Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010326

Physical Location & Seq

Genomic Coordinates Reverse (-)

1690571 .. 1695557

Gene Structure 4987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G05660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGACTAATATGGCCGGAACCGCCACCACCGAGTTCCGGTGGAAATCACCACCACAGCCTCCGTCACAAGAGCAACCCATTTCAGATTCAGATTCAGACTCCGGATCTGATTCAGAGAATCATCAGCACCGTCACAATGATCTATCAAACTCCATCTTCGAAGCTTACCTCGATTGCCACTCATCTTCGTCCCCTTCCTCAATCGATCTCGCTAAGATCCAATCTTTTCTCGCCTCGTCTTCTTCCGGTGCTGTCTCGTGCCTTATCTGTCTCGAACGCATTAAACGAACCGATCCTACATGGTCCTGCACTTCCTCATGCTTCGCCGTCTTTCACCTTTTCTGCATTCAATCATGGGCTCGTCAGTGCTTAGATCTACAAGCCGCGCGTGCAGTCACGCGACCTTCTTCGAATCCGACAGAACCGGAAGCTGTCTGGAACTGTCCGAAATGTAGATCGTCGTATCAGAAATCGAAGATTCCAAGGCGGTACCTTTGTTACTGCGGCAAGGAAGAGGATCCTCCGGCGGATAATCCATGGATCTTGCCTCATTCTTGCGGCGAGGTCTGCGAGAGGCCGTTGAGCAACAATTGTGGTCACTGTTGCTTACTCTTGTGTCACCCTGGACCTTGTGCTTCTTGTCCCAAGCTCGTGAAAGCTAAATGCTTCTGCGGCGGTGTTGAAGATGTTCGTCGATGTGGACACAAGCAATTCTCTTGCGGAGATGTCTGTGAGAGAGTCCTGGATTGTAATATCCATAACTGTAGGGAGATTTGTCATGATGGCGAGTGTCCACCTTGCAGGGAGCGCGCGGTTTACAAGTGCTCTTGTGGTAAAGTGAAGGAGGAGAAGGATTGCTGCGAGAGAGTCTTTAGGTGTGAGGCTTCTTGCGAGAATATGCTTAATTGCGGGAAACATGTATGCGAGAGAGGATGCCACGCGGGAGAATGTGGATTGTGTCCATATCAGGGGAAGAGGAGTTGTCCCTGTGGCAAGAGATTCTACCAAGGCTTGTCTTGTGATGTTGTGGCGCCTTTATGTGGTGGCACTTGTGATAAAGTTCTTGGTTGTGGCTACCATAGGTGTCCAGAGAGGTGCCACCGCGGTCCGTGCCTTGAGACTTGCAGGATTGTAGTTACCAAGTCTTGCAGGTGCGGAGTAACGAAAAAACAGGTTCCTTGCCATCAAGAGTTGGCGTGTGAGAGGAAATGCCAGAGAGTGAGAGATTGTGCACGTCATGCTTGTAGACGCCGATGTTGTGATGGTGAATGTCCACCATGCTCAGAGATTTGTGGAAAAAAGCTCCGTTGCAGGAATCATAAATGCCAGTCTCCTTGTCACCAAGGTCCATGTGCTCCTTGTCCAATAATGGTAACAATATCTTGTGCTTGTGGTGAGACACATTTTGAGGTACCCTGTGGCACTGAAACAAATCAGAAACCTCCTAGATGCCGTAAATTATGCCACATAACCCCATTGTGCAGACATGGGCAAAACCAAAAGCCTCATAAATGCCACTATGGAGCTTGTCCTCCATGTCGACTCCTTTGTGATGAAGAATACCCATGTGGGCACAAGTGCAAACTAAGGTGTCATGGACCTAGACCTCCTCCTAACCGTGAATTTATACTGAAACCAACGAAAAAGATGTTGCATATTCAGGCTGAATCTACACCGGGTTCTCCCTGCCCTCGTTGTCCAGAGCCTGTCTGGAGGCCCTGTGTAGGCCACCACCTGGCAGCAGAGAAAAGGATGATTTGCTCTGACAGAACTCAATTTGCATGCGATAATTTATGTGGAAACCCTCTTCCATGTGGGAACCATTACTGTTCGTATTTCTGTCATGCCCTGGATATAAGAAGTTCATCATTGGATAAAAGAAGTGAGTCCTGTGAAAAGTGTGATCTCCGCTGTCAAAAGGAGAGAACACCACGATGCCAACATCCATGTCCTCGGCGATGCCATCCTGAAGATTGTCCACCTTGCAAAACTCTAGTAAAGAGATCATGTCACTGTGGCGCGATGGTGCATGCATTCGAGTGCATATACTACAATACAATGTCGGAGAAGGACCAAATGAAGGCGCGCTCATGCCGTGGACCTTGTCACAGAAAATTGCCAAACTGTACCCATTTGTGTCCGGAGATATGTCATCCTGGGCAGTGTCCATTGCCAGAGAAGTGTGGTAAAAAGGTGGTTGTTCGTTGCAAGTGCCTAACCTTGAAGAAAGAATGGGTATGCCAGGATGTTCAAGCAGCCCATAGGGCCACAGGTTCTGATCCTAAAGAAGTACCAAAGAACCAGTTCGGGGTTGGCCTCCTCCCTTGTGATTCCAACTGTAAGAGCAAACTACAGGTGGCTGAATCGGTGTTAACACAGCGCAATGTCAAAGAGATTGAGGAGAAGGAGGAGCCTAGCGGGAAAAATGCATCAAAGCGAAGGAAAAGGCGTGGACGGGGTCAGGACATTCAGGAGACCACAAGGCTGCAGAAACTTGCTGTCACCACAAAGAGGATACTGATGGTCGTGATGTTAGTGGCGATGCTAGCTGCTGTTTCATACTATGGCTATAAGGGACTCTTGTGGCTTTCAGATTGGATGAATGAAGTCGAAGAACAAAGACAAAAGTCTAGAAGATACCCTCGAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000976 GO:0000977 GO:0000981 GO:0000982 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010310 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051193 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-NF-X1

Protein Analysis

883

Amino Acids

99.23

Weight (kDa)

8.73

Isoelectric Point (pI)

68.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05660
fragaria_vesca	FvH4_7g24480
malus_domestica	MD00G1166700.v1.1 MD07G1222000.v1.1
prunus_persica	Prupe.2G250200_v2.0.a1
pyrus_communis	pycom07g20050
rosa_chinensis	RchiOBHm_Chr1g0370241
rosa_laevigata	RLG00000027066
rosa_multiflora	Rmu_co8251429.1_g000001 Rmu_co8258023.1_g000001 Rmu_sc0018500.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286720 Rroxscaffold_4G00287290
rosa_rugosa	Rorug01G0354900 Rorug01G0355000 Rorug01G0355100
rosa_samantha	Rh1AG363700 Rh1BG326800 Rh1CG340100 Rh1DG357200
rosa_wichuraiana	Rw1G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1140
Acc36I	ACCTGC	1 cut(s)	1140
Acc65I	GGTACC	2 cut(s)	489, 1411
AccB1I	GGYRCC	4 cut(s)	489, 1030, 1095, 1411
AccB7I	CCANNNNNTGG	1 cut(s)	1735
AccI	GTMKAC	2 cut(s)	1246, 1540
AccII	CGCG	9 cut(s)	386, 388, 400, 810, 812, 941, 1104, 2021, 2086
AccIII	TCCGGA	2 cut(s)	101, 2140
AclWI	GGATC	7 cut(s)	112, 211, 287, 512, 525, 548, 2273
AcoI	YGGCCR	1 cut(s)	12
AcsI	RAATTY	1 cut(s)	1622
AcuI	CTGAAG	1 cut(s)	1989
AcyI	GRCGYC	2 cut(s)	1031, 1249
AfaI	GTAC	4 cut(s)	491, 1413, 2128, 2292
AfiI	CCNNNNNNNGG	8 cut(s)	36, 968, 1040, 1724, 1735, 2080, 2308, 2511
AflIII	ACRYGT	1 cut(s)	916
AgsI	TTSAA	4 cut(s)	350, 683, 2224, 2252
AjiI	CACGTC	1 cut(s)	1235
AjnI	CCWGG	6 cut(s)	622, 741, 1734, 1848, 2155, 2241
AluBI	AGCT	7 cut(s)	164, 431, 649, 659, 1303, 1526, 2549
AluI	AGCT	7 cut(s)	164, 431, 649, 659, 1303, 1526, 2549
Alw21I	GWGCWC	3 cut(s)	827, 1234, 1357
Alw26I	GTCTC	6 cut(s)	259, 275, 1112, 1335, 1391, 2468
Alw44I	GTGCAC	1 cut(s)	1230
AlwI	GGATC	7 cut(s)	112, 211, 287, 512, 525, 548, 2273
AlwNI	CAGNNNCTG	2 cut(s)	1706, 2276
Aor13HI	TCCGGA	2 cut(s)	101, 2140
AoxI	GGCC	6 cut(s)	12, 575, 1715, 1726, 2265, 2314
ApaLI	GTGCAC	1 cut(s)	1230
ApeKI	GCWGC	5 cut(s)	858, 1739, 2255, 2485, 2549
ApoI	RAATTY	1 cut(s)	1622
Asp700I	GAANNNNTTC	2 cut(s)	687, 2303
Asp718I	GGTACC	2 cut(s)	489, 1411
AspLEI	GCGC	8 cut(s)	388, 810, 812, 1033, 2021, 2086, 2088, 2382
AspS9I	GGNCC	9 cut(s)	303, 626, 1106, 1346, 1598, 1716, 2071, 2099, 2265
AsuC2I	CCSGG	1 cut(s)	1677
AsuHPI	GGTGA	7 cut(s)	39, 326, 611, 1277, 1331, 1406, 2494
AsuII	TTCGAA	2 cut(s)	159, 410
AsuNHI	GCTAGC	1 cut(s)	2545
AvaII	GGWCC	7 cut(s)	303, 626, 1106, 1346, 1598, 2071, 2099
BaeGI	GKGCMC	2 cut(s)	1234, 1575
BaeI	ACNNNNGTAYC	2 cut(s)	481, 514
BamHI	GGATCC	1 cut(s)	517
BanI	GGYRCC	4 cut(s)	489, 1030, 1095, 1411
BanII	GRGCYC	1 cut(s)	361
BauI	CACGAG	2 cut(s)	256, 650
BbsI	GAAGAC	1 cut(s)	231
Bbv12I	GWGCWC	3 cut(s)	827, 1234, 1357
BbvI	GCAGC	5 cut(s)	845, 1751, 2267, 2472, 2536
BccI	CCATC	7 cut(s)	161, 776, 1191, 1256, 1971, 2017, 2515
BceAI	ACGGC	4 cut(s)	311, 562, 1437, 2079
BciT130I	CCWGG	6 cut(s)	624, 743, 1736, 1850, 2157, 2243
BciVI	GTATCC	1 cut(s)	2508
BcnI	CCSGG	1 cut(s)	1677
BcoDI	GTCTC	6 cut(s)	259, 275, 1112, 1335, 1391, 2468
BfaI	CTAG	6 cut(s)	1446, 1602, 1994, 2415, 2546, 2631
BfmI	CTRYAG	3 cut(s)	763, 2351, 2486
BfoI	RGCGCY	1 cut(s)	1034
BfuAI	ACCTGC	1 cut(s)	1140
BfuI	GTATCC	1 cut(s)	2508
BglI	GCCNNNNNGGC	1 cut(s)	2264
BglII	AGATCT	1 cut(s)	373
BisI	GCNGC	9 cut(s)	384, 505, 559, 673, 859, 1740, 2256, 2486, 2550
BlsI	GCNGC	9 cut(s)	385, 506, 560, 674, 860, 1741, 2257, 2487, 2551
Bme1390I	CCNGG	7 cut(s)	624, 743, 1677, 1736, 1850, 2157, 2243
Bme18I	GGWCC	7 cut(s)	303, 626, 1106, 1346, 1598, 2071, 2099
BmgBI	CACGTC	1 cut(s)	1235
BmgT120I	GGNCC	9 cut(s)	303, 626, 1106, 1346, 1598, 1716, 2071, 2099, 2265
BmiI	GGNNCC	9 cut(s)	19, 491, 519, 1032, 1097, 1176, 1413, 1820, 2412
BmrFI	CCNGG	7 cut(s)	624, 743, 1677, 1736, 1850, 2157, 2243
BmsI	GCATC	6 cut(s)	923, 1439, 1925, 1949, 2438, 2532
BmtI	GCTAGC	1 cut(s)	2549
BoxI	GACNNNNGTC	1 cut(s)	2626
BpiI	GAAGAC	1 cut(s)	231
BpmI	CTGGAG	1 cut(s)	1732
Bpu14I	TTCGAA	2 cut(s)	159, 410
BpuEI	CTTGAG	1 cut(s)	1136
BpuMI	CCSGG	1 cut(s)	1677
Bsa29I	ATCGAT	1 cut(s)	204
BsaHI	GRCGYC	2 cut(s)	1031, 1249
BsaI	GGTCTC	1 cut(s)	2468
BsaWI	WCCGGW	5 cut(s)	36, 101, 245, 424, 2140
BsaXI	ACNNNNNCTCC	2 cut(s)	1705, 1735
Bsc4I	CCNNNNNNNGG	8 cut(s)	36, 968, 1040, 1724, 1735, 2080, 2308, 2511
Bse1I	ACTGG	2 cut(s)	1327, 2302
Bse3DI	GCAATG	2 cut(s)	2168, 2389
BseAI	TCCGGA	2 cut(s)	101, 2140
BseBI	CCWGG	6 cut(s)	624, 743, 1736, 1850, 2157, 2243
BseCI	ATCGAT	1 cut(s)	204
BseGI	GGATG	7 cut(s)	938, 1758, 1942, 1963, 2152, 2251, 2604
BseLI	CCNNNNNNNGG	8 cut(s)	36, 968, 1040, 1724, 1735, 2080, 2308, 2511
BseMI	GCAATG	2 cut(s)	2168, 2389
BseMII	CTCAG	1 cut(s)	1296
BseNI	ACTGG	2 cut(s)	1327, 2302
BsePI	GCGCGC	2 cut(s)	808, 2084
BseRI	GAGGAG	6 cut(s)	860, 991, 1599, 2309, 2414, 2423
BseSI	GKGCMC	2 cut(s)	1234, 1575
BseXI	GCAGC	5 cut(s)	845, 1751, 2267, 2472, 2536
BsgI	GTGCAG	3 cut(s)	292, 411, 1501
Bsh1236I	CGCG	9 cut(s)	386, 388, 400, 810, 812, 941, 1104, 2021, 2086
BshFI	GGCC	6 cut(s)	14, 577, 1717, 1728, 2267, 2316
BshNI	GGYRCC	4 cut(s)	489, 1030, 1095, 1411
BshVI	ATCGAT	1 cut(s)	204
BsiHKAI	GWGCWC	3 cut(s)	827, 1234, 1357
BsiSI	CCGG	8 cut(s)	15, 37, 102, 246, 425, 524, 1676, 2141
BslFI	GGGAC	4 cut(s)	175, 627, 969, 2589
BslI	CCNNNNNNNGG	8 cut(s)	36, 968, 1040, 1724, 1735, 2080, 2308, 2511
BsmAI	GTCTC	6 cut(s)	259, 275, 1112, 1335, 1391, 2468
BsmFI	GGGAC	4 cut(s)	175, 627, 969, 2589
BsmI	GAATGC	2 cut(s)	345, 2033
BsnI	GGCC	6 cut(s)	14, 577, 1717, 1728, 2267, 2316
Bso31I	GGTCTC	1 cut(s)	2468
Bsp119I	TTCGAA	2 cut(s)	159, 410
Bsp1286I	GDGCHC	5 cut(s)	361, 827, 1234, 1357, 1575
Bsp13I	TCCGGA	2 cut(s)	101, 2140
Bsp19I	CCATGG	1 cut(s)	536
BspANI	GGCC	6 cut(s)	14, 577, 1717, 1728, 2267, 2316
BspCNI	CTCAG	1 cut(s)	1295
BspDI	ATCGAT	1 cut(s)	204
BspEI	TCCGGA	2 cut(s)	101, 2140
BspFNI	CGCG	9 cut(s)	386, 388, 400, 810, 812, 941, 1104, 2021, 2086
BspHI	TCATGA	1 cut(s)	778
BspLI	GGNNCC	9 cut(s)	19, 491, 519, 1032, 1097, 1176, 1413, 1820, 2412
BspMAI	CTGCAG	1 cut(s)	2490
BspMI	ACCTGC	1 cut(s)	1140
BspOI	GCTAGC	1 cut(s)	2549
BspPI	GGATC	7 cut(s)	112, 211, 287, 512, 525, 548, 2273
BspT104I	TTCGAA	2 cut(s)	159, 410
BspT107I	GGYRCC	4 cut(s)	489, 1030, 1095, 1411
BspTNI	GGTCTC	1 cut(s)	2468
BsrDI	GCAATG	2 cut(s)	2168, 2389
BsrI	ACTGG	2 cut(s)	1327, 2302
BssHII	GCGCGC	2 cut(s)	808, 2084
BssNI	GRCGYC	2 cut(s)	1031, 1249
BssSI	CACGAG	2 cut(s)	256, 650
BssT1I	CCWWGG	4 cut(s)	482, 536, 1006, 1342
Bst2BI	CACGAG	2 cut(s)	256, 650
Bst2UI	CCWGG	6 cut(s)	624, 743, 1736, 1850, 2157, 2243
Bst4CI	ACNGT	9 cut(s)	131, 443, 602, 764, 1619, 1829, 2015, 2126, 2339
Bst6I	CTCTTC	3 cut(s)	507, 968, 1812
BstACI	GRCGYC	2 cut(s)	1031, 1249
BstAPI	GCANNNNNTGC	1 cut(s)	1238
BstBI	TTCGAA	2 cut(s)	159, 410
BstC8I	GCNNGC	6 cut(s)	390, 810, 1783, 2031, 2086, 2547
BstDEI	CTNAG	4 cut(s)	213, 370, 1282, 1586
BstDSI	CCRYGG	3 cut(s)	536, 1102, 2095
BstF5I	GGATG	7 cut(s)	938, 1758, 1942, 1963, 2152, 2251, 2604
BstFNI	CGCG	9 cut(s)	386, 388, 400, 810, 812, 941, 1104, 2021, 2086
BstH2I	RGCGCY	1 cut(s)	1034
BstHHI	GCGC	8 cut(s)	388, 810, 812, 1033, 2021, 2086, 2088, 2382
BstMAI	GTCTC	6 cut(s)	259, 275, 1112, 1335, 1391, 2468
BstMWI	GCNNNNNNNGC	9 cut(s)	20, 389, 567, 672, 807, 1110, 1238, 2264, 2546
BstNI	CCWGG	6 cut(s)	624, 743, 1736, 1850, 2157, 2243
BstNSI	RCATGY	3 cut(s)	920, 1785, 2033
BstPAI	GACNNNNGTC	1 cut(s)	2626
BstSCI	CCNGG	7 cut(s)	622, 741, 1675, 1734, 1848, 2155, 2241
BstSFI	CTRYAG	3 cut(s)	763, 2351, 2486
BstSLI	GKGCMC	2 cut(s)	1234, 1575
BstUI	CGCG	9 cut(s)	386, 388, 400, 810, 812, 941, 1104, 2021, 2086
BstV1I	GCAGC	5 cut(s)	845, 1751, 2267, 2472, 2536
BstV2I	GAAGAC	1 cut(s)	231
BstX2I	RGATCY	5 cut(s)	104, 216, 373, 517, 540
BstYI	RGATCY	5 cut(s)	104, 216, 373, 517, 540
Bsu15I	ATCGAT	1 cut(s)	204
BsuI	GTATCC	1 cut(s)	2508
BsuRI	GGCC	6 cut(s)	14, 577, 1717, 1728, 2267, 2316
BsuTUI	ATCGAT	1 cut(s)	204
BtgI	CCRYGG	3 cut(s)	536, 1102, 2095
BtgZI	GCGATG	3 cut(s)	1972, 2036, 2555
BtrI	CACGTC	1 cut(s)	1235
BtsCI	GGATG	7 cut(s)	938, 1758, 1942, 1963, 2152, 2251, 2604
BtsI	GCAGTG	1 cut(s)	2168
BtsIMutI	CAGTG	5 cut(s)	371, 598, 1422, 2011, 2168
BveI	ACCTGC	1 cut(s)	1140
Cac8I	GCNNGC	6 cut(s)	390, 810, 1783, 2031, 2086, 2547
CaiI	CAGNNNCTG	2 cut(s)	1706, 2276
CciI	TCATGA	1 cut(s)	778
CfoI	GCGC	8 cut(s)	388, 810, 812, 1033, 2021, 2086, 2088, 2382
Cfr13I	GGNCC	9 cut(s)	303, 626, 1106, 1346, 1598, 1716, 2071, 2099, 2265
Cfr42I	CCGCGG	1 cut(s)	1105
ClaI	ATCGAT	1 cut(s)	204
CpoI	CGGWCCG	1 cut(s)	1106
CseI	GACGC	1 cut(s)	1257
Csp6I	GTAC	4 cut(s)	490, 1412, 2127, 2291
CspCI	CAANNNNNGTGG	2 cut(s)	574, 609
CspI	CGGWCCG	1 cut(s)	1106
CviQI	GTAC	4 cut(s)	490, 1412, 2127, 2291
DdeI	CTNAG	4 cut(s)	213, 370, 1282, 1586
DinI	GGCGCC	1 cut(s)	1032
EaeI	YGGCCR	1 cut(s)	12
Eam1104I	CTCTTC	3 cut(s)	507, 968, 1812
EarI	CTCTTC	3 cut(s)	507, 968, 1812
EciI	GGCGGA	1 cut(s)	542
Eco130I	CCWWGG	4 cut(s)	482, 536, 1006, 1342
Eco24I	GRGCYC	1 cut(s)	361
Eco31I	GGTCTC	1 cut(s)	2468
Eco47I	GGWCC	7 cut(s)	303, 626, 1106, 1346, 1598, 2071, 2099
Eco57I	CTGAAG	1 cut(s)	1989
EcoO109I	RGGNCCY	1 cut(s)	1716
EcoRII	CCWGG	6 cut(s)	622, 741, 1734, 1848, 2155, 2241
EcoT14I	CCWWGG	4 cut(s)	482, 536, 1006, 1342
EcoT22I	ATGCAT	2 cut(s)	2035, 2431
EcoT38I	GRGCYC	1 cut(s)	361
EgeI	GGCGCC	1 cut(s)	1032
EheI	GGCGCC	1 cut(s)	1032
ErhI	CCWWGG	4 cut(s)	482, 536, 1006, 1342
FalI	AAGNNNNNCTT	2 cut(s)	2564, 2596
FaqI	GGGAC	4 cut(s)	175, 627, 969, 2589
FauI	CCCGC	3 cut(s)	902, 934, 2411
FblI	GTMKAC	2 cut(s)	1246, 1540
Fnu4HI	GCNGC	9 cut(s)	384, 505, 559, 673, 859, 1740, 2256, 2486, 2550
FokI	GGATG	7 cut(s)	945, 1765, 1929, 1950, 2139, 2258, 2611
FriOI	GRGCYC	1 cut(s)	361
Fsp4HI	GCNGC	9 cut(s)	384, 505, 559, 673, 859, 1740, 2256, 2486, 2550
FspBI	CTAG	6 cut(s)	1446, 1602, 1994, 2415, 2546, 2631
GlaI	GCGC	8 cut(s)	387, 809, 811, 1032, 2020, 2085, 2087, 2381
GluI	GCNGC	9 cut(s)	384, 505, 559, 673, 859, 1740, 2256, 2486, 2550
GsuI	CTGGAG	1 cut(s)	1732
HaeII	RGCGCY	1 cut(s)	1034
HaeIII	GGCC	6 cut(s)	14, 577, 1717, 1728, 2267, 2316
HapII	CCGG	8 cut(s)	15, 37, 102, 246, 425, 524, 1676, 2141
HgaI	GACGC	1 cut(s)	1257
HhaI	GCGC	8 cut(s)	388, 810, 812, 1033, 2021, 2086, 2088, 2382
Hin1I	GRCGYC	2 cut(s)	1031, 1249
Hin6I	GCGC	8 cut(s)	386, 808, 810, 1031, 2019, 2084, 2086, 2380
HinP1I	GCGC	8 cut(s)	386, 808, 810, 1031, 2019, 2084, 2086, 2380
HincII	GTYRAC	2 cut(s)	1541, 2373
HindII	GTYRAC	2 cut(s)	1541, 2373
HindIII	AAGCTT	1 cut(s)	162
HpaI	GTTAAC	1 cut(s)	2373
HpaII	CCGG	8 cut(s)	15, 37, 102, 246, 425, 524, 1676, 2141
HphI	GGTGA	7 cut(s)	39, 326, 611, 1277, 1331, 1406, 2494
Hpy99I	CGWCG	2 cut(s)	463, 696
HpyAV	CCTTC	8 cut(s)	204, 414, 835, 844, 2062, 2074, 2398, 2433
HpyCH4III	ACNGT	9 cut(s)	131, 443, 602, 764, 1619, 1829, 2015, 2126, 2339
HpyCH4IV	ACGT	1 cut(s)	1234
HpyF10VI	GCNNNNNNNGC	9 cut(s)	20, 389, 567, 672, 807, 1110, 1238, 2264, 2546
HpyF3I	CTNAG	4 cut(s)	213, 370, 1282, 1586
HpySE526I	ACGT	1 cut(s)	1234
Hsp92I	GRCGYC	2 cut(s)	1031, 1249
HspAI	GCGC	8 cut(s)	386, 808, 810, 1031, 2019, 2084, 2086, 2380
KasI	GGCGCC	1 cut(s)	1030
Kpn2I	TCCGGA	2 cut(s)	101, 2140
KpnI	GGTACC	2 cut(s)	493, 1415
KspAI	GTTAAC	1 cut(s)	2373
KspI	CCGCGG	1 cut(s)	1105
LmnI	GCTCC	5 cut(s)	805, 1308, 1360, 1523, 2410
Lsp1109I	GCAGC	5 cut(s)	845, 1751, 2267, 2472, 2536
LweI	GCATC	6 cut(s)	923, 1439, 1925, 1949, 2438, 2532
MaeI	CTAG	6 cut(s)	1446, 1602, 1994, 2415, 2546, 2631
MaeII	ACGT	1 cut(s)	1234
MfeI	CAATTG	1 cut(s)	589
MflI	RGATCY	5 cut(s)	104, 216, 373, 517, 540
MhlI	GDGCHC	5 cut(s)	361, 827, 1234, 1357, 1575
MluCI	AATT	8 cut(s)	589, 710, 904, 1457, 1622, 1775, 1789, 2114
Mly113I	GGCGCC	1 cut(s)	1031
MlyI	GAGTC	6 cut(s)	92, 747, 876, 1536, 1895, 2571
MmeI	TCCRAC	3 cut(s)	440, 2043, 2358
Mph1103I	ATGCAT	2 cut(s)	2035, 2431
MroI	TCCGGA	2 cut(s)	101, 2140
MroXI	GAANNNNTTC	2 cut(s)	687, 2303
MseI	TTAA	3 cut(s)	282, 903, 2372
MslI	CAYNNNNRTG	2 cut(s)	1933, 2038
MspA1I	CMGCKG	2 cut(s)	1104, 1911
MspI	CCGG	8 cut(s)	15, 37, 102, 246, 425, 524, 1676, 2141
MspR9I	CCNGG	7 cut(s)	624, 743, 1677, 1736, 1850, 2157, 2243
MunI	CAATTG	1 cut(s)	589
Mva1269I	GAATGC	2 cut(s)	345, 2033
MvaI	CCWGG	6 cut(s)	624, 743, 1736, 1850, 2157, 2243
MvnI	CGCG	9 cut(s)	386, 388, 400, 810, 812, 941, 1104, 2021, 2086
MwoI	GCNNNNNNNGC	9 cut(s)	20, 389, 567, 672, 807, 1110, 1238, 2264, 2546
NarI	GGCGCC	1 cut(s)	1031
NciI	CCSGG	1 cut(s)	1677
NcoI	CCATGG	1 cut(s)	536
NheI	GCTAGC	1 cut(s)	2545
NlaIV	GGNNCC	9 cut(s)	19, 491, 519, 1032, 1097, 1176, 1413, 1820, 2412
NmeAIII	GCCGAG	1 cut(s)	1933
NmuCI	GTSAC	9 cut(s)	63, 131, 394, 596, 617, 1337, 2009, 2105, 2500
NsiI	ATGCAT	2 cut(s)	2035, 2431
NspI	RCATGY	3 cut(s)	920, 1785, 2033
NspV	TTCGAA	2 cut(s)	159, 410
PaeI	GCATGC	2 cut(s)	1785, 2033
PagI	TCATGA	1 cut(s)	778
PaqCI	CACCTGC	1 cut(s)	1140
PauI	GCGCGC	2 cut(s)	808, 2084
PciI	ACATGT	1 cut(s)	916
PcsI	WCGNNNNNNNCGW	1 cut(s)	283
PctI	GAATGC	2 cut(s)	345, 2033
PdmI	GAANNNNTTC	2 cut(s)	687, 2303
PflFI	GACNNNGTC	2 cut(s)	2103, 2457
PflMI	CCANNNNNTGG	1 cut(s)	1735
PfoI	TCCNGGA	1 cut(s)	741
PkrI	GCNGC	9 cut(s)	385, 506, 560, 674, 860, 1741, 2257, 2487, 2551
PleI	GAGTC	6 cut(s)	92, 746, 875, 1536, 1894, 2571
PluTI	GGCGCC	1 cut(s)	1034
PpsI	GAGTC	6 cut(s)	92, 746, 875, 1536, 1894, 2571
PscI	ACATGT	1 cut(s)	916
PshAI	GACNNNNGTC	1 cut(s)	2626
Psp6I	CCWGG	6 cut(s)	622, 741, 1734, 1848, 2155, 2241
PspGI	CCWGG	6 cut(s)	622, 741, 1734, 1848, 2155, 2241
PspN4I	GGNNCC	9 cut(s)	19, 491, 519, 1032, 1097, 1176, 1413, 1820, 2412
PspPI	GGNCC	9 cut(s)	303, 626, 1106, 1346, 1598, 1716, 2071, 2099, 2265
PsrI	GAACNNNNNNTAC	2 cut(s)	280, 312
PstI	CTGCAG	1 cut(s)	2490
PstNI	CAGNNNCTG	2 cut(s)	1706, 2276
PsuI	RGATCY	5 cut(s)	104, 216, 373, 517, 540
PsyI	GACNNNGTC	2 cut(s)	2103, 2457
PteI	GCGCGC	2 cut(s)	808, 2084
RsaI	GTAC	4 cut(s)	491, 1413, 2128, 2292
RsaNI	GTAC	4 cut(s)	490, 1412, 2127, 2291
RseI	CAYNNNNRTG	2 cut(s)	1933, 2038
Rsr2I	CGGWCCG	1 cut(s)	1106
RsrII	CGGWCCG	1 cut(s)	1106
SacII	CCGCGG	1 cut(s)	1105
SalI	GTCGAC	1 cut(s)	1539
SaqAI	TTAA	3 cut(s)	282, 903, 2372
SatI	GCNGC	9 cut(s)	384, 505, 559, 673, 859, 1740, 2256, 2486, 2550
Sau96I	GGNCC	9 cut(s)	303, 626, 1106, 1346, 1598, 1716, 2071, 2099, 2265
SchI	GAGTC	6 cut(s)	92, 747, 876, 1536, 1895, 2571
ScrFI	CCNGG	7 cut(s)	624, 743, 1677, 1736, 1850, 2157, 2243
SduI	GDGCHC	5 cut(s)	361, 827, 1234, 1357, 1575
SfaNI	GCATC	6 cut(s)	923, 1439, 1925, 1949, 2438, 2532
SfcI	CTRYAG	3 cut(s)	763, 2351, 2486
SfoI	GGCGCC	1 cut(s)	1032
Sfr303I	CCGCGG	1 cut(s)	1105
SfuI	TTCGAA	2 cut(s)	159, 410
SgrBI	CCGCGG	1 cut(s)	1105
SinI	GGWCC	7 cut(s)	303, 626, 1106, 1346, 1598, 2071, 2099
SmiMI	CAYNNNNRTG	2 cut(s)	1933, 2038
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
SphI	GCATGC	2 cut(s)	1785, 2033
Sse9I	AATT	8 cut(s)	589, 710, 904, 1457, 1622, 1775, 1789, 2114
SspDI	GGCGCC	1 cut(s)	1030
SspMI	CTAG	6 cut(s)	1446, 1602, 1994, 2415, 2546, 2631
StyD4I	CCNGG	7 cut(s)	622, 741, 1675, 1734, 1848, 2155, 2241
StyI	CCWWGG	4 cut(s)	482, 536, 1006, 1342
TaaI	ACNGT	9 cut(s)	131, 443, 602, 764, 1619, 1829, 2015, 2126, 2339
TaiI	ACGT	1 cut(s)	1237
TasI	AATT	8 cut(s)	589, 710, 904, 1457, 1622, 1775, 1789, 2114
TauI	GCSGC	4 cut(s)	386, 507, 561, 675
Tru1I	TTAA	3 cut(s)	282, 903, 2372
Tru9I	TTAA	3 cut(s)	282, 903, 2372
TscAI	CASTG	5 cut(s)	371, 605, 1429, 2018, 2168
TseFI	GTSAC	9 cut(s)	63, 131, 394, 596, 617, 1337, 2009, 2105, 2500
TseI	GCWGC	5 cut(s)	858, 1739, 2255, 2485, 2549
Tsp45I	GTSAC	9 cut(s)	63, 131, 394, 596, 617, 1337, 2009, 2105, 2500
TspDTI	ATGAA	6 cut(s)	1569, 1854, 2093, 2547, 2615, 2619
TspGWI	ACGGA	3 cut(s)	51, 1098, 1295
TspRI	CASTG	5 cut(s)	371, 605, 1429, 2018, 2168
Tth111I	GACNNNGTC	2 cut(s)	2103, 2457
Van91I	CCANNNNNTGG	1 cut(s)	1735
VneI	GTGCAC	1 cut(s)	1230
VpaK11BI	GGWCC	7 cut(s)	303, 626, 1106, 1346, 1598, 2071, 2099
XapI	RAATTY	1 cut(s)	1622
XbaI	TCTAGA	1 cut(s)	2630
XceI	RCATGY	3 cut(s)	920, 1785, 2033
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1707, 2309
XmiI	GTMKAC	2 cut(s)	1246, 1540
XmnI	GAANNNNTTC	2 cut(s)	687, 2303
XspI	CTAG	6 cut(s)	1446, 1602, 1994, 2415, 2546, 2631
Zsp2I	ATGCAT	2 cut(s)	2035, 2431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.