Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011908

Physical Location & Seq

Genomic Coordinates Forward (+)

1389979 .. 1393997

Gene Structure 4019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G04810.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGGATAATGGAGGGAGCGTGTTGTCGCTCTCTGCTCCACACTTCCCTTACTCCGCCACCATTCTCCGACGTCACTCTCCGGTGGCTTCCATATCTTTCTCCCTTAAGCAACCACCACCGCAACCACCAGAACCTCCTGAGAGTCCTCCTGACCTCCGCCGCCCGGAGAAATCTATTGGTTCTTCTTCATCTTCTTCCTCTCCTTCCCCTATCCCTTCTCCTAAAACCCCTCTTAAGATTAATCCACTCAAGGGTTTAACCAATCGCTCTTCTGTGTCTCCTCTTGTTCAATCAGAGGTTTCGAGTAAAGTTTCTTCCTTTGGCTCCTCTCTAGCATCCAAGCTACGTTTGTCCAGCAAGCTCTCTCCTCCTCCTCCTCCTCCACCTCCGCCTCCTGTTGAGGAAACCACCCAATTCCGAGATGAGTTTCGGAGTGACACGAAACCACCGGAAGAAGAAACTCGAAACCCGCAACAGGAATTCCGACAAGAAGGGAAGATATTCGTTGGTAATTTACCGACATGGATAAAGAAACCAGAGTTTGAAGAGTTCTTCCGACAGTTCGGACCGATAGAGAATGTGATTCTAATCAAAGGACATCACGAGGTCGAGAAAAACGCGGGATTTGGGTTCATTATTTACGCGGCAGAGAAGTCTGCAATGAAAGCTGTGGAGTTCGACGGCGTTGAGTTTCACGGCAGGATATTGACGGTGAAGCTAGACGACGGAAAGAGGCTGAAAACAAAGGCTGAACAGAGAGTGAGGTGGGTAGAGGAAGGAGAAGAAGACACGAAAATGTCTAATAAGTCGTCGTGGCATCAAGAGAGAGAAGGGTCTCGAAAGTCACTACAGAGGATTTTAGATACCAATGGAGATAACTGGCAAGCTGTTATTTCAGCTTTCGAGAAGATCAGCAAGCCTTCGAGGACAGAGTTTGGTTTGATGGTGAAGTTCTATGGAAGAAGAGGGGATATGCATCGTGCACGTGAGACTTTTGAGAGAATGCGCGCGAGGGGTATCACACCAACATCACGTATATACACAAGCCTTATTCACGCTTATGCAGTTGGTAGAGACATGGACGAAGCACTGTCTTGTGTTCGTAAAATGAAGGAAGAAGGAATTGAGATGAGTTTGGTGACTTATAGTGTAATCGTTGGAGGATTCTCTAAAGCGGGACATGCCGAAGCTGCAGATTACTGGTTTGACGAGGCCAAACGGATACACAAAACCCTTAATGCCAGTATATATGGAAAAATCATATATGCACACTGTCAGACGTGCAATATGGAGCGGGCAGAGGCATTGGTGAGGGAGATGGAAGAAGAAGGTATTGATGCTCCTATTGCTATCTACCACACCATGATGGATGGTTATACAATGGTCGCTGATGAGAAGAAAGGCTTAGTTGTTTTCAAAAGACTTAAGGAATGTGGATTTACTCCAACAGTTGTTACTTATGGGTGCCTCATTAATCTTTATACTAAGGTTGGAAAGATTTCAAAAGCCTTGGAAGTTAGTAGAGTGATGAAGGAAGAGGGCGTAAAGCATAATTTAAAGACTTATTCGATGATGATTAACGGATTTGTAAAACTAAAAGATTGGGCCAATGCGTTTGCTGTATTTGAAGATATGGTAAAAGAAGGCATGAAACCAGATGTTATACTATACAACAACATCATCTCAGCATTCTGCGGGATGGGTAACATGGATCGAGCGATCCAGACTGTTAAGGAGATGCAAAAGCTGAGGCATAGACCAACCACACGGACATTTATGCCTATCATACATGGATATGCGAAATCCGGAGACATGAGGAGATCACTAGAAGTTTTTGATATGATGAGACGATGTGGGTGTGTTCCAACCGTTCATACTTTCAATGGTTTGATTAATGGTTTAGTTGAGAAACGTCAGATGGAAAAGGCGGTTGAGATATTAGACGAGATGACATTGGCGGGTGTAAGTGCAAACGAACATACTTACACAAAGATCATGCAAGGCTATGCATCAGTCGGTGATACCGGAAAAGCCTTTGAGTATTTTACAAGGCTTCAAAACGAAGGTTTGGATGTTGACATTTTCACTTACGAGGCGTTACTTAAAGCTTGCTGCAAATCAGGAAGAATGCAGAGCGCATTAGCTGTCACGAAAGAAATGAGTGCACGGAATATCCCGCGCAATTCCTTCGTCTATAACATATTAATCGACGGATGGGCACGAAGAGGCGATGTATGGGAAGCCGCGGATTTGATACAGCAGATGAAAAAAGAAGGTGTTAAACCCGACATTCATACTTACACATCCTTCATTAGCGCTTGTTCTAAGGCCGGCGACATGAATAGAGCTACACAAACAATCGAAGAAATGGAAGCACTAGGTGTGAAACCTAACATCAAGACATACACGACCTTAATAAAAGGATGGGCGAGAGCATCTCTTCCAGAGAAAGCCTTAAGTTGCTACGAGGAAATGAAGGCGATGGGGATAAAACCCGACAAAGCTGTGTATCATTGCCTTCTGACTTCGCTTCTGTCGCGTGCTTCAATCGCAGAAGCTTACATTTACTCAGGAGTGATGACTATCTGCAAGGAAATGGTGGAGGCAGGCTTGATTGTTGATATGGGAACTGCGGTTCACTGGTCTAAATGTCTGTGTAAGATTGAAGCTTCAGGTGGTGAGCTCACTGAGACGTTGCAGAAGACTTTCCCACCTGATTGGAGCTCGCATCATCATCACCATGGCTTCTTAGATCAAGTTTCTGATGTTGACTCCGATGAAGATGATGTTGATGGTGAAGATGGTGAGGACGATGAAGATGTTAACTCTGTTTCGGATTTATTATCACCTTACAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 RRM_1

Protein Analysis

952

Amino Acids

106.74

Weight (kDa)

6.71

Isoelectric Point (pI)

46.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	167 - 236	1.6e-12	RNA recognition motif
TPR_24	PF23276	320 - 436	2.4e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	325 - 398	1.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	342 - 391	3.6e-09	PPR repeat family
PPR	PF01535	346 - 375	2.6e-06	PPR repeat
PPR_3	PF13812	347 - 389	9.9e-08	Pentatricopeptide repeat domain
PPR_3	PF13812	436 - 494	1.5e-08	Pentatricopeptide repeat domain
TPR_24	PF23276	471 - 579	8e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	482 - 531	7.7e-13	PPR repeat family
PPR_3	PF13812	484 - 530	5.1e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	496 - 623	7.3e-12	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	521 - 554	5.2e-07	PPR repeat family
PPR_3	PF13812	541 - 596	1.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	549 - 581	1.9e-08	PPR repeat
PPR_2	PF13041	552 - 592	1.4e-08	PPR repeat family
PPR_2	PF13041	587 - 635	4.6e-11	PPR repeat family
TPR_24	PF23276	589 - 684	3.9e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	591 - 633	9.4e-07	Pentatricopeptide repeat domain
PPR_long	PF17177	600 - 735	3.1e-13	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	619 - 651	6.4e-07	PPR repeat
PPR_2	PF13041	622 - 670	3.8e-12	PPR repeat family
PPR_3	PF13812	646 - 705	4.2e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	661 - 706	2e-08	PPR repeat family
PPR_2	PF13041	693 - 740	1.9e-11	PPR repeat family
PPR_3	PF13812	716 - 775	6.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	724 - 756	4.2e-06	PPR repeat
PPR_2	PF13041	728 - 776	1.4e-14	PPR repeat family
PPR	PF01535	731 - 760	5.4e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011908)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04810 AT5G04810
fragaria_vesca	FvH4_7g06690
malus_domestica	MD07G1061700.v1.1
prunus_persica	Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1
pyrus_communis	pycom07g04720
rosa_chinensis	RchiOBHm_Chr1g0336351
rosa_laevigata	RLG00000029372
rosa_multiflora	Rmu_sc0005261.1_g000013 Rmu_sc0005480.1_g000007
rosa_roxburghii	Rroxscaffold_4G00315730
rosa_rugosa	Rorug01G0125300
rosa_samantha	Rh1AG144500 Rh1BG114100 Rh1CG136000 Rh1DG151200
rosa_wichuraiana	Rw1G011840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	73
AccB1I	GGYRCC	1 cut(s)	1464
AccBSI	CCGCTC	1 cut(s)	1294
AccII	CGCG	7 cut(s)	620, 644, 1008, 1010, 2179, 2246, 2539
AccIII	TCCGGA	1 cut(s)	1805
AclWI	GGATC	2 cut(s)	1714, 1719
AcsI	RAATTY	1 cut(s)	479
AcuI	CTGAAG	1 cut(s)	2655
AcvI	CACGTG	1 cut(s)	986
AcyI	GRCGYC	1 cut(s)	70
AdeI	CACNNNGTG	1 cut(s)	2381
AfeI	AGCGCT	1 cut(s)	2317
AfiI	CCNNNNNNNGG	3 cut(s)	163, 251, 475
AflII	CTTAAG	4 cut(s)	104, 233, 1424, 2455
AgsI	TTSAA	9 cut(s)	290, 545, 1417, 1503, 1628, 1882, 2057, 2547, 2666
AjiI	CACGTC	1 cut(s)	1281
AloI	GAACNNNNNNTCC	2 cut(s)	2619, 2651
Alw21I	GWGCWC	4 cut(s)	985, 2167, 2685, 2726
Alw26I	GTCTC	7 cut(s)	282, 840, 983, 1068, 1803, 1840, 2684
Alw44I	GTGCAC	2 cut(s)	981, 2163
AlwI	GGATC	2 cut(s)	1714, 1719
Aor13HI	TCCGGA	1 cut(s)	1805
Aor51HI	AGCGCT	1 cut(s)	2317
AoxI	GGCC	3 cut(s)	1212, 1605, 2328
ApaLI	GTGCAC	2 cut(s)	981, 2163
ApeKI	GCWGC	2 cut(s)	1190, 2112
ApoI	RAATTY	1 cut(s)	479
AseI	ATTAAT	4 cut(s)	240, 1473, 1893, 2204
Asp700I	GAANNNNTTC	3 cut(s)	500, 1498, 2705
AspLEI	GCGC	5 cut(s)	1008, 1010, 2138, 2181, 2318
AspS9I	GGNCC	2 cut(s)	566, 1605
AsuC2I	CCSGG	1 cut(s)	164
AvaII	GGWCC	1 cut(s)	566
BaeGI	GKGCMC	3 cut(s)	985, 2167, 2221
BanI	GGYRCC	1 cut(s)	1464
BanII	GRGCYC	2 cut(s)	2685, 2726
BarI	GAAGNNNNNNTAC	2 cut(s)	298, 330
BauI	CACGAG	1 cut(s)	602
BbrPI	CACGTG	1 cut(s)	986
BbsI	GAAGAC	2 cut(s)	792, 2708
Bbv12I	GWGCWC	4 cut(s)	985, 2167, 2685, 2726
BbvCI	CCTCAGC	1 cut(s)	1748
BbvI	GCAGC	2 cut(s)	1177, 2099
BceAI	ACGGC	2 cut(s)	697, 712
BcgI	CGANNNNNNTGC	2 cut(s)	2170, 2204
BciVI	GTATCC	1 cut(s)	1215
BcnI	CCSGG	1 cut(s)	164
BcoDI	GTCTC	7 cut(s)	282, 840, 983, 1068, 1803, 1840, 2684
BfaI	CTAG	4 cut(s)	332, 719, 1826, 2378
BfmI	CTRYAG	2 cut(s)	848, 1191
BfoI	RGCGCY	1 cut(s)	2319
BfrI	CTTAAG	4 cut(s)	104, 233, 1424, 2455
BfuI	GTATCC	1 cut(s)	1215
BisI	GCNGC	5 cut(s)	160, 645, 1191, 2113, 2244
BlsI	GCNGC	5 cut(s)	161, 646, 1192, 2114, 2245
Bme1390I	CCNGG	1 cut(s)	164
Bme18I	GGWCC	1 cut(s)	566
BmgBI	CACGTC	1 cut(s)	1281
BmgT120I	GGNCC	2 cut(s)	566, 1605
BmiI	GGNNCC	2 cut(s)	325, 1466
BmrFI	CCNGG	1 cut(s)	164
BmsI	GCATC	8 cut(s)	344, 826, 985, 1327, 1728, 2018, 2444, 2737
BpiI	GAAGAC	2 cut(s)	792, 2708
BplI	GAGNNNNNCTC	2 cut(s)	2422, 2454
Bpu10I	CCTNAGC	1 cut(s)	1748
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	1 cut(s)	164
BsaAI	YACGTR	2 cut(s)	986, 1034
BsaBI	GATNNNNATC	3 cut(s)	587, 975, 2582
BsaHI	GRCGYC	1 cut(s)	70
BsaI	GGTCTC	1 cut(s)	840
BsaJI	CCNNGG	3 cut(s)	1509, 2244, 2740
BsaWI	WCCGGW	4 cut(s)	79, 448, 1805, 2024
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	3 cut(s)	163, 251, 475
Bse118I	RCCGGY	1 cut(s)	2330
Bse1I	ACTGG	4 cut(s)	884, 1205, 1242, 2645
Bse3DI	GCAATG	2 cut(s)	666, 2512
Bse8I	GATNNNNATC	3 cut(s)	587, 975, 2582
BseAI	TCCGGA	1 cut(s)	1805
BseDI	CCNNGG	3 cut(s)	1509, 2244, 2740
BseGI	GGATG	7 cut(s)	335, 1375, 1704, 2077, 2219, 2303, 2429
BseJI	GATNNNNATC	3 cut(s)	587, 975, 2582
BseLI	CCNNNNNNNGG	3 cut(s)	163, 251, 475
BseMI	GCAATG	2 cut(s)	666, 2512
BseMII	CTCAG	5 cut(s)	129, 1698, 1739, 2583, 2679
BseNI	ACTGG	4 cut(s)	884, 1205, 1242, 2645
BsePI	GCGCGC	1 cut(s)	1006
BseRI	GAGGAG	8 cut(s)	270, 316, 357, 360, 363, 366, 369, 1831
BseSI	GKGCMC	3 cut(s)	985, 2167, 2221
BseXI	GCAGC	2 cut(s)	1177, 2099
Bsh1236I	CGCG	7 cut(s)	620, 644, 1008, 1010, 2179, 2246, 2539
BshFI	GGCC	3 cut(s)	1214, 1607, 2330
BshNI	GGYRCC	1 cut(s)	1464
BsiHKAI	GWGCWC	4 cut(s)	985, 2167, 2685, 2726
BsiSI	CCGG	6 cut(s)	80, 164, 449, 1806, 2025, 2331
BslFI	GGGAC	1 cut(s)	1191
BslI	CCNNNNNNNGG	3 cut(s)	163, 251, 475
BsmAI	GTCTC	7 cut(s)	282, 840, 983, 1068, 1803, 1840, 2684
BsmBI	CGTCTC	2 cut(s)	1840, 2684
BsmFI	GGGAC	1 cut(s)	1191
BsmI	GAATGC	3 cut(s)	1008, 1688, 2133
BsnI	GGCC	3 cut(s)	1214, 1607, 2330
Bso31I	GGTCTC	1 cut(s)	840
Bsp1286I	GDGCHC	5 cut(s)	985, 2167, 2221, 2685, 2726
Bsp13I	TCCGGA	1 cut(s)	1805
Bsp143I	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
Bsp19I	CCATGG	1 cut(s)	2740
BspANI	GGCC	3 cut(s)	1214, 1607, 2330
BspCNI	CTCAG	5 cut(s)	130, 1697, 1740, 2582, 2680
BspEI	TCCGGA	1 cut(s)	1805
BspFNI	CGCG	7 cut(s)	620, 644, 1008, 1010, 2179, 2246, 2539
BspLI	GGNNCC	2 cut(s)	325, 1466
BspMAI	CTGCAG	1 cut(s)	1195
BspPI	GGATC	2 cut(s)	1714, 1719
BspQI	GCTCTTC	1 cut(s)	274
BspT107I	GGYRCC	1 cut(s)	1464
BspTI	CTTAAG	4 cut(s)	104, 233, 1424, 2455
BspTNI	GGTCTC	1 cut(s)	840
BsrBI	CCGCTC	1 cut(s)	1294
BsrDI	GCAATG	2 cut(s)	666, 2512
BsrFI	RCCGGY	1 cut(s)	2330
BsrI	ACTGG	4 cut(s)	884, 1205, 1242, 2645
BssAI	RCCGGY	1 cut(s)	2330
BssECI	CCNNGG	3 cut(s)	1509, 2244, 2740
BssHII	GCGCGC	1 cut(s)	1006
BssMI	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
BssNI	GRCGYC	1 cut(s)	70
BssSI	CACGAG	1 cut(s)	602
BssT1I	CCWWGG	2 cut(s)	1509, 2740
Bst2BI	CACGAG	1 cut(s)	602
Bst4CI	ACNGT	7 cut(s)	561, 712, 1092, 1274, 1450, 1729, 1870
Bst6I	CTCTTC	6 cut(s)	274, 540, 958, 1530, 2218, 2445
BstACI	GRCGYC	1 cut(s)	70
BstAFI	CTTAAG	4 cut(s)	104, 233, 1424, 2455
BstBAI	YACGTR	2 cut(s)	986, 1034
BstDEI	CTNAG	9 cut(s)	138, 1405, 1485, 1684, 1748, 2325, 2569, 2688, 2749
BstDSI	CCRYGG	2 cut(s)	2244, 2740
BstF5I	GGATG	7 cut(s)	335, 1375, 1704, 2077, 2219, 2303, 2429
BstFNI	CGCG	7 cut(s)	620, 644, 1008, 1010, 2179, 2246, 2539
BstH2I	RGCGCY	1 cut(s)	2319
BstHHI	GCGC	5 cut(s)	1008, 1010, 2138, 2181, 2318
BstKTI	GATC	6 cut(s)	912, 1714, 1722, 1823, 1995, 2755
BstMAI	GTCTC	7 cut(s)	282, 840, 983, 1068, 1803, 1840, 2684
BstMBI	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
BstMWI	GCNNNNNNNGC	6 cut(s)	665, 1181, 1190, 1346, 2536, 2549
BstNSI	RCATGY	1 cut(s)	1184
BstSCI	CCNGG	1 cut(s)	162
BstSFI	CTRYAG	2 cut(s)	848, 1191
BstSLI	GKGCMC	3 cut(s)	985, 2167, 2221
BstUI	CGCG	7 cut(s)	620, 644, 1008, 1010, 2179, 2246, 2539
BstV1I	GCAGC	2 cut(s)	1177, 2099
BstV2I	GAAGAC	2 cut(s)	792, 2708
BstXI	CCANNNNNNTGG	1 cut(s)	2718
BsuI	GTATCC	1 cut(s)	1215
BsuRI	GGCC	3 cut(s)	1214, 1607, 2330
BtgI	CCRYGG	2 cut(s)	2244, 2740
BtgZI	GCGATG	2 cut(s)	2244, 2495
BtrI	CACGTC	1 cut(s)	1281
BtsCI	GGATG	7 cut(s)	335, 1375, 1704, 2077, 2219, 2303, 2429
BtsIMutI	CAGTG	4 cut(s)	1088, 1270, 2638, 2685
CfoI	GCGC	5 cut(s)	1008, 1010, 2138, 2181, 2318
Cfr10I	RCCGGY	1 cut(s)	2330
Cfr13I	GGNCC	2 cut(s)	566, 1605
Cfr42I	CCGCGG	1 cut(s)	2247
CpoI	CGGWCCG	1 cut(s)	566
CspI	CGGWCCG	1 cut(s)	566
DdeI	CTNAG	9 cut(s)	138, 1405, 1485, 1684, 1748, 2325, 2569, 2688, 2749
DpnI	GATC	6 cut(s)	911, 1713, 1721, 1822, 1994, 2754
DpnII	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
DraI	TTTAAA	1 cut(s)	1557
DraIII	CACNNNGTG	1 cut(s)	2381
Eam1104I	CTCTTC	6 cut(s)	274, 540, 958, 1530, 2218, 2445
EarI	CTCTTC	6 cut(s)	274, 540, 958, 1530, 2218, 2445
EciI	GGCGGA	3 cut(s)	43, 146, 378
Ecl136II	GAGCTC	2 cut(s)	2683, 2724
Eco130I	CCWWGG	2 cut(s)	1509, 2740
Eco24I	GRGCYC	2 cut(s)	2685, 2726
Eco31I	GGTCTC	1 cut(s)	840
Eco47I	GGWCC	1 cut(s)	566
Eco47III	AGCGCT	1 cut(s)	2317
Eco53kI	GAGCTC	2 cut(s)	2683, 2724
Eco57I	CTGAAG	1 cut(s)	2655
Eco72I	CACGTG	1 cut(s)	986
EcoICRI	GAGCTC	2 cut(s)	2683, 2724
EcoRI	GAATTC	1 cut(s)	479
EcoT14I	CCWWGG	2 cut(s)	1509, 2740
EcoT22I	ATGCAT	2 cut(s)	978, 2011
EcoT38I	GRGCYC	2 cut(s)	2685, 2726
ErhI	CCWWGG	2 cut(s)	1509, 2740
Esp3I	CGTCTC	2 cut(s)	1840, 2684
FalI	AAGNNNNNCTT	2 cut(s)	1388, 1420
FaqI	GGGAC	1 cut(s)	1191
FauI	CCCGC	7 cut(s)	477, 613, 1168, 1287, 1688, 1951, 2184
Fnu4HI	GCNGC	5 cut(s)	160, 645, 1191, 2113, 2244
FokI	GGATG	7 cut(s)	322, 1382, 1711, 2084, 2226, 2290, 2436
FriOI	GRGCYC	2 cut(s)	2685, 2726
Fsp4HI	GCNGC	5 cut(s)	160, 645, 1191, 2113, 2244
FspBI	CTAG	4 cut(s)	332, 719, 1826, 2378
GlaI	GCGC	5 cut(s)	1007, 1009, 2137, 2180, 2317
GluI	GCNGC	5 cut(s)	160, 645, 1191, 2113, 2244
HaeII	RGCGCY	1 cut(s)	2319
HaeIII	GGCC	3 cut(s)	1214, 1607, 2330
HapII	CCGG	6 cut(s)	80, 164, 449, 1806, 2025, 2331
HhaI	GCGC	5 cut(s)	1008, 1010, 2138, 2181, 2318
Hin1I	GRCGYC	1 cut(s)	70
Hin6I	GCGC	5 cut(s)	1006, 1008, 2136, 2179, 2316
HinP1I	GCGC	5 cut(s)	1006, 1008, 2136, 2179, 2316
HincII	GTYRAC	3 cut(s)	2077, 2770, 2824
HindII	GTYRAC	3 cut(s)	2077, 2770, 2824
HindIII	AAGCTT	3 cut(s)	2106, 2556, 2667
HinfI	GANTC	4 cut(s)	142, 583, 1164, 2771
HpaI	GTTAAC	1 cut(s)	2824
HpaII	CCGG	6 cut(s)	80, 164, 449, 1806, 2025, 2331
Hpy166II	GTNNAC	6 cut(s)	983, 2077, 2165, 2638, 2770, 2824
Hpy8I	GTNNAC	6 cut(s)	983, 2077, 2165, 2638, 2770, 2824
Hpy99I	CGWCG	5 cut(s)	72, 683, 728, 814, 2213
HpyCH4III	ACNGT	7 cut(s)	561, 712, 1092, 1274, 1450, 1729, 1870
HpyCH4IV	ACGT	7 cut(s)	70, 346, 985, 1033, 1280, 1912, 2693
HpyF10VI	GCNNNNNNNGC	6 cut(s)	665, 1181, 1190, 1346, 2536, 2549
HpyF3I	CTNAG	9 cut(s)	138, 1405, 1485, 1684, 1748, 2325, 2569, 2688, 2749
HpySE526I	ACGT	7 cut(s)	70, 346, 985, 1033, 1280, 1912, 2693
Hsp92I	GRCGYC	1 cut(s)	70
HspAI	GCGC	5 cut(s)	1006, 1008, 2136, 2179, 2316
Kpn2I	TCCGGA	1 cut(s)	1805
KroI	GCCGGC	1 cut(s)	2330
KroNI	GCCGGC	1 cut(s)	2332
KspAI	GTTAAC	1 cut(s)	2824
KspI	CCGCGG	1 cut(s)	2247
Kzo9I	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
LguI	GCTCTTC	1 cut(s)	274
LmnI	GCTCC	6 cut(s)	15, 40, 329, 1291, 1345, 2721
Lsp1109I	GCAGC	2 cut(s)	1177, 2099
LweI	GCATC	8 cut(s)	344, 826, 985, 1327, 1728, 2018, 2444, 2737
MaeI	CTAG	4 cut(s)	332, 719, 1826, 2378
MaeII	ACGT	7 cut(s)	70, 346, 985, 1033, 1280, 1912, 2693
MaeIII	GTNAC	8 cut(s)	71, 434, 843, 1138, 1453, 1703, 2097, 2146
MalI	GATC	6 cut(s)	911, 1713, 1721, 1822, 1994, 2754
MbiI	CCGCTC	1 cut(s)	1294
MboI	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
MhlI	GDGCHC	5 cut(s)	985, 2167, 2221, 2685, 2726
MluCI	AATT	6 cut(s)	413, 479, 511, 1122, 1552, 2182
MlyI	GAGTC	2 cut(s)	151, 2765
MmeI	TCCRAC	7 cut(s)	91, 508, 580, 1138, 1469, 1471, 1889
Mph1103I	ATGCAT	2 cut(s)	978, 2011
MroI	TCCGGA	1 cut(s)	1805
MroNI	GCCGGC	1 cut(s)	2330
MroXI	GAANNNNTTC	3 cut(s)	500, 1498, 2705
MslI	CAYNNNNRTG	5 cut(s)	794, 1059, 1364, 1794, 2739
MspA1I	CMGCKG	1 cut(s)	2246
MspCI	CTTAAG	4 cut(s)	104, 233, 1424, 2455
MspI	CCGG	6 cut(s)	80, 164, 449, 1806, 2025, 2331
MspR9I	CCNGG	1 cut(s)	164
Mva1269I	GAATGC	3 cut(s)	1008, 1688, 2133
MvnI	CGCG	7 cut(s)	620, 644, 1008, 1010, 2179, 2246, 2539
MwoI	GCNNNNNNNGC	6 cut(s)	665, 1181, 1190, 1346, 2536, 2549
NaeI	GCCGGC	1 cut(s)	2332
NciI	CCSGG	1 cut(s)	164
NcoI	CCATGG	1 cut(s)	2740
NdeII	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
NgoMIV	GCCGGC	1 cut(s)	2330
NlaIV	GGNNCC	2 cut(s)	325, 1466
NmuCI	GTSAC	5 cut(s)	71, 434, 843, 1138, 2146
NsiI	ATGCAT	2 cut(s)	978, 2011
NspI	RCATGY	1 cut(s)	1184
PauI	GCGCGC	1 cut(s)	1006
PciSI	GCTCTTC	1 cut(s)	274
PctI	GAATGC	3 cut(s)	1008, 1688, 2133
PdiI	GCCGGC	1 cut(s)	2332
PdmI	GAANNNNTTC	3 cut(s)	500, 1498, 2705
PfeI	GAWTC	2 cut(s)	583, 1164
PkrI	GCNGC	5 cut(s)	161, 646, 1192, 2114, 2245
PleI	GAGTC	2 cut(s)	150, 2765
PmaCI	CACGTG	1 cut(s)	986
PmlI	CACGTG	1 cut(s)	986
PpsI	GAGTC	2 cut(s)	150, 2765
Ppu21I	YACGTR	2 cut(s)	986, 1034
PshBI	ATTAAT	4 cut(s)	240, 1473, 1893, 2204
Psp124BI	GAGCTC	2 cut(s)	2685, 2726
PspCI	CACGTG	1 cut(s)	986
PspN4I	GGNNCC	2 cut(s)	325, 1466
PspPI	GGNCC	2 cut(s)	566, 1605
PstI	CTGCAG	1 cut(s)	1195
PteI	GCGCGC	1 cut(s)	1006
RseI	CAYNNNNRTG	5 cut(s)	794, 1059, 1364, 1794, 2739
Rsr2I	CGGWCCG	1 cut(s)	566
RsrII	CGGWCCG	1 cut(s)	566
SacI	GAGCTC	2 cut(s)	2685, 2726
SacII	CCGCGG	1 cut(s)	2247
SapI	GCTCTTC	1 cut(s)	274
SatI	GCNGC	5 cut(s)	160, 645, 1191, 2113, 2244
Sau3AI	GATC	6 cut(s)	909, 1711, 1719, 1820, 1992, 2752
Sau96I	GGNCC	2 cut(s)	566, 1605
SchI	GAGTC	2 cut(s)	151, 2765
ScrFI	CCNGG	1 cut(s)	164
SduI	GDGCHC	5 cut(s)	985, 2167, 2221, 2685, 2726
SfaNI	GCATC	8 cut(s)	344, 826, 985, 1327, 1728, 2018, 2444, 2737
SfcI	CTRYAG	2 cut(s)	848, 1191
Sfr303I	CCGCGG	1 cut(s)	2247
SgrBI	CCGCGG	1 cut(s)	2247
SinI	GGWCC	1 cut(s)	566
SmiMI	CAYNNNNRTG	5 cut(s)	794, 1059, 1364, 1794, 2739
SmlI	CTYRAG	5 cut(s)	104, 233, 248, 1424, 2455
SmoI	CTYRAG	5 cut(s)	104, 233, 248, 1424, 2455
Sse9I	AATT	6 cut(s)	413, 479, 511, 1122, 1552, 2182
SspMI	CTAG	4 cut(s)	332, 719, 1826, 2378
SstI	GAGCTC	2 cut(s)	2685, 2726
StyD4I	CCNGG	1 cut(s)	162
StyI	CCWWGG	2 cut(s)	1509, 2740
TaaI	ACNGT	7 cut(s)	561, 712, 1092, 1274, 1450, 1729, 1870
TaiI	ACGT	7 cut(s)	73, 349, 988, 1036, 1283, 1915, 2696
TaqII	GACCGA	1 cut(s)	583
TasI	AATT	6 cut(s)	413, 479, 511, 1122, 1552, 2182
TauI	GCSGC	3 cut(s)	162, 647, 2246
TfiI	GAWTC	2 cut(s)	583, 1164
TscAI	CASTG	4 cut(s)	1095, 1277, 2645, 2692
TseFI	GTSAC	5 cut(s)	71, 434, 843, 1138, 2146
TseI	GCWGC	2 cut(s)	1190, 2112
Tsp45I	GTSAC	5 cut(s)	71, 434, 843, 1138, 2146
TspGWI	ACGGA	6 cut(s)	741, 1234, 1596, 1783, 2182, 2226
TspRI	CASTG	4 cut(s)	1095, 1277, 2645, 2692
Vha464I	CTTAAG	4 cut(s)	104, 233, 1424, 2455
VneI	GTGCAC	2 cut(s)	981, 2163
VpaK11BI	GGWCC	1 cut(s)	566
VspI	ATTAAT	4 cut(s)	240, 1473, 1893, 2204
XapI	RAATTY	1 cut(s)	479
XceI	RCATGY	1 cut(s)	1184
XmnI	GAANNNNTTC	3 cut(s)	500, 1498, 2705
XspI	CTAG	4 cut(s)	332, 719, 1826, 2378
ZraI	GACGTC	1 cut(s)	71
Zsp2I	ATGCAT	2 cut(s)	978, 2011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.