Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0010326

Physical Location & Seq

Genomic Coordinates Forward (+)

18876507 .. 18880865

Gene Structure 4359 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g24480.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

ATGAATTCGGACTCCGACACCGACTCCGATCACAGCCAATCCGGATCCGGATCCGGACCGGCTCGCCGCCACTCGGATCTATCCGACTCCATTTTCCGATCCTACTTAGAATTCACCGGAAAAGCCTCCGCCACCAACGCCGACCTCTCCAAGATCCAATCGTTCCTGACGTCATCCTCCTCCGGCGCGCTGTCATGTTTGATCTGCTTGGAGCGGATCCGACCCGGCGACCCGACCTGGTCCTGCACCTCCGTCTGCTTCTCCGTCTTCCACCTCTTCTGCATCCAGAGCTGGGCGCGCCAGGCCTCCGACTTGTCCGCGCTACGCGCTTCCACGCGCCTCCCGATTTCGCAGAGCAAAGCGGCGGAGGTATCACTCTGGAACTGCCCTAAGTGTAGAGTAGAGTACACTCACTCTCAAATTCCGAAGATTTATAAGTGCTTCTGCGGAAAACTCGAGAATCCACCGAGTGATGATCCGTGGATTCTTCCTCATTCGTGCGGTGAGGTCTGTAATCGGCCGCTGAAGCACAACTGCGGCCACCGTTGCTTGCTCTTGTGCCACCCGGGGCCCTGCCCGTCCTGCCCGAAGCTCGTGGAAGCTCGCTGCTTCTGCGGCAATGTGCAGGACGTGAGGCGGTGCGGGTTTAAGAATTTCTCGTGTAACAATGCGTGTGAGAAGAAACTAATGTGTGGGGTTCATTGCTGCGCGGAGATTTGCCACGAGGGGCCTTGCCCGCCGTGTAGGGTGAGGGGGAAGTACAGGTGCCAATGTGGGAAGAGGGAGGAGGAGAAGGAGTGTTGTGAGAGGTTAGATTTTAGGTGTGAGGAGGAGTGTGAGAAAATGCTGGGGTGTGGGCAGCATAAGTGTAGTAAAGGGTGTCATTCGGGGGAGTGTGGACCGTGCCCGTTTCAGGGGAAGAGGACTTGTCCGTGTGGGAAGAGAGTGCATGAAGGATTGTCTTGCAAGGATGCAGTGCCGCTGTGTGGCGCAACTTGCGATAAGATGCTCAGTTGTGGATACCATAGGTGCCCCGAGAGGTGTCATCGCGGGCAGTGCCTTGAGACGTGCAGATCGGTTGTCACTAAGTGGTGTCGCTGCGGGAGCTTGAAAAAGGAGGTTCCTTGTCATCAAGATTTGACATGTGAAAGGAAGTGCCAGAGATTAAGAGACTGTGGACGCCATCCTTGTAAACGCCGCTGCTGTGATGGGGATTGCCCACCATGCTCGGAGATTTGTGGCAGAAAGCTTCGCTGTAAAAACCACAAATGCCCATCTCCCTGCCATAGAGGTGCTTGTGCTCCTTGCCCTGTGATGGTGACAATTGCATGTTTATGTGGTGCGACACACTTTGAGGTTCCTTGTGGTACTGAGATGGATCAGAAGCCTCCTCGATGTCGTAAGCCGTGCCCTATTACTCCTTTATGTAGGCATGGGCCAAATAGCAAGCCGCATAAATGCCATTATGGAGCTTGCCACCCATGTAAACTACTTTGTGAAGAAGAATACCCATGTGGCCACAAGTGCCAGCTAAGGTGCCATGGACCTAAACCTCCTCCAAATCCAGAATTTACATTGAAACCGAAGAAAAAGAAGTCTTTTCATCCGCCCGAGTGTACTCCTGGTTCTCCATGCCCTCCATGCCCAGAGCTTGTTTGGAGATCATGTGTGGGCCAGCACTTCGCAGCGGACAGAATGATGGTCTGTTCAGATAAATCATTATATTCCTGTGATAACTTGTGTGGGAATCCTCTACCTTGTGGTAACCACTTCTGCCCTAAAACTTGCCACCCGCTCAAGAATCAGTCTTTGCCATCAGCGCAGCAAGCAAGAAGTGAGCCTTGTGAAGTGTGTCATCTTCCTTGCGAAAAGGAGAGAGCGCCTGCATGTATACATCCTTGCCCCTTGTCATGTCATCCTGGAGATTGCCCTCCTTGCAAAGTGCTCGTTAAGCGATCATGTCACTGTGGTTCCATGGTCCATGTTTTTGAGTGCATATACTATAATAGTTTGTCTGAAAAGGAGCAAACAGCTGTTCGTTCTTGTAAGGGTCTCTGTCATAGAAAGTTGCCTTACTGTACGCATCTGTGCCCAGAGACTTGTCATCCTGGTCAATGCCCATCACCTGAGAAGTGCTCTAAAAAGGTTACTGTTCGTTGTGGATGCCAGACCTTGAAAAGGGAGTGGTTATGTCATGATGTGCAGGCAGCCTATCGCAATGCTGGTACTGATCCCAAAGATATAACTAAGAATCAATTTGGACTTGGACTCCTACCTTGCGACTCTAATTGCAAAAGCAAACAAAAGATTGTTGATTCAGAATTACATTCACGCAGACCTAAAGTTGTGGAGGTGAAGGAACCAGATACTGATAAGCCTGTACCAAAAAGGAAGAGAAGGCGTGAAAGGGGACAAGAAGTGCCACAAATCTCGACACTGCAAAAAGTTTTTGCCCACGTGAAGCGTTTTCTTTTGGTTGTCACCCTTCTGGTGCTCTTAGTCACAGCTTCATATTATGGTTACAAGGGTCTCCTCCGGCTATCAGATTGGATGAATGAAGTAGAAGAGAAAAGGCAGAGAAGACACCCCGGTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000976 GO:0000977 GO:0000981 GO:0000982 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010310 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051193 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-NF-X1

Protein Analysis

866

Amino Acids

96.65

Weight (kDa)

8.77

Isoelectric Point (pI)

60.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05660
fragaria_vesca	FvH4_7g24480
malus_domestica	MD00G1166700.v1.1 MD07G1222000.v1.1
prunus_persica	Prupe.2G250200_v2.0.a1
pyrus_communis	pycom07g20050
rosa_chinensis	RchiOBHm_Chr1g0370241
rosa_laevigata	RLG00000027066
rosa_multiflora	Rmu_co8251429.1_g000001 Rmu_co8258023.1_g000001 Rmu_sc0018500.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286720 Rroxscaffold_4G00287290
rosa_rugosa	Rorug01G0354900 Rorug01G0355000 Rorug01G0355100
rosa_samantha	Rh1AG363700 Rh1BG326800 Rh1CG340100 Rh1DG357200
rosa_wichuraiana	Rw1G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	435
AatII	GACGTC	1 cut(s)	173
AccB1I	GGYRCC	3 cut(s)	765, 1029, 1536
AccBSI	CCGCTC	2 cut(s)	214, 1795
AccI	GTMKAC	1 cut(s)	1891
AccII	CGCG	7 cut(s)	188, 298, 320, 327, 337, 710, 1050
AccIII	TCCGGA	3 cut(s)	41, 47, 53
AcoI	YGGCCR	3 cut(s)	518, 538, 1516
AcsI	RAATTY	5 cut(s)	4, 110, 420, 652, 1568
AcuI	CTGAAG	1 cut(s)	545
AcvI	CACGTG	1 cut(s)	2458
AcyI	GRCGYC	2 cut(s)	170, 1180
AdeI	CACNNNGTG	2 cut(s)	470, 1089
AfaI	GTAC	7 cut(s)	407, 761, 1369, 1618, 2080, 2227, 2382
AfiI	CCNNNNNNNGG	7 cut(s)	73, 292, 913, 914, 986, 1315, 2178
AflIII	ACRYGT	1 cut(s)	1142
AgsI	TTSAA	3 cut(s)	1111, 1579, 2176
AjiI	CACGTC	2 cut(s)	631, 1068
AjnI	CCWGG	5 cut(s)	236, 300, 1621, 1918, 2107
Alw21I	GWGCWC	4 cut(s)	1303, 1947, 2138, 2496
Alw26I	GTCTC	5 cut(s)	1058, 1164, 2057, 2090, 2534
AlwNI	CAGNNNCTG	1 cut(s)	2369
Ama87I	CYCGRG	4 cut(s)	455, 565, 1034, 1610
Aor13HI	TCCGGA	3 cut(s)	41, 47, 53
AoxI	GGCC	8 cut(s)	303, 518, 538, 569, 728, 1436, 1516, 1672
ApaI	GGGCCC	1 cut(s)	573
ApeKI	GCWGC	8 cut(s)	606, 705, 859, 1098, 1200, 1685, 1822, 2207
ApoI	RAATTY	5 cut(s)	4, 110, 420, 652, 1568
AscI	GGCGCGCC	1 cut(s)	296
AsuC2I	CCSGG	4 cut(s)	225, 566, 567, 2589
AsuHPI	GGTGA	7 cut(s)	106, 515, 760, 1330, 2115, 2365, 2473
AvaI	CYCGRG	4 cut(s)	455, 565, 1034, 1610
AvaII	GGWCC	5 cut(s)	56, 240, 899, 1544, 1978
BaeGI	GKGCMC	5 cut(s)	573, 908, 1034, 1412, 2093
BaeI	ACNNNNGTAYC	1 cut(s)	2575
BalI	TGGCCA	1 cut(s)	1518
BamHI	GGATCC	3 cut(s)	44, 50, 216
BanI	GGYRCC	3 cut(s)	765, 1029, 1536
BanII	GRGCYC	1 cut(s)	573
BauI	CACGAG	3 cut(s)	593, 658, 722
BbrPI	CACGTG	1 cut(s)	2458
BbsI	GAAGAC	2 cut(s)	259, 2587
Bbv12I	GWGCWC	4 cut(s)	1303, 1947, 2138, 2496
BbvI	GCAGC	8 cut(s)	593, 692, 871, 1085, 1187, 1697, 1834, 2219
BccI	CCATC	8 cut(s)	1191, 1202, 1282, 1309, 1369, 1693, 1822, 2128
BceAI	ACGGC	2 cut(s)	724, 1390
BcgI	CGANNNNNNTGC	2 cut(s)	1927, 1961
BciT130I	CCWGG	5 cut(s)	238, 302, 1623, 1920, 2109
BciVI	GTATCC	1 cut(s)	1013
BcnI	CCSGG	4 cut(s)	225, 566, 567, 2589
BcoDI	GTCTC	5 cut(s)	1058, 1164, 2057, 2090, 2534
BfoI	RGCGCY	1 cut(s)	1883
BfuI	GTATCC	1 cut(s)	1013
Bme1390I	CCNGG	9 cut(s)	225, 238, 302, 566, 567, 1623, 1920, 2109, 2589
Bme18I	GGWCC	5 cut(s)	56, 240, 899, 1544, 1978
BmeT110I	CYCGRG	4 cut(s)	455, 565, 1034, 1610
BmgBI	CACGTC	2 cut(s)	631, 1068
BmrFI	CCNGG	9 cut(s)	225, 238, 302, 566, 567, 1623, 1920, 2109, 2589
BmsI	GCATC	5 cut(s)	291, 961, 996, 2092, 2153
BpiI	GAAGAC	2 cut(s)	259, 2587
BplI	GAGNNNNNCTC	2 cut(s)	2120, 2152
BpmI	CTGGAG	1 cut(s)	1941
Bpu10I	CCTNAGC	1 cut(s)	1532
BpuEI	CTTGAG	2 cut(s)	1082, 1781
BpuMI	CCSGG	4 cut(s)	225, 566, 567, 2589
BsaAI	YACGTR	1 cut(s)	2458
BsaBI	GATNNNNATC	1 cut(s)	49
BsaHI	GRCGYC	2 cut(s)	170, 1180
BsaI	GGTCTC	2 cut(s)	2057, 2534
BsaJI	CCNNGG	6 cut(s)	479, 565, 566, 1540, 1974, 2587
BsaWI	WCCGGW	4 cut(s)	41, 47, 53, 116
BsaXI	ACNNNNNCTCC	8 cut(s)	8, 38, 782, 812, 1651, 1681, 2253, 2283
Bsc4I	CCNNNNNNNGG	7 cut(s)	73, 292, 913, 914, 986, 1315, 2178
Bse118I	RCCGGY	1 cut(s)	58
Bse3DI	GCAATG	3 cut(s)	625, 700, 2224
Bse8I	GATNNNNATC	1 cut(s)	49
BseAI	TCCGGA	3 cut(s)	41, 47, 53
BseBI	CCWGG	5 cut(s)	238, 302, 1623, 1920, 2109
BseDI	CCNNGG	6 cut(s)	479, 565, 566, 1540, 1974, 2587
BseJI	GATNNNNATC	1 cut(s)	49
BseLI	CCNNNNNNNGG	7 cut(s)	73, 292, 913, 914, 986, 1315, 2178
BseMI	GCAATG	3 cut(s)	625, 700, 2224
BseMII	CTCAG	3 cut(s)	1024, 1362, 2118
BsePI	GCGCGC	2 cut(s)	186, 296
BseRI	GAGGAG	8 cut(s)	169, 800, 803, 842, 845, 1380, 1545, 2522
BseSI	GKGCMC	5 cut(s)	573, 908, 1034, 1412, 2093
BseX3I	CGGCCG	1 cut(s)	518
BseXI	GCAGC	8 cut(s)	593, 692, 871, 1085, 1187, 1697, 1834, 2219
BseYI	CCCAGC	2 cut(s)	291, 847
BsgI	GTGCAG	4 cut(s)	229, 644, 1090, 2222
Bsh1236I	CGCG	7 cut(s)	188, 298, 320, 327, 337, 710, 1050
Bsh1285I	CGRYCG	1 cut(s)	521
BshFI	GGCC	8 cut(s)	305, 520, 540, 571, 730, 1438, 1518, 1674
BshNI	GGYRCC	3 cut(s)	765, 1029, 1536
BsiEI	CGRYCG	1 cut(s)	521
BsiHKAI	GWGCWC	4 cut(s)	1303, 1947, 2138, 2496
BsiHKCI	CYCGRG	4 cut(s)	455, 565, 1034, 1610
BslFI	GGGAC	1 cut(s)	2424
BslI	CCNNNNNNNGG	7 cut(s)	73, 292, 913, 914, 986, 1315, 2178
BsmAI	GTCTC	5 cut(s)	1058, 1164, 2057, 2090, 2534
BsmBI	CGTCTC	1 cut(s)	1058
BsmFI	GGGAC	1 cut(s)	2424
BsnI	GGCC	8 cut(s)	305, 520, 540, 571, 730, 1438, 1518, 1674
Bso31I	GGTCTC	2 cut(s)	2057, 2534
BsoBI	CYCGRG	4 cut(s)	455, 565, 1034, 1610
Bsp120I	GGGCCC	1 cut(s)	569
Bsp1286I	GDGCHC	9 cut(s)	573, 908, 1034, 1303, 1412, 1947, 2093, 2138, 2496
Bsp13I	TCCGGA	3 cut(s)	41, 47, 53
Bsp19I	CCATGG	2 cut(s)	1540, 1974
BspANI	GGCC	8 cut(s)	305, 520, 540, 571, 730, 1438, 1518, 1674
BspCNI	CTCAG	3 cut(s)	1023, 1363, 2119
BspEI	TCCGGA	3 cut(s)	41, 47, 53
BspFNI	CGCG	7 cut(s)	188, 298, 320, 327, 337, 710, 1050
BspHI	TCATGA	1 cut(s)	2194
BspT107I	GGYRCC	3 cut(s)	765, 1029, 1536
BspTNI	GGTCTC	2 cut(s)	2057, 2534
BsrBI	CCGCTC	2 cut(s)	214, 1795
BsrDI	GCAATG	3 cut(s)	625, 700, 2224
BsrFI	RCCGGY	1 cut(s)	58
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	6 cut(s)	479, 565, 566, 1540, 1974, 2587
BssHII	GCGCGC	2 cut(s)	186, 296
BssNAI	GTATAC	1 cut(s)	1892
BssNI	GRCGYC	2 cut(s)	170, 1180
BssSI	CACGAG	3 cut(s)	593, 658, 722
BssT1I	CCWWGG	2 cut(s)	1540, 1974
Bst1107I	GTATAC	1 cut(s)	1892
Bst2BI	CACGAG	3 cut(s)	593, 658, 722
Bst2UI	CCWGG	5 cut(s)	238, 302, 1623, 1920, 2109
Bst4CI	ACNGT	6 cut(s)	545, 903, 1175, 1967, 2078, 2152
Bst6I	CTCTTC	6 cut(s)	281, 773, 914, 935, 2387, 2559
BstACI	GRCGYC	2 cut(s)	170, 1180
BstBAI	YACGTR	1 cut(s)	2458
BstDEI	CTNAG	9 cut(s)	106, 390, 1010, 1086, 1371, 1532, 2127, 2247, 2497
BstDSI	CCRYGG	3 cut(s)	479, 1540, 1974
BstEII	GGTNACC	1 cut(s)	1763
BstENI	CCTNNNNNAGG	1 cut(s)	2176
BstFNI	CGCG	7 cut(s)	188, 298, 320, 327, 337, 710, 1050
BstH2I	RGCGCY	1 cut(s)	1883
BstMAI	GTCTC	5 cut(s)	1058, 1164, 2057, 2090, 2534
BstMCI	CGRYCG	1 cut(s)	521
BstNI	CCWGG	5 cut(s)	238, 302, 1623, 1920, 2109
BstNSI	RCATGY	3 cut(s)	1146, 1332, 1890
BstPI	GGTNACC	1 cut(s)	1763
BstSCI	CCNGG	9 cut(s)	223, 236, 300, 564, 565, 1621, 1918, 2107, 2587
BstSLI	GKGCMC	5 cut(s)	573, 908, 1034, 1412, 2093
BstUI	CGCG	7 cut(s)	188, 298, 320, 327, 337, 710, 1050
BstV1I	GCAGC	8 cut(s)	593, 692, 871, 1085, 1187, 1697, 1834, 2219
BstV2I	GAAGAC	2 cut(s)	259, 2587
BstX2I	RGATCY	5 cut(s)	44, 50, 76, 153, 216
BstYI	RGATCY	5 cut(s)	44, 50, 76, 153, 216
BstZ17I	GTATAC	1 cut(s)	1892
BstZI	CGGCCG	1 cut(s)	518
BsuI	GTATCC	1 cut(s)	1013
BsuRI	GGCC	8 cut(s)	305, 520, 540, 571, 730, 1438, 1518, 1674
BtgI	CCRYGG	3 cut(s)	479, 1540, 1974
BtgZI	GCGATG	1 cut(s)	1031
BtrI	CACGTC	2 cut(s)	631, 1068
BtsI	GCAGTG	3 cut(s)	981, 1061, 2435
BtsIMutI	CAGTG	4 cut(s)	981, 1061, 1963, 2435
CaiI	CAGNNNCTG	1 cut(s)	2369
CciI	TCATGA	1 cut(s)	2194
Cfr10I	RCCGGY	1 cut(s)	58
Cfr9I	CCCGGG	1 cut(s)	565
CpoI	CGGWCCG	1 cut(s)	56
CseI	GACGC	1 cut(s)	1188
CsiI	ACCWGGT	1 cut(s)	236
Csp6I	GTAC	7 cut(s)	406, 760, 1368, 1617, 2079, 2226, 2381
CspI	CGGWCCG	1 cut(s)	56
CviQI	GTAC	7 cut(s)	406, 760, 1368, 1617, 2079, 2226, 2381
DdeI	CTNAG	9 cut(s)	106, 390, 1010, 1086, 1371, 1532, 2127, 2247, 2497
DraIII	CACNNNGTG	2 cut(s)	470, 1089
EaeI	YGGCCR	3 cut(s)	518, 538, 1516
EagI	CGGCCG	1 cut(s)	518
Eam1104I	CTCTTC	6 cut(s)	281, 773, 914, 935, 2387, 2559
EarI	CTCTTC	6 cut(s)	281, 773, 914, 935, 2387, 2559
EciI	GGCGGA	3 cut(s)	118, 380, 1596
EclXI	CGGCCG	1 cut(s)	518
Eco130I	CCWWGG	2 cut(s)	1540, 1974
Eco147I	AGGCCT	1 cut(s)	305
Eco24I	GRGCYC	1 cut(s)	573
Eco31I	GGTCTC	2 cut(s)	2057, 2534
Eco47I	GGWCC	5 cut(s)	56, 240, 899, 1544, 1978
Eco52I	CGGCCG	1 cut(s)	518
Eco57I	CTGAAG	1 cut(s)	545
Eco72I	CACGTG	1 cut(s)	2458
Eco88I	CYCGRG	4 cut(s)	455, 565, 1034, 1610
Eco91I	GGTNACC	1 cut(s)	1763
EcoNI	CCTNNNNNAGG	1 cut(s)	2176
EcoO109I	RGGNCCY	3 cut(s)	569, 570, 728
EcoO65I	GGTNACC	1 cut(s)	1763
EcoRI	GAATTC	2 cut(s)	4, 110
EcoRII	CCWGG	5 cut(s)	236, 300, 1621, 1918, 2107
EcoT14I	CCWWGG	2 cut(s)	1540, 1974
EcoT38I	GRGCYC	1 cut(s)	573
ErhI	CCWWGG	2 cut(s)	1540, 1974
Esp3I	CGTCTC	1 cut(s)	1058
FalI	AAGNNNNNCTT	2 cut(s)	1825, 1857
FaqI	GGGAC	1 cut(s)	2424
FauI	CCCGC	5 cut(s)	635, 744, 1043, 1094, 1800
FblI	GTMKAC	1 cut(s)	1891
FriOI	GRGCYC	1 cut(s)	573
GsaI	CCCAGC	2 cut(s)	295, 851
GsuI	CTGGAG	1 cut(s)	1941
HaeII	RGCGCY	1 cut(s)	1883
HaeIII	GGCC	8 cut(s)	305, 520, 540, 571, 730, 1438, 1518, 1674
HgaI	GACGC	1 cut(s)	1188
Hin1I	GRCGYC	2 cut(s)	170, 1180
HindIII	AAGCTT	1 cut(s)	1247
HphI	GGTGA	7 cut(s)	106, 515, 760, 1330, 2115, 2365, 2473
Hpy166II	GTNNAC	7 cut(s)	408, 899, 1178, 1193, 1487, 1617, 1892
Hpy8I	GTNNAC	7 cut(s)	408, 899, 1178, 1193, 1487, 1617, 1892
HpyAV	CCTTC	5 cut(s)	787, 947, 2350, 2391, 2495
HpyCH4III	ACNGT	6 cut(s)	545, 903, 1175, 1967, 2078, 2152
HpyCH4IV	ACGT	4 cut(s)	170, 630, 1067, 2457
HpyF3I	CTNAG	9 cut(s)	106, 390, 1010, 1086, 1371, 1532, 2127, 2247, 2497
HpySE526I	ACGT	4 cut(s)	170, 630, 1067, 2457
Hsp92I	GRCGYC	2 cut(s)	170, 1180
Kpn2I	TCCGGA	3 cut(s)	41, 47, 53
LmnI	GCTCC	5 cut(s)	211, 1104, 1306, 1469, 2023
Lsp1109I	GCAGC	8 cut(s)	593, 692, 871, 1085, 1187, 1697, 1834, 2219
LweI	GCATC	5 cut(s)	291, 961, 996, 2092, 2153
MabI	ACCWGGT	1 cut(s)	236
MaeII	ACGT	4 cut(s)	170, 630, 1067, 2457
MaeIII	GTNAC	9 cut(s)	662, 1081, 1318, 1763, 1961, 2146, 2479, 2500, 2519
MbiI	CCGCTC	2 cut(s)	214, 1795
MfeI	CAATTG	1 cut(s)	1323
MflI	RGATCY	5 cut(s)	44, 50, 76, 153, 216
MhlI	GDGCHC	9 cut(s)	573, 908, 1034, 1303, 1412, 1947, 2093, 2138, 2496
MlsI	TGGCCA	1 cut(s)	1518
MluCI	AATT	9 cut(s)	4, 110, 420, 652, 1323, 1568, 2255, 2287, 2321
MluNI	TGGCCA	1 cut(s)	1518
MlyI	GAGTC	5 cut(s)	5, 17, 80, 2262, 2276
MmeI	TCCRAC	4 cut(s)	39, 108, 244, 333
Mox20I	TGGCCA	1 cut(s)	1518
MroI	TCCGGA	3 cut(s)	41, 47, 53
MscI	TGGCCA	1 cut(s)	1518
MseI	TTAA	3 cut(s)	648, 1166, 1950
MslI	CAYNNNNRTG	2 cut(s)	1290, 1333
Msp20I	TGGCCA	1 cut(s)	1518
MspA1I	CMGCKG	5 cut(s)	523, 982, 1200, 1688, 2033
MspR9I	CCNGG	9 cut(s)	225, 238, 302, 566, 567, 1623, 1920, 2109, 2589
MunI	CAATTG	1 cut(s)	1323
MvaI	CCWGG	5 cut(s)	238, 302, 1623, 1920, 2109
MvnI	CGCG	7 cut(s)	188, 298, 320, 327, 337, 710, 1050
NciI	CCSGG	4 cut(s)	225, 566, 567, 2589
NcoI	CCATGG	2 cut(s)	1540, 1974
NmuCI	GTSAC	5 cut(s)	1081, 1318, 1961, 2479, 2500
NspI	RCATGY	3 cut(s)	1146, 1332, 1890
PaeR7I	CTCGAG	1 cut(s)	455
PagI	TCATGA	1 cut(s)	2194
PalAI	GGCGCGCC	1 cut(s)	296
PauI	GCGCGC	2 cut(s)	186, 296
PceI	AGGCCT	1 cut(s)	305
PciI	ACATGT	1 cut(s)	1142
PcsI	WCGNNNNNNNCGW	2 cut(s)	167, 341
PfeI	GAWTC	6 cut(s)	460, 484, 1747, 1801, 2251, 2315
PflFI	GACNNNGTC	1 cut(s)	238
PfoI	TCCNGGA	1 cut(s)	1918
PleI	GAGTC	5 cut(s)	5, 17, 80, 2262, 2276
PmaCI	CACGTG	1 cut(s)	2458
PmlI	CACGTG	1 cut(s)	2458
PpsI	GAGTC	5 cut(s)	5, 17, 80, 2262, 2276
Ppu21I	YACGTR	1 cut(s)	2458
PscI	ACATGT	1 cut(s)	1142
PsiI	TTATAA	1 cut(s)	435
Psp6I	CCWGG	5 cut(s)	236, 300, 1621, 1918, 2107
PspCI	CACGTG	1 cut(s)	2458
PspEI	GGTNACC	1 cut(s)	1763
PspFI	CCCAGC	2 cut(s)	291, 847
PspGI	CCWGG	5 cut(s)	236, 300, 1621, 1918, 2107
PspOMI	GGGCCC	1 cut(s)	569
PsrI	GAACNNNNNNTAC	2 cut(s)	1609, 1641
PstNI	CAGNNNCTG	1 cut(s)	2369
PsuI	RGATCY	5 cut(s)	44, 50, 76, 153, 216
PsyI	GACNNNGTC	1 cut(s)	238
PteI	GCGCGC	2 cut(s)	186, 296
PvuII	CAGCTG	1 cut(s)	2033
RsaI	GTAC	7 cut(s)	407, 761, 1369, 1618, 2080, 2227, 2382
RsaNI	GTAC	7 cut(s)	406, 760, 1368, 1617, 2079, 2226, 2381
RseI	CAYNNNNRTG	2 cut(s)	1290, 1333
Rsr2I	CGGWCCG	1 cut(s)	56
RsrII	CGGWCCG	1 cut(s)	56
SaqAI	TTAA	3 cut(s)	648, 1166, 1950
SchI	GAGTC	5 cut(s)	5, 17, 80, 2262, 2276
ScrFI	CCNGG	9 cut(s)	225, 238, 302, 566, 567, 1623, 1920, 2109, 2589
SduI	GDGCHC	9 cut(s)	573, 908, 1034, 1303, 1412, 1947, 2093, 2138, 2496
SexAI	ACCWGGT	1 cut(s)	236
SfaNI	GCATC	5 cut(s)	291, 961, 996, 2092, 2153
Sfr274I	CTCGAG	1 cut(s)	455
SgsI	GGCGCGCC	1 cut(s)	296
SinI	GGWCC	5 cut(s)	56, 240, 899, 1544, 1978
SlaI	CTCGAG	1 cut(s)	455
SmaI	CCCGGG	1 cut(s)	567
SmiMI	CAYNNNNRTG	2 cut(s)	1290, 1333
SmlI	CTYRAG	3 cut(s)	455, 1061, 1796
SmoI	CTYRAG	3 cut(s)	455, 1061, 1796
Sse9I	AATT	9 cut(s)	4, 110, 420, 652, 1323, 1568, 2255, 2287, 2321
SseBI	AGGCCT	1 cut(s)	305
StuI	AGGCCT	1 cut(s)	305
StyD4I	CCNGG	9 cut(s)	223, 236, 300, 564, 565, 1621, 1918, 2107, 2587
StyI	CCWWGG	2 cut(s)	1540, 1974
TaaI	ACNGT	6 cut(s)	545, 903, 1175, 1967, 2078, 2152
TaiI	ACGT	4 cut(s)	173, 633, 1070, 2460
TaqI	TCGA	3 cut(s)	456, 1393, 2432
TasI	AATT	9 cut(s)	4, 110, 420, 652, 1323, 1568, 2255, 2287, 2321
TatI	WGTACW	3 cut(s)	405, 759, 1616
TauI	GCSGC	8 cut(s)	69, 365, 523, 540, 618, 982, 1200, 1453
TfiI	GAWTC	6 cut(s)	460, 484, 1747, 1801, 2251, 2315
Tru1I	TTAA	3 cut(s)	648, 1166, 1950
Tru9I	TTAA	3 cut(s)	648, 1166, 1950
TscAI	CASTG	4 cut(s)	981, 1061, 1970, 2442
TseFI	GTSAC	5 cut(s)	1081, 1318, 1961, 2479, 2500
TseI	GCWGC	8 cut(s)	606, 705, 859, 1098, 1200, 1685, 1822, 2207
Tsp45I	GTSAC	5 cut(s)	1081, 1318, 1961, 2479, 2500
TspDTI	ATGAA	7 cut(s)	17, 689, 966, 1592, 2499, 2567, 2571
TspGWI	ACGGA	4 cut(s)	241, 253, 468, 921
TspMI	CCCGGG	1 cut(s)	565
TspRI	CASTG	4 cut(s)	981, 1061, 1970, 2442
Tth111I	GACNNNGTC	1 cut(s)	238
VpaK11BI	GGWCC	5 cut(s)	56, 240, 899, 1544, 1978
XagI	CCTNNNNNAGG	1 cut(s)	2176
XapI	RAATTY	5 cut(s)	4, 110, 420, 652, 1568
XceI	RCATGY	3 cut(s)	1146, 1332, 1890
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1653
XhoI	CTCGAG	1 cut(s)	455
XmaI	CCCGGG	1 cut(s)	565
XmiI	GTMKAC	1 cut(s)	1891
ZraI	GACGTC	1 cut(s)	171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.