Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0011908

Physical Location & Seq

Genomic Coordinates Reverse (-)

6743241 .. 6751353

Gene Structure 8113 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g06690.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGGAGTTTTCAGTCTCCACCCCACGCTATCACTACCACTATCCCAAGCCCACCACCACCTTCTCTCTCAAACCCCCAAATTCTCAACCCTCTTCCAACCAACTCCGTCGCCCCAAAACCATCACCACTCCTCCTCGCCCCACCAAGCCCATCCCCAAAATCCCCTCTAACCCCTTCAAGAACCTCTCTAATCCCACCCATGTCCCCACTCCTCCCATTACCACTTCTCTCACCAACAAGCTCTGGCTCACCAGCAAGCTCTCTCCTCCTCCGCCGGATATAGACGACTCCGACGAAGAAGAAGAAATAGAAGAAGTTAAATACAATGAGCCGAAGAAGAAGAAACCGGGACGGCCCAGAGTCGAATTCCGGCAAGAAGGGAAGATATTCGTCGGGAATTTACCGAATTGGATCAAGAAAAACGAGCTCTCGGATTTTTTCCGGCAATTCGGACCGATCACGAGCGTGATTCTGATCAAGGGCCACGACAGCACCGAGAGAAACGCCGGCTTCGGATTTGTTATATACGGCGGTCCCAATGCGGCCAAGTCCGCCATGAAGGCGGTGGAGTTTGACGGCGTGGAGTTTCACGGGAGGGTTCTGAGTGTTAGGTTGGATGATGGGGGCAGATTGAAGGACAGAGCTGAGGAGAGGGCGAGGTGGATTGAGGAGGGTGACGGTGACGGCGGTGTGGAGTTCAGGGCTCGGTCTAAGTGGCACAAAGAGAGGCAGAGCTCTCGGAATGCGTTGCGAAAGGTTATGGAGACGGCGCCGGAGAACTGGCAGGCGGTGGTTAACACTTTCGACAGGATTGACAAGCCTTCTAGAGGAGAGTATGGCCTGATGGTCAAGTATTATGCTAGGCGAGGGGATATGCATCGTGCTCGTGAAACATTTGAGAGCATGAGAGCAAGAGGAATAGAGCCAACTTCACATGTATACACGAGCCTGATTCATGCTTATGCAGTTGGCAGAGACATGGAAGAAGCATTATCTTGTGTTAGGAAAATGAAGGACGAGGGTGTTGAAATGAGTTTGGTGACTTACAGTATTATAGTTGGGGGATTTGCAAAAGTTGGCAATGCCAAAGCTGCAGATGACTGGTTCAAGGAGGCCAAAGAGAGACATACAACTCTAAATGCAATCATTTATGGGAATATTGTTTATGCACATTGTCAAACATGTAATATGGATCGAGCTGAGGCTTTGGTACGGGAAATGGAAGAAGCAGGTATAGATGCTCCTATCGACATATATCACACCATGATGGATGGTTACACAATGGTTGGTGACGAAGATAAATGTTTGATTGTATTTGAGCGACTGAAGGAATGTGGCTTCACACCTTCTATCATCAGTTATGGATGTCTGATCAATCTTTACGTTAAGGTCGGAAAAGTTTCCAAAGCGTTGGAAGTCAGTAAAAGGATGGAAACAACCGGCATAAAACATAACATGAAGACGTACTCCATGTTGATTAATGGGTTCTTGAAGTTAAAAGACTGGGCTAATGCATTTGCAGTTATAGAAGATTTGATGAAGGATGGTCTGAAGCCCGATGTAGTCCTGTATAATAACATTATAACAGCATTTTGTGGAATGGGTAACATGAATCGGGCTGTTCGCACTGTCAAAGAAATGCAGAAGGAGAGGCATAGACCTACGTCACGTACATTTATGCCAATAATACATGGTTTTGCAAGAGCTGGAGATATGAGAAGAGCCTTAGAGATTTTTGATATGATGAGGATGAGTGGATGTATTCCAACTGTGCATACTTTCAATGCTCTAGTTCTTGGTCTTGTGGAGAAGCGGCAGATGGACAAGGCTGTTGAAATATTGGATGAGATGACACTTGCAGGAATTTGTCCAAATCAACACACATATACAACTATCATGAATGGTTATGCATCTTTAGGTGATACTGGGAAAGCTTTCGAGTATTTTTCCAAATTGAGGAATGATGGCCTAGAGATTGATGTTTTCACATATGAGGCATTGCTGAAGGCATGTTGCAAAGCAGGCAAAATGCAGAGTGCTTTAGCTGTCACCAAGGAAATGAGTGCTCAAAAAATTCCAAGGAACACCTTCGTGTACAACATATTAGTTGATGGATGGGCTCGAAGAGGTGATGTTTGGGAGGCTGCTGACTTGATGCAGCAAATGAAACGTGAAGGGGTTCAACCTGATATACACTCCTACACGTCTTTCATAAATGCTTGTTGCAAGGCTGGAGACATGCAGAGAGCTGCGAAAACAATCGACGAAATGAAAACTTTTGGAGTGAAGCCAAATATTAAAACTTATACCACACTGATACATGGTTGGGCACGTGCTTCTCTACCTGAGAAGGCTTTGAGATGCTTCAAAGATATGAAGTTGGCTGGATTGAAGCCAGACAAAGCTGTGTACCATTGCTTAATGACATCTCTGTTGTCAAGGGCTACTGTAGCTGAAGCTTACATTTATTCTGGTCTTCTGTCTATCTGCAAGGAGATGATAGAATCTGGTTTGACTGTGGATATGGGAACTGCAGTTCACTGGTCAAGGTGCTTATGCAAAATTGAACGATCAGGTGGTGAGCTTACAGAAGCTCTGCAGAAGACCTTCCCTCCTGATTGGAACTCATGTCATACTTTGTCTACGAGTTCCGATGTAGACAGTGATTATGAAGTTGACGTAAATAGTGATGGTGATGATGAAGATGACAGGGAGTTTGCTAGTAGAATAGATAACGTTATGATGACTGATGAGGATAGTCTGAGGCACGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 RRM_1

Protein Analysis

925

Amino Acids

104.33

Weight (kDa)

7.94

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	129 - 201	3e-13	RNA recognition motif
PPR_2	PF13041	281 - 322	2.5e-08	PPR repeat family
TPR_24	PF23276	287 - 399	2e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	292 - 364	6.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	313 - 358	2e-09	PPR repeat family
PPR	PF01535	313 - 342	6.7e-06	PPR repeat
PPR_3	PF13812	314 - 356	1.9e-06	Pentatricopeptide repeat domain
PPR_3	PF13812	403 - 463	1.2e-08	Pentatricopeptide repeat domain
TPR_24	PF23276	438 - 546	8.4e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	449 - 498	5.5e-11	PPR repeat family
PPR_long	PF17177	503 - 597	1.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	508 - 562	3.9e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	515 - 548	8.8e-08	PPR repeat
PPR_2	PF13041	519 - 568	2.9e-11	PPR repeat family
TPR_24	PF23276	548 - 651	9.9e-10	Fungal tetratrico peptide repeats
PPR_3	PF13812	558 - 598	5e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	558 - 601	1.7e-08	PPR repeat family
PPR_long	PF17177	573 - 679	5.6e-12	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	589 - 637	8.2e-13	PPR repeat family
PPR_2	PF13041	628 - 673	1.1e-10	PPR repeat family
PPR_3	PF13812	650 - 703	7.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	655 - 688	9.7e-07	PPR repeat
PPR_2	PF13041	660 - 707	9.9e-10	PPR repeat family
TPR_24	PF23276	668 - 792	5.5e-09	Fungal tetratrico peptide repeats
PPR_long	PF17177	671 - 809	1.9e-13	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	695 - 743	2.1e-14	PPR repeat family
TPR_24	PF23276	707 - 810	2.9e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	718 - 773	2.9e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	726 - 758	9.1e-08	PPR repeat
PPR_2	PF13041	729 - 777	7.4e-15	PPR repeat family
PPR	PF01535	733 - 762	2.6e-06	PPR repeat
PPR_3	PF13812	755 - 808	3.1e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	761 - 793	9.4e-06	PPR repeat
PPR_2	PF13041	768 - 811	4.2e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011908)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04810 AT5G04810
fragaria_vesca	FvH4_7g06690
malus_domestica	MD07G1061700.v1.1
prunus_persica	Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1
pyrus_communis	pycom07g04720
rosa_chinensis	RchiOBHm_Chr1g0336351
rosa_laevigata	RLG00000029372
rosa_multiflora	Rmu_sc0005261.1_g000013 Rmu_sc0005480.1_g000007
rosa_roxburghii	Rroxscaffold_4G00315730
rosa_rugosa	Rorug01G0125300
rosa_samantha	Rh1AG144500 Rh1BG114100 Rh1CG136000 Rh1DG151200
rosa_wichuraiana	Rw1G011840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1583
Acc36I	ACCTGC	1 cut(s)	1220
AccB1I	GGYRCC	1 cut(s)	769
AccI	GTMKAC	3 cut(s)	939, 2642, 2658
AciI	CCGC	8 cut(s)	272, 531, 542, 552, 563, 687, 788, 1813
AclI	AACGTT	1 cut(s)	2736
AclWI	GGATC	2 cut(s)	419, 1200
AcoI	YGGCCR	1 cut(s)	543
AcsI	RAATTY	5 cut(s)	79, 365, 397, 1863, 2073
AcuI	CTGAAG	4 cut(s)	1346, 1571, 2024, 2475
AcvI	CACGTG	1 cut(s)	2333
AcyI	GRCGYC	1 cut(s)	770
AfaI	GTAC	5 cut(s)	1212, 1466, 1672, 2096, 2411
AfiI	CCNNNNNNNGG	2 cut(s)	827, 1956
AflIII	ACRYGT	3 cut(s)	934, 1181, 2202
AjiI	CACGTC	1 cut(s)	2205
AleI	CACNNNNGTG	2 cut(s)	464, 2090
AloI	GAACNNNNNNTCC	2 cut(s)	2520, 2552
Alw21I	GWGCWC	4 cut(s)	429, 737, 886, 2068
Alw26I	GTCTC	5 cut(s)	19, 758, 969, 1117, 2229
AlwI	GGATC	2 cut(s)	419, 1200
AoxI	GGCC	6 cut(s)	353, 481, 543, 838, 1113, 1966
ApeKI	GCWGC	4 cut(s)	1091, 2144, 2158, 2249
ApoI	RAATTY	5 cut(s)	79, 365, 397, 1863, 2073
ArsI	GACNNNNNNTTYG	2 cut(s)	2699, 2731
AseI	ATTAAT	1 cut(s)	1479
Asp700I	GAANNNNTTC	6 cut(s)	386, 1399, 1934, 2087, 2178, 2606
AspLEI	GCGC	1 cut(s)	772
AspS9I	GGNCC	4 cut(s)	354, 452, 481, 533
AsuC2I	CCSGG	1 cut(s)	348
AvaII	GGWCC	2 cut(s)	452, 533
BaeGI	GKGCMC	1 cut(s)	2332
BanI	GGYRCC	1 cut(s)	769
BanII	GRGCYC	4 cut(s)	429, 706, 737, 2122
BauI	CACGAG	3 cut(s)	460, 885, 943
BbrPI	CACGTG	1 cut(s)	2333
BbsI	GAAGAC	3 cut(s)	1466, 2468, 2609
Bbv12I	GWGCWC	4 cut(s)	429, 737, 886, 2068
BbvCI	CCTCAGC	2 cut(s)	645, 1200
BbvI	GCAGC	4 cut(s)	1078, 2131, 2170, 2236
BceAI	ACGGC	5 cut(s)	368, 544, 592, 700, 783
BcgI	CGANNNNNNTGC	4 cut(s)	719, 753, 866, 900
BclI	TGATCA	2 cut(s)	474, 1371
BcnI	CCSGG	1 cut(s)	348
BcoDI	GTCTC	5 cut(s)	19, 758, 969, 1117, 2229
BfaI	CTAG	5 cut(s)	825, 861, 1790, 1970, 2721
BfmI	CTRYAG	4 cut(s)	1092, 2448, 2532, 2597
BfoI	RGCGCY	1 cut(s)	773
BfuAI	ACCTGC	1 cut(s)	1220
BglI	GCCNNNNNGGC	1 cut(s)	560
BisI	GCNGC	6 cut(s)	543, 1092, 1814, 2145, 2159, 2250
BlsI	GCNGC	6 cut(s)	544, 1093, 1815, 2146, 2160, 2251
Bme1390I	CCNGG	1 cut(s)	348
Bme18I	GGWCC	2 cut(s)	452, 533
BmgBI	CACGTC	1 cut(s)	2205
BmgT120I	GGNCC	4 cut(s)	354, 452, 481, 533
BmiI	GGNNCC	2 cut(s)	535, 771
BmrFI	CCNGG	1 cut(s)	348
BmrI	ACTGGG	2 cut(s)	1513, 1935
BmsI	GCATC	5 cut(s)	886, 1228, 1919, 2145, 2351
BmuI	ACTGGG	2 cut(s)	1513, 1935
BoxI	GACNNNNGTC	1 cut(s)	1663
BpiI	GAAGAC	3 cut(s)	1466, 2468, 2609
BpmI	CTGGAG	2 cut(s)	1728, 2253
Bpu10I	CCTNAGC	2 cut(s)	645, 1200
BpuMI	CCSGG	1 cut(s)	348
BsaAI	YACGTR	2 cut(s)	1670, 2333
BsaBI	GATNNNNATC	2 cut(s)	473, 876
BsaHI	GRCGYC	1 cut(s)	770
BsaJI	CCNNGG	2 cut(s)	2052, 2078
BsaXI	ACNNNNNCTCC	4 cut(s)	115, 145, 2596, 2626
Bsc4I	CCNNNNNNNGG	2 cut(s)	827, 1956
Bse118I	RCCGGY	2 cut(s)	506, 1439
Bse1I	ACTGG	5 cut(s)	785, 1106, 1508, 1930, 2546
Bse3DI	GCAATG	3 cut(s)	1087, 1997, 2413
Bse8I	GATNNNNATC	2 cut(s)	473, 876
BseDI	CCNNGG	2 cut(s)	2052, 2078
BseJI	GATNNNNATC	2 cut(s)	473, 876
BseLI	CCNNNNNNNGG	2 cut(s)	827, 1956
BseMI	GCAATG	3 cut(s)	1087, 1997, 2413
BseMII	CTCAG	5 cut(s)	593, 636, 1191, 2337, 2753
BseNI	ACTGG	5 cut(s)	785, 1106, 1508, 1930, 2546
BseRI	GAGGAG	8 cut(s)	120, 123, 201, 255, 258, 662, 683, 843
BseSI	GKGCMC	1 cut(s)	2332
BseXI	GCAGC	4 cut(s)	1078, 2131, 2170, 2236
BshFI	GGCC	6 cut(s)	355, 483, 545, 840, 1115, 1968
BshNI	GGYRCC	1 cut(s)	769
BsiHKAI	GWGCWC	4 cut(s)	429, 737, 886, 2068
BsiSI	CCGG	7 cut(s)	275, 347, 370, 442, 507, 773, 1440
BslFI	GGGAC	3 cut(s)	188, 363, 519
BslI	CCNNNNNNNGG	2 cut(s)	827, 1956
BsmAI	GTCTC	5 cut(s)	19, 758, 969, 1117, 2229
BsmBI	CGTCTC	1 cut(s)	758
BsmFI	GGGAC	3 cut(s)	188, 363, 519
BsmI	GAATGC	1 cut(s)	748
BsnI	GGCC	6 cut(s)	355, 483, 545, 840, 1115, 1968
Bsp1286I	GDGCHC	7 cut(s)	429, 706, 737, 886, 2068, 2122, 2332
Bsp1407I	TGTACA	1 cut(s)	2094
Bsp143I	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
BspACI	CCGC	8 cut(s)	272, 531, 542, 552, 563, 687, 788, 1813
BspANI	GGCC	6 cut(s)	355, 483, 545, 840, 1115, 1968
BspCNI	CTCAG	5 cut(s)	594, 637, 1192, 2338, 2754
BspHI	TCATGA	1 cut(s)	1896
BspLI	GGNNCC	2 cut(s)	535, 771
BspMAI	CTGCAG	3 cut(s)	1096, 2536, 2601
BspMI	ACCTGC	1 cut(s)	1220
BspPI	GGATC	2 cut(s)	419, 1200
BspQI	GCTCTTC	1 cut(s)	1714
BspT107I	GGYRCC	1 cut(s)	769
BsrDI	GCAATG	3 cut(s)	1087, 1997, 2413
BsrFI	RCCGGY	2 cut(s)	506, 1439
BsrGI	TGTACA	1 cut(s)	2094
BsrI	ACTGG	5 cut(s)	785, 1106, 1508, 1930, 2546
BssAI	RCCGGY	2 cut(s)	506, 1439
BssECI	CCNNGG	2 cut(s)	2052, 2078
BssMI	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
BssNAI	GTATAC	1 cut(s)	940
BssNI	GRCGYC	1 cut(s)	770
BssSI	CACGAG	3 cut(s)	460, 885, 943
BssT1I	CCWWGG	2 cut(s)	2052, 2078
Bst1107I	GTATAC	1 cut(s)	940
Bst2BI	CACGAG	3 cut(s)	460, 885, 943
Bst4CI	ACNGT	7 cut(s)	680, 1049, 1630, 1771, 2449, 2518, 2663
Bst6I	CTCTTC	3 cut(s)	97, 1714, 2119
BstACI	GRCGYC	1 cut(s)	770
BstAUI	TGTACA	1 cut(s)	2094
BstBAI	YACGTR	2 cut(s)	1670, 2333
BstC8I	GCNNGC	4 cut(s)	257, 508, 786, 2023
BstDEI	CTNAG	7 cut(s)	602, 645, 711, 1200, 1726, 2346, 2762
BstENI	CCTNNNNNAGG	1 cut(s)	825
BstH2I	RGCGCY	1 cut(s)	773
BstHHI	GCGC	1 cut(s)	772
BstKTI	GATC	6 cut(s)	414, 459, 477, 1195, 1374, 2573
BstMAI	GTCTC	5 cut(s)	19, 758, 969, 1117, 2229
BstMBI	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
BstMWI	GCNNNNNNNGC	6 cut(s)	489, 551, 560, 1091, 2022, 2450
BstNSI	RCATGY	4 cut(s)	938, 1185, 2013, 2242
BstPAI	GACNNNNGTC	1 cut(s)	1663
BstSCI	CCNGG	1 cut(s)	346
BstSFI	CTRYAG	4 cut(s)	1092, 2448, 2532, 2597
BstSLI	GKGCMC	1 cut(s)	2332
BstV1I	GCAGC	4 cut(s)	1078, 2131, 2170, 2236
BstV2I	GAAGAC	3 cut(s)	1466, 2468, 2609
BstXI	CCANNNNNNTGG	1 cut(s)	1411
BstZ17I	GTATAC	1 cut(s)	940
BsuRI	GGCC	6 cut(s)	355, 483, 545, 840, 1115, 1968
BtrI	CACGTC	1 cut(s)	2205
BtsIMutI	CAGTG	4 cut(s)	1626, 2312, 2539, 2668
BveI	ACCTGC	1 cut(s)	1220
Cac8I	GCNNGC	4 cut(s)	257, 508, 786, 2023
CciI	TCATGA	1 cut(s)	1896
CfoI	GCGC	1 cut(s)	772
Cfr10I	RCCGGY	2 cut(s)	506, 1439
Cfr13I	GGNCC	4 cut(s)	354, 452, 481, 533
CpoI	CGGWCCG	1 cut(s)	452
Csp6I	GTAC	5 cut(s)	1211, 1465, 1671, 2095, 2410
CspI	CGGWCCG	1 cut(s)	452
CviQI	GTAC	5 cut(s)	1211, 1465, 1671, 2095, 2410
DdeI	CTNAG	7 cut(s)	602, 645, 711, 1200, 1726, 2346, 2762
DinI	GGCGCC	1 cut(s)	771
DpnI	GATC	6 cut(s)	413, 458, 476, 1194, 1373, 2572
DpnII	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
EaeI	YGGCCR	1 cut(s)	543
Eam1104I	CTCTTC	3 cut(s)	97, 1714, 2119
EarI	CTCTTC	3 cut(s)	97, 1714, 2119
EciI	GGCGGA	2 cut(s)	261, 541
Ecl136II	GAGCTC	2 cut(s)	427, 735
Eco130I	CCWWGG	2 cut(s)	2052, 2078
Eco24I	GRGCYC	4 cut(s)	429, 706, 737, 2122
Eco47I	GGWCC	2 cut(s)	452, 533
Eco53kI	GAGCTC	2 cut(s)	427, 735
Eco57I	CTGAAG	4 cut(s)	1346, 1571, 2024, 2475
Eco72I	CACGTG	1 cut(s)	2333
EcoICRI	GAGCTC	2 cut(s)	427, 735
EcoNI	CCTNNNNNAGG	1 cut(s)	825
EcoRI	GAATTC	1 cut(s)	365
EcoT14I	CCWWGG	2 cut(s)	2052, 2078
EcoT22I	ATGCAT	3 cut(s)	879, 1516, 1912
EcoT38I	GRGCYC	4 cut(s)	429, 706, 737, 2122
EgeI	GGCGCC	1 cut(s)	771
EheI	GGCGCC	1 cut(s)	771
ErhI	CCWWGG	2 cut(s)	2052, 2078
Esp3I	CGTCTC	1 cut(s)	758
FaqI	GGGAC	3 cut(s)	188, 363, 519
FauNDI	CATATG	1 cut(s)	1990
FbaI	TGATCA	2 cut(s)	474, 1371
FblI	GTMKAC	3 cut(s)	939, 2642, 2658
Fnu4HI	GCNGC	6 cut(s)	543, 1092, 1814, 2145, 2159, 2250
FriOI	GRGCYC	4 cut(s)	429, 706, 737, 2122
Fsp4HI	GCNGC	6 cut(s)	543, 1092, 1814, 2145, 2159, 2250
FspBI	CTAG	5 cut(s)	825, 861, 1790, 1970, 2721
GlaI	GCGC	1 cut(s)	771
GluI	GCNGC	6 cut(s)	543, 1092, 1814, 2145, 2159, 2250
GsuI	CTGGAG	2 cut(s)	1728, 2253
HaeII	RGCGCY	1 cut(s)	773
HaeIII	GGCC	6 cut(s)	355, 483, 545, 840, 1115, 1968
HapII	CCGG	7 cut(s)	275, 347, 370, 442, 507, 773, 1440
HhaI	GCGC	1 cut(s)	772
Hin1I	GRCGYC	1 cut(s)	770
Hin6I	GCGC	1 cut(s)	770
HinP1I	GCGC	1 cut(s)	770
HincII	GTYRAC	2 cut(s)	796, 2677
HindII	GTYRAC	2 cut(s)	796, 2677
HindIII	AAGCTT	2 cut(s)	1932, 2457
HinfI	GANTC	6 cut(s)	287, 360, 469, 952, 1612, 2504
HpaI	GTTAAC	1 cut(s)	796
HpaII	CCGG	7 cut(s)	275, 347, 370, 442, 507, 773, 1440
Hpy166II	GTNNAC	8 cut(s)	796, 940, 2095, 2410, 2539, 2643, 2659, 2677
Hpy188III	TCNNGA	9 cut(s)	178, 394, 415, 460, 825, 887, 1489, 1897, 2615
Hpy8I	GTNNAC	8 cut(s)	796, 940, 2095, 2410, 2539, 2643, 2659, 2677
Hpy99I	CGWCG	4 cut(s)	111, 296, 395, 2267
HpyCH4III	ACNGT	7 cut(s)	680, 1049, 1630, 1771, 2449, 2518, 2663
HpyCH4IV	ACGT	9 cut(s)	1383, 1463, 1664, 1669, 2170, 2204, 2332, 2679, 2736
HpyF10VI	GCNNNNNNNGC	6 cut(s)	489, 551, 560, 1091, 2022, 2450
HpyF3I	CTNAG	7 cut(s)	602, 645, 711, 1200, 1726, 2346, 2762
HpySE526I	ACGT	9 cut(s)	1383, 1463, 1664, 1669, 2170, 2204, 2332, 2679, 2736
Hsp92I	GRCGYC	1 cut(s)	770
HspAI	GCGC	1 cut(s)	770
KasI	GGCGCC	1 cut(s)	769
KroI	GCCGGC	1 cut(s)	506
KroNI	GCCGGC	1 cut(s)	508
Ksp22I	TGATCA	2 cut(s)	474, 1371
KspAI	GTTAAC	1 cut(s)	796
Kzo9I	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
LguI	GCTCTTC	1 cut(s)	1714
LmnI	GCTCC	1 cut(s)	1246
Lsp1109I	GCAGC	4 cut(s)	1078, 2131, 2170, 2236
LweI	GCATC	5 cut(s)	886, 1228, 1919, 2145, 2351
MaeI	CTAG	5 cut(s)	825, 861, 1790, 1970, 2721
MaeII	ACGT	9 cut(s)	1383, 1463, 1664, 1669, 2170, 2204, 2332, 2679, 2736
MaeIII	GTNAC	8 cut(s)	674, 680, 1039, 1274, 1289, 1604, 1665, 2047
MalI	GATC	6 cut(s)	413, 458, 476, 1194, 1373, 2572
MboI	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
MhlI	GDGCHC	7 cut(s)	429, 706, 737, 886, 2068, 2122, 2332
MluCI	AATT	9 cut(s)	79, 365, 397, 406, 446, 1863, 1952, 2073, 2562
Mly113I	GGCGCC	1 cut(s)	770
MlyI	GAGTC	2 cut(s)	281, 369
MmeI	TCCRAC	6 cut(s)	120, 315, 594, 1372, 1392, 1790
Mph1103I	ATGCAT	3 cut(s)	879, 1516, 1912
MroNI	GCCGGC	1 cut(s)	506
MroXI	GAANNNNTTC	6 cut(s)	386, 1399, 1934, 2087, 2178, 2606
MseI	TTAA	7 cut(s)	318, 795, 1386, 1479, 1496, 2298, 2420
MslI	CAYNNNNRTG	4 cut(s)	464, 960, 1265, 2090
MspI	CCGG	7 cut(s)	275, 347, 370, 442, 507, 773, 1440
MspR9I	CCNGG	1 cut(s)	348
Mva1269I	GAATGC	1 cut(s)	748
MwoI	GCNNNNNNNGC	6 cut(s)	489, 551, 560, 1091, 2022, 2450
NaeI	GCCGGC	1 cut(s)	508
NarI	GGCGCC	1 cut(s)	770
NciI	CCSGG	1 cut(s)	348
NdeI	CATATG	1 cut(s)	1990
NdeII	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
NgoMIV	GCCGGC	1 cut(s)	506
NlaIV	GGNNCC	2 cut(s)	535, 771
NmuCI	GTSAC	6 cut(s)	674, 680, 1039, 1289, 1665, 2047
NsiI	ATGCAT	3 cut(s)	879, 1516, 1912
NspI	RCATGY	4 cut(s)	938, 1185, 2013, 2242
OliI	CACNNNNGTG	2 cut(s)	464, 2090
PagI	TCATGA	1 cut(s)	1896
PciI	ACATGT	2 cut(s)	934, 1181
PciSI	GCTCTTC	1 cut(s)	1714
PcsI	WCGNNNNNNNCGW	2 cut(s)	291, 492
PctI	GAATGC	1 cut(s)	748
PdiI	GCCGGC	1 cut(s)	508
PdmI	GAANNNNTTC	6 cut(s)	386, 1399, 1934, 2087, 2178, 2606
PfeI	GAWTC	4 cut(s)	469, 952, 1612, 2504
PkrI	GCNGC	6 cut(s)	544, 1093, 1815, 2146, 2160, 2251
PleI	GAGTC	2 cut(s)	281, 368
PluTI	GGCGCC	1 cut(s)	773
PmaCI	CACGTG	1 cut(s)	2333
PmlI	CACGTG	1 cut(s)	2333
PpsI	GAGTC	2 cut(s)	281, 368
Ppu21I	YACGTR	2 cut(s)	1670, 2333
PscI	ACATGT	2 cut(s)	934, 1181
PshAI	GACNNNNGTC	1 cut(s)	1663
PshBI	ATTAAT	1 cut(s)	1479
PsiI	TTATAA	1 cut(s)	1583
Psp124BI	GAGCTC	2 cut(s)	429, 737
Psp1406I	AACGTT	1 cut(s)	2736
PspCI	CACGTG	1 cut(s)	2333
PspN4I	GGNNCC	2 cut(s)	535, 771
PspPI	GGNCC	4 cut(s)	354, 452, 481, 533
PstI	CTGCAG	3 cut(s)	1096, 2536, 2601
RsaI	GTAC	5 cut(s)	1212, 1466, 1672, 2096, 2411
RsaNI	GTAC	5 cut(s)	1211, 1465, 1671, 2095, 2410
RseI	CAYNNNNRTG	4 cut(s)	464, 960, 1265, 2090
Rsr2I	CGGWCCG	1 cut(s)	452
RsrII	CGGWCCG	1 cut(s)	452
SacI	GAGCTC	2 cut(s)	429, 737
SapI	GCTCTTC	1 cut(s)	1714
SaqAI	TTAA	7 cut(s)	318, 795, 1386, 1479, 1496, 2298, 2420
SatI	GCNGC	6 cut(s)	543, 1092, 1814, 2145, 2159, 2250
Sau3AI	GATC	6 cut(s)	411, 456, 474, 1192, 1371, 2570
Sau96I	GGNCC	4 cut(s)	354, 452, 481, 533
SchI	GAGTC	2 cut(s)	281, 369
ScrFI	CCNGG	1 cut(s)	348
SduI	GDGCHC	7 cut(s)	429, 706, 737, 886, 2068, 2122, 2332
SfaNI	GCATC	5 cut(s)	886, 1228, 1919, 2145, 2351
SfcI	CTRYAG	4 cut(s)	1092, 2448, 2532, 2597
SfoI	GGCGCC	1 cut(s)	771
SinI	GGWCC	2 cut(s)	452, 533
SmiMI	CAYNNNNRTG	4 cut(s)	464, 960, 1265, 2090
Sse9I	AATT	9 cut(s)	79, 365, 397, 406, 446, 1863, 1952, 2073, 2562
SsiI	CCGC	8 cut(s)	272, 531, 542, 552, 563, 687, 788, 1813
SspDI	GGCGCC	1 cut(s)	769
SspI	AATATT	3 cut(s)	1159, 1839, 2296
SspMI	CTAG	5 cut(s)	825, 861, 1790, 1970, 2721
SstI	GAGCTC	2 cut(s)	429, 737
StyD4I	CCNGG	1 cut(s)	346
StyI	CCWWGG	2 cut(s)	2052, 2078
TaaI	ACNGT	7 cut(s)	680, 1049, 1630, 1771, 2449, 2518, 2663
TaiI	ACGT	9 cut(s)	1386, 1466, 1667, 1672, 2173, 2207, 2335, 2682, 2739
TaqI	TCGA	7 cut(s)	363, 804, 1195, 1248, 1938, 2122, 2262
TaqII	GACCGA	2 cut(s)	469, 696
TasI	AATT	9 cut(s)	79, 365, 397, 406, 446, 1863, 1952, 2073, 2562
TatI	WGTACW	1 cut(s)	2094
TauI	GCSGC	2 cut(s)	545, 1816
TfiI	GAWTC	4 cut(s)	469, 952, 1612, 2504
Tru1I	TTAA	7 cut(s)	318, 795, 1386, 1479, 1496, 2298, 2420
Tru9I	TTAA	7 cut(s)	318, 795, 1386, 1479, 1496, 2298, 2420
TscAI	CASTG	4 cut(s)	1633, 2319, 2546, 2668
TseFI	GTSAC	6 cut(s)	674, 680, 1039, 1289, 1665, 2047
TseI	GCWGC	4 cut(s)	1091, 2144, 2158, 2249
Tsp45I	GTSAC	6 cut(s)	674, 680, 1039, 1289, 1665, 2047
TspGWI	ACGGA	1 cut(s)	95
TspRI	CASTG	4 cut(s)	1633, 2319, 2546, 2668
VpaK11BI	GGWCC	2 cut(s)	452, 533
VspI	ATTAAT	1 cut(s)	1479
XagI	CCTNNNNNAGG	1 cut(s)	825
XapI	RAATTY	5 cut(s)	79, 365, 397, 1863, 2073
XbaI	TCTAGA	1 cut(s)	824
XceI	RCATGY	4 cut(s)	938, 1185, 2013, 2242
XcmI	CCANNNNNNNNNTGG	1 cut(s)	562
XmiI	GTMKAC	3 cut(s)	939, 2642, 2658
XmnI	GAANNNNTTC	6 cut(s)	386, 1399, 1934, 2087, 2178, 2606
XspI	CTAG	5 cut(s)	825, 861, 1790, 1970, 2721
Zsp2I	ATGCAT	3 cut(s)	879, 1516, 1912

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.