034
BsmAI GTCTC 4 cut(s) 19, 1138, 2008, 3450
BsmFI GGGAC 6 cut(s) 608, 1981, 2013, 2061, 2596, 3034
BsmI GAATGC 4 cut(s) 294, 587, 775, 3423
BsnI GGCC 5 cut(s) 404, 489, 801, 3463, 3720
Bso31I GGTCTC 1 cut(s) 19
BsoBI CYCGRG 2 cut(s) 104, 3309
Bsp1286I GDGCHC 5 cut(s) 139, 1304, 1625, 2416, 3099
Bsp1720I GCTNAGC 1 cut(s) 3162
Bsp19I CCATGG 2 cut(s) 333, 408
Bsp68I TCGCGA 1 cut(s) 2680
BspANI GGCC 5 cut(s) 404, 489, 801, 3463, 3720
BspCNI CTCAG 9 cut(s) 43, 259, 323, 516, 526, 1186, 2798, 3111, 3457
BspDI ATCGAT 1 cut(s) 2274
BspFNI CGCG 1 cut(s) 2680
BspLI GGNNCC 8 cut(s) 57, 1303, 2847, 3022, 3217, 3342, 3360, 3841
BspMAI CTGCAG 2 cut(s) 487, 3739
BspMI ACCTGC 2 cut(s) 835, 3728
BspT107I GGYRCC 1 cut(s) 1301
BspTI CTTAAG 2 cut(s) 1679, 1945
BspTNI GGTCTC 1 cut(s) 19
BsrBI CCGCTC 2 cut(s) 862, 1403
BsrDI GCAATG 4 cut(s) 262, 1101, 1131, 2902
BsrFI RCCGGY 2 cut(s) 3637, 3725
BsrI ACTGG 9 cut(s) 235, 394, 802, 869, 1063, 1271, 1975, 2846, 3818
BssAI RCCGGY 2 cut(s) 3637, 3725
BssECI CCNNGG 8 cut(s) 104, 333, 408, 1080, 2088, 2527, 2629, 2642
BssNI GRCGYC 1 cut(s) 516
BssSI CACGAG 1 cut(s) 3279
BssT1I CCWWGG 2 cut(s) 333, 408
Bst2BI CACGAG 1 cut(s) 3279
Bst2UI CCWGG 6 cut(s) 491, 1082, 2089, 2631, 2643, 3323
Bst6I CTCTTC 2 cut(s) 1458, 2143
BstACI GRCGYC 1 cut(s) 516
BstAFI CTTAAG 2 cut(s) 1679, 1945
BstC8I GCNNGC 9 cut(s) 214, 354, 487, 616, 1368, 2408, 2412, 2774, 3580
BstDSI CCRYGG 3 cut(s) 333, 408, 2527
BstENI CCTNNNNNAGG 1 cut(s) 33
BstF5I GGATG 6 cut(s) 418, 1343, 1432, 1651, 1852, 3841
BstFNI CGCG 1 cut(s) 2680
BstH2I RGCGCY 1 cut(s) 2561
BstHHI GCGC 6 cut(s) 352, 587, 614, 1024, 2560, 2741
BstMAI GTCTC 4 cut(s) 19, 1138, 2008, 3450
BstMWI GCNNNNNNNGC 6 cut(s) 413, 1436, 1886, 2747, 3052, 3638
BstNI CCWGG 6 cut(s) 491, 1082, 2089, 2631, 2643, 3323
BstNSI RCATGY 5 cut(s) 286, 356, 2191, 2776, 2815
BstSFI CTRYAG 6 cut(s) 483, 2454, 2980, 2992, 3503, 3735
BstSLI GKGCMC 1 cut(s) 1304
BstUI CGCG 1 cut(s) 2680
BstV2I GAAGAC 4 cut(s) 596, 724, 1506, 1692
BstX2I RGATCY 9 cut(s) 249, 537, 1750, 1916, 2535, 2549, 2693, 2845, 3215
BstXI CCANNNNNNTGG 1 cut(s) 340
BstYI RGATCY 9 cut(s) 249, 537, 1750, 1916, 2535, 2549, 2693, 2845, 3215
Bsu15I ATCGAT 1 cut(s) 2274
Bsu36I CCTNAGG 1 cut(s) 1173
BsuI GTATCC 4 cut(s) 481, 1540, 2459, 2831
BsuRI GGCC 5 cut(s) 404, 489, 801, 3463, 3720
BsuTUI ATCGAT 1 cut(s) 2274
BtgI CCRYGG 3 cut(s) 333, 408, 2527
BtgZI GCGATG 1 cut(s) 3255
BtrI CACGTC 2 cut(s) 279, 2003
BtsCI GGATG 6 cut(s) 418, 1343, 1432, 1651, 1852, 3841
BtsI GCAGTG 2 cut(s) 1267, 2182
BtuMI TCGCGA 1 cut(s) 2680
BveI ACCTGC 2 cut(s) 835, 3728
Cac8I GCNNGC 9 cut(s) 214, 354, 487, 616, 1368, 2408, 2412, 2774, 3580
CaiI CAGNNNCTG 3 cut(s) 1266, 2642, 3186
CfoI GCGC 6 cut(s) 352, 587, 614, 1024, 2560, 2741
Cfr10I RCCGGY 2 cut(s) 3637, 3725
Cfr13I GGNCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
Cfr9I CCCGGG 1 cut(s) 104
ClaI ATCGAT 1 cut(s) 2274
CseI GACGC 2 cut(s) 505, 2865
CsiI ACCWGGT 1 cut(s) 3321
CspAI ACCGGT 1 cut(s) 3725
CspCI CAANNNNNGTGG 4 cut(s) 1309, 1344, 2815, 2850
DraIII CACNNNGTG 1 cut(s) 3008
EaeI YGGCCR 1 cut(s) 402
Eam1104I CTCTTC 2 cut(s) 1458, 2143
EarI CTCTTC 2 cut(s) 1458, 2143
EciI GGCGGA 1 cut(s) 317
Ecl136II GAGCTC 1 cut(s) 3097
Eco130I CCWWGG 2 cut(s) 333, 408
Eco147I AGGCCT 1 cut(s) 489
Eco24I GRGCYC 2 cut(s) 1625, 3099
Eco31I GGTCTC 1 cut(s) 19
Eco32I GATATC 1 cut(s) 2782
Eco47I GGWCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
Eco53kI GAGCTC 1 cut(s) 3097
Eco57I CTGAAG 9 cut(s) 718, 980, 2103, 2267, 2409, 3155, 3324, 3551, 3588
Eco81I CCTNAGG 1 cut(s) 1173
Eco88I CYCGRG 2 cut(s) 104, 3309
EcoICRI GAGCTC 1 cut(s) 3097
EcoNI CCTNNNNNAGG 1 cut(s) 33
EcoRI GAATTC 1 cut(s) 1002
EcoRII CCWGG 6 cut(s) 489, 1080, 2087, 2629, 2641, 3321
EcoRV GATATC 1 cut(s) 2782
EcoT14I CCWWGG 2 cut(s) 333, 408
EcoT22I ATGCAT 1 cut(s) 2817
EcoT38I GRGCYC 2 cut(s) 1625, 3099
ErhI CCWWGG 2 cut(s) 333, 408
FalI AAGNNNNNCTT 6 cut(s) 655, 687, 680, 712, 2493, 2525
FaqI GGGAC 6 cut(s) 608, 1981, 2013, 2061, 2596, 3034
FauI CCCGC 1 cut(s) 982
FauNDI CATATG 2 cut(s) 2347, 2482
FbaI TGATCA 1 cut(s) 2122
FblI GTMKAC 2 cut(s) 684, 2487
FokI GGATG 6 cut(s) 425, 1330, 1439, 1658, 1859, 3848
FriOI GRGCYC 2 cut(s) 1625, 3099
FspBI CTAG 7 cut(s) 35, 900, 917, 1563, 2102, 2403, 2667
FspI TGCGCA 1 cut(s) 351
GlaI GCGC 6 cut(s) 351, 586, 613, 1023, 2559, 2740
GsaI CCCAGC 2 cut(s) 660, 2664
GsuI CTGGAG 2 cut(s) 411, 1611
HaeII RGCGCY 1 cut(s) 2561
HaeIII GGCC 5 cut(s) 404, 489, 801, 3463, 3720
HgaI GACGC 2 cut(s) 505, 2865
HhaI GCGC 6 cut(s) 352, 587, 614, 1024, 2560, 2741
Hin1I GRCGYC 1 cut(s) 516
Hin6I GCGC 6 cut(s) 350, 585, 612, 1022, 2558, 2739
HinP1I GCGC 6 cut(s) 350, 585, 612, 1022, 2558, 2739
HincII GTYRAC 4 cut(s) 564, 685, 1722, 2323
HindII GTYRAC 4 cut(s) 564, 685, 1722, 2323
HindIII AAGCTT 2 cut(s) 3164, 3197
HpaI GTTAAC 1 cut(s) 564
HphI GGTGA 7 cut(s) 1069, 2184, 2298, 2304, 3101, 3419, 3752
Hpy99I CGWCG 2 cut(s) 1144, 3804
HpyAV CCTTC 7 cut(s) 122, 1847, 1941, 1949, 2197, 3206, 3575
HpyCH4IV ACGT 8 cut(s) 278, 1202, 1553, 2002, 3489, 3690, 3799, 3858
HpyF10VI GCNNNNNNNGC 6 cut(s) 413, 1436, 1886, 2747, 3052, 3638
HpySE526I ACGT 8 cut(s) 278, 1202, 1553, 2002, 3489, 3690, 3799, 3858
Hsp92I GRCGYC 1 cut(s) 516
HspAI GCGC 6 cut(s) 350, 585, 612, 1022, 2558, 2739
Ksp22I TGATCA 1 cut(s) 2122
KspAI GTTAAC 1 cut(s) 564
LmnI GCTCC 8 cut(s) 841, 1021, 1257, 1897, 2419, 2644, 3094, 3340
LweI GCATC 9 cut(s) 403, 627, 814, 873, 1089, 1352, 1417, 2977, 3142
MabI ACCWGGT 1 cut(s) 3321
MaeI CTAG 7 cut(s) 35, 900, 917, 1563, 2102, 2403, 2667
MaeII ACGT 8 cut(s) 278, 1202, 1553, 2002, 3489, 3690, 3799, 3858
MbiI CCGCTC 2 cut(s) 862, 1403
MfeI CAATTG 1 cut(s) 2072
MflI RGATCY 9 cut(s) 249, 537, 1750, 1916, 2535, 2549, 2693, 2845, 3215
MhlI GDGCHC 5 cut(s) 139, 1304, 1625, 2416, 3099
MlyI GAGTC 6 cut(s) 535, 865, 1682, 1801, 3466, 3604
MmeI TCCRAC 6 cut(s) 70, 1500, 1524, 1623, 1894, 3623
Mph1103I ATGCAT 1 cut(s) 2817
MroXI GAANNNNTTC 2 cut(s) 1978, 2212
MseI TTAA 8 cut(s) 360, 563, 572, 1680, 1731, 1946, 2891, 3204
MslI CAYNNNNRTG 6 cut(s) 338, 392, 869, 1348, 1595, 2055
MspA1I CMGCKG 4 cut(s) 738, 1381, 2110, 3734
MspCI CTTAAG 2 cut(s) 1679, 1945
MunI CAATTG 1 cut(s) 2072
Mva1269I GAATGC 4 cut(s) 294, 587, 775, 3423
MvaI CCWGG 6 cut(s) 491, 1082, 2089, 2631, 2643, 3323
MvnI CGCG 1 cut(s) 2680
MwoI GCNNNNNNNGC 6 cut(s) 413, 1436, 1886, 2747, 3052, 3638
NciI CCSGG 6 cut(s) 105, 106, 2011, 2265, 3269, 3843
NcoI CCATGG 2 cut(s) 333, 408
NdeI CATATG 2 cut(s) 2347, 2482
NlaIV GGNNCC 8 cut(s) 57, 1303, 2847, 3022, 3217, 3342, 3360, 3841
NruI TCGCGA 1 cut(s) 2680
NsbI TGCGCA 1 cut(s) 351
NsiI ATGCAT 1 cut(s) 2817
NspI RCATGY 5 cut(s) 286, 356, 2191, 2776, 2815
OliI CACNNNNGTG 1 cut(s) 392
PaeI GCATGC 2 cut(s) 356, 2776
PaeR7I CTCGAG 1 cut(s) 3309
PaqCI CACCTGC 1 cut(s) 3728
PceI AGGCCT 1 cut(s) 489
PctI GAATGC 4 cut(s) 294, 587, 775, 3423
PdmI GAANNNNTTC 2 cut(s) 1978, 2212
Pfl23II CGTACG 1 cut(s) 3867
PflMI CCANNNNNTGG 4 cut(s) 52, 1087, 2642, 2717
PinAI ACCGGT 1 cut(s) 3725
PleI GAGTC 6 cut(s) 534, 864, 1682, 1800, 3465, 3603
PpsI GAGTC 6 cut(s) 534, 864, 1682, 1800, 3465, 3603
Psp124BI GAGCTC 1 cut(s) 3099
Psp1406I AACGTT 1 cut(s) 1202
Psp6I CCWGG 6 cut(s) 489, 1080, 2087, 2629, 2641, 3321
PspFI CCCAGC 2 cut(s) 656, 2660
PspGI CCWGG 6 cut(s) 489, 1080, 2087, 2629, 2641, 3321
PspLI CGTACG 1 cut(s) 3867
PspN4I GGNNCC 8 cut(s) 57, 1303, 2847, 3022, 3217, 3342, 3360, 3841
PspPI GGNCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
PstI CTGCAG 2 cut(s) 487, 3739
PstNI CAGNNNCTG 3 cut(s) 1266, 2642, 3186
PsuI RGATCY 9 cut(s) 249, 537, 1750, 1916, 2535, 2549, 2693, 2845, 3215
PvuII CAGCTG 2 cut(s) 2110, 3734
RruI TCGCGA 1 cut(s) 2680
RseI CAYNNNNRTG 6 cut(s) 338, 392, 869, 1348, 1595, 2055
SacI GAGCTC 1 cut(s) 3099
SalI GTCGAC 1 cut(s) 683
SaqAI TTAA 8 cut(s) 360, 563, 572, 1680, 1731, 1946, 2891, 3204
Sau96I GGNCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
ScaI AGTACT 2 cut(s) 796, 1655
SchI GAGTC 6 cut(s) 535, 865, 1682, 1801, 3466, 3604
SduI GDGCHC 5 cut(s) 139, 1304, 1625, 2416, 3099
SexAI ACCWGGT 1 cut(s) 3321
SfaNI GCATC 9 cut(s) 403, 627, 814, 873, 1089, 1352, 1417, 2977, 3142
SfcI CTRYAG 6 cut(s) 483, 2454, 2980, 2992, 3503, 3735
Sfr274I CTCGAG 1 cut(s) 3309
SinI GGWCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
SlaI CTCGAG 1 cut(s) 3309
SmaI CCCGGG 1 cut(s) 106
SmiMI CAYNNNNRTG 6 cut(s) 338, 392, 869, 1348, 1595, 2055
SmlI CTYRAG 4 cut(s) 1665, 1679, 1945, 3309
SmoI CTYRAG 4 cut(s) 1665, 1679, 1945, 3309
SphI GCATGC 2 cut(s) 356, 2776
SseBI AGGCCT 1 cut(s) 489
SspMI CTAG 7 cut(s) 35, 900, 917, 1563, 2102, 2403, 2667
SstI GAGCTC 1 cut(s) 3099
StuI AGGCCT 1 cut(s) 489
StyI CCWWGG 2 cut(s) 333, 408
TaiI ACGT 8 cut(s) 281, 1205, 1556, 2005, 3492, 3693, 3802, 3861
TaqII GACCGA 1 cut(s) 1558
TatI WGTACW 5 cut(s) 665, 794, 1314, 1653, 3480
TauI GCSGC 3 cut(s) 188, 407, 1381
Tru1I TTAA 8 cut(s) 360, 563, 572, 1680, 1731, 1946, 2891, 3204
Tru9I TTAA 8 cut(s) 360, 563, 572, 1680, 1731, 1946, 2891, 3204
TspGWI ACGGA 7 cut(s) 1068, 1604, 1616, 2478, 2838, 3627, 3885
TspMI CCCGGG 1 cut(s) 104
Van91I CCANNNNNTGG 4 cut(s) 52, 1087, 2642, 2717
Vha464I CTTAAG 2 cut(s) 1679, 1945
VpaK11BI GGWCC 5 cut(s) 1925, 2633, 3021, 3036, 3839
XagI CCTNNNNNAGG 1 cut(s) 33
XapI RAATTY 4 cut(s) 1002, 2039, 2653, 3769
XbaI TCTAGA 1 cut(s) 2666
XceI RCATGY 5 cut(s) 286, 356, 2191, 2776, 2815
XhoI CTCGAG 1 cut(s) 3309
XmaI CCCGGG 1 cut(s) 104
XmiI GTMKAC 2 cut(s) 684, 2487
XmnI GAANNNNTTC 2 cut(s) 1978, 2212
XspI CTAG 7 cut(s) 35, 900, 917, 1563, 2102, 2403, 2667
ZrmI AGTACT 2 cut(s) 796, 1655
Zsp2I ATGCAT 1 cut(s) 2817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.