Rorug03G0104500

Ethylene-insensitive protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
8277163 .. 8278528
1366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0104500.1

Sequence Viewer

Length: 606 bp
ATGGCACAAGCAATCATCAGCCCTCACTTCTGCAGTCCGTACCCTGTTGATCTTGGAATCGTCAGACAAGTTCTGTCCGGCAACTTTTCAGTCAAGGATGTTAATGGCAATACTGTTTTCAAAGTCAAAGGAGCATTTTTGAGCTTGCGTGAACGCCGAGTCTTAGTTGATGGTGCTGGGAATCCCATTGTCACTCTTCAAAAGAAGTTGCTGAGTACACATCATAGATGGGAAGTTTATAGGGGTGATAGCACGGATTCGGGGAATCTGGTCTTTAGTGTTAAGAAATCTTCGGTGGTTCAGTTGAAGACGAAATTGCACGTTTTCTTGGCAAATAATAAAGGAGAGTATGCCCCTGACTTCAAGGTGAAGGGAAGTTGGTTTGAACAATCTTGTGTTGTATATTCTGGGAAATCCAAGTCCTCCAACATTTTTGCTGAAATGCACAAGAAGCACACAGTTACAAGCGTGTTGTTTGGGAAGAACAATTTCGTGGTCACAGTGTATCCAGGTGTTGACCAAGCACTCATTGTCGCACTTATTTTCATCCTTAATGAGATAAACTTCAGTGGTTCTGGTTCTAATTCTGGTTCCGGCGGAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001736 GO:0001738 GO:0002009 GO:0002237 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0006810 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0007154 GO:0007164 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009755 GO:0009756 GO:0009787 GO:0009789 GO:0009814 GO:0009861 GO:0009871 GO:0009873 GO:0009888 GO:0009914 GO:0009926 GO:0009966 GO:0009967 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010053 GO:0010054 GO:0010087 GO:0010104 GO:0010119 GO:0010150 GO:0010182 GO:0010646 GO:0010647 GO:0010817 GO:0016043 GO:0021700 GO:0022622 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0035556 GO:0042221 GO:0042545 GO:0042742 GO:0043207 GO:0045087 GO:0045229 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051301 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060429 GO:0060918 GO:0065007 GO:0065008 GO:0070297 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0071554 GO:0071555 GO:0071695 GO:0071840 GO:0080134 GO:0090558 GO:0090627 GO:0090693 GO:0097159 GO:0098542 GO:0099402 GO:1901363 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902531 GO:1905392 GO:1905957 GO:1905959
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

201

Amino Acids

21.94

Weight (kDa)

9.61

Isoelectric Point (pI)

24.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LOR PF04525 25 - 184 3.3e-48 LURP-one-related
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 597
AcuI CTGAAG 1 cut(s) 550
AfaI GTAC 2 cut(s) 41, 217
AgsI TTSAA 5 cut(s) 121, 200, 307, 364, 386
AjnI CCWGG 1 cut(s) 508
AluBI AGCT 1 cut(s) 144
AluI AGCT 1 cut(s) 144
Alw26I GTCTC 1 cut(s) 594
Asp700I GAANNNNTTC 1 cut(s) 488
AsuHPI GGTGA 2 cut(s) 257, 379
BbsI GAAGAC 1 cut(s) 314
BccI CCATC 2 cut(s) 164, 222
BciT130I CCWGG 1 cut(s) 510
BciVI GTATCC 1 cut(s) 516
BcoDI GTCTC 1 cut(s) 594
BfmI CTRYAG 1 cut(s) 31
BfuI GTATCC 1 cut(s) 516
Bme1390I CCNGG 1 cut(s) 510
BmiI GGNNCC 1 cut(s) 592
BmrFI CCNGG 1 cut(s) 510
BpiI GAAGAC 1 cut(s) 314
BseBI CCWGG 1 cut(s) 510
BseGI GGATG 2 cut(s) 103, 546
BseMII CTCAG 1 cut(s) 203
BseYI CCCAGC 1 cut(s) 176
BsiSI CCGG 2 cut(s) 78, 594
BsmAI GTCTC 1 cut(s) 594
Bsp143I GATC 1 cut(s) 49
BspACI CCGC 1 cut(s) 597
BspCNI CTCAG 1 cut(s) 204
BspLI GGNNCC 1 cut(s) 592
BspMAI CTGCAG 1 cut(s) 35
BssMI GATC 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 510
Bst4CI ACNGT 3 cut(s) 115, 460, 502
Bst6I CTCTTC 1 cut(s) 201
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 2 cut(s) 163, 212
BstF5I GGATG 2 cut(s) 103, 546
BstKTI GATC 1 cut(s) 52
BstMAI GTCTC 1 cut(s) 594
BstMBI GATC 1 cut(s) 49
BstMWI GCNNNNNNNGC 1 cut(s) 451
BstNI CCWGG 1 cut(s) 510
BstSCI CCNGG 1 cut(s) 508
BstSFI CTRYAG 1 cut(s) 31
BstV2I GAAGAC 1 cut(s) 314
BsuI GTATCC 1 cut(s) 516
BtsCI GGATG 2 cut(s) 103, 546
BtsIMutI CAGTG 2 cut(s) 507, 574
Cac8I GCNNGC 1 cut(s) 146
Csp6I GTAC 2 cut(s) 40, 216
CviJI RGCY 2 cut(s) 21, 144
CviKI_1 RGCY 2 cut(s) 21, 144
CviQI GTAC 2 cut(s) 40, 216
DdeI CTNAG 2 cut(s) 163, 212
DpnI GATC 1 cut(s) 51
DpnII GATC 1 cut(s) 49
Eam1104I CTCTTC 1 cut(s) 201
EarI CTCTTC 1 cut(s) 201
Eco57I CTGAAG 1 cut(s) 550
EcoRII CCWGG 1 cut(s) 508
FaiI YATR 4 cut(s) 225, 240, 351, 403
FokI GGATG 2 cut(s) 110, 533
GsaI CCCAGC 1 cut(s) 180
HapII CCGG 2 cut(s) 78, 594
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HinfI GANTC 5 cut(s) 57, 159, 181, 257, 265
HpaII CCGG 2 cut(s) 78, 594
HphI GGTGA 2 cut(s) 257, 379
Hpy166II GTNNAC 3 cut(s) 152, 218, 517
Hpy188I TCNGA 1 cut(s) 65
Hpy8I GTNNAC 3 cut(s) 152, 218, 517
HpyAV CCTTC 1 cut(s) 364
HpyCH4III ACNGT 3 cut(s) 115, 460, 502
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 3 cut(s) 33, 319, 445
HpyF10VI GCNNNNNNNGC 1 cut(s) 451
HpyF3I CTNAG 2 cut(s) 163, 212
HpySE526I ACGT 1 cut(s) 321
Kzo9I GATC 1 cut(s) 49
LmnI GCTCC 1 cut(s) 131
MaeII ACGT 1 cut(s) 321
MaeIII GTNAC 3 cut(s) 190, 460, 496
MalI GATC 1 cut(s) 51
MboI GATC 1 cut(s) 49
MboII GAAGA 4 cut(s) 188, 282, 319, 493
MluCI AATT 3 cut(s) 314, 487, 583
MlyI GAGTC 1 cut(s) 168
MmeI TCCRAC 1 cut(s) 450
MnlI CCTC 2 cut(s) 33, 433
MroXI GAANNNNTTC 1 cut(s) 488
MseI TTAA 3 cut(s) 102, 282, 552
MspI CCGG 2 cut(s) 78, 594
MspR9I CCNGG 1 cut(s) 510
MvaI CCWGG 1 cut(s) 510
MwoI GCNNNNNNNGC 1 cut(s) 451
NdeII GATC 1 cut(s) 49
NlaIV GGNNCC 1 cut(s) 592
NmeAIII GCCGAG 1 cut(s) 182
NmuCI GTSAC 2 cut(s) 190, 496
PdmI GAANNNNTTC 1 cut(s) 488
PfeI GAWTC 4 cut(s) 57, 181, 257, 265
PleI GAGTC 1 cut(s) 167
PpsI GAGTC 1 cut(s) 167
Psp6I CCWGG 1 cut(s) 508
PspFI CCCAGC 1 cut(s) 176
PspGI CCWGG 1 cut(s) 508
PspN4I GGNNCC 1 cut(s) 592
PstI CTGCAG 1 cut(s) 35
RsaI GTAC 2 cut(s) 41, 217
RsaNI GTAC 2 cut(s) 40, 216
SaqAI TTAA 3 cut(s) 102, 282, 552
Sau3AI GATC 1 cut(s) 49
SchI GAGTC 1 cut(s) 168
ScrFI CCNGG 1 cut(s) 510
SetI ASST 4 cut(s) 146, 324, 369, 514
SfcI CTRYAG 1 cut(s) 31
Sse9I AATT 3 cut(s) 314, 487, 583
SsiI CCGC 1 cut(s) 597
StyD4I CCNGG 1 cut(s) 508
TaaI ACNGT 3 cut(s) 115, 460, 502
TaiI ACGT 1 cut(s) 324
TasI AATT 3 cut(s) 314, 487, 583
TatI WGTACW 1 cut(s) 215
TfiI GAWTC 4 cut(s) 57, 181, 257, 265
Tru1I TTAA 3 cut(s) 102, 282, 552
Tru9I TTAA 3 cut(s) 102, 282, 552
TscAI CASTG 2 cut(s) 507, 574
TseFI GTSAC 2 cut(s) 190, 496
Tsp45I GTSAC 2 cut(s) 190, 496
TspDTI ATGAA 1 cut(s) 535
TspGWI ACGGA 2 cut(s) 27, 269
TspRI CASTG 2 cut(s) 507, 574
XmnI GAANNNNTTC 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.