Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006252

Physical Location & Seq

Genomic Coordinates Reverse (-)

4002742 .. 4008804

Gene Structure 6063 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G12370.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGACAGAAGGAATCAGAGCAAGAGGACCCAGATCATCCTCTGTTAACTCTGTTCCTCTGATTCTTGACATTGAAGACTTTAAGGGTGATTTTTCATTTGATGCATTATTTGGGAACCTGGTAAACGACCTCTTGCCGTCTTTCCTAGACGAAGAAGCAGATTCTGGGGATGGCCATGGCAACATTGCTGGAGTTGATGGTTTGACAAATGGGCATTTACGTGGACAGTCTGCTCCTTTGTCCTCTGCTCCTTTTTTTCCTGAAGTAGATGGTCTTTTGTCTCTGTTCAAAGATGCTTGCAAGGAGTTAGTTGATCTTCGGAAGCAGGTTGATGGAAGGCTCAATACACTAAAGAAGGAAGTTTCAACCCAAGATTCTAAACACCGGAAGACACTGACTGAGATAGAGAAGGGTGTGGACGGTCTGTTTGAGAGCTTTGCAAGGTTGGACGGTCGTATTTCAAGTGTTGGACAGACCGCTGCAAAAATAGGAGATCATTTGCAGAGTGCAGATGCTCAGCGGGAAACTGCTAGCCAGACGATAGATCTTATAAAGTACCTAATGGAGTTCAACGGCAGCCCAGGGGATCTTATGGAGCTTTCCGCTTTGTTTTCTGATGATAGCCGCGTAGCTGAGGCTGCTTCTATCGCTCAGAAATTACGATCCTTTGCTGAGGAAGACATTGGAAGGCAAGGTGCGAGTGCAGCTGCAGGAAATGCTACCCCTGGCCGAGGACTGGAAGTTGCAGTTGCTAATCTTCAGGATTACTGTAATGAATTGGAGAACAGGCTTTTATCTCGTTTTGATGCTGCATCACAGCGGAGAGATTTATCAACCATGTCAGAATGCGCTAAGATTTTGTCACAGTTTAACAGGGGTACAAGTGCTATGCAACATTATGTGGCTACACGTCCAATGTTTATTGATGTGGAAGTCATGAATTCAGACATTAGGTTGGTTCTTGGTGACCATGGTTCTCAGCCTAGTCCTAGCAATGTTGCCCGTGGACTTTCTGCTTTATTCAAGGAAATTACAGACACCGTACGCAAAGAAGCAGCGACCATTACAGCTGTTTTCCCGACTCCAAATGAAGTTATGGCGATCTTAGTTCAGAGAGTTCTGGAGCAGCGTGTCACAGGTATTCTAGACAAAATTTTGGCGAAGCCCTCTCTTATGAGTCCACCACCTGTGCAAGAAGGCGGACTGTTACTATACCTTAGAATGTTAGCAGTTGCATATGAGAGAACACAAGAACTTGCTAAAGACCTCCGAGCTGTTGGATGTGGTGACCTGGATGTTGAAGATTTGACAGAGTCCTTGTTTTCCTCGCACAAGGATGAATACCCTGAGCATGAGCGGGCCTCCTTAAAACAACTATATCAAGCAAAGATGGAAGAATTGCGTGCTGAGAGTCAGCAAGTCTCAGAGTCATCTGGGACAATAGGACGCTCTAAGGGTGCTTCAATATCATCATCTCTGCAGCAGATATCAGTCACCGTTGTCACAGATTTTGTTCGATGGAATGAAGAAGCAATAACCAGATGCACATTGTTTTCATCTCAGCCAGCCACACTTGCAGCCAATGTTAAAGCTATATTTACTTGCCTGCTAGACCAGGTGAGCGTATACATAACTGAGGGACTTGAACGGGCAAGGGATAGCCTGTCTGAAGCTGCAGCATTGAGGGAGAGATTTGTTTTGGGCAGAAGAGTAGCTGCTGCAGCTGCTTCTGCTGCAGAAGCTGCTGCTGCTGCTGGTGAAAGTAGCTTTAAATCCTTCATGGTTGCTGTGCAACGTTGCGGTAGCAGTGTTGCTATAGTTCAGCAGTATTTTGCAAATTCTATATCTCGGCTTCTCCTACCAGTGGATGGTGCACATGCTGCTTCATGTGAAGAAATGTCAACTGCTCTGTCCAAAGCAGAGGCAGCTGCTTATAAAGGACTTCAGCAGTGCATTGAAACTGTGATGGCTGAGGTTGATAGGCTACTTTCATCTGAGCAGAAGTCTACTGATTATAGATCAACTGATGATGGAATTGCTTCTGACCACCGTCCAACAAATGCCTGCATAAGGGTCGTGGCTTATCTTTCCCGGGTACTTGAGTCTGCTTTCACTGCCTTGGAAGGTCTTAATAAGCAAGCCTTCCTGACTGAACTGGGAAATAGGTTAGAAAAACTGCTACTAACACACTGGCAGAAGTTCACTTTCAATCCCAGTGGAGGACTGCGGCTGAAGCGTGACTTAAACGAGTATGTAGGATTTGTTAAAAGCTTCGGTGCTCCATCTGTGGATGAGAAATTTGAGCTTCTGGGAATAATAGCGAATGTTTTCATAGTTGCTCCAGATAGTCTGCCAACATTGTTCGAGGGAAGTCCAAGCATTCGCAAAGACGCACAAAGGTTTATTCAACTGAGGGAGGACTATAAGAGTGCGAAGCTGGCAACAAAACTCAGCTCCTTGTGGCCAAGCTTGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005938 GO:0006810 GO:0006887 GO:0006892 GO:0006893 GO:0008150 GO:0009987 GO:0016192 GO:0031982 GO:0032940 GO:0032991 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048193 GO:0051179 GO:0051234 GO:0070062 GO:0071944 GO:0098876 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec10

Protein Analysis

825

Amino Acids

89.69

Weight (kDa)

5.23

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec10_N	PF20667	90 - 206	8.5e-33	Exocyst complex component Sec10, N-terminal
Sec10_HB	PF07393	212 - 816	2.3e-158	Exocyst complex component Sec10-like, alpha-helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12370 AT5G12370 AT5G12370
fragaria_vesca	FvH4_7g15330 FvH4_7g15330 FvH4_7g15330 FvH4_7g15330
malus_domestica	MD01G1071200.v1.1 MD07G1131500.v1.1
prunus_persica	Prupe.2G177200_v2.0.a1
pyrus_communis	pycom01g10010 pycom07g12840
rosa_chinensis	RchiOBHm_Chr1g0357661 RchiOBHm_Chr1g0375651 RchiOBHm_Chr1g0375661
rosa_laevigata	RLG00000028010
rosa_multiflora	Rmu_sc0001644.1_g000021 Rmu_sc0004683.1_g000003
rosa_roxburghii	Rroxscaffold_4G00282690 Rroxscaffold_4G00298660
rosa_rugosa	Rorug01G0257500
rosa_samantha	Rh1AG271500 Rh1AG402900 Rh1BG238400 Rh1CG255300 Rh1DG266700
rosa_wichuraiana	Rw1G024200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	551, 1935
Acc36I	ACCTGC	1 cut(s)	316
AccB7I	CCANNNNNTGG	1 cut(s)	1868
AccBSI	CCGCTC	1 cut(s)	1357
AccI	GTMKAC	2 cut(s)	1626, 2006
AccII	CGCG	1 cut(s)	627
AciI	CCGC	9 cut(s)	477, 520, 603, 625, 820, 1200, 1357, 1800, 2227
AclI	AACGTT	1 cut(s)	1795
AclWI	GGATC	2 cut(s)	594, 657
AcoI	YGGCCR	3 cut(s)	172, 727, 2462
AcsI	RAATTY	4 cut(s)	940, 1152, 1837, 2297
AcuI	CTGAAG	5 cut(s)	282, 743, 1689, 1928, 2252
AfaI	GTAC	4 cut(s)	557, 880, 1044, 2097
AfiI	CCNNNNNNNGG	6 cut(s)	731, 736, 1864, 1868, 2070, 2219
AflIII	ACRYGT	1 cut(s)	908
AjiI	CACGTC	1 cut(s)	911
AjnI	CCWGG	5 cut(s)	117, 580, 724, 1290, 1614
Alw21I	GWGCWC	2 cut(s)	1876, 2281
Alw26I	GTCTC	2 cut(s)	285, 1426
Alw44I	GTGCAC	1 cut(s)	1872
AlwI	GGATC	2 cut(s)	594, 657
AlwNI	CAGNNNCTG	2 cut(s)	164, 1742
Ama87I	CYCGRG	1 cut(s)	2091
AoxI	GGCC	4 cut(s)	172, 727, 1359, 2462
ApaLI	GTGCAC	1 cut(s)	1872
ApoI	RAATTY	4 cut(s)	940, 1152, 1837, 2297
ArsI	GACNNNNNNTTYG	2 cut(s)	410, 442
Asp700I	GAANNNNTTC	2 cut(s)	2038, 2327
AspLEI	GCGC	1 cut(s)	851
AspS9I	GGNCC	2 cut(s)	26, 1359
AsuC2I	CCSGG	2 cut(s)	2092, 2093
AsuHPI	GGTGA	6 cut(s)	98, 977, 1298, 1486, 1630, 1769
AsuNHI	GCTAGC	1 cut(s)	530
AvaI	CYCGRG	1 cut(s)	2091
AvaII	GGWCC	1 cut(s)	26
BaeGI	GKGCMC	1 cut(s)	1876
BaeI	ACNNNNGTAYC	2 cut(s)	2087, 2120
BalI	TGGCCA	2 cut(s)	174, 2464
BarI	GAAGNNNNNNTAC	2 cut(s)	328, 360
BbsI	GAAGAC	3 cut(s)	81, 395, 684
Bbv12I	GWGCWC	2 cut(s)	1876, 2281
BbvCI	CCTCAGC	3 cut(s)	633, 672, 1971
BceAI	ACGGC	2 cut(s)	121, 589
BcgI	CGANNNNNNTGC	2 cut(s)	2056, 2090
BciT130I	CCWGG	5 cut(s)	119, 582, 726, 1292, 1616
BcnI	CCSGG	2 cut(s)	2092, 2093
BcoDI	GTCTC	2 cut(s)	285, 1426
BfaI	CTAG	6 cut(s)	146, 531, 984, 990, 1145, 1610
BfmI	CTRYAG	6 cut(s)	708, 1478, 1674, 1719, 1734, 1815
BfuAI	ACCTGC	1 cut(s)	316
BglII	AGATCT	1 cut(s)	544
BlpI	GCTNAGC	1 cut(s)	516
Bme1390I	CCNGG	7 cut(s)	119, 582, 726, 1292, 1616, 2092, 2093
Bme18I	GGWCC	1 cut(s)	26
BmeT110I	CYCGRG	1 cut(s)	2091
BmgBI	CACGTC	1 cut(s)	911
BmgT120I	GGNCC	2 cut(s)	26, 1359
BmiI	GGNNCC	2 cut(s)	28, 116
BmrFI	CCNGG	7 cut(s)	119, 582, 726, 1292, 1616, 2092, 2093
BmrI	ACTGGG	2 cut(s)	2165, 2208
BmsI	GCATC	6 cut(s)	91, 283, 502, 796, 821, 1532
BmtI	GCTAGC	1 cut(s)	534
BmuI	ACTGGG	2 cut(s)	2165, 2208
BoxI	GACNNNNGTC	1 cut(s)	2049
BpiI	GAAGAC	3 cut(s)	81, 395, 684
BplI	GAGNNNNNCTC	2 cut(s)	1346, 1378
BpmI	CTGGAG	3 cut(s)	210, 1142, 2325
Bpu10I	CCTNAGC	4 cut(s)	633, 672, 1347, 1971
Bpu1102I	GCTNAGC	1 cut(s)	516
BpuEI	CTTGAG	1 cut(s)	2120
BpuMI	CCSGG	2 cut(s)	2092, 2093
BsaAI	YACGTR	1 cut(s)	221
BsaJI	CCNNGG	9 cut(s)	175, 580, 581, 724, 730, 970, 1003, 2091, 2118
BsaWI	WCCGGW	1 cut(s)	384
Bsc4I	CCNNNNNNNGG	6 cut(s)	731, 736, 1864, 1868, 2070, 2219
Bse1I	ACTGG	5 cut(s)	741, 1862, 2160, 2195, 2214
Bse3DI	GCAATG	2 cut(s)	183, 1000
BseBI	CCWGG	5 cut(s)	119, 582, 726, 1292, 1616
BseDI	CCNNGG	9 cut(s)	175, 580, 581, 724, 730, 970, 1003, 2091, 2118
BseGI	GGATG	7 cut(s)	35, 175, 1286, 1300, 1342, 1873, 2296
BseLI	CCNNNNNNNGG	6 cut(s)	731, 736, 1864, 1868, 2070, 2219
BseMI	GCAATG	2 cut(s)	183, 1000
BseNI	ACTGG	5 cut(s)	741, 1862, 2160, 2195, 2214
BseSI	GKGCMC	1 cut(s)	1876
BsgI	GTGCAG	2 cut(s)	528, 723
Bsh1236I	CGCG	1 cut(s)	627
Bsh1285I	CGRYCG	1 cut(s)	454
BshFI	GGCC	4 cut(s)	174, 729, 1361, 2464
BsiEI	CGRYCG	1 cut(s)	454
BsiHKAI	GWGCWC	2 cut(s)	1876, 2281
BsiHKCI	CYCGRG	1 cut(s)	2091
BsiSI	CCGG	2 cut(s)	385, 2092
BsiWI	CGTACG	1 cut(s)	1042
BslFI	GGGAC	2 cut(s)	1450, 1653
BslI	CCNNNNNNNGG	6 cut(s)	731, 736, 1864, 1868, 2070, 2219
BsmAI	GTCTC	2 cut(s)	285, 1426
BsmFI	GGGAC	2 cut(s)	1450, 1653
BsmI	GAATGC	2 cut(s)	851, 2379
BsnI	GGCC	4 cut(s)	174, 729, 1361, 2464
BsoBI	CYCGRG	1 cut(s)	2091
Bsp1286I	GDGCHC	2 cut(s)	1876, 2281
Bsp143I	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
Bsp1720I	GCTNAGC	1 cut(s)	516
Bsp19I	CCATGG	2 cut(s)	175, 970
BspACI	CCGC	9 cut(s)	477, 520, 603, 625, 820, 1200, 1357, 1800, 2227
BspANI	GGCC	4 cut(s)	174, 729, 1361, 2464
BspFNI	CGCG	1 cut(s)	627
BspHI	TCATGA	1 cut(s)	936
BspLI	GGNNCC	2 cut(s)	28, 116
BspMAI	CTGCAG	5 cut(s)	712, 1482, 1678, 1723, 1738
BspMI	ACCTGC	1 cut(s)	316
BspOI	GCTAGC	1 cut(s)	534
BspPI	GGATC	2 cut(s)	594, 657
BsrBI	CCGCTC	1 cut(s)	1357
BsrDI	GCAATG	2 cut(s)	183, 1000
BsrI	ACTGG	5 cut(s)	741, 1862, 2160, 2195, 2214
BssECI	CCNNGG	9 cut(s)	175, 580, 581, 724, 730, 970, 1003, 2091, 2118
BssMI	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
BssNAI	GTATAC	1 cut(s)	1627
BssT1I	CCWWGG	3 cut(s)	175, 970, 2118
Bst1107I	GTATAC	1 cut(s)	1627
Bst2UI	CCWGG	5 cut(s)	119, 582, 726, 1292, 1616
Bst6I	CTCTTC	1 cut(s)	1702
BstAPI	GCANNNNNTGC	3 cut(s)	716, 1742, 1880
BstBAI	YACGTR	1 cut(s)	221
BstC8I	GCNNGC	9 cut(s)	298, 532, 1359, 1404, 1566, 1607, 2065, 2139, 2439
BstDSI	CCRYGG	3 cut(s)	175, 970, 1003
BstEII	GGTNACC	2 cut(s)	965, 1286
BstENI	CCTNNNNNAGG	2 cut(s)	729, 2068
BstF5I	GGATG	7 cut(s)	35, 175, 1286, 1300, 1342, 1873, 2296
BstFNI	CGCG	1 cut(s)	627
BstHHI	GCGC	1 cut(s)	851
BstKTI	GATC	8 cut(s)	35, 316, 496, 547, 589, 665, 1104, 2021
BstMAI	GTCTC	2 cut(s)	285, 1426
BstMBI	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
BstMCI	CGRYCG	1 cut(s)	454
BstNI	CCWGG	5 cut(s)	119, 582, 726, 1292, 1616
BstNSI	RCATGY	1 cut(s)	1880
BstPAI	GACNNNNGTC	1 cut(s)	2049
BstPI	GGTNACC	2 cut(s)	965, 1286
BstSCI	CCNGG	7 cut(s)	117, 580, 724, 1290, 1614, 2090, 2091
BstSFI	CTRYAG	6 cut(s)	708, 1478, 1674, 1719, 1734, 1815
BstSLI	GKGCMC	1 cut(s)	1876
BstUI	CGCG	1 cut(s)	627
BstV2I	GAAGAC	3 cut(s)	81, 395, 684
BstX2I	RGATCY	2 cut(s)	544, 586
BstYI	RGATCY	2 cut(s)	544, 586
BstZ17I	GTATAC	1 cut(s)	1627
BsuRI	GGCC	4 cut(s)	174, 729, 1361, 2464
BtgI	CCRYGG	3 cut(s)	175, 970, 1003
BtrI	CACGTC	1 cut(s)	911
BtsCI	GGATG	7 cut(s)	35, 175, 1286, 1300, 1342, 1873, 2296
BtsI	GCAGTG	3 cut(s)	1813, 1955, 2112
BtsIMutI	CAGTG	7 cut(s)	392, 1813, 1869, 1955, 2112, 2188, 2221
BveI	ACCTGC	1 cut(s)	316
Cac8I	GCNNGC	9 cut(s)	298, 532, 1359, 1404, 1566, 1607, 2065, 2139, 2439
CaiI	CAGNNNCTG	2 cut(s)	164, 1742
CciI	TCATGA	1 cut(s)	936
CfoI	GCGC	1 cut(s)	851
Cfr13I	GGNCC	2 cut(s)	26, 1359
Cfr9I	CCCGGG	1 cut(s)	2091
CseI	GACGC	2 cut(s)	1455, 2399
CsiI	ACCWGGT	2 cut(s)	117, 1614
Csp6I	GTAC	4 cut(s)	556, 879, 1043, 2096
CspCI	CAANNNNNGTGG	2 cut(s)	2197, 2232
CviAII	CATG	8 cut(s)	176, 838, 937, 971, 1352, 1780, 1877, 1887
CviQI	GTAC	4 cut(s)	556, 879, 1043, 2096
DpnI	GATC	8 cut(s)	34, 315, 495, 546, 588, 664, 1103, 2020
DpnII	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
DraI	TTTAAA	1 cut(s)	1771
EaeI	YGGCCR	3 cut(s)	172, 727, 2462
Eam1104I	CTCTTC	1 cut(s)	1702
EarI	CTCTTC	1 cut(s)	1702
EciI	GGCGGA	1 cut(s)	1215
Eco130I	CCWWGG	3 cut(s)	175, 970, 2118
Eco32I	GATATC	1 cut(s)	1488
Eco47I	GGWCC	1 cut(s)	26
Eco57I	CTGAAG	5 cut(s)	282, 743, 1689, 1928, 2252
Eco88I	CYCGRG	1 cut(s)	2091
Eco91I	GGTNACC	2 cut(s)	965, 1286
EcoNI	CCTNNNNNAGG	2 cut(s)	729, 2068
EcoO109I	RGGNCCY	1 cut(s)	26
EcoO65I	GGTNACC	2 cut(s)	965, 1286
EcoRI	GAATTC	1 cut(s)	940
EcoRII	CCWGG	5 cut(s)	117, 580, 724, 1290, 1614
EcoRV	GATATC	1 cut(s)	1488
EcoT14I	CCWWGG	3 cut(s)	175, 970, 2118
EcoT22I	ATGCAT	1 cut(s)	106
ErhI	CCWWGG	3 cut(s)	175, 970, 2118
FaeI	CATG	8 cut(s)	179, 841, 940, 974, 1355, 1783, 1880, 1890
FalI	AAGNNNNNCTT	4 cut(s)	2126, 2158, 2225, 2257
FaqI	GGGAC	2 cut(s)	1450, 1653
FatI	CATG	8 cut(s)	175, 837, 936, 970, 1351, 1779, 1876, 1886
FauI	CCCGC	2 cut(s)	513, 1350
FauNDI	CATATG	1 cut(s)	1237
FblI	GTMKAC	2 cut(s)	1626, 2006
FokI	GGATG	7 cut(s)	22, 182, 1293, 1307, 1349, 1880, 2303
FspBI	CTAG	6 cut(s)	146, 531, 984, 990, 1145, 1610
GlaI	GCGC	1 cut(s)	850
GsuI	CTGGAG	3 cut(s)	210, 1142, 2325
HaeIII	GGCC	4 cut(s)	174, 729, 1361, 2464
HapII	CCGG	2 cut(s)	385, 2092
HgaI	GACGC	2 cut(s)	1455, 2399
HhaI	GCGC	1 cut(s)	851
Hin1II	CATG	8 cut(s)	179, 841, 940, 974, 1355, 1783, 1880, 1890
Hin6I	GCGC	1 cut(s)	849
HinP1I	GCGC	1 cut(s)	849
HincII	GTYRAC	2 cut(s)	46, 1902
HindII	GTYRAC	2 cut(s)	46, 1902
HindIII	AAGCTT	2 cut(s)	2269, 2467
HpaI	GTTAAC	1 cut(s)	46
HpaII	CCGG	2 cut(s)	385, 2092
HphI	GGTGA	6 cut(s)	98, 977, 1298, 1486, 1630, 1769
Hpy188III	TCNNGA	9 cut(s)	65, 260, 761, 937, 1078, 1121, 1145, 2146, 2342
HpyAV	CCTTC	8 cut(s)	330, 349, 403, 681, 1190, 1786, 2117, 2152
HpyCH4IV	ACGT	3 cut(s)	220, 910, 1795
HpySE526I	ACGT	3 cut(s)	220, 910, 1795
Hsp92II	CATG	8 cut(s)	179, 841, 940, 974, 1355, 1783, 1880, 1890
HspAI	GCGC	1 cut(s)	849
KspAI	GTTAAC	1 cut(s)	46
Kzo9I	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
LmnI	GCTCC	7 cut(s)	238, 253, 595, 1123, 2284, 2344, 2459
LweI	GCATC	6 cut(s)	91, 283, 502, 796, 821, 1532
MabI	ACCWGGT	2 cut(s)	117, 1614
MaeI	CTAG	6 cut(s)	146, 531, 984, 990, 1145, 1610
MaeII	ACGT	3 cut(s)	220, 910, 1795
MaeIII	GTNAC	8 cut(s)	861, 965, 1132, 1206, 1286, 1492, 1501, 2237
MalI	GATC	8 cut(s)	34, 315, 495, 546, 588, 664, 1103, 2020
MbiI	CCGCTC	1 cut(s)	1357
MboI	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
MflI	RGATCY	2 cut(s)	544, 586
MhlI	GDGCHC	2 cut(s)	1876, 2281
MlsI	TGGCCA	2 cut(s)	174, 2464
MluCI	AATT	9 cut(s)	656, 776, 940, 1029, 1152, 1397, 1837, 2034, 2297
MluNI	TGGCCA	2 cut(s)	174, 2464
MlyI	GAGTC	6 cut(s)	1075, 1186, 1322, 1420, 1436, 2111
MmeI	TCCRAC	4 cut(s)	426, 448, 1258, 2078
Mox20I	TGGCCA	2 cut(s)	174, 2464
Mph1103I	ATGCAT	1 cut(s)	106
MroXI	GAANNNNTTC	2 cut(s)	2038, 2327
MscI	TGGCCA	2 cut(s)	174, 2464
MseI	TTAA	9 cut(s)	45, 81, 870, 1367, 1587, 1770, 2130, 2243, 2265
MslI	CAYNNNNRTG	2 cut(s)	219, 1335
Msp20I	TGGCCA	2 cut(s)	174, 2464
MspA1I	CMGCKG	7 cut(s)	479, 520, 707, 820, 1070, 1724, 1928
MspI	CCGG	2 cut(s)	385, 2092
MspR9I	CCNGG	7 cut(s)	119, 582, 726, 1292, 1616, 2092, 2093
Mva1269I	GAATGC	2 cut(s)	851, 2379
MvaI	CCWGG	5 cut(s)	119, 582, 726, 1292, 1616
MvnI	CGCG	1 cut(s)	627
NciI	CCSGG	2 cut(s)	2092, 2093
NcoI	CCATGG	2 cut(s)	175, 970
NdeI	CATATG	1 cut(s)	1237
NdeII	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
NheI	GCTAGC	1 cut(s)	530
NlaIII	CATG	8 cut(s)	179, 841, 940, 974, 1355, 1783, 1880, 1890
NlaIV	GGNNCC	2 cut(s)	28, 116
NmeAIII	GCCGAG	2 cut(s)	755, 1828
NmuCI	GTSAC	7 cut(s)	861, 965, 1132, 1286, 1492, 1501, 2237
NsiI	ATGCAT	1 cut(s)	106
NspI	RCATGY	1 cut(s)	1880
PagI	TCATGA	1 cut(s)	936
PasI	CCCWGGG	1 cut(s)	581
PctI	GAATGC	2 cut(s)	851, 2379
PdmI	GAANNNNTTC	2 cut(s)	2038, 2327
PfeI	GAWTC	4 cut(s)	12, 61, 161, 374
Pfl23II	CGTACG	1 cut(s)	1042
PflFI	GACNNNGTC	1 cut(s)	1312
PflMI	CCANNNNNTGG	1 cut(s)	1868
PleI	GAGTC	6 cut(s)	1075, 1185, 1321, 1419, 1435, 2110
PpsI	GAGTC	6 cut(s)	1075, 1185, 1321, 1419, 1435, 2110
Ppu21I	YACGTR	1 cut(s)	221
PpuMI	RGGWCCY	1 cut(s)	26
PshAI	GACNNNNGTC	1 cut(s)	2049
PsiI	TTATAA	2 cut(s)	551, 1935
Psp1406I	AACGTT	1 cut(s)	1795
Psp5II	RGGWCCY	1 cut(s)	26
Psp6I	CCWGG	5 cut(s)	117, 580, 724, 1290, 1614
PspEI	GGTNACC	2 cut(s)	965, 1286
PspGI	CCWGG	5 cut(s)	117, 580, 724, 1290, 1614
PspLI	CGTACG	1 cut(s)	1042
PspN4I	GGNNCC	2 cut(s)	28, 116
PspPI	GGNCC	2 cut(s)	26, 1359
PspPPI	RGGWCCY	1 cut(s)	26
PstI	CTGCAG	5 cut(s)	712, 1482, 1678, 1723, 1738
PstNI	CAGNNNCTG	2 cut(s)	164, 1742
PsuI	RGATCY	2 cut(s)	544, 586
PsyI	GACNNNGTC	1 cut(s)	1312
PvuII	CAGCTG	4 cut(s)	707, 1070, 1724, 1928
RsaI	GTAC	4 cut(s)	557, 880, 1044, 2097
RsaNI	GTAC	4 cut(s)	556, 879, 1043, 2096
RseI	CAYNNNNRTG	2 cut(s)	219, 1335
SaqAI	TTAA	9 cut(s)	45, 81, 870, 1367, 1587, 1770, 2130, 2243, 2265
Sau3AI	GATC	8 cut(s)	32, 313, 493, 544, 586, 662, 1101, 2018
Sau96I	GGNCC	2 cut(s)	26, 1359
SchI	GAGTC	6 cut(s)	1075, 1186, 1322, 1420, 1436, 2111
ScrFI	CCNGG	7 cut(s)	119, 582, 726, 1292, 1616, 2092, 2093
SduI	GDGCHC	2 cut(s)	1876, 2281
SexAI	ACCWGGT	2 cut(s)	117, 1614
SfaNI	GCATC	6 cut(s)	91, 283, 502, 796, 821, 1532
SfcI	CTRYAG	6 cut(s)	708, 1478, 1674, 1719, 1734, 1815
SinI	GGWCC	1 cut(s)	26
SmaI	CCCGGG	1 cut(s)	2093
SmiMI	CAYNNNNRTG	2 cut(s)	219, 1335
SmlI	CTYRAG	2 cut(s)	2099, 2470
SmoI	CTYRAG	2 cut(s)	2099, 2470
Sse9I	AATT	9 cut(s)	656, 776, 940, 1029, 1152, 1397, 1837, 2034, 2297
SsiI	CCGC	9 cut(s)	477, 520, 603, 625, 820, 1200, 1357, 1800, 2227
SspMI	CTAG	6 cut(s)	146, 531, 984, 990, 1145, 1610
StyD4I	CCNGG	7 cut(s)	117, 580, 724, 1290, 1614, 2090, 2091
StyI	CCWWGG	3 cut(s)	175, 970, 2118
TaiI	ACGT	3 cut(s)	223, 913, 1798
TaqI	TCGA	2 cut(s)	1516, 2364
TasI	AATT	9 cut(s)	656, 776, 940, 1029, 1152, 1397, 1837, 2034, 2297
TauI	GCSGC	2 cut(s)	627, 2230
TfiI	GAWTC	4 cut(s)	12, 61, 161, 374
Tru1I	TTAA	9 cut(s)	45, 81, 870, 1367, 1587, 1770, 2130, 2243, 2265
Tru9I	TTAA	9 cut(s)	45, 81, 870, 1367, 1587, 1770, 2130, 2243, 2265
TscAI	CASTG	7 cut(s)	399, 1813, 1869, 1955, 2119, 2195, 2221
TseFI	GTSAC	7 cut(s)	861, 965, 1132, 1286, 1492, 1501, 2237
Tsp45I	GTSAC	7 cut(s)	861, 965, 1132, 1286, 1492, 1501, 2237
TspMI	CCCGGG	1 cut(s)	2091
TspRI	CASTG	7 cut(s)	399, 1813, 1869, 1955, 2119, 2195, 2221
Tth111I	GACNNNGTC	1 cut(s)	1312
Van91I	CCANNNNNTGG	1 cut(s)	1868
VneI	GTGCAC	1 cut(s)	1872
VpaK11BI	GGWCC	1 cut(s)	26
XagI	CCTNNNNNAGG	2 cut(s)	729, 2068
XapI	RAATTY	4 cut(s)	940, 1152, 1837, 2297
XbaI	TCTAGA	1 cut(s)	1144
XceI	RCATGY	1 cut(s)	1880
XmaI	CCCGGG	1 cut(s)	2091
XmiI	GTMKAC	2 cut(s)	1626, 2006
XmnI	GAANNNNTTC	2 cut(s)	2038, 2327
XspI	CTAG	6 cut(s)	146, 531, 984, 990, 1145, 1610
Zsp2I	ATGCAT	1 cut(s)	106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.