pentatricopeptide repeat-containing protein At5g04810
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04810 AT5G04810 |
| fragaria_vesca | FvH4_7g06690 |
| malus_domestica | MD07G1061700.v1.1 |
| prunus_persica | Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1 |
| pyrus_communis | pycom07g04720 |
| rosa_chinensis | RchiOBHm_Chr1g0336351 |
| rosa_laevigata | RLG00000029372 |
| rosa_multiflora | Rmu_sc0005261.1_g000013 Rmu_sc0005480.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00315730 |
| rosa_rugosa | Rorug01G0125300 |
| rosa_samantha | Rh1AG144500 Rh1BG114100 Rh1CG136000 Rh1DG151200 |
| rosa_wichuraiana | Rw1G011840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1694 |
| Acc16I | TGCGCA | 1 cut(s) | 863 |
| AccBSI | CCGCTC | 3 cut(s) | 255, 340, 838 |
| AccI | GTMKAC | 2 cut(s) | 2520, 2769 |
| AccII | CGCG | 3 cut(s) | 850, 1308, 2443 |
| AclWI | GGATC | 1 cut(s) | 1311 |
| AcoI | YGGCCR | 1 cut(s) | 678 |
| AcsI | RAATTY | 7 cut(s) | 5, 151, 248, 469, 523, 2816, 2843 |
| AcuI | CTGAAG | 4 cut(s) | 1218, 1443, 2135, 2586 |
| AfaI | GTAC | 2 cut(s) | 800, 1052 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 639, 721, 938, 2067, 2461 |
| AjnI | CCWGG | 2 cut(s) | 1521, 2079 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2631, 2663 |
| Alw21I | GWGCWC | 3 cut(s) | 997, 1992, 2738 |
| Alw26I | GTCTC | 6 cut(s) | 64, 116, 399, 825, 1080, 1228 |
| AlwI | GGATC | 1 cut(s) | 1311 |
| Ama87I | CYCGRG | 2 cut(s) | 1838, 2581 |
| AoxI | GGCC | 7 cut(s) | 578, 678, 949, 1224, 2077, 2463, 2584 |
| ApaI | GGGCCC | 1 cut(s) | 582 |
| ApeKI | GCWGC | 6 cut(s) | 668, 1202, 1753, 2021, 2255, 2269 |
| ApoI | RAATTY | 7 cut(s) | 5, 151, 248, 469, 523, 2816, 2843 |
| AseI | ATTAAT | 2 cut(s) | 279, 2216 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 469, 1510, 2289, 2717 |
| AspLEI | GCGC | 3 cut(s) | 864, 1310, 2443 |
| AspS9I | GGNCC | 5 cut(s) | 578, 579, 1723, 2077, 2584 |
| AsuC2I | CCSGG | 1 cut(s) | 462 |
| AsuHPI | GGTGA | 6 cut(s) | 352, 970, 1162, 2042, 2152, 2252 |
| AvaI | CYCGRG | 2 cut(s) | 1838, 2581 |
| AvaII | GGWCC | 1 cut(s) | 1723 |
| BaeGI | GKGCMC | 1 cut(s) | 582 |
| BanII | GRGCYC | 5 cut(s) | 462, 582, 1837, 2233, 2738 |
| BauI | CACGAG | 1 cut(s) | 996 |
| BbsI | GAAGAC | 2 cut(s) | 1577, 2720 |
| Bbv12I | GWGCWC | 3 cut(s) | 997, 1992, 2738 |
| BbvI | GCAGC | 6 cut(s) | 680, 1189, 1765, 2033, 2242, 2281 |
| BceAI | ACGGC | 1 cut(s) | 41 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 657, 691, 977, 1011 |
| BciT130I | CCWGG | 2 cut(s) | 1523, 2081 |
| BciVI | GTATCC | 1 cut(s) | 868 |
| BclI | TGATCA | 1 cut(s) | 1482 |
| BcnI | CCSGG | 1 cut(s) | 462 |
| BcoDI | GTCTC | 6 cut(s) | 64, 116, 399, 825, 1080, 1228 |
| BfaI | CTAG | 2 cut(s) | 1967, 2823 |
| BfmI | CTRYAG | 4 cut(s) | 666, 1203, 2643, 2708 |
| BfuI | GTATCC | 1 cut(s) | 868 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 686 |
| Bme1390I | CCNGG | 3 cut(s) | 462, 1523, 2081 |
| Bme18I | GGWCC | 1 cut(s) | 1723 |
| BmeT110I | CYCGRG | 2 cut(s) | 1838, 2581 |
| BmgT120I | GGNCC | 5 cut(s) | 578, 579, 1723, 2077, 2584 |
| BmiI | GGNNCC | 1 cut(s) | 580 |
| BmrFI | CCNGG | 3 cut(s) | 462, 1523, 2081 |
| BmrI | ACTGGG | 2 cut(s) | 544, 2505 |
| BmsI | GCATC | 6 cut(s) | 997, 1143, 1339, 1920, 2256, 2462 |
| BmuI | ACTGGG | 2 cut(s) | 544, 2505 |
| BpiI | GAAGAC | 2 cut(s) | 1577, 2720 |
| BpmI | CTGGAG | 3 cut(s) | 1839, 2102, 2364 |
| BpuEI | CTTGAG | 2 cut(s) | 1421, 2488 |
| BpuMI | CCSGG | 1 cut(s) | 462 |
| BsaJI | CCNNGG | 4 cut(s) | 715, 1311, 1521, 2189 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 28, 58, 208, 238 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 639, 721, 938, 2067, 2461 |
| Bse118I | RCCGGY | 1 cut(s) | 632 |
| Bse1I | ACTGG | 5 cut(s) | 539, 1217, 2041, 2500, 2657 |
| Bse3DI | GCAATG | 3 cut(s) | 857, 1198, 2524 |
| BseBI | CCWGG | 2 cut(s) | 1523, 2081 |
| BseDI | CCNNGG | 4 cut(s) | 715, 1311, 1521, 2189 |
| BseGI | GGATG | 9 cut(s) | 748, 1040, 1099, 1387, 1481, 1660, 1866, 1960, 2231 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 639, 721, 938, 2067, 2461 |
| BseMI | GCAATG | 3 cut(s) | 857, 1198, 2524 |
| BseMII | CTCAG | 4 cut(s) | 28, 612, 836, 2057 |
| BseNI | ACTGG | 5 cut(s) | 539, 1217, 2041, 2500, 2657 |
| BseRI | GAGGAG | 4 cut(s) | 163, 788, 954, 2083 |
| BseSI | GKGCMC | 1 cut(s) | 582 |
| BseXI | GCAGC | 6 cut(s) | 680, 1189, 1765, 2033, 2242, 2281 |
| Bsh1236I | CGCG | 3 cut(s) | 850, 1308, 2443 |
| BshFI | GGCC | 7 cut(s) | 580, 680, 951, 1226, 2079, 2465, 2586 |
| BsiHKAI | GWGCWC | 3 cut(s) | 997, 1992, 2738 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1838, 2581 |
| BsiSI | CCGG | 4 cut(s) | 462, 568, 633, 2507 |
| BslFI | GGGAC | 3 cut(s) | 278, 995, 1340 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 639, 721, 938, 2067, 2461 |
| BsmAI | GTCTC | 6 cut(s) | 64, 116, 399, 825, 1080, 1228 |
| BsmBI | CGTCTC | 2 cut(s) | 64, 399 |
| BsmFI | GGGAC | 3 cut(s) | 278, 995, 1340 |
| BsmI | GAATGC | 4 cut(s) | 1255, 1872, 2145, 2184 |
| BsnI | GGCC | 7 cut(s) | 580, 680, 951, 1226, 2079, 2465, 2586 |
| BsoBI | CYCGRG | 2 cut(s) | 1838, 2581 |
| Bsp120I | GGGCCC | 1 cut(s) | 578 |
| Bsp1286I | GDGCHC | 7 cut(s) | 462, 582, 997, 1837, 1992, 2233, 2738 |
| Bsp1407I | TGTACA | 1 cut(s) | 1050 |
| Bsp143I | GATC | 2 cut(s) | 1303, 1482 |
| BspANI | GGCC | 7 cut(s) | 580, 680, 951, 1226, 2079, 2465, 2586 |
| BspCNI | CTCAG | 4 cut(s) | 27, 613, 835, 2058 |
| BspFNI | CGCG | 3 cut(s) | 850, 1308, 2443 |
| BspLI | GGNNCC | 1 cut(s) | 580 |
| BspMAI | CTGCAG | 4 cut(s) | 670, 1207, 2647, 2712 |
| BspPI | GGATC | 1 cut(s) | 1311 |
| BspQI | GCTCTTC | 1 cut(s) | 1825 |
| BsrBI | CCGCTC | 3 cut(s) | 255, 340, 838 |
| BsrDI | GCAATG | 3 cut(s) | 857, 1198, 2524 |
| BsrFI | RCCGGY | 1 cut(s) | 632 |
| BsrGI | TGTACA | 1 cut(s) | 1050 |
| BsrI | ACTGG | 5 cut(s) | 539, 1217, 2041, 2500, 2657 |
| BssAI | RCCGGY | 1 cut(s) | 632 |
| BssECI | CCNNGG | 4 cut(s) | 715, 1311, 1521, 2189 |
| BssMI | GATC | 2 cut(s) | 1303, 1482 |
| BssNAI | GTATAC | 1 cut(s) | 2521 |
| BssSI | CACGAG | 1 cut(s) | 996 |
| BssT1I | CCWWGG | 1 cut(s) | 2189 |
| Bst1107I | GTATAC | 1 cut(s) | 2521 |
| Bst2BI | CACGAG | 1 cut(s) | 996 |
| Bst2UI | CCWGG | 2 cut(s) | 1523, 2081 |
| Bst6I | CTCTTC | 3 cut(s) | 1122, 1825, 2230 |
| BstAUI | TGTACA | 1 cut(s) | 1050 |
| BstDEI | CTNAG | 6 cut(s) | 14, 621, 672, 822, 2066, 2749 |
| BstDSI | CCRYGG | 1 cut(s) | 715 |
| BstEII | GGTNACC | 1 cut(s) | 2158 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 936 |
| BstF5I | GGATG | 9 cut(s) | 748, 1040, 1099, 1387, 1481, 1660, 1866, 1960, 2231 |
| BstFNI | CGCG | 3 cut(s) | 850, 1308, 2443 |
| BstHHI | GCGC | 3 cut(s) | 864, 1310, 2443 |
| BstKTI | GATC | 2 cut(s) | 1306, 1485 |
| BstMAI | GTCTC | 6 cut(s) | 64, 116, 399, 825, 1080, 1228 |
| BstMBI | GATC | 2 cut(s) | 1303, 1482 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 168, 577, 677, 686, 835, 1202, 1930, 2133, 2561 |
| BstNI | CCWGG | 2 cut(s) | 1523, 2081 |
| BstNSI | RCATGY | 4 cut(s) | 988, 1018, 1296, 2124 |
| BstPI | GGTNACC | 1 cut(s) | 2158 |
| BstSCI | CCNGG | 3 cut(s) | 460, 1521, 2079 |
| BstSFI | CTRYAG | 4 cut(s) | 666, 1203, 2643, 2708 |
| BstSLI | GKGCMC | 1 cut(s) | 582 |
| BstUI | CGCG | 3 cut(s) | 850, 1308, 2443 |
| BstV1I | GCAGC | 6 cut(s) | 680, 1189, 1765, 2033, 2242, 2281 |
| BstV2I | GAAGAC | 2 cut(s) | 1577, 2720 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 891, 2730 |
| BstZ17I | GTATAC | 1 cut(s) | 2521 |
| BsuI | GTATCC | 1 cut(s) | 868 |
| BsuRI | GGCC | 7 cut(s) | 580, 680, 951, 1226, 2079, 2465, 2586 |
| BtgI | CCRYGG | 1 cut(s) | 715 |
| BtsCI | GGATG | 9 cut(s) | 748, 1040, 1099, 1387, 1481, 1660, 1866, 1960, 2231 |
| BtsIMutI | CAGTG | 7 cut(s) | 342, 618, 830, 1878, 2650, 2779, 2803 |
| CfoI | GCGC | 3 cut(s) | 864, 1310, 2443 |
| Cfr10I | RCCGGY | 1 cut(s) | 632 |
| Cfr13I | GGNCC | 5 cut(s) | 578, 579, 1723, 2077, 2584 |
| Csp6I | GTAC | 2 cut(s) | 799, 1051 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1426, 1461 |
| CviQI | GTAC | 2 cut(s) | 799, 1051 |
| DdeI | CTNAG | 6 cut(s) | 14, 621, 672, 822, 2066, 2749 |
| DpnI | GATC | 2 cut(s) | 1305, 1484 |
| DpnII | GATC | 2 cut(s) | 1303, 1482 |
| EaeI | YGGCCR | 1 cut(s) | 678 |
| Eam1104I | CTCTTC | 3 cut(s) | 1122, 1825, 2230 |
| EarI | CTCTTC | 3 cut(s) | 1122, 1825, 2230 |
| EciI | GGCGGA | 3 cut(s) | 43, 129, 393 |
| Ecl136II | GAGCTC | 1 cut(s) | 2736 |
| Eco130I | CCWWGG | 1 cut(s) | 2189 |
| Eco147I | AGGCCT | 1 cut(s) | 2465 |
| Eco24I | GRGCYC | 5 cut(s) | 462, 582, 1837, 2233, 2738 |
| Eco47I | GGWCC | 1 cut(s) | 1723 |
| Eco53kI | GAGCTC | 1 cut(s) | 2736 |
| Eco57I | CTGAAG | 4 cut(s) | 1218, 1443, 2135, 2586 |
| Eco88I | CYCGRG | 2 cut(s) | 1838, 2581 |
| Eco91I | GGTNACC | 1 cut(s) | 2158 |
| EcoICRI | GAGCTC | 1 cut(s) | 2736 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 936 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2077 |
| EcoO65I | GGTNACC | 1 cut(s) | 2158 |
| EcoRI | GAATTC | 2 cut(s) | 5, 469 |
| EcoRII | CCWGG | 2 cut(s) | 1521, 2079 |
| EcoT14I | CCWWGG | 1 cut(s) | 2189 |
| EcoT22I | ATGCAT | 3 cut(s) | 990, 1627, 2013 |
| EcoT38I | GRGCYC | 5 cut(s) | 462, 582, 1837, 2233, 2738 |
| ErhI | CCWWGG | 1 cut(s) | 2189 |
| Esp3I | CGTCTC | 2 cut(s) | 64, 399 |
| FaqI | GGGAC | 3 cut(s) | 278, 995, 1340 |
| FauI | CCCGC | 4 cut(s) | 292, 345, 831, 1749 |
| FauNDI | CATATG | 1 cut(s) | 2101 |
| FbaI | TGATCA | 1 cut(s) | 1482 |
| FblI | GTMKAC | 2 cut(s) | 2520, 2769 |
| FokI | GGATG | 9 cut(s) | 755, 1027, 1106, 1394, 1488, 1667, 1873, 1967, 2238 |
| FriOI | GRGCYC | 5 cut(s) | 462, 582, 1837, 2233, 2738 |
| FspBI | CTAG | 2 cut(s) | 1967, 2823 |
| FspI | TGCGCA | 1 cut(s) | 863 |
| GlaI | GCGC | 3 cut(s) | 863, 1309, 2442 |
| GsuI | CTGGAG | 3 cut(s) | 1839, 2102, 2364 |
| HaeIII | GGCC | 7 cut(s) | 580, 680, 951, 1226, 2079, 2465, 2586 |
| HapII | CCGG | 4 cut(s) | 462, 568, 633, 2507 |
| HhaI | GCGC | 3 cut(s) | 864, 1310, 2443 |
| Hin6I | GCGC | 3 cut(s) | 862, 1308, 2441 |
| HinP1I | GCGC | 3 cut(s) | 862, 1308, 2441 |
| HincII | GTYRAC | 2 cut(s) | 2493, 2625 |
| HindII | GTYRAC | 2 cut(s) | 2493, 2625 |
| HindIII | AAGCTT | 1 cut(s) | 350 |
| HinfI | GANTC | 5 cut(s) | 595, 1176, 1434, 1544, 2615 |
| HpaII | CCGG | 4 cut(s) | 462, 568, 633, 2507 |
| HphI | GGTGA | 6 cut(s) | 352, 970, 1162, 2042, 2152, 2252 |
| Hpy188I | TCNGA | 7 cut(s) | 157, 475, 559, 600, 729, 1482, 2764 |
| Hpy188III | TCNNGA | 6 cut(s) | 268, 541, 936, 998, 1840, 1982 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyCH4IV | ACGT | 2 cut(s) | 1784, 2754 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 168, 577, 677, 686, 835, 1202, 1930, 2133, 2561 |
| HpyF3I | CTNAG | 6 cut(s) | 14, 621, 672, 822, 2066, 2749 |
| HpySE526I | ACGT | 2 cut(s) | 1784, 2754 |
| HspAI | GCGC | 3 cut(s) | 862, 1308, 2441 |
| KroI | GCCGGC | 1 cut(s) | 632 |
| KroNI | GCCGGC | 1 cut(s) | 634 |
| Ksp22I | TGATCA | 1 cut(s) | 1482 |
| Kzo9I | GATC | 2 cut(s) | 1303, 1482 |
| LguI | GCTCTTC | 1 cut(s) | 1825 |
| LmnI | GCTCC | 6 cut(s) | 176, 475, 750, 1357, 2692, 2733 |
| Lsp1109I | GCAGC | 6 cut(s) | 680, 1189, 1765, 2033, 2242, 2281 |
| LweI | GCATC | 6 cut(s) | 997, 1143, 1339, 1920, 2256, 2462 |
| MaeI | CTAG | 2 cut(s) | 1967, 2823 |
| MaeII | ACGT | 2 cut(s) | 1784, 2754 |
| MaeIII | GTNAC | 4 cut(s) | 1150, 1715, 2158, 2798 |
| MalI | GATC | 2 cut(s) | 1305, 1484 |
| MbiI | CCGCTC | 3 cut(s) | 255, 340, 838 |
| MboI | GATC | 2 cut(s) | 1303, 1482 |
| MhlI | GDGCHC | 7 cut(s) | 462, 582, 997, 1837, 1992, 2233, 2738 |
| MlyI | GAGTC | 1 cut(s) | 1428 |
| Mph1103I | ATGCAT | 3 cut(s) | 990, 1627, 2013 |
| MroNI | GCCGGC | 1 cut(s) | 632 |
| MroXI | GAANNNNTTC | 4 cut(s) | 469, 1510, 2289, 2717 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1071, 1105, 1139, 1394, 2016, 2423 |
| MspA1I | CMGCKG | 2 cut(s) | 1550, 1756 |
| MspI | CCGG | 4 cut(s) | 462, 568, 633, 2507 |
| MspR9I | CCNGG | 3 cut(s) | 462, 1523, 2081 |
| Mva1269I | GAATGC | 4 cut(s) | 1255, 1872, 2145, 2184 |
| MvaI | CCWGG | 2 cut(s) | 1523, 2081 |
| MvnI | CGCG | 3 cut(s) | 850, 1308, 2443 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 168, 577, 677, 686, 835, 1202, 1930, 2133, 2561 |
| NaeI | GCCGGC | 1 cut(s) | 634 |
| NciI | CCSGG | 1 cut(s) | 462 |
| NdeI | CATATG | 1 cut(s) | 2101 |
| NdeII | GATC | 2 cut(s) | 1303, 1482 |
| NgoMIV | GCCGGC | 1 cut(s) | 632 |
| NlaIV | GGNNCC | 1 cut(s) | 580 |
| NmeAIII | GCCGAG | 1 cut(s) | 1336 |
| NmuCI | GTSAC | 3 cut(s) | 1150, 2158, 2798 |
| NsbI | TGCGCA | 1 cut(s) | 863 |
| NsiI | ATGCAT | 3 cut(s) | 990, 1627, 2013 |
| NspI | RCATGY | 4 cut(s) | 988, 1018, 1296, 2124 |
| PaeI | GCATGC | 1 cut(s) | 1018 |
| PaeR7I | CTCGAG | 1 cut(s) | 1838 |
| PceI | AGGCCT | 1 cut(s) | 2465 |
| PciSI | GCTCTTC | 1 cut(s) | 1825 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1845 |
| PctI | GAATGC | 4 cut(s) | 1255, 1872, 2145, 2184 |
| PdiI | GCCGGC | 1 cut(s) | 634 |
| PdmI | GAANNNNTTC | 4 cut(s) | 469, 1510, 2289, 2717 |
| PfeI | GAWTC | 4 cut(s) | 595, 1176, 1544, 2615 |
| PleI | GAGTC | 1 cut(s) | 1428 |
| PpsI | GAGTC | 1 cut(s) | 1428 |
| PshBI | ATTAAT | 2 cut(s) | 279, 2216 |
| PsiI | TTATAA | 1 cut(s) | 1694 |
| Psp124BI | GAGCTC | 1 cut(s) | 2738 |
| Psp6I | CCWGG | 2 cut(s) | 1521, 2079 |
| PspEI | GGTNACC | 1 cut(s) | 2158 |
| PspGI | CCWGG | 2 cut(s) | 1521, 2079 |
| PspN4I | GGNNCC | 1 cut(s) | 580 |
| PspOMI | GGGCCC | 1 cut(s) | 578 |
| PspPI | GGNCC | 5 cut(s) | 578, 579, 1723, 2077, 2584 |
| PstI | CTGCAG | 4 cut(s) | 670, 1207, 2647, 2712 |
| PvuII | CAGCTG | 1 cut(s) | 1550 |
| RsaI | GTAC | 2 cut(s) | 800, 1052 |
| RsaNI | GTAC | 2 cut(s) | 799, 1051 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1071, 1105, 1139, 1394, 2016, 2423 |
| SacI | GAGCTC | 1 cut(s) | 2738 |
| SapI | GCTCTTC | 1 cut(s) | 1825 |
| Sau3AI | GATC | 2 cut(s) | 1303, 1482 |
| Sau96I | GGNCC | 5 cut(s) | 578, 579, 1723, 2077, 2584 |
| SchI | GAGTC | 1 cut(s) | 1428 |
| ScrFI | CCNGG | 3 cut(s) | 462, 1523, 2081 |
| SduI | GDGCHC | 7 cut(s) | 462, 582, 997, 1837, 1992, 2233, 2738 |
| SfaNI | GCATC | 6 cut(s) | 997, 1143, 1339, 1920, 2256, 2462 |
| SfcI | CTRYAG | 4 cut(s) | 666, 1203, 2643, 2708 |
| Sfr274I | CTCGAG | 1 cut(s) | 1838 |
| SinI | GGWCC | 1 cut(s) | 1723 |
| SlaI | CTCGAG | 1 cut(s) | 1838 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1071, 1105, 1139, 1394, 2016, 2423 |
| SmlI | CTYRAG | 3 cut(s) | 1436, 1838, 2467 |
| SmoI | CTYRAG | 3 cut(s) | 1436, 1838, 2467 |
| SphI | GCATGC | 1 cut(s) | 1018 |
| SseBI | AGGCCT | 1 cut(s) | 2465 |
| SspI | AATATT | 2 cut(s) | 1270, 1950 |
| SspMI | CTAG | 2 cut(s) | 1967, 2823 |
| SstI | GAGCTC | 1 cut(s) | 2738 |
| StuI | AGGCCT | 1 cut(s) | 2465 |
| StyD4I | CCNGG | 3 cut(s) | 460, 1521, 2079 |
| StyI | CCWWGG | 1 cut(s) | 2189 |
| TaiI | ACGT | 2 cut(s) | 1787, 2757 |
| TaqI | TCGA | 7 cut(s) | 699, 1137, 1839, 1848, 2233, 2293, 2657 |
| TatI | WGTACW | 1 cut(s) | 1050 |
| TauI | GCSGC | 6 cut(s) | 145, 148, 201, 409, 499, 1927 |
| TfiI | GAWTC | 4 cut(s) | 595, 1176, 1544, 2615 |
| TscAI | CASTG | 7 cut(s) | 349, 625, 830, 1885, 2657, 2779, 2803 |
| TseFI | GTSAC | 3 cut(s) | 1150, 2158, 2798 |
| TseI | GCWGC | 6 cut(s) | 668, 1202, 1753, 2021, 2255, 2269 |
| Tsp45I | GTSAC | 3 cut(s) | 1150, 2158, 2798 |
| TspGWI | ACGGA | 6 cut(s) | 52, 381, 732, 785, 1795, 2828 |
| TspRI | CASTG | 7 cut(s) | 349, 625, 830, 1885, 2657, 2779, 2803 |
| VpaK11BI | GGWCC | 1 cut(s) | 1723 |
| VspI | ATTAAT | 2 cut(s) | 279, 2216 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 936 |
| XapI | RAATTY | 7 cut(s) | 5, 151, 248, 469, 523, 2816, 2843 |
| XceI | RCATGY | 4 cut(s) | 988, 1018, 1296, 2124 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 688 |
| XhoI | CTCGAG | 1 cut(s) | 1838 |
| XmiI | GTMKAC | 2 cut(s) | 2520, 2769 |
| XmnI | GAANNNNTTC | 4 cut(s) | 469, 1510, 2289, 2717 |
| XspI | CTAG | 2 cut(s) | 1967, 2823 |
| Zsp2I | ATGCAT | 3 cut(s) | 990, 1627, 2013 |