pentatricopeptide repeat-containing protein At5g04810
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04810 AT5G04810 |
| fragaria_vesca | FvH4_7g06690 |
| malus_domestica | MD07G1061700.v1.1 |
| prunus_persica | Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1 Prupe.2G071400_v2.0.a1 |
| pyrus_communis | pycom07g04720 |
| rosa_chinensis | RchiOBHm_Chr1g0336351 |
| rosa_laevigata | RLG00000029372 |
| rosa_multiflora | Rmu_sc0005261.1_g000013 Rmu_sc0005480.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00315730 |
| rosa_rugosa | Rorug01G0125300 |
| rosa_samantha | Rh1AG144500 Rh1BG114100 Rh1CG136000 Rh1DG151200 |
| rosa_wichuraiana | Rw1G011840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1677, 1688 |
| Acc16I | TGCGCA | 1 cut(s) | 857 |
| Acc36I | ACCTGC | 1 cut(s) | 617 |
| AccBSI | CCGCTC | 1 cut(s) | 832 |
| AccI | GTMKAC | 3 cut(s) | 2090, 2514, 2763 |
| AccII | CGCG | 4 cut(s) | 778, 844, 1175, 1302 |
| AciI | CCGC | 8 cut(s) | 54, 105, 205, 683, 778, 832, 1964, 2489 |
| AcsI | RAATTY | 8 cut(s) | 5, 157, 198, 255, 463, 517, 1243, 2178 |
| AcuI | CTGAAG | 4 cut(s) | 441, 1437, 2129, 2580 |
| AcvI | CACGTG | 1 cut(s) | 2438 |
| AfaI | GTAC | 4 cut(s) | 613, 1046, 1732, 2201 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 496, 715, 900, 932, 2061, 2455 |
| AflIII | ACRYGT | 2 cut(s) | 978, 2085 |
| AjiI | CACGTC | 1 cut(s) | 2086 |
| AjnI | CCWGG | 1 cut(s) | 2073 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 470, 502 |
| AleI | CACNNNNGTG | 1 cut(s) | 2195 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2625, 2657 |
| Alw21I | GWGCWC | 4 cut(s) | 991, 1831, 2173, 2732 |
| Alw26I | GTCTC | 3 cut(s) | 1074, 1222, 2334 |
| AoxI | GGCC | 5 cut(s) | 572, 891, 943, 1218, 2071 |
| ApaI | GGGCCC | 1 cut(s) | 576 |
| ApeKI | GCWGC | 5 cut(s) | 662, 1196, 2249, 2263, 2354 |
| ApoI | RAATTY | 8 cut(s) | 5, 157, 198, 255, 463, 517, 1243, 2178 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2795, 2827 |
| AseI | ATTAAT | 2 cut(s) | 285, 2210 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1504, 2711 |
| AspLEI | GCGC | 3 cut(s) | 846, 858, 1304 |
| AspS9I | GGNCC | 3 cut(s) | 572, 573, 2071 |
| AsuHPI | GGTGA | 7 cut(s) | 332, 358, 964, 1156, 2036, 2146, 2246 |
| BaeGI | GKGCMC | 2 cut(s) | 576, 2437 |
| BanII | GRGCYC | 4 cut(s) | 576, 1831, 2227, 2732 |
| BauI | CACGAG | 1 cut(s) | 990 |
| BbrPI | CACGTG | 1 cut(s) | 2438 |
| BbsI | GAAGAC | 3 cut(s) | 1571, 2573, 2714 |
| Bbv12I | GWGCWC | 4 cut(s) | 991, 1831, 2173, 2732 |
| BbvCI | CCTCAGC | 1 cut(s) | 1305 |
| BbvI | GCAGC | 5 cut(s) | 649, 1183, 2236, 2275, 2341 |
| BciT130I | CCWGG | 1 cut(s) | 2075 |
| BciVI | GTATCC | 1 cut(s) | 862 |
| BclI | TGATCA | 1 cut(s) | 1476 |
| BcoDI | GTCTC | 3 cut(s) | 1074, 1222, 2334 |
| BfaI | CTAG | 3 cut(s) | 930, 2081, 2780 |
| BfmI | CTRYAG | 3 cut(s) | 1197, 2637, 2702 |
| BfuAI | ACCTGC | 1 cut(s) | 617 |
| BfuI | GTATCC | 1 cut(s) | 862 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 680 |
| BisI | GCNGC | 6 cut(s) | 205, 663, 1197, 2250, 2264, 2355 |
| BlsI | GCNGC | 6 cut(s) | 206, 664, 1198, 2251, 2265, 2356 |
| BmcAI | AGTACT | 1 cut(s) | 613 |
| Bme1390I | CCNGG | 1 cut(s) | 2075 |
| BmgBI | CACGTC | 1 cut(s) | 2086 |
| BmgT120I | GGNCC | 3 cut(s) | 572, 573, 2071 |
| BmiI | GGNNCC | 2 cut(s) | 278, 574 |
| BmrFI | CCNGG | 1 cut(s) | 2075 |
| BmrI | ACTGGG | 1 cut(s) | 538 |
| BmsI | GCATC | 5 cut(s) | 1333, 1853, 2024, 2250, 2456 |
| BmuI | ACTGGG | 1 cut(s) | 538 |
| BpiI | GAAGAC | 3 cut(s) | 1571, 2573, 2714 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1813, 1845, 2719, 2751 |
| BpmI | CTGGAG | 3 cut(s) | 1833, 2096, 2358 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1305 |
| BpuEI | CTTGAG | 2 cut(s) | 1415, 1853 |
| BsaAI | YACGTR | 1 cut(s) | 2438 |
| BsaJI | CCNNGG | 3 cut(s) | 709, 1515, 2183 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 496, 715, 900, 932, 2061, 2455 |
| Bse118I | RCCGGY | 1 cut(s) | 1544 |
| Bse1I | ACTGG | 6 cut(s) | 533, 824, 890, 1211, 1965, 2651 |
| Bse3DI | GCAATG | 4 cut(s) | 1192, 1402, 2518, 2800 |
| BseBI | CCWGG | 1 cut(s) | 2075 |
| BseDI | CCNNGG | 3 cut(s) | 709, 1515, 2183 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 496, 715, 900, 932, 2061, 2455 |
| BseMI | GCAATG | 4 cut(s) | 1192, 1402, 2518, 2800 |
| BseMII | CTCAG | 4 cut(s) | 28, 606, 864, 1296 |
| BseNI | ACTGG | 6 cut(s) | 533, 824, 890, 1211, 1965, 2651 |
| BseRI | GAGGAG | 9 cut(s) | 73, 82, 85, 88, 91, 169, 760, 782, 948 |
| BseSI | GKGCMC | 2 cut(s) | 576, 2437 |
| BseXI | GCAGC | 5 cut(s) | 649, 1183, 2236, 2275, 2341 |
| Bsh1236I | CGCG | 4 cut(s) | 778, 844, 1175, 1302 |
| Bsh1285I | CGRYCG | 1 cut(s) | 687 |
| BshFI | GGCC | 5 cut(s) | 574, 893, 945, 1220, 2073 |
| BsiEI | CGRYCG | 1 cut(s) | 687 |
| BsiHKAI | GWGCWC | 4 cut(s) | 991, 1831, 2173, 2732 |
| BsiSI | CCGG | 3 cut(s) | 562, 878, 1545 |
| BslFI | GGGAC | 3 cut(s) | 848, 989, 1334 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 496, 715, 900, 932, 2061, 2455 |
| BsmAI | GTCTC | 3 cut(s) | 1074, 1222, 2334 |
| BsmFI | GGGAC | 3 cut(s) | 848, 989, 1334 |
| BsmI | GAATGC | 3 cut(s) | 1694, 1866, 2139 |
| BsnI | GGCC | 5 cut(s) | 574, 893, 945, 1220, 2073 |
| Bsp120I | GGGCCC | 1 cut(s) | 572 |
| Bsp1286I | GDGCHC | 7 cut(s) | 576, 991, 1831, 2173, 2227, 2437, 2732 |
| Bsp1407I | TGTACA | 2 cut(s) | 1044, 2199 |
| Bsp143I | GATC | 2 cut(s) | 1201, 1476 |
| Bsp19I | CCATGG | 1 cut(s) | 709 |
| Bsp68I | TCGCGA | 1 cut(s) | 1175 |
| BspACI | CCGC | 8 cut(s) | 54, 105, 205, 683, 778, 832, 1964, 2489 |
| BspANI | GGCC | 5 cut(s) | 574, 893, 945, 1220, 2073 |
| BspCNI | CTCAG | 4 cut(s) | 27, 607, 865, 1297 |
| BspFNI | CGCG | 4 cut(s) | 778, 844, 1175, 1302 |
| BspHI | TCATGA | 1 cut(s) | 604 |
| BspLI | GGNNCC | 2 cut(s) | 278, 574 |
| BspMAI | CTGCAG | 3 cut(s) | 1201, 2641, 2706 |
| BspMI | ACCTGC | 1 cut(s) | 617 |
| BspQI | GCTCTTC | 1 cut(s) | 1819 |
| BsrBI | CCGCTC | 1 cut(s) | 832 |
| BsrDI | GCAATG | 4 cut(s) | 1192, 1402, 2518, 2800 |
| BsrFI | RCCGGY | 1 cut(s) | 1544 |
| BsrGI | TGTACA | 2 cut(s) | 1044, 2199 |
| BsrI | ACTGG | 6 cut(s) | 533, 824, 890, 1211, 1965, 2651 |
| BssAI | RCCGGY | 1 cut(s) | 1544 |
| BssECI | CCNNGG | 3 cut(s) | 709, 1515, 2183 |
| BssMI | GATC | 2 cut(s) | 1201, 1476 |
| BssNAI | GTATAC | 2 cut(s) | 2091, 2515 |
| BssSI | CACGAG | 1 cut(s) | 990 |
| BssT1I | CCWWGG | 3 cut(s) | 709, 1515, 2183 |
| Bst1107I | GTATAC | 2 cut(s) | 2091, 2515 |
| Bst2BI | CACGAG | 1 cut(s) | 990 |
| Bst2UI | CCWGG | 1 cut(s) | 2075 |
| Bst4CI | ACNGT | 8 cut(s) | 611, 727, 1154, 1721, 1735, 1876, 2554, 2768 |
| Bst6I | CTCTTC | 3 cut(s) | 1116, 1819, 2224 |
| BstAUI | TGTACA | 2 cut(s) | 1044, 2199 |
| BstBAI | YACGTR | 1 cut(s) | 2438 |
| BstDEI | CTNAG | 5 cut(s) | 14, 615, 666, 873, 1305 |
| BstDSI | CCRYGG | 1 cut(s) | 709 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 930 |
| BstFNI | CGCG | 4 cut(s) | 778, 844, 1175, 1302 |
| BstHHI | GCGC | 3 cut(s) | 846, 858, 1304 |
| BstKTI | GATC | 2 cut(s) | 1204, 1479 |
| BstMAI | GTCTC | 3 cut(s) | 1074, 1222, 2334 |
| BstMBI | GATC | 2 cut(s) | 1201, 1476 |
| BstMCI | CGRYCG | 1 cut(s) | 687 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 571, 671, 680, 829, 1036, 1196, 2127, 2555 |
| BstNI | CCWGG | 1 cut(s) | 2075 |
| BstNSI | RCATGY | 6 cut(s) | 982, 1012, 1043, 1290, 2118, 2347 |
| BstSCI | CCNGG | 1 cut(s) | 2073 |
| BstSFI | CTRYAG | 3 cut(s) | 1197, 2637, 2702 |
| BstSLI | GKGCMC | 2 cut(s) | 576, 2437 |
| BstUI | CGCG | 4 cut(s) | 778, 844, 1175, 1302 |
| BstV1I | GCAGC | 5 cut(s) | 649, 1183, 2236, 2275, 2341 |
| BstV2I | GAAGAC | 3 cut(s) | 1571, 2573, 2714 |
| BstZ17I | GTATAC | 2 cut(s) | 2091, 2515 |
| BsuI | GTATCC | 1 cut(s) | 862 |
| BsuRI | GGCC | 5 cut(s) | 574, 893, 945, 1220, 2073 |
| BtgI | CCRYGG | 1 cut(s) | 709 |
| BtrI | CACGTC | 1 cut(s) | 2086 |
| BtsI | GCAGTG | 1 cut(s) | 149 |
| BtsIMutI | CAGTG | 7 cut(s) | 149, 348, 1204, 1872, 1958, 2644, 2773 |
| BtuMI | TCGCGA | 1 cut(s) | 1175 |
| BveI | ACCTGC | 1 cut(s) | 617 |
| CciI | TCATGA | 1 cut(s) | 604 |
| CfoI | GCGC | 3 cut(s) | 846, 858, 1304 |
| Cfr10I | RCCGGY | 1 cut(s) | 1544 |
| Cfr13I | GGNCC | 3 cut(s) | 572, 573, 2071 |
| CseI | GACGC | 1 cut(s) | 784 |
| Csp6I | GTAC | 4 cut(s) | 612, 1045, 1731, 2200 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1420, 1455 |
| CviQI | GTAC | 4 cut(s) | 612, 1045, 1731, 2200 |
| DdeI | CTNAG | 5 cut(s) | 14, 615, 666, 873, 1305 |
| DpnI | GATC | 2 cut(s) | 1203, 1478 |
| DpnII | GATC | 2 cut(s) | 1201, 1476 |
| Eam1104I | CTCTTC | 3 cut(s) | 1116, 1819, 2224 |
| EarI | CTCTTC | 3 cut(s) | 1116, 1819, 2224 |
| EciI | GGCGGA | 2 cut(s) | 43, 94 |
| Ecl136II | GAGCTC | 2 cut(s) | 1829, 2730 |
| Eco130I | CCWWGG | 3 cut(s) | 709, 1515, 2183 |
| Eco24I | GRGCYC | 4 cut(s) | 576, 1831, 2227, 2732 |
| Eco32I | GATATC | 1 cut(s) | 2296 |
| Eco53kI | GAGCTC | 2 cut(s) | 1829, 2730 |
| Eco57I | CTGAAG | 4 cut(s) | 441, 1437, 2129, 2580 |
| Eco72I | CACGTG | 1 cut(s) | 2438 |
| EcoICRI | GAGCTC | 2 cut(s) | 1829, 2730 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 930 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2071 |
| EcoRI | GAATTC | 3 cut(s) | 5, 463, 1243 |
| EcoRII | CCWGG | 1 cut(s) | 2073 |
| EcoRV | GATATC | 1 cut(s) | 2296 |
| EcoT14I | CCWWGG | 3 cut(s) | 709, 1515, 2183 |
| EcoT22I | ATGCAT | 4 cut(s) | 1621, 1868, 2007, 2017 |
| EcoT38I | GRGCYC | 4 cut(s) | 576, 1831, 2227, 2732 |
| ErhI | CCWWGG | 3 cut(s) | 709, 1515, 2183 |
| FaqI | GGGAC | 3 cut(s) | 848, 989, 1334 |
| FauI | CCCGC | 3 cut(s) | 825, 1957, 2482 |
| FbaI | TGATCA | 1 cut(s) | 1476 |
| FblI | GTMKAC | 3 cut(s) | 2090, 2514, 2763 |
| Fnu4HI | GCNGC | 6 cut(s) | 205, 663, 1197, 2250, 2264, 2355 |
| FriOI | GRGCYC | 4 cut(s) | 576, 1831, 2227, 2732 |
| Fsp4HI | GCNGC | 6 cut(s) | 205, 663, 1197, 2250, 2264, 2355 |
| FspBI | CTAG | 3 cut(s) | 930, 2081, 2780 |
| FspI | TGCGCA | 1 cut(s) | 857 |
| GlaI | GCGC | 3 cut(s) | 845, 857, 1303 |
| GluI | GCNGC | 6 cut(s) | 205, 663, 1197, 2250, 2264, 2355 |
| GsuI | CTGGAG | 3 cut(s) | 1833, 2096, 2358 |
| HaeIII | GGCC | 5 cut(s) | 574, 893, 945, 1220, 2073 |
| HapII | CCGG | 3 cut(s) | 562, 878, 1545 |
| HgaI | GACGC | 1 cut(s) | 784 |
| HhaI | GCGC | 3 cut(s) | 846, 858, 1304 |
| Hin6I | GCGC | 3 cut(s) | 844, 856, 1302 |
| HinP1I | GCGC | 3 cut(s) | 844, 856, 1302 |
| HindIII | AAGCTT | 1 cut(s) | 2562 |
| HinfI | GANTC | 6 cut(s) | 589, 1170, 1297, 1428, 1538, 2609 |
| HpaII | CCGG | 3 cut(s) | 562, 878, 1545 |
| HphI | GGTGA | 7 cut(s) | 332, 358, 964, 1156, 2036, 2146, 2246 |
| Hpy166II | GTNNAC | 9 cut(s) | 321, 1045, 1047, 1446, 2091, 2200, 2515, 2644, 2764 |
| Hpy188I | TCNGA | 7 cut(s) | 163, 469, 594, 723, 1476, 2758, 2858 |
| Hpy188III | TCNNGA | 9 cut(s) | 419, 431, 535, 605, 930, 992, 1174, 1832, 2720 |
| Hpy8I | GTNNAC | 9 cut(s) | 321, 1045, 1047, 1446, 2091, 2200, 2515, 2644, 2764 |
| Hpy99I | CGWCG | 2 cut(s) | 800, 1039 |
| HpyCH4III | ACNGT | 8 cut(s) | 611, 727, 1154, 1721, 1735, 1876, 2554, 2768 |
| HpyCH4IV | ACGT | 6 cut(s) | 1034, 1560, 2085, 2417, 2437, 2760 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 571, 671, 680, 829, 1036, 1196, 2127, 2555 |
| HpyF3I | CTNAG | 5 cut(s) | 14, 615, 666, 873, 1305 |
| HpySE526I | ACGT | 6 cut(s) | 1034, 1560, 2085, 2417, 2437, 2760 |
| HspAI | GCGC | 3 cut(s) | 844, 856, 1302 |
| KroI | GCCGGC | 1 cut(s) | 1544 |
| KroNI | GCCGGC | 1 cut(s) | 1546 |
| Ksp22I | TGATCA | 1 cut(s) | 1476 |
| Kzo9I | GATC | 2 cut(s) | 1201, 1476 |
| LguI | GCTCTTC | 1 cut(s) | 1819 |
| LmnI | GCTCC | 4 cut(s) | 182, 1351, 2077, 2727 |
| Lsp1109I | GCAGC | 5 cut(s) | 649, 1183, 2236, 2275, 2341 |
| LweI | GCATC | 5 cut(s) | 1333, 1853, 2024, 2250, 2456 |
| MaeI | CTAG | 3 cut(s) | 930, 2081, 2780 |
| MaeII | ACGT | 6 cut(s) | 1034, 1560, 2085, 2417, 2437, 2760 |
| MaeIII | GTNAC | 4 cut(s) | 1144, 1709, 2024, 2152 |
| MalI | GATC | 2 cut(s) | 1203, 1478 |
| MbiI | CCGCTC | 1 cut(s) | 832 |
| MboI | GATC | 2 cut(s) | 1201, 1476 |
| MfeI | CAATTG | 1 cut(s) | 2364 |
| MhlI | GDGCHC | 7 cut(s) | 576, 991, 1831, 2173, 2227, 2437, 2732 |
| MlyI | GAGTC | 1 cut(s) | 1422 |
| MmeI | TCCRAC | 1 cut(s) | 216 |
| Mph1103I | ATGCAT | 4 cut(s) | 1621, 1868, 2007, 2017 |
| MroNI | GCCGGC | 1 cut(s) | 1544 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1504, 2711 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1065, 1099, 1370, 2010, 2195 |
| MspI | CCGG | 3 cut(s) | 562, 878, 1545 |
| MspR9I | CCNGG | 1 cut(s) | 2075 |
| MunI | CAATTG | 1 cut(s) | 2364 |
| Mva1269I | GAATGC | 3 cut(s) | 1694, 1866, 2139 |
| MvaI | CCWGG | 1 cut(s) | 2075 |
| MvnI | CGCG | 4 cut(s) | 778, 844, 1175, 1302 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 571, 671, 680, 829, 1036, 1196, 2127, 2555 |
| NaeI | GCCGGC | 1 cut(s) | 1546 |
| NcoI | CCATGG | 1 cut(s) | 709 |
| NdeII | GATC | 2 cut(s) | 1201, 1476 |
| NgoMIV | GCCGGC | 1 cut(s) | 1544 |
| NlaIV | GGNNCC | 2 cut(s) | 278, 574 |
| NmuCI | GTSAC | 3 cut(s) | 1144, 2024, 2152 |
| NruI | TCGCGA | 1 cut(s) | 1175 |
| NsbI | TGCGCA | 1 cut(s) | 857 |
| NsiI | ATGCAT | 4 cut(s) | 1621, 1868, 2007, 2017 |
| NspI | RCATGY | 6 cut(s) | 982, 1012, 1043, 1290, 2118, 2347 |
| OliI | CACNNNNGTG | 1 cut(s) | 2195 |
| PaeI | GCATGC | 1 cut(s) | 1012 |
| PagI | TCATGA | 1 cut(s) | 604 |
| PciI | ACATGT | 1 cut(s) | 978 |
| PciSI | GCTCTTC | 1 cut(s) | 1819 |
| PctI | GAATGC | 3 cut(s) | 1694, 1866, 2139 |
| PdiI | GCCGGC | 1 cut(s) | 1546 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1504, 2711 |
| PfeI | GAWTC | 5 cut(s) | 589, 1170, 1297, 1538, 2609 |
| PflFI | GACNNNGTC | 1 cut(s) | 1667 |
| PkrI | GCNGC | 6 cut(s) | 206, 664, 1198, 2251, 2265, 2356 |
| PleI | GAGTC | 1 cut(s) | 1422 |
| PmaCI | CACGTG | 1 cut(s) | 2438 |
| PmlI | CACGTG | 1 cut(s) | 2438 |
| PpsI | GAGTC | 1 cut(s) | 1422 |
| Ppu21I | YACGTR | 1 cut(s) | 2438 |
| PscI | ACATGT | 1 cut(s) | 978 |
| PshBI | ATTAAT | 2 cut(s) | 285, 2210 |
| PsiI | TTATAA | 2 cut(s) | 1677, 1688 |
| Psp124BI | GAGCTC | 2 cut(s) | 1831, 2732 |
| Psp6I | CCWGG | 1 cut(s) | 2073 |
| PspCI | CACGTG | 1 cut(s) | 2438 |
| PspGI | CCWGG | 1 cut(s) | 2073 |
| PspN4I | GGNNCC | 2 cut(s) | 278, 574 |
| PspOMI | GGGCCC | 1 cut(s) | 572 |
| PspPI | GGNCC | 3 cut(s) | 572, 573, 2071 |
| PstI | CTGCAG | 3 cut(s) | 1201, 2641, 2706 |
| PsyI | GACNNNGTC | 1 cut(s) | 1667 |
| RruI | TCGCGA | 1 cut(s) | 1175 |
| RsaI | GTAC | 4 cut(s) | 613, 1046, 1732, 2201 |
| RsaNI | GTAC | 4 cut(s) | 612, 1045, 1731, 2200 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1065, 1099, 1370, 2010, 2195 |
| SacI | GAGCTC | 2 cut(s) | 1831, 2732 |
| SapI | GCTCTTC | 1 cut(s) | 1819 |
| SatI | GCNGC | 6 cut(s) | 205, 663, 1197, 2250, 2264, 2355 |
| Sau3AI | GATC | 2 cut(s) | 1201, 1476 |
| Sau96I | GGNCC | 3 cut(s) | 572, 573, 2071 |
| ScaI | AGTACT | 1 cut(s) | 613 |
| SchI | GAGTC | 1 cut(s) | 1422 |
| ScrFI | CCNGG | 1 cut(s) | 2075 |
| SduI | GDGCHC | 7 cut(s) | 576, 991, 1831, 2173, 2227, 2437, 2732 |
| SfaNI | GCATC | 5 cut(s) | 1333, 1853, 2024, 2250, 2456 |
| SfcI | CTRYAG | 3 cut(s) | 1197, 2637, 2702 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1065, 1099, 1370, 2010, 2195 |
| SmlI | CTYRAG | 2 cut(s) | 1430, 1832 |
| SmoI | CTYRAG | 2 cut(s) | 1430, 1832 |
| SphI | GCATGC | 1 cut(s) | 1012 |
| SsiI | CCGC | 8 cut(s) | 54, 105, 205, 683, 778, 832, 1964, 2489 |
| SspI | AATATT | 2 cut(s) | 1264, 1944 |
| SspMI | CTAG | 3 cut(s) | 930, 2081, 2780 |
| SstI | GAGCTC | 2 cut(s) | 1831, 2732 |
| StyD4I | CCNGG | 1 cut(s) | 2073 |
| StyI | CCWWGG | 3 cut(s) | 709, 1515, 2183 |
| TaaI | ACNGT | 8 cut(s) | 611, 727, 1154, 1721, 1735, 1876, 2554, 2768 |
| TaiI | ACGT | 6 cut(s) | 1037, 1563, 2088, 2420, 2440, 2763 |
| TaqI | TCGA | 8 cut(s) | 430, 656, 687, 693, 1842, 2227, 2651, 2846 |
| TatI | WGTACW | 3 cut(s) | 611, 1044, 2199 |
| TauI | GCSGC | 1 cut(s) | 207 |
| TfiI | GAWTC | 5 cut(s) | 589, 1170, 1297, 1538, 2609 |
| TscAI | CASTG | 7 cut(s) | 156, 355, 1211, 1879, 1965, 2651, 2773 |
| TseFI | GTSAC | 3 cut(s) | 1144, 2024, 2152 |
| TseI | GCWGC | 5 cut(s) | 662, 1196, 2249, 2263, 2354 |
| Tsp45I | GTSAC | 3 cut(s) | 1144, 2024, 2152 |
| TspGWI | ACGGA | 1 cut(s) | 1789 |
| TspRI | CASTG | 7 cut(s) | 156, 355, 1211, 1879, 1965, 2651, 2773 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1667 |
| VspI | ATTAAT | 2 cut(s) | 285, 2210 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 930 |
| XapI | RAATTY | 8 cut(s) | 5, 157, 198, 255, 463, 517, 1243, 2178 |
| XbaI | TCTAGA | 1 cut(s) | 929 |
| XceI | RCATGY | 6 cut(s) | 982, 1012, 1043, 1290, 2118, 2347 |
| XmiI | GTMKAC | 3 cut(s) | 2090, 2514, 2763 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1504, 2711 |
| XspI | CTAG | 3 cut(s) | 930, 2081, 2780 |
| ZrmI | AGTACT | 1 cut(s) | 613 |
| Zsp2I | ATGCAT | 4 cut(s) | 1621, 1868, 2007, 2017 |