Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0006252

Physical Location & Seq

Genomic Coordinates Reverse (-)

51996697 .. 52006144

Gene Structure 9448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG255300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGTTCTATGGCGAAGAAGAAAGAGGCGAACTTGGAGTCTCTGCTACTCTCTCAATTCCAATAGAGATGAAAGAGAGTAGAGATGGAATCAAGAGCGACAGACGTGCGAAAAATTCATCAGTTAGCTCACTTCCACTCATCTTGGACATAGACGACTTTAAGGGTGAATTTTCATTTGATGCATTGTTTGGAAACCTGGTAAATGATCTCCTCCCATCCTTTCAAGAAGATGAAACAGATTCATCTGAGGGTCATAGCAACATCAGCGGGACTGACTCTTTGCCAAATGGACATATGCGAGCTCCATCAGATGCAACAAGATTTGCGCAGGGAGTGTCTGACCCTTTATTTCCAGAAGTAGATAAGATCTTATCTCTGTTCAAGGATTCTTGTAAGGAGTTGGTTGATCTCCAGACACAGATTGATGGAAAGCTATTAAATCTTAAGAAGGATGTTTCTGTACAAGATTCTAAGCACCGCAAGACACTTACTGAGCTTGAAAAAGGAGTAGACGGCTTGTTTGGTAGCTTTGCCAGGTTGGATTCACGTATATCAAGTGTTGGACAGACTGCTGCAAAAATAGGAGATCATCTGCAGAGTGCAGATGCTCAGCGGGAAACTGCTAGTCAATCAATAGAGCTCATAAAGTACTTGATGGAGTTTAATAGCAGCCCAGGCGATCTAATGGAACTTTCACCTCTATTTTCCGATGACAGTCGTGTTGCAGAGGCTGCTAAAATTGCACAAAAACTGAGGGCATTTGCTGAGGAAGATATTGGAAGAACTGTACCATCGGTCATGGGCAATGCAGCTGCTAGCAGAGGATTAGAAGTTGCAGTTGCTAATCTTCAGGAGTACTGTAACGAATTGGAGAACAGACTGCTAGCTCGATTTGATGCCGCATCACAGAGAAGAGATTTGTCTACCATGGCAGAATGTGCTAAAATTTTATCTCAGTTTAACAGGGGAACTAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGACGTGGAAGTCATGAATGCAGATACCAGATTGGTTCTTGGTGACGAGGGTTCCCAGGCTAGTCCTAGCAATGTTTCTCGTGGACTTTCTTCCTTGTACAAAGAAATCACAGATACTGTACGGAAGGAAGCAGCAACAATTATGGCTGTATTCCCTTCTCCTAATGAAGTTATGTCAATCTTAGTTCAGCGAGTTTTAGAGCAGAGAATTACAGCTTTATTGGACAAATTATTGGTAAAACCATCTCTCGTGAACCTACCTCCTATGGAAGAAGGGGGCCTTCTATTATATCTTAGAATGCTAGCGGTGGCATATGAGAAGACGCAAGATCTTGCTAAGGACCTGCGAGCCGTGGGATGTGGTGACTTGGATGTCGAGGGCCTCACAGAGTCTTTGTTTTCTGCTCACAAGGATGGATATCCTGAACATGAGCAGGCCTCTCTTAAGCAACTATATCAAGCTAAGATGGCAGAACTACGCGCTGAAAGCCAGCAGACATCTGAATCAAGTGGAACAATCGGGCGCTCAAAAGGGGCAGCACCTGCAACCCTTGCAGCAAATGTAAAATTGGTGTTCACTTCGCTCCTAGGCCAAGTCAGTAAATATATAACAGAAGGTCTTGAACGAGCAAGAGACAGCTTGACTGAAGCTGCATCTTTAAGGGAAAGATTTGTATTGGGTACTAGTATGAGTAGAAGGGTGGCTGCTGCAGCTGCTTCTGCTGCAGAAGCTGCTGCTGCTGCTGGTGAAAGCAGTTTCAGATCTTTCATGGTTGCTGTACAACGTTGTGGTAGCAGTGTGGCTATAGTTCAGCAATATTTTTCAAATTCTATCTCTCGGCTTCTACTCCCTGTTGATGGAGCGCATGCTGCTTCATGTGAAGAAATGGCAACAGCTATGTCAAGTGCGGAGGGTGCTGCATATAAAGGGCTTCAACAATGTATTGAAACTGTGATGGCTGAGGTGGAGCGGTTACTTTCTTCTGAACAGAAGGCAACAGATTACAGATCACCAGAAGATGGATTTGCTCCTGATCATCGGCCGACAAATGCCTGCACGAGAGTTGTAGCTTATCTTTCCCGTATACTAGAATCTGCATTCTCAGCACTTGAGGGTCTTAACAAGCAAGCATTTTTGACTGAATTAGGAAATCGCTTGCATAAAGGGCTACTAACACATTGGCAGAAGTTCACTTTCAATCCCAGTGGAGGATTACGGCTGAAGCGTGACATAACTGAATATGGAGAATTTGTGCGCAGTTTTAATGCTCCTTCTGTTGATGAAAAATTTGAATTGCTTGGCATAATGGCCAATGTCTTTATTGTTGCTCCTGAAAGTCTCTCAACTCTGTTTGAGGGTACCCCCAGTATACGGAAAGATGCACAGAGGTTTATTGAGCTTAGAGATGACTACAAGAGTGCAAAACTTGCTTCCAGACTTAGTTCCTTGTGGGCAAGCTCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005938 GO:0006810 GO:0006887 GO:0006892 GO:0006893 GO:0008150 GO:0009987 GO:0016192 GO:0031982 GO:0032940 GO:0032991 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048193 GO:0051179 GO:0051234 GO:0070062 GO:0071944 GO:0098876 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec10

Protein Analysis

826

Amino Acids

90.03

Weight (kDa)

5.19

Isoelectric Point (pI)

48.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec10_N	PF20667	121 - 237	5.6e-31	Exocyst complex component Sec10, N-terminal
Sec10_HB	PF07393	243 - 503	7.7e-64	Exocyst complex component Sec10-like, alpha-helical bundle
Sec10_HB	PF07393	519 - 816	1.3e-76	Exocyst complex component Sec10-like, alpha-helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12370 AT5G12370 AT5G12370
fragaria_vesca	FvH4_7g15330 FvH4_7g15330 FvH4_7g15330 FvH4_7g15330
malus_domestica	MD01G1071200.v1.1 MD07G1131500.v1.1
prunus_persica	Prupe.2G177200_v2.0.a1
pyrus_communis	pycom01g10010 pycom07g12840
rosa_chinensis	RchiOBHm_Chr1g0357661 RchiOBHm_Chr1g0375651 RchiOBHm_Chr1g0375661
rosa_laevigata	RLG00000028010
rosa_multiflora	Rmu_sc0001644.1_g000021 Rmu_sc0004683.1_g000003
rosa_roxburghii	Rroxscaffold_4G00282690 Rroxscaffold_4G00298660
rosa_rugosa	Rorug01G0257500
rosa_samantha	Rh1AG271500 Rh1AG402900 Rh1BG238400 Rh1CG255300 Rh1DG266700
rosa_wichuraiana	Rw1G024200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1564
AasI	GACNNNNNNGTC	2 cut(s)	1022, 1385
Acc16I	TGCGCA	2 cut(s)	327, 2270
Acc36I	ACCTGC	2 cut(s)	1365, 1564
Acc65I	GGTACC	1 cut(s)	2372
AccB1I	GGYRCC	1 cut(s)	2372
AccB7I	CCANNNNNTGG	1 cut(s)	2033
AccBSI	CCGCTC	1 cut(s)	1984
AccI	GTMKAC	4 cut(s)	510, 923, 2098, 2383
AccII	CGCG	1 cut(s)	1494
AciI	CCGC	7 cut(s)	267, 478, 613, 900, 1319, 1922, 1984
AclI	AACGTT	1 cut(s)	1798
AcoI	YGGCCR	2 cut(s)	2054, 2322
AcsI	RAATTY	6 cut(s)	112, 167, 945, 1840, 2261, 2300
AcuI	CTGAAG	3 cut(s)	833, 1680, 2255
AfaI	GTAC	9 cut(s)	462, 650, 789, 857, 1112, 1134, 1696, 1794, 2374
AfiI	CCNNNNNNNGG	4 cut(s)	1871, 2033, 2222, 2385
AflII	CTTAAG	2 cut(s)	443, 1457
AflIII	ACRYGT	1 cut(s)	998
AgsI	TTSAA	9 cut(s)	224, 382, 500, 1637, 1839, 1949, 1961, 2212, 2306
AhlI	ACTAGT	2 cut(s)	971, 1697
AjiI	CACGTC	3 cut(s)	104, 1001, 1018
AjnI	CCWGG	4 cut(s)	195, 533, 673, 1068
Alw21I	GWGCWC	2 cut(s)	304, 642
Alw26I	GTCTC	3 cut(s)	43, 1641, 2357
AlwNI	CAGNNNCTG	4 cut(s)	731, 1130, 1556, 1745
AoxI	GGCC	6 cut(s)	1291, 1393, 1449, 1603, 2054, 2322
ApoI	RAATTY	6 cut(s)	112, 167, 945, 1840, 2261, 2300
ArsI	GACNNNNNNTTYG	6 cut(s)	21, 53, 262, 294, 503, 535
Asp718I	GGTACC	1 cut(s)	2372
AspA2I	CCTAGG	1 cut(s)	1600
AspLEI	GCGC	5 cut(s)	328, 1496, 1539, 1879, 2271
AspS9I	GGNCC	3 cut(s)	1291, 1354, 1393
AsuHPI	GGTGA	6 cut(s)	176, 687, 1067, 1388, 1772, 2016
AsuNHI	GCTAGC	3 cut(s)	815, 883, 1315
AvaII	GGWCC	1 cut(s)	1354
AvrII	CCTAGG	1 cut(s)	1600
BalI	TGGCCA	1 cut(s)	2324
BanI	GGYRCC	1 cut(s)	2372
BanII	GRGCYC	2 cut(s)	304, 642
BauI	CACGAG	3 cut(s)	1092, 1262, 2071
BbsI	GAAGAC	1 cut(s)	1340
Bbv12I	GWGCWC	2 cut(s)	304, 642
BbvCI	CCTCAGC	2 cut(s)	765, 1974
BceAI	ACGGC	3 cut(s)	529, 1349, 2246
BcgI	CGANNNNNNTGC	2 cut(s)	86, 120
BciT130I	CCWGG	4 cut(s)	197, 535, 675, 1070
BclI	TGATCA	1 cut(s)	2047
BcoDI	GTCTC	3 cut(s)	43, 1641, 2357
BcuI	ACTAGT	2 cut(s)	971, 1697
BfmI	CTRYAG	4 cut(s)	593, 1722, 1737, 1818
BfoI	RGCGCY	1 cut(s)	1540
BfrI	CTTAAG	2 cut(s)	443, 1457
BfuAI	ACCTGC	2 cut(s)	1365, 1564
BglII	AGATCT	3 cut(s)	366, 1342, 1775
BlnI	CCTAGG	1 cut(s)	1600
BlpI	GCTNAGC	1 cut(s)	609
BmcAI	AGTACT	2 cut(s)	650, 857
Bme1390I	CCNGG	4 cut(s)	197, 535, 675, 1070
Bme18I	GGWCC	1 cut(s)	1354
BmgBI	CACGTC	3 cut(s)	104, 1001, 1018
BmgT120I	GGNCC	3 cut(s)	1291, 1354, 1393
BmiI	GGNNCC	3 cut(s)	1066, 1292, 2374
BmrFI	CCNGG	4 cut(s)	197, 535, 675, 1070
BmrI	ACTGGG	2 cut(s)	2211, 2373
BmsI	GCATC	7 cut(s)	169, 301, 595, 886, 911, 1676, 2383
BmtI	GCTAGC	3 cut(s)	819, 887, 1319
BmuI	ACTGGG	2 cut(s)	2211, 2373
BpiI	GAAGAC	1 cut(s)	1340
BplI	GAGNNNNNCTC	2 cut(s)	1436, 1468
BpmI	CTGGAG	1 cut(s)	395
Bpu10I	CCTNAGC	4 cut(s)	765, 1350, 1974, 2473
Bpu1102I	GCTNAGC	1 cut(s)	609
BpuEI	CTTGAG	1 cut(s)	2144
BsaAI	YACGTR	1 cut(s)	548
BsaBI	GATNNNNATC	1 cut(s)	1431
BsaJI	CCNNGG	5 cut(s)	673, 927, 1068, 1365, 1600
BsaXI	ACNNNNNCTCC	2 cut(s)	2250, 2280
Bsc4I	CCNNNNNNNGG	4 cut(s)	1871, 2033, 2222, 2385
Bse1I	ACTGG	2 cut(s)	2217, 2379
Bse3DI	GCAATG	2 cut(s)	811, 1090
Bse8I	GATNNNNATC	1 cut(s)	1431
BseBI	CCWGG	4 cut(s)	197, 535, 675, 1070
BseDI	CCNNGG	5 cut(s)	673, 927, 1068, 1365, 1600
BseGI	GGATG	5 cut(s)	215, 457, 1376, 1390, 1432
BseJI	GATNNNNATC	1 cut(s)	1431
BseLI	CCNNNNNNNGG	4 cut(s)	1871, 2033, 2222, 2385
BseMI	GCAATG	2 cut(s)	811, 1090
BseMII	CTCAG	8 cut(s)	237, 483, 623, 743, 756, 968, 1965, 2130
BseNI	ACTGG	2 cut(s)	2217, 2379
BseRI	GAGGAG	1 cut(s)	200
BseX3I	CGGCCG	1 cut(s)	2054
BsgI	GTGCAG	2 cut(s)	621, 2053
Bsh1236I	CGCG	1 cut(s)	1494
Bsh1285I	CGRYCG	1 cut(s)	2057
BshFI	GGCC	6 cut(s)	1293, 1395, 1451, 1605, 2056, 2324
BshNI	GGYRCC	1 cut(s)	2372
BsiEI	CGRYCG	1 cut(s)	2057
BsiHKAI	GWGCWC	2 cut(s)	304, 642
BslFI	GGGAC	1 cut(s)	283
BslI	CCNNNNNNNGG	4 cut(s)	1871, 2033, 2222, 2385
BsmAI	GTCTC	3 cut(s)	43, 1641, 2357
BsmFI	GGGAC	1 cut(s)	283
BsmI	GAATGC	3 cut(s)	1036, 1317, 2111
BsnI	GGCC	6 cut(s)	1293, 1395, 1451, 1605, 2056, 2324
Bsp1286I	GDGCHC	2 cut(s)	304, 642
Bsp1407I	TGTACA	3 cut(s)	460, 1110, 1792
Bsp143I	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
Bsp1720I	GCTNAGC	1 cut(s)	609
Bsp19I	CCATGG	1 cut(s)	927
BspACI	CCGC	7 cut(s)	267, 478, 613, 900, 1319, 1922, 1984
BspANI	GGCC	6 cut(s)	1293, 1395, 1451, 1605, 2056, 2324
BspCNI	CTCAG	8 cut(s)	238, 484, 622, 744, 757, 967, 1966, 2129
BspFNI	CGCG	1 cut(s)	1494
BspHI	TCATGA	1 cut(s)	1026
BspLI	GGNNCC	3 cut(s)	1066, 1292, 2374
BspMAI	CTGCAG	3 cut(s)	597, 1726, 1741
BspMI	ACCTGC	2 cut(s)	1365, 1564
BspOI	GCTAGC	3 cut(s)	819, 887, 1319
BspT107I	GGYRCC	1 cut(s)	2372
BspTI	CTTAAG	2 cut(s)	443, 1457
BsrBI	CCGCTC	1 cut(s)	1984
BsrDI	GCAATG	2 cut(s)	811, 1090
BsrGI	TGTACA	3 cut(s)	460, 1110, 1792
BsrI	ACTGG	2 cut(s)	2217, 2379
BssECI	CCNNGG	5 cut(s)	673, 927, 1068, 1365, 1600
BssMI	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
BssNAI	GTATAC	2 cut(s)	2099, 2384
BssSI	CACGAG	3 cut(s)	1092, 1262, 2071
BssT1I	CCWWGG	2 cut(s)	927, 1600
Bst1107I	GTATAC	2 cut(s)	2099, 2384
Bst2BI	CACGAG	3 cut(s)	1092, 1262, 2071
Bst2UI	CCWGG	4 cut(s)	197, 535, 675, 1070
Bst4CI	ACNGT	5 cut(s)	716, 787, 860, 1132, 1966
Bst6I	CTCTTC	1 cut(s)	907
BstAFI	CTTAAG	2 cut(s)	443, 1457
BstAPI	GCANNNNNTGC	6 cut(s)	731, 938, 1556, 1565, 1745, 2441
BstAUI	TGTACA	3 cut(s)	460, 1110, 1792
BstBAI	YACGTR	1 cut(s)	548
BstDSI	CCRYGG	2 cut(s)	927, 1365
BstF5I	GGATG	5 cut(s)	215, 457, 1376, 1390, 1432
BstFNI	CGCG	1 cut(s)	1494
BstH2I	RGCGCY	1 cut(s)	1540
BstHHI	GCGC	5 cut(s)	328, 1496, 1539, 1879, 2271
BstKTI	GATC	9 cut(s)	208, 369, 409, 589, 682, 1345, 1778, 2024, 2050
BstMAI	GTCTC	3 cut(s)	43, 1641, 2357
BstMBI	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
BstMCI	CGRYCG	1 cut(s)	2057
BstNI	CCWGG	4 cut(s)	197, 535, 675, 1070
BstNSI	RCATGY	1 cut(s)	1883
BstSCI	CCNGG	4 cut(s)	195, 533, 673, 1068
BstSFI	CTRYAG	4 cut(s)	593, 1722, 1737, 1818
BstUI	CGCG	1 cut(s)	1494
BstV2I	GAAGAC	1 cut(s)	1340
BstX2I	RGATCY	3 cut(s)	366, 1342, 1775
BstYI	RGATCY	3 cut(s)	366, 1342, 1775
BstZ17I	GTATAC	2 cut(s)	2099, 2384
BstZI	CGGCCG	1 cut(s)	2054
BsuRI	GGCC	6 cut(s)	1293, 1395, 1451, 1605, 2056, 2324
BtgI	CCRYGG	2 cut(s)	927, 1365
BtrI	CACGTC	3 cut(s)	104, 1001, 1018
BtsCI	GGATG	5 cut(s)	215, 457, 1376, 1390, 1432
BtsI	GCAGTG	1 cut(s)	1816
BtsIMutI	CAGTG	2 cut(s)	1816, 2224
BveI	ACCTGC	2 cut(s)	1365, 1564
CaiI	CAGNNNCTG	4 cut(s)	731, 1130, 1556, 1745
CciI	TCATGA	1 cut(s)	1026
CfoI	GCGC	5 cut(s)	328, 1496, 1539, 1879, 2271
Cfr13I	GGNCC	3 cut(s)	1291, 1354, 1393
CseI	GACGC	1 cut(s)	1345
CsiI	ACCWGGT	1 cut(s)	195
Csp6I	GTAC	9 cut(s)	461, 649, 788, 856, 1111, 1133, 1695, 1793, 2373
CspCI	CAANNNNNGTGG	4 cut(s)	123, 158, 2200, 2235
CviAII	CATG	8 cut(s)	799, 928, 979, 1027, 1442, 1783, 1880, 1890
CviQI	GTAC	9 cut(s)	461, 649, 788, 856, 1111, 1133, 1695, 1793, 2373
DpnI	GATC	9 cut(s)	207, 368, 408, 588, 681, 1344, 1777, 2023, 2049
DpnII	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
DrdI	GACNNNNNNGTC	2 cut(s)	1022, 1385
DseDI	GACNNNNNNGTC	2 cut(s)	1022, 1385
EaeI	YGGCCR	2 cut(s)	2054, 2322
EagI	CGGCCG	1 cut(s)	2054
Eam1104I	CTCTTC	1 cut(s)	907
EarI	CTCTTC	1 cut(s)	907
Ecl136II	GAGCTC	2 cut(s)	302, 640
EclXI	CGGCCG	1 cut(s)	2054
Eco130I	CCWWGG	2 cut(s)	927, 1600
Eco147I	AGGCCT	1 cut(s)	1451
Eco24I	GRGCYC	2 cut(s)	304, 642
Eco32I	GATATC	1 cut(s)	1433
Eco47I	GGWCC	1 cut(s)	1354
Eco52I	CGGCCG	1 cut(s)	2054
Eco53kI	GAGCTC	2 cut(s)	302, 640
Eco57I	CTGAAG	3 cut(s)	833, 1680, 2255
EcoICRI	GAGCTC	2 cut(s)	302, 640
EcoO109I	RGGNCCY	3 cut(s)	1291, 1354, 1393
EcoRII	CCWGG	4 cut(s)	195, 533, 673, 1068
EcoRV	GATATC	1 cut(s)	1433
EcoT14I	CCWWGG	2 cut(s)	927, 1600
EcoT22I	ATGCAT	1 cut(s)	184
EcoT38I	GRGCYC	2 cut(s)	304, 642
ErhI	CCWWGG	2 cut(s)	927, 1600
FaeI	CATG	8 cut(s)	802, 931, 982, 1030, 1445, 1786, 1883, 1893
FalI	AAGNNNNNCTT	2 cut(s)	1278, 1310
FaqI	GGGAC	1 cut(s)	283
FatI	CATG	8 cut(s)	798, 927, 978, 1026, 1441, 1782, 1879, 1889
FauI	CCCGC	2 cut(s)	260, 606
FauNDI	CATATG	2 cut(s)	294, 1327
FbaI	TGATCA	1 cut(s)	2047
FblI	GTMKAC	4 cut(s)	510, 923, 2098, 2383
FokI	GGATG	5 cut(s)	202, 464, 1383, 1397, 1439
FriOI	GRGCYC	2 cut(s)	304, 642
FspI	TGCGCA	2 cut(s)	327, 2270
GlaI	GCGC	5 cut(s)	327, 1495, 1538, 1878, 2270
GsuI	CTGGAG	1 cut(s)	395
HaeII	RGCGCY	1 cut(s)	1540
HaeIII	GGCC	6 cut(s)	1293, 1395, 1451, 1605, 2056, 2324
HgaI	GACGC	1 cut(s)	1345
HhaI	GCGC	5 cut(s)	328, 1496, 1539, 1879, 2271
Hin1II	CATG	8 cut(s)	802, 931, 982, 1030, 1445, 1786, 1883, 1893
Hin6I	GCGC	5 cut(s)	326, 1494, 1537, 1877, 2269
HinP1I	GCGC	5 cut(s)	326, 1494, 1537, 1877, 2269
HphI	GGTGA	6 cut(s)	176, 687, 1067, 1388, 1772, 2016
Hpy166II	GTNNAC	8 cut(s)	511, 924, 1097, 1267, 1590, 2099, 2205, 2384
Hpy188I	TCNGA	7 cut(s)	247, 310, 340, 709, 1516, 1775, 1999
Hpy8I	GTNNAC	8 cut(s)	511, 924, 1097, 1267, 1590, 2099, 2205, 2384
HpyAV	CCTTC	9 cut(s)	442, 1132, 1179, 1280, 1304, 1622, 1704, 1999, 2295
HpyCH4III	ACNGT	5 cut(s)	716, 787, 860, 1132, 1966
HpyCH4IV	ACGT	5 cut(s)	103, 547, 1000, 1017, 1798
HpySE526I	ACGT	5 cut(s)	103, 547, 1000, 1017, 1798
Hsp92II	CATG	8 cut(s)	802, 931, 982, 1030, 1445, 1786, 1883, 1893
HspAI	GCGC	5 cut(s)	326, 1494, 1537, 1877, 2269
KpnI	GGTACC	1 cut(s)	2376
Ksp22I	TGATCA	1 cut(s)	2047
Kzo9I	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
LmnI	GCTCC	7 cut(s)	307, 1602, 1874, 1981, 2047, 2287, 2347
LweI	GCATC	7 cut(s)	169, 301, 595, 886, 911, 1676, 2383
MabI	ACCWGGT	1 cut(s)	195
MaeII	ACGT	5 cut(s)	103, 547, 1000, 1017, 1798
MaeIII	GTNAC	5 cut(s)	860, 1055, 1376, 1986, 2240
MalI	GATC	9 cut(s)	207, 368, 408, 588, 681, 1344, 1777, 2023, 2049
MbiI	CCGCTC	1 cut(s)	1984
MboI	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
MflI	RGATCY	3 cut(s)	366, 1342, 1775
MhlI	GDGCHC	2 cut(s)	304, 642
MlsI	TGGCCA	1 cut(s)	2324
MluNI	TGGCCA	1 cut(s)	2324
MlyI	GAGTC	3 cut(s)	45, 269, 1412
MmeI	TCCRAC	2 cut(s)	519, 541
Mox20I	TGGCCA	1 cut(s)	2324
Mph1103I	ATGCAT	1 cut(s)	184
MscI	TGGCCA	1 cut(s)	2324
MseI	TTAA	9 cut(s)	159, 437, 444, 663, 960, 1458, 1673, 2133, 2277
MslI	CAYNNNNRTG	1 cut(s)	1425
Msp20I	TGGCCA	1 cut(s)	2324
MspA1I	CMGCKG	4 cut(s)	267, 613, 812, 1727
MspCI	CTTAAG	2 cut(s)	443, 1457
MspR9I	CCNGG	4 cut(s)	197, 535, 675, 1070
Mva1269I	GAATGC	3 cut(s)	1036, 1317, 2111
MvaI	CCWGG	4 cut(s)	197, 535, 675, 1070
MvnI	CGCG	1 cut(s)	1494
NcoI	CCATGG	1 cut(s)	927
NdeI	CATATG	2 cut(s)	294, 1327
NdeII	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
NheI	GCTAGC	3 cut(s)	815, 883, 1315
NlaIII	CATG	8 cut(s)	802, 931, 982, 1030, 1445, 1786, 1883, 1893
NlaIV	GGNNCC	3 cut(s)	1066, 1292, 2374
NmeAIII	GCCGAG	1 cut(s)	1831
NmuCI	GTSAC	3 cut(s)	1055, 1376, 2240
NsbI	TGCGCA	2 cut(s)	327, 2270
NsiI	ATGCAT	1 cut(s)	184
NspI	RCATGY	1 cut(s)	1883
PaeI	GCATGC	1 cut(s)	1883
PagI	TCATGA	1 cut(s)	1026
PaqCI	CACCTGC	1 cut(s)	1564
PceI	AGGCCT	1 cut(s)	1451
PcsI	WCGNNNNNNNCGW	1 cut(s)	2236
PctI	GAATGC	3 cut(s)	1036, 1317, 2111
PfeI	GAWTC	7 cut(s)	87, 239, 386, 467, 542, 1517, 2105
PflMI	CCANNNNNTGG	1 cut(s)	2033
PleI	GAGTC	3 cut(s)	44, 269, 1411
PpsI	GAGTC	3 cut(s)	44, 269, 1411
Ppu21I	YACGTR	1 cut(s)	548
PpuMI	RGGWCCY	1 cut(s)	1354
Psp124BI	GAGCTC	2 cut(s)	304, 642
Psp1406I	AACGTT	1 cut(s)	1798
Psp5II	RGGWCCY	1 cut(s)	1354
Psp6I	CCWGG	4 cut(s)	195, 533, 673, 1068
PspGI	CCWGG	4 cut(s)	195, 533, 673, 1068
PspN4I	GGNNCC	3 cut(s)	1066, 1292, 2374
PspPI	GGNCC	3 cut(s)	1291, 1354, 1393
PspPPI	RGGWCCY	1 cut(s)	1354
PstI	CTGCAG	3 cut(s)	597, 1726, 1741
PstNI	CAGNNNCTG	4 cut(s)	731, 1130, 1556, 1745
PsuI	RGATCY	3 cut(s)	366, 1342, 1775
PvuII	CAGCTG	2 cut(s)	812, 1727
RsaI	GTAC	9 cut(s)	462, 650, 789, 857, 1112, 1134, 1696, 1794, 2374
RsaNI	GTAC	9 cut(s)	461, 649, 788, 856, 1111, 1133, 1695, 1793, 2373
RseI	CAYNNNNRTG	1 cut(s)	1425
SacI	GAGCTC	2 cut(s)	304, 642
SaqAI	TTAA	9 cut(s)	159, 437, 444, 663, 960, 1458, 1673, 2133, 2277
Sau3AI	GATC	9 cut(s)	205, 366, 406, 586, 679, 1342, 1775, 2021, 2047
Sau96I	GGNCC	3 cut(s)	1291, 1354, 1393
ScaI	AGTACT	2 cut(s)	650, 857
SchI	GAGTC	3 cut(s)	45, 269, 1412
ScrFI	CCNGG	4 cut(s)	197, 535, 675, 1070
SduI	GDGCHC	2 cut(s)	304, 642
SexAI	ACCWGGT	1 cut(s)	195
SfaNI	GCATC	7 cut(s)	169, 301, 595, 886, 911, 1676, 2383
SfcI	CTRYAG	4 cut(s)	593, 1722, 1737, 1818
SinI	GGWCC	1 cut(s)	1354
SmiMI	CAYNNNNRTG	1 cut(s)	1425
SmlI	CTYRAG	3 cut(s)	443, 1457, 2123
SmoI	CTYRAG	3 cut(s)	443, 1457, 2123
SpeI	ACTAGT	2 cut(s)	971, 1697
SphI	GCATGC	1 cut(s)	1883
SseBI	AGGCCT	1 cut(s)	1451
SsiI	CCGC	7 cut(s)	267, 478, 613, 900, 1319, 1922, 1984
SspI	AATATT	1 cut(s)	1832
SstI	GAGCTC	2 cut(s)	304, 642
StuI	AGGCCT	1 cut(s)	1451
StyD4I	CCNGG	4 cut(s)	195, 533, 673, 1068
StyI	CCWWGG	2 cut(s)	927, 1600
TaaI	ACNGT	5 cut(s)	716, 787, 860, 1132, 1966
TaiI	ACGT	5 cut(s)	106, 550, 1003, 1020, 1801
TaqI	TCGA	2 cut(s)	889, 1389
TaqII	GACCGA	1 cut(s)	784
TatI	WGTACW	5 cut(s)	460, 648, 855, 1110, 1792
TauI	GCSGC	1 cut(s)	902
TfiI	GAWTC	7 cut(s)	87, 239, 386, 467, 542, 1517, 2105
Tru1I	TTAA	9 cut(s)	159, 437, 444, 663, 960, 1458, 1673, 2133, 2277
Tru9I	TTAA	9 cut(s)	159, 437, 444, 663, 960, 1458, 1673, 2133, 2277
TscAI	CASTG	2 cut(s)	1816, 2224
TseFI	GTSAC	3 cut(s)	1055, 1376, 2240
Tsp45I	GTSAC	3 cut(s)	1055, 1376, 2240
TspGWI	ACGGA	2 cut(s)	1150, 2401
TspRI	CASTG	2 cut(s)	1816, 2224
Van91I	CCANNNNNTGG	1 cut(s)	2033
Vha464I	CTTAAG	2 cut(s)	443, 1457
VpaK11BI	GGWCC	1 cut(s)	1354
XapI	RAATTY	6 cut(s)	112, 167, 945, 1840, 2261, 2300
XceI	RCATGY	1 cut(s)	1883
XmaJI	CCTAGG	1 cut(s)	1600
XmiI	GTMKAC	4 cut(s)	510, 923, 2098, 2383
ZrmI	AGTACT	2 cut(s)	650, 857
Zsp2I	ATGCAT	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.