Rorug03G0112000

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
9050227 .. 9053619
3393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0112000.1

Sequence Viewer

Length: 3393 bp
ATGAGAATTCCATTGCTTCCATGGTTTTTCTTGATACCCTTTTGCTGTTTTGCACTGTTCCATACAATTGTGGTGTCTGGCCAATGCGACAGCAACCAGCAGCAATCTTTGCTGCTCCAATTGAAGAACAGCCTCAATTTTAACTCCACATTCTCCACAAAACTTGTGAAGTGGAATAATGCTTCGGATTACTGTCTTTGGGAAGGTGTCTCCTGCAACCAGACTTGTGTTACCCATCTTGACTTGAGCAATGAAACGATTTCGGGTGGACTTGATAATTCAAGTGCTCTTTTCAGTCTGCAATACATCGAGAACCTGAATTTGGCTTTTAATGACTTCAAAAAAAGCTTGATTCCATCGGAGATCAACAAGTTGACCAGTTTGAGTTATTTGAATCTGTCGAATGCTGGCTTTGCAGGGCAGATTCCGATTGAGATTTCGCACTTGAGAAGGTTGGTGTTTCTTGATTTATCTACTATTTATTTTCCTGGAATCCCTGCACTGCAACTTGAGCATCCAAATTTGAATTTGCTCATTGGAAACCTTTCGGAGATAGTTGAACTTCATCTTGATGGTGTGAACATATCAGCACAGAGAGCTCAGTGGTGTCAAGCAATATCATCTTCATTGCCAAAGTTGAGGGTGTTGAGCTTGTCCAGTTGTAATCTTTTGGGCCCTATTGATGTTTCATTGTTGAAGCTTCATTCACTCTCAGAAATTCGTATAGAGAGTAACAATTTGTCTACTCCAGTTCCAGAGTTCTTGTCAAATTTCACAAATTTGACTTCCTTACGCCTCATGAATTCAGGGTTATATGGTACATTCCCAAAGAAGATCTTCCTGGTACGTACACTGCAGATTATCGACTTAATTGGCAATCAAGAGCTACGAGGTTCGTTGCCAGACTTTCCGAAAAATGGAGCTCTTCAGTCCCTGTTCCTAGCCAGGACAGCTTTTTCAGGGTTATTGCCGGAATCTATTGGAAACCTCAAGATGTTGTCCAAAGTAGATCTTTCAAATTGCAGCTTCACGGGACCAATCCCAAAGTCAATGGAAAGCCTTACGGAATTGGTTTATGTGGACATGTCAGCGAACAAGCTTAATGGTTCAGTTCCGTTGTTGAGTATGGCCAAGAATCTGACGGACATAAATCTTTCTCACAATGAGCTAGAAGGTCTGATTAACTCTACTCACTGGCAAAATCTTACAAAACTGGTCAATCTCAACTTGGGTAACAATAAACTGGATGGCAGTATTCCATCGTCTCTATTTAATCTTCCCTCGCTGAAGCAACTACTGCTCTCCAACAATCAGTTCTCTGGTCAGTTGCTTGAATTTGTCAACATCTCTTCTAACCCTCTTGACACACTTGATTTGAGTAGCAACAACTTGGCAGGGCCGGTACCCAAGTCTATCTTCAATCTCCAACGGCTTAAAATTCTTTCACTTTCTTCAAACAACTTCAGTGGGTACTTCCCACTCAACAGTGTTCAACAGTTCAAAAATCTTTCGAGTCTTGATCTTTCATATAATAGTTTGTTGATTAGTTACAATAGCACCGATTCCTCGCAGTCTTCCTTTCCTCAGATTACCACATTGAAGTTGGCTTCAGGCAAGTTGAGAAAATTCCCTGATTTCTTGAGAAGCCAATCCAAACTAAGCACTTTAGATCTTTCACAAAACCAGATTCAGGGAGAGATACCCAACTGGATTTGGATGCTCAGTCTCAATCAGCTAAATCTTTCTTGCAATTCCCTGGTAACTCTAGAAGGTCCTTTATCCAATCCTGCCTCTAAGTTGACTGTGCTTGACCTTCATTCAAATCAGCTTCAGGGACAAGTCCCAATTTTTCCACCATTTGCCACTTATCTGGATTACTCAAGAAATAATTTCACCTCTAGCATACCGGCTGACATTGGTGATTTCCTTAATTTCACTGTTTTCTTGTCTCTTTCAAGCAACAAAATTGAGGGGAGCATTCCAGGATCAATATGCAATGCGTCATATCTTCAGGTTCTTGATCTGTCCAATAATTCTTTCAGTGGCTATATTCCCCAGTGCTTGACTGCAATAAGTGGAAATCTTGTAGTACTTAATTTAAGGAGAAACCAACTTGCTGGGACTCTTCCTGACAGATTTCCTGGCCATTGTAGTCTGAAAACTCTAGACTTCAATGGAAATCGTCTAGAAGGTCAGTTTCCAAAATCTCTAGCCAATTGCACATTGTTAGAAGTTCTGAACCTTGGAAACAATCAGATAACAGATACATTTCCATGCTTGTTGAAGAGCATCTCCACCTTGCGTGTCCTTGTTTTGCGATCAAACAGATTTTATAGACGCATTGGATGTCCCAACACCAATGGTACCTGGCCAATGCTTCAGATTGTTGACATAGCACACAACAACTTCAGTGGTCAAATACCGGGAAGACGCTTAACTACATGGAAGGCAATGATGGGCACCCAATCATCGATCAATCATCTGCAATTTCCTGTCTCTCAATTCAGTGATGAGCTAAATTATCAGGATGCTATAACAGTTACCACCAAAGGACTAGAGATGGAGTTGGTCAAGATTCTAACTGTTTTCACCTCTATTGACATCTCGTGCAACAATTTCAATGGATCAATACCGGCACAAGTGGGACAACTAAAAGCGCTCCATGGCCTCAACTTGTCCAACAATGCTCTCACAGGCCCTATCCCACCATCATTGAGTAACCTGACACAACTCGAGTCCTTGGACCTTTCAAAGAACAGCCTGAGCGGGCCAATTCCACCAAAGCTTACAGCGCTTACTTTCCTTTCATTCTTGAATCTCTCATATAATCAACTGGTGGGGAGGATACCAAGTGGATCTCAGTTTTCAACATTTGATTCAGCTTCCTTTGCAGGTAATAAGGGATTATGCGGGTCACCTTTACTGCTAAAATGCAGCAGTACCAGTGACTCACCAGGTGCAGCATCAAATGAAAAAGAGTCAGAAATTGGGTTTGATTGGCAGTCTATATATACTGGACTGGGATTTGGAGTCGGAGCAGGAGTGATTGTTATTCTGTTAATGTTGTGGGAGGAAGGAAGAAATTGGATGGACGACAGCATTGATAAAATTCTTCTGGTACTTCTTCCAATGATGGGATTCACTTACAAAACTCGTCATGAATGGGATGATGATGGGGAAGAAGATTATGAAGAAGATAGCATGTATTTCACAGGAGACTATGATCAAGATGAGATTGAATCAGAAGACAAAGGAATTCAGGGTCCATTTTGTGTGTTTTGTTCGAAACTGGATATCAGTAGGAAGAGTCCCATCCATAACCCAGATTGTACATGCCATTTGTCACCACCTATCTCATCTACTTCTTCCTCCTCGTCCTCGTTCTCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1130

Amino Acids

124.34

Weight (kDa)

5.56

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 73 3.1e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 454 - 513 1.4e-06 Leucine rich repeat
LRR_8 PF13855 694 - 753 9.2e-06 Leucine rich repeat
LRR_4 PF12799 718 - 756 4.6e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 864 - 921 7.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2882
Acc65I GGTACC 2 cut(s) 1402, 2363
AccB1I GGYRCC 3 cut(s) 1402, 2363, 2459
AccBSI CCGCTC 1 cut(s) 2766
AccI GTMKAC 1 cut(s) 743
AciI CCGC 2 cut(s) 2766, 2910
AclWI GGATC 3 cut(s) 1993, 2632, 2863
AcoI YGGCCR 4 cut(s) 79, 1128, 2143, 2369
AcuI CTGAAG 8 cut(s) 911, 1307, 1447, 1593, 1814, 1994, 2363, 2392
AdeI CACNNNGTG 1 cut(s) 2957
AfeI AGCGCT 2 cut(s) 2658, 2793
AfiI CCNNNNNNNGG 4 cut(s) 322, 917, 1690, 3134
AflIII ACRYGT 1 cut(s) 1083
AjnI CCWGG 8 cut(s) 487, 840, 944, 1755, 1981, 2140, 2366, 2953
AjuI GAANNNNNNNTTGG 8 cut(s) 305, 337, 1298, 1330, 1400, 1432, 2021, 2053
Alw21I GWGCWC 3 cut(s) 289, 601, 925
Alw26I GTCTC 6 cut(s) 214, 1269, 1730, 1953, 2500, 3210
AlwI GGATC 3 cut(s) 1993, 2632, 2863
AlwNI CAGNNNCTG 1 cut(s) 934
Ama87I CYCGRG 1 cut(s) 2732
Aor51HI AGCGCT 2 cut(s) 2658, 2793
AoxI GGCC 9 cut(s) 79, 673, 1128, 1397, 2143, 2369, 2665, 2695, 2768
ApaI GGGCCC 1 cut(s) 677
ApeKI GCWGC 5 cut(s) 100, 112, 1023, 2934, 2960
Asp700I GAANNNNTTC 2 cut(s) 544, 836
Asp718I GGTACC 2 cut(s) 1402, 2363
AspLEI GCGC 2 cut(s) 2659, 2794
AspS9I GGNCC 9 cut(s) 673, 674, 1034, 1397, 1772, 2696, 2743, 2768, 3263
AsuC2I CCSGG 1 cut(s) 2424
AsuHPI GGTGA 6 cut(s) 1885, 1931, 2581, 2907, 2943, 3336
AsuII TTCGAA 1 cut(s) 3284
AvaI CYCGRG 1 cut(s) 2732
AvaII GGWCC 4 cut(s) 1034, 1772, 2743, 3263
BaeGI GKGCMC 2 cut(s) 677, 2462
BaeI ACNNNNGTAYC 2 cut(s) 1394, 1427
BalI TGGCCA 4 cut(s) 81, 1130, 2145, 2371
BanI GGYRCC 3 cut(s) 1402, 2363, 2459
BanII GRGCYC 3 cut(s) 601, 677, 925
BauI CACGAG 1 cut(s) 2605
BbsI GAAGAC 3 cut(s) 1566, 2434, 3252
Bbv12I GWGCWC 3 cut(s) 289, 601, 925
BbvI GCAGC 5 cut(s) 99, 112, 1035, 2946, 2972
BceAI ACGGC 1 cut(s) 1445
BciT130I CCWGG 8 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2955
BciVI GTATCC 1 cut(s) 2838
BclI TGATCA 1 cut(s) 3223
BcnI CCSGG 1 cut(s) 2424
BcoDI GTCTC 6 cut(s) 214, 1269, 1730, 1953, 2500, 3210
BfaI CTAG 8 cut(s) 941, 1169, 1766, 1899, 2165, 2186, 2210, 2555
BfmI CTRYAG 1 cut(s) 854
BfoI RGCGCY 2 cut(s) 2660, 2795
BfuAI ACCTGC 1 cut(s) 2882
BfuI GTATCC 1 cut(s) 2838
BglII AGATCT 3 cut(s) 834, 1009, 1669
BisI GCNGC 5 cut(s) 101, 113, 1024, 2935, 2961
BlsI GCNGC 5 cut(s) 102, 114, 1025, 2936, 2962
BmcAI AGTACT 1 cut(s) 2091
Bme1390I CCNGG 9 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2424, 2955
Bme18I GGWCC 4 cut(s) 1034, 1772, 2743, 3263
BmeT110I CYCGRG 1 cut(s) 2732
BmgT120I GGNCC 9 cut(s) 673, 674, 1034, 1397, 1772, 2696, 2743, 2768, 3263
BmiI GGNNCC 6 cut(s) 675, 1035, 1404, 2365, 2461, 3264
BmrFI CCNGG 9 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2424, 2955
BmrI ACTGGG 2 cut(s) 2050, 3029
BmsI GCATC 5 cut(s) 523, 1707, 2298, 2518, 2972
BmuI ACTGGG 2 cut(s) 2050, 3029
BpiI GAAGAC 3 cut(s) 1566, 2434, 3252
BpmI CTGGAG 1 cut(s) 732
Bpu10I CCTNAGC 1 cut(s) 2762
Bpu14I TTCGAA 1 cut(s) 3284
BpuEI CTTGAG 6 cut(s) 265, 466, 530, 974, 1660, 1864
BpuMI CCSGG 1 cut(s) 2424
Bsa29I ATCGAT 1 cut(s) 2471
BsaAI YACGTR 1 cut(s) 848
BsaJI CCNNGG 5 cut(s) 20, 1755, 2242, 2662, 2739
BsaXI ACNNNNNCTCC 4 cut(s) 3027, 3033, 3057, 3063
Bsc4I CCNNNNNNNGG 4 cut(s) 322, 917, 1690, 3134
Bse118I RCCGGY 3 cut(s) 1399, 1906, 2632
Bse3DI GCAATG 5 cut(s) 11, 256, 626, 2002, 2457
BseBI CCWGG 8 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2955
BseCI ATCGAT 1 cut(s) 2471
BseDI CCNNGG 5 cut(s) 20, 1755, 2242, 2662, 2739
BseGI GGATG 8 cut(s) 514, 1252, 1722, 2351, 2533, 3093, 3172, 3312
BseLI CCNNNNNNNGG 4 cut(s) 322, 917, 1690, 3134
BseMI GCAATG 5 cut(s) 11, 256, 626, 2002, 2457
BseMII CTCAG 6 cut(s) 614, 726, 1598, 1735, 2753, 2873
BseRI GAGGAG 1 cut(s) 3361
BseSI GKGCMC 2 cut(s) 677, 2462
BseXI GCAGC 5 cut(s) 99, 112, 1035, 2946, 2972
BseYI CCCAGC 1 cut(s) 2117
BsgI GTGCAG 2 cut(s) 483, 2979
BshFI GGCC 9 cut(s) 81, 675, 1130, 1399, 2145, 2371, 2667, 2697, 2770
BshNI GGYRCC 3 cut(s) 1402, 2363, 2459
BshVI ATCGAT 1 cut(s) 2471
BsiHKAI GWGCWC 3 cut(s) 289, 601, 925
BsiHKCI CYCGRG 1 cut(s) 2732
BsiSI CCGG 5 cut(s) 971, 1400, 1907, 2423, 2633
BslFI GGGAC 8 cut(s) 916, 1047, 1826, 1848, 2134, 2334, 2658, 3294
BslI CCNNNNNNNGG 4 cut(s) 322, 917, 1690, 3134
BsmAI GTCTC 6 cut(s) 214, 1269, 1730, 1953, 2500, 3210
BsmBI CGTCTC 1 cut(s) 1269
BsmFI GGGAC 8 cut(s) 916, 1047, 1826, 1848, 2134, 2334, 2658, 3294
BsmI GAATGC 2 cut(s) 409, 1977
BsnI GGCC 9 cut(s) 81, 675, 1130, 1399, 2145, 2371, 2667, 2697, 2770
BsoBI CYCGRG 1 cut(s) 2732
Bsp119I TTCGAA 1 cut(s) 3284
Bsp120I GGGCCC 1 cut(s) 673
Bsp1286I GDGCHC 5 cut(s) 289, 601, 677, 925, 2462
Bsp1407I TGTACA 1 cut(s) 3329
Bsp19I CCATGG 2 cut(s) 20, 2662
BspACI CCGC 2 cut(s) 2766, 2910
BspANI GGCC 9 cut(s) 81, 675, 1130, 1399, 2145, 2371, 2667, 2697, 2770
BspCNI CTCAG 6 cut(s) 613, 725, 1597, 1734, 2754, 2872
BspDI ATCGAT 1 cut(s) 2471
BspHI TCATGA 2 cut(s) 798, 3157
BspLI GGNNCC 6 cut(s) 675, 1035, 1404, 2365, 2461, 3264
BspMAI CTGCAG 1 cut(s) 858
BspMI ACCTGC 1 cut(s) 2882
BspPI GGATC 3 cut(s) 1993, 2632, 2863
BspQI GCTCTTC 2 cut(s) 930, 2279
BspT104I TTCGAA 1 cut(s) 3284
BspT107I GGYRCC 3 cut(s) 1402, 2363, 2459
BsrBI CCGCTC 1 cut(s) 2766
BsrDI GCAATG 5 cut(s) 11, 256, 626, 2002, 2457
BsrFI RCCGGY 3 cut(s) 1399, 1906, 2632
BsrGI TGTACA 1 cut(s) 3329
BssAI RCCGGY 3 cut(s) 1399, 1906, 2632
BssECI CCNNGG 5 cut(s) 20, 1755, 2242, 2662, 2739
BssSI CACGAG 1 cut(s) 2605
BssT1I CCWWGG 4 cut(s) 20, 2242, 2662, 2739
Bst2BI CACGAG 1 cut(s) 2605
Bst2UI CCWGG 8 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2955
Bst4CI ACNGT 8 cut(s) 57, 194, 1487, 1497, 1804, 1939, 2539, 2584
Bst6I CTCTTC 5 cut(s) 930, 1354, 2130, 2279, 3299
BstAPI GCANNNNNTGC 2 cut(s) 109, 1297
BstAUI TGTACA 1 cut(s) 3329
BstBAI YACGTR 1 cut(s) 848
BstBI TTCGAA 1 cut(s) 3284
BstC8I GCNNGC 2 cut(s) 409, 2768
BstDEI CTNAG 8 cut(s) 600, 712, 1584, 1658, 1721, 1794, 2762, 2859
BstDSI CCRYGG 2 cut(s) 20, 2662
BstEII GGTNACC 1 cut(s) 2913
BstF5I GGATG 8 cut(s) 514, 1252, 1722, 2351, 2533, 3093, 3172, 3312
BstH2I RGCGCY 2 cut(s) 2660, 2795
BstHHI GCGC 2 cut(s) 2659, 2794
BstMAI GTCTC 6 cut(s) 214, 1269, 1730, 1953, 2500, 3210
BstMWI GCNNNNNNNGC 8 cut(s) 109, 413, 511, 596, 950, 1297, 2791, 2888
BstNI CCWGG 8 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2955
BstNSI RCATGY 3 cut(s) 1087, 3205, 3336
BstPI GGTNACC 1 cut(s) 2913
BstSCI CCNGG 9 cut(s) 487, 840, 944, 1755, 1981, 2140, 2366, 2422, 2953
BstSFI CTRYAG 1 cut(s) 854
BstSLI GKGCMC 2 cut(s) 677, 2462
BstSNI TACGTA 1 cut(s) 848
BstV1I GCAGC 5 cut(s) 99, 112, 1035, 2946, 2972
BstV2I GAAGAC 3 cut(s) 1566, 2434, 3252
BstX2I RGATCY 4 cut(s) 834, 1009, 1669, 2855
BstXI CCANNNNNNTGG 2 cut(s) 1870, 2117
BstYI RGATCY 4 cut(s) 834, 1009, 1669, 2855
Bsu15I ATCGAT 1 cut(s) 2471
BsuI GTATCC 1 cut(s) 2838
BsuRI GGCC 9 cut(s) 81, 675, 1130, 1399, 2145, 2371, 2667, 2697, 2770
BsuTUI ATCGAT 1 cut(s) 2471
BtgI CCRYGG 2 cut(s) 20, 2662
BtsCI GGATG 8 cut(s) 514, 1252, 1722, 2351, 2533, 3093, 3172, 3312
BtsI GCAGTG 2 cut(s) 500, 851
BveI ACCTGC 1 cut(s) 2882
Cac8I GCNNGC 2 cut(s) 409, 2768
CaiI CAGNNNCTG 1 cut(s) 934
CciI TCATGA 2 cut(s) 798, 3157
CfoI GCGC 2 cut(s) 2659, 2794
Cfr10I RCCGGY 3 cut(s) 1399, 1906, 2632
Cfr13I GGNCC 9 cut(s) 673, 674, 1034, 1397, 1772, 2696, 2743, 2768, 3263
ClaI ATCGAT 1 cut(s) 2471
CseI GACGC 3 cut(s) 1989, 2346, 2439
CsiI ACCWGGT 1 cut(s) 2953
CspCI CAANNNNNGTGG 8 cut(s) 145, 180, 1447, 1482, 2392, 2427, 2694, 2729
CviAII CATG 9 cut(s) 21, 799, 1084, 2274, 2442, 2663, 3158, 3202, 3333
DdeI CTNAG 8 cut(s) 600, 712, 1584, 1658, 1721, 1794, 2762, 2859
DraIII CACNNNGTG 1 cut(s) 2957
EaeI YGGCCR 4 cut(s) 79, 1128, 2143, 2369
Eam1104I CTCTTC 5 cut(s) 930, 1354, 2130, 2279, 3299
EarI CTCTTC 5 cut(s) 930, 1354, 2130, 2279, 3299
Ecl136II GAGCTC 2 cut(s) 599, 923
Eco105I TACGTA 1 cut(s) 848
Eco130I CCWWGG 4 cut(s) 20, 2242, 2662, 2739
Eco24I GRGCYC 3 cut(s) 601, 677, 925
Eco32I GATATC 1 cut(s) 3295
Eco47I GGWCC 4 cut(s) 1034, 1772, 2743, 3263
Eco47III AGCGCT 2 cut(s) 2658, 2793
Eco53kI GAGCTC 2 cut(s) 599, 923
Eco57I CTGAAG 8 cut(s) 911, 1307, 1447, 1593, 1814, 1994, 2363, 2392
Eco88I CYCGRG 1 cut(s) 2732
Eco91I GGTNACC 1 cut(s) 2913
EcoICRI GAGCTC 2 cut(s) 599, 923
EcoO109I RGGNCCY 3 cut(s) 674, 1772, 2696
EcoO65I GGTNACC 1 cut(s) 2913
EcoRI GAATTC 3 cut(s) 6, 802, 3255
EcoRII CCWGG 8 cut(s) 487, 840, 944, 1755, 1981, 2140, 2366, 2953
EcoRV GATATC 1 cut(s) 3295
EcoT14I CCWWGG 4 cut(s) 20, 2242, 2662, 2739
EcoT38I GRGCYC 3 cut(s) 601, 677, 925
ErhI CCWWGG 4 cut(s) 20, 2242, 2662, 2739
Esp3I CGTCTC 1 cut(s) 1269
FaeI CATG 9 cut(s) 24, 802, 1087, 2277, 2445, 2666, 3161, 3205, 3336
FalI AAGNNNNNCTT 6 cut(s) 821, 853, 996, 1028, 1400, 1432
FaqI GGGAC 8 cut(s) 916, 1047, 1826, 1848, 2134, 2334, 2658, 3294
FatI CATG 9 cut(s) 20, 798, 1083, 2273, 2441, 2662, 3157, 3201, 3332
FauI CCCGC 2 cut(s) 2759, 2903
FbaI TGATCA 1 cut(s) 3223
FblI GTMKAC 1 cut(s) 743
Fnu4HI GCNGC 5 cut(s) 101, 113, 1024, 2935, 2961
FokI GGATG 8 cut(s) 501, 1259, 1729, 2358, 2540, 3100, 3179, 3299
FriOI GRGCYC 3 cut(s) 601, 677, 925
Fsp4HI GCNGC 5 cut(s) 101, 113, 1024, 2935, 2961
FspBI CTAG 8 cut(s) 941, 1169, 1766, 1899, 2165, 2186, 2210, 2555
GlaI GCGC 2 cut(s) 2658, 2793
GluI GCNGC 5 cut(s) 101, 113, 1024, 2935, 2961
GsaI CCCAGC 1 cut(s) 2121
GsuI CTGGAG 1 cut(s) 732
HaeII RGCGCY 2 cut(s) 2660, 2795
HaeIII GGCC 9 cut(s) 81, 675, 1130, 1399, 2145, 2371, 2667, 2697, 2770
HapII CCGG 5 cut(s) 971, 1400, 1907, 2423, 2633
HgaI GACGC 3 cut(s) 1989, 2346, 2439
HhaI GCGC 2 cut(s) 2659, 2794
Hin1II CATG 9 cut(s) 24, 802, 1087, 2277, 2445, 2666, 3161, 3205, 3336
Hin6I GCGC 2 cut(s) 2657, 2792
HinP1I GCGC 2 cut(s) 2657, 2792
HincII GTYRAC 4 cut(s) 375, 1342, 1800, 2389
HindII GTYRAC 4 cut(s) 375, 1342, 1800, 2389
HindIII AAGCTT 4 cut(s) 346, 698, 1097, 2783
HpaII CCGG 5 cut(s) 971, 1400, 1907, 2423, 2633
HphI GGTGA 6 cut(s) 1885, 1931, 2581, 2907, 2943, 3336
Hpy166II GTNNAC 9 cut(s) 269, 375, 580, 744, 851, 1081, 1342, 1800, 2389
Hpy8I GTNNAC 9 cut(s) 269, 375, 580, 744, 851, 1081, 1342, 1800, 2389
HpyAV CCTTC 8 cut(s) 197, 444, 1166, 1763, 1823, 2183, 2440, 3068
HpyCH4III ACNGT 8 cut(s) 57, 194, 1487, 1497, 1804, 1939, 2539, 2584
HpyCH4IV ACGT 1 cut(s) 847
HpyF10VI GCNNNNNNNGC 8 cut(s) 109, 413, 511, 596, 950, 1297, 2791, 2888
HpyF3I CTNAG 8 cut(s) 600, 712, 1584, 1658, 1721, 1794, 2762, 2859
HpySE526I ACGT 1 cut(s) 847
Hsp92II CATG 9 cut(s) 24, 802, 1087, 2277, 2445, 2666, 3161, 3205, 3336
HspAI GCGC 2 cut(s) 2657, 2792
KpnI GGTACC 2 cut(s) 1406, 2367
Ksp22I TGATCA 1 cut(s) 3223
LguI GCTCTTC 2 cut(s) 930, 2279
LmnI GCTCC 5 cut(s) 120, 920, 1974, 2664, 3035
Lsp1109I GCAGC 5 cut(s) 99, 112, 1035, 2946, 2972
LweI GCATC 5 cut(s) 523, 1707, 2298, 2518, 2972
MabI ACCWGGT 1 cut(s) 2953
MaeI CTAG 8 cut(s) 941, 1169, 1766, 1899, 2165, 2186, 2210, 2555
MaeII ACGT 1 cut(s) 847
MbiI CCGCTC 1 cut(s) 2766
MfeI CAATTG 3 cut(s) 66, 119, 2215
MflI RGATCY 4 cut(s) 834, 1009, 1669, 2855
MhlI GDGCHC 5 cut(s) 289, 601, 677, 925, 2462
MlsI TGGCCA 4 cut(s) 81, 1130, 2145, 2371
MluNI TGGCCA 4 cut(s) 81, 1130, 2145, 2371
MlyI GAGTC 7 cut(s) 1522, 2116, 2744, 2942, 2987, 3039, 3316
MmeI TCCRAC 4 cut(s) 1329, 1450, 2703, 3013
Mox20I TGGCCA 4 cut(s) 81, 1130, 2145, 2371
MroXI GAANNNNTTC 2 cut(s) 544, 836
MscI TGGCCA 4 cut(s) 81, 1130, 2145, 2371
MslI CAYNNNNRTG 2 cut(s) 570, 2272
Msp20I TGGCCA 4 cut(s) 81, 1130, 2145, 2371
MspI CCGG 5 cut(s) 971, 1400, 1907, 2423, 2633
MspR9I CCNGG 9 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2424, 2955
MunI CAATTG 3 cut(s) 66, 119, 2215
Mva1269I GAATGC 2 cut(s) 409, 1977
MvaI CCWGG 8 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2955
MwoI GCNNNNNNNGC 8 cut(s) 109, 413, 511, 596, 950, 1297, 2791, 2888
NciI CCSGG 1 cut(s) 2424
NcoI CCATGG 2 cut(s) 20, 2662
NlaIII CATG 9 cut(s) 24, 802, 1087, 2277, 2445, 2666, 3161, 3205, 3336
NlaIV GGNNCC 6 cut(s) 675, 1035, 1404, 2365, 2461, 3264
NmuCI GTSAC 3 cut(s) 2913, 2945, 3342
NspI RCATGY 3 cut(s) 1087, 3205, 3336
NspV TTCGAA 1 cut(s) 3284
PaeR7I CTCGAG 1 cut(s) 2732
PagI TCATGA 2 cut(s) 798, 3157
PciI ACATGT 1 cut(s) 1083
PciSI GCTCTTC 2 cut(s) 930, 2279
PctI GAATGC 2 cut(s) 409, 1977
PdmI GAANNNNTTC 2 cut(s) 544, 836
PfoI TCCNGGA 2 cut(s) 487, 1981
PkrI GCNGC 5 cut(s) 102, 114, 1025, 2936, 2962
PleI GAGTC 7 cut(s) 1521, 2116, 2743, 2942, 2986, 3038, 3315
PpsI GAGTC 7 cut(s) 1521, 2116, 2743, 2942, 2986, 3038, 3315
Ppu21I YACGTR 1 cut(s) 848
PpuMI RGGWCCY 1 cut(s) 1772
PscI ACATGT 1 cut(s) 1083
Psp124BI GAGCTC 2 cut(s) 601, 925
Psp5II RGGWCCY 1 cut(s) 1772
Psp6I CCWGG 8 cut(s) 487, 840, 944, 1755, 1981, 2140, 2366, 2953
PspEI GGTNACC 1 cut(s) 2913
PspFI CCCAGC 1 cut(s) 2117
PspGI CCWGG 8 cut(s) 487, 840, 944, 1755, 1981, 2140, 2366, 2953
PspN4I GGNNCC 6 cut(s) 675, 1035, 1404, 2365, 2461, 3264
PspOMI GGGCCC 1 cut(s) 673
PspPI GGNCC 9 cut(s) 673, 674, 1034, 1397, 1772, 2696, 2743, 2768, 3263
PspPPI RGGWCCY 1 cut(s) 1772
PspXI VCTCGAGB 1 cut(s) 2732
PstI CTGCAG 1 cut(s) 858
PstNI CAGNNNCTG 1 cut(s) 934
PsuI RGATCY 4 cut(s) 834, 1009, 1669, 2855
RseI CAYNNNNRTG 2 cut(s) 570, 2272
SacI GAGCTC 2 cut(s) 601, 925
SapI GCTCTTC 2 cut(s) 930, 2279
SatI GCNGC 5 cut(s) 101, 113, 1024, 2935, 2961
Sau96I GGNCC 9 cut(s) 673, 674, 1034, 1397, 1772, 2696, 2743, 2768, 3263
ScaI AGTACT 1 cut(s) 2091
SchI GAGTC 7 cut(s) 1522, 2116, 2744, 2942, 2987, 3039, 3316
ScrFI CCNGG 9 cut(s) 489, 842, 946, 1757, 1983, 2142, 2368, 2424, 2955
SduI GDGCHC 5 cut(s) 289, 601, 677, 925, 2462
SexAI ACCWGGT 1 cut(s) 2953
SfaNI GCATC 5 cut(s) 523, 1707, 2298, 2518, 2972
SfcI CTRYAG 1 cut(s) 854
Sfr274I CTCGAG 1 cut(s) 2732
SfuI TTCGAA 1 cut(s) 3284
SinI GGWCC 4 cut(s) 1034, 1772, 2743, 3263
SlaI CTCGAG 1 cut(s) 2732
SmiMI CAYNNNNRTG 2 cut(s) 570, 2272
SmlI CTYRAG 7 cut(s) 244, 445, 509, 989, 1639, 1879, 2732
SmoI CTYRAG 7 cut(s) 244, 445, 509, 989, 1639, 1879, 2732
SnaBI TACGTA 1 cut(s) 848
SsiI CCGC 2 cut(s) 2766, 2910
SspMI CTAG 8 cut(s) 941, 1169, 1766, 1899, 2165, 2186, 2210, 2555
SstI GAGCTC 2 cut(s) 601, 925
StyD4I CCNGG 9 cut(s) 487, 840, 944, 1755, 1981, 2140, 2366, 2422, 2953
StyI CCWWGG 4 cut(s) 20, 2242, 2662, 2739
TaaI ACNGT 8 cut(s) 57, 194, 1487, 1497, 1804, 1939, 2539, 2584
TaiI ACGT 1 cut(s) 850
TaqI TCGA 7 cut(s) 309, 401, 864, 1511, 2471, 2733, 3284
TatI WGTACW 2 cut(s) 2089, 3329
TseFI GTSAC 3 cut(s) 2913, 2945, 3342
TseI GCWGC 5 cut(s) 100, 112, 1023, 2934, 2960
Tsp45I GTSAC 3 cut(s) 2913, 2945, 3342
TspGWI ACGGA 3 cut(s) 1079, 1104, 1157
VpaK11BI GGWCC 4 cut(s) 1034, 1772, 2743, 3263
XbaI TCTAGA 3 cut(s) 1765, 2164, 2185
XceI RCATGY 3 cut(s) 1087, 3205, 3336
XcmI CCANNNNNNNNNTGG 2 cut(s) 18, 1600
XhoI CTCGAG 1 cut(s) 2732
XmiI GTMKAC 1 cut(s) 743
XmnI GAANNNNTTC 2 cut(s) 544, 836
XspI CTAG 8 cut(s) 941, 1169, 1766, 1899, 2165, 2186, 2210, 2555
ZrmI AGTACT 1 cut(s) 2091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.