Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006252

Physical Location & Seq

Genomic Coordinates Forward (+)

17648440 .. 17657882

Gene Structure 9443 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028010

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGAAGGAGAGTAGAGATGGAATCAAGAGCGACAGACGTGCAAAAAATTCATCAGTTAGCTCACTTCCACTCATCTTGGACATAGACGACTTTAAGGGTGAATTTTCATTTGACGCATTGTTTGGAAACCTGGTAAATGATCTCCTCCCATCCTTTCAAGAAGATGAAACAGATTCATCTGAGGGTCATAGCAACATCAGCGGGACTGATTCTTTGCCAAATGGACATATGCGAGCCCCGTCAGATGCAACAAGATTTGCGCAGGGACTGTCTGACCCTTTATTTCCAGAAGTAGATAAGATCTTATCTCTGTTCAAGGATTCTTGTAAAGAGTTGGTTGATCTCCAGACACAGATTGATGGAAAGCTATTAAATCTTAAGAAGGATGTTTCTGTACAAGATTCTAAGCACCGCAAGACACTTACTGAGCTTGAAAAAGGAGTAGACGGCTTGTTTGGTAGCTTTGCCAGGTTGGATTCACGTATATCAAGTGTTGGACAGACTGCTGCAAAAATAGGAGATCATCTGCAGAGTGCAGATGCTCAGCGGGAAACTGCTAGTCAATCAATAGAGCTCATAAAGTACTTGATGGAGTTTAATAGCAGCCCAGGCGATCTAATGGAACTTTCACCTCTATTTTCCGACGACAGTCGTGTTGCAGAGGCTGCTAAAATTGCACAAAAACTGCGGGCATTTGCTGAGGAAGATATTGGAAGAACTGTACCATCGGTCATGGGCAATGCAGCCGCTAGCAGAGGATTAGAAGTTGCAGTTGCTAATCTTCAGGAGTACTGTAATGAATTGGAGAACAGACTGCTAGCCCGATTTGATGCCGCATCACAGAGAAGAGATTTGTCTACCATGGCAGAATGTGCTAAAATTTTATCTCAGTTTAACAGGGGAACTAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGACGTGGAAGTCATGAATGCAGATACCAGATTGGTTCTTGGTGACGAGGGTTCCCAGGCTAGTCCTAGCAATGTTTCTCGTGGACTTTCTTCCTTGTACAAAGAAATCACAGATACTGTACGGAAGGAAGCAGCAACAATTATGGCTGTTTTCCCTTCTCCTAATGAAGTTATGTCAATCTTAGTTCAGCGAGTTTTAGAGCAGAGAATTACAGCTTTATTGGACAAATTATTGGTAAAACCATCTCTCGTGAACCTACCTCCTATGGAAGAAGGGGGCCTTCTATTATATCTTAGAATGCTAGCGGTGGCATATGAGAAGACGCAAGATCTTGCTAAGGACCTGCGAGCCGTGGGATGTGGTGACTTGGATGTCGAGGGCCTCACTGAGTCTTTGTTTTCTGCTCACAAGGATGGATATCCTGAACATGAGCAGGCCTCTCTTAAACAACTATATCAAGCTAAGATGGCAGAACTACGTGCTGAAAGCCAGCAGACATCTGAATCAAGTGGAACAATCGGGCGCTCAAAAGGAGCAGCAGTAGCATCTTCCAACCAGCAAATATCTGTCACTGTTGTGACAGAGTTTGTTCGTTGGAATGAAGAAGCAATTACCAGATGCACTCTGTTCTCATCCCAACCTGCAACCCTTGCAGCAAATGTAAAATCGGTGTTCACTTCCCTCCTAGGCCAAGTCAGTAATTATATAACAGAAGGTCTTGAACGAGCAAGAGACAGCTTGACTGAAGCTGCATCTTTAAGGGAAAGATTTGTATTGGGTACTAGTATGAGTAGAAGGGTGGCTGCTGCAGCTGCTTCTGCTGCAGAAGCTGCTGCTGCTGCTGGTGAAAGCAGTTTCAGATCTTTCATGGTTGCTGTACAACGTTGTGGTAGCAGTGTGGCTATAGTTCAGCAATATTTTTCAAATTCTATCTCTCGGCTTCTACTCCCTGTTGATGGAGCGCATGCTGCTTCATGTGAAGAAATGGCAACAGCTATGTCAAGTGCGGAGGGTGCTGCATATAAAGGGCTTCAACAATGTATTGAAACTGTGATGGCTGAGGTGGAGCGGTTACTTTCTTCTGAACAGAAGGCAACAGATTACAGATCACCAGAAGATGGATTTGCTCCTGATCATCGGCCGACAAATGCCTGCACGAGAGTTGTAGCTTATCTTTCCCGTATACTAGAATCTGCATTCTCAGCACTTGAGGGTCTTAACAAGCAAGCATTTTTGACTGAATTAGGAAATCGCTTGCATAAAGGGCTACTAACACATTGGCAGAAGTTCACTTTCAATCCCAGTGGAGGATTACGGCTGAAGCGTGACATAACTGAATATGGAGAATTTGTGCGCAGTTTTAATGCTCCTTCTGTTGATGAAAAATTTGAATTGCTTGGCATAATGGCCAATGTCTTTATTGTTGCTCCTGAAAGTCTCTCAACTCTGTTTGAGGGTACCCCCAGTATACGGAAAGATGCACAGAGGTTTATTGAGCTTAGAGATGACTACAAGAGTGCAAAACTTGCTTCCAGACTTAGTTCCTTGTGGGCAAGCTCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005938 GO:0006810 GO:0006887 GO:0006892 GO:0006893 GO:0008150 GO:0009987 GO:0016192 GO:0031982 GO:0032940 GO:0032991 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048193 GO:0051179 GO:0051234 GO:0070062 GO:0071944 GO:0098876 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec10

Protein Analysis

838

Amino Acids

91.31

Weight (kDa)

5.25

Isoelectric Point (pI)

49.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec10_N	PF20667	99 - 215	5.7e-31	Exocyst complex component Sec10, N-terminal
Sec10_HB	PF07393	221 - 827	8e-153	Exocyst complex component Sec10-like, alpha-helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12370 AT5G12370 AT5G12370
fragaria_vesca	FvH4_7g15330 FvH4_7g15330 FvH4_7g15330 FvH4_7g15330
malus_domestica	MD01G1071200.v1.1 MD07G1131500.v1.1
prunus_persica	Prupe.2G177200_v2.0.a1
pyrus_communis	pycom01g10010 pycom07g12840
rosa_chinensis	RchiOBHm_Chr1g0357661 RchiOBHm_Chr1g0375651 RchiOBHm_Chr1g0375661
rosa_laevigata	RLG00000028010
rosa_multiflora	Rmu_sc0001644.1_g000021 Rmu_sc0004683.1_g000003
rosa_roxburghii	Rroxscaffold_4G00282690 Rroxscaffold_4G00298660
rosa_rugosa	Rorug01G0257500
rosa_samantha	Rh1AG271500 Rh1AG402900 Rh1BG238400 Rh1CG255300 Rh1DG266700
rosa_wichuraiana	Rw1G024200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	956, 1319
Acc16I	TGCGCA	2 cut(s)	261, 2303
Acc36I	ACCTGC	2 cut(s)	1299, 1597
Acc65I	GGTACC	1 cut(s)	2405
AccB1I	GGYRCC	1 cut(s)	2405
AccB7I	CCANNNNNTGG	1 cut(s)	2066
AccBSI	CCGCTC	1 cut(s)	2017
AccI	GTMKAC	4 cut(s)	444, 857, 2131, 2416
AciI	CCGC	9 cut(s)	201, 412, 547, 688, 747, 834, 1253, 1955, 2017
AclI	AACGTT	1 cut(s)	1831
AcoI	YGGCCR	2 cut(s)	2087, 2355
AcsI	RAATTY	6 cut(s)	46, 101, 879, 1873, 2294, 2333
AcuI	CTGAAG	3 cut(s)	767, 1713, 2288
AfaI	GTAC	9 cut(s)	396, 584, 723, 791, 1046, 1068, 1729, 1827, 2407
AfiI	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
AflII	CTTAAG	1 cut(s)	377
AflIII	ACRYGT	1 cut(s)	932
AgsI	TTSAA	9 cut(s)	158, 316, 434, 1670, 1872, 1982, 1994, 2245, 2339
AhlI	ACTAGT	2 cut(s)	905, 1730
AjiI	CACGTC	3 cut(s)	38, 935, 952
AjnI	CCWGG	4 cut(s)	129, 467, 607, 1002
AleI	CACNNNNGTG	1 cut(s)	1523
Alw21I	GWGCWC	1 cut(s)	576
Alw26I	GTCTC	2 cut(s)	1674, 2390
AlwNI	CAGNNNCTG	4 cut(s)	268, 665, 1064, 1778
AoxI	GGCC	6 cut(s)	1225, 1327, 1383, 1636, 2087, 2355
ApoI	RAATTY	6 cut(s)	46, 101, 879, 1873, 2294, 2333
ArsI	GACNNNNNNTTYG	6 cut(s)	104, 136, 196, 228, 437, 469
Asp718I	GGTACC	1 cut(s)	2405
AspA2I	CCTAGG	1 cut(s)	1633
AspLEI	GCGC	4 cut(s)	262, 1473, 1912, 2304
AspS9I	GGNCC	3 cut(s)	1225, 1288, 1327
AsuHPI	GGTGA	6 cut(s)	110, 621, 1001, 1322, 1805, 2049
AsuNHI	GCTAGC	3 cut(s)	749, 817, 1249
AvaII	GGWCC	1 cut(s)	1288
AvrII	CCTAGG	1 cut(s)	1633
BalI	TGGCCA	1 cut(s)	2357
BanI	GGYRCC	1 cut(s)	2405
BanII	GRGCYC	2 cut(s)	238, 576
BauI	CACGAG	3 cut(s)	1026, 1196, 2104
BbsI	GAAGAC	1 cut(s)	1274
Bbv12I	GWGCWC	1 cut(s)	576
BbvCI	CCTCAGC	2 cut(s)	699, 2007
BceAI	ACGGC	3 cut(s)	463, 1283, 2279
BcgI	CGANNNNNNTGC	2 cut(s)	20, 54
BciT130I	CCWGG	4 cut(s)	131, 469, 609, 1004
BclI	TGATCA	1 cut(s)	2080
BcoDI	GTCTC	2 cut(s)	1674, 2390
BcuI	ACTAGT	2 cut(s)	905, 1730
BfmI	CTRYAG	4 cut(s)	527, 1755, 1770, 1851
BfoI	RGCGCY	1 cut(s)	1474
BfrI	CTTAAG	1 cut(s)	377
BfuAI	ACCTGC	2 cut(s)	1299, 1597
BglII	AGATCT	3 cut(s)	300, 1276, 1808
BlnI	CCTAGG	1 cut(s)	1633
BlpI	GCTNAGC	1 cut(s)	543
BmcAI	AGTACT	2 cut(s)	584, 791
Bme1390I	CCNGG	4 cut(s)	131, 469, 609, 1004
Bme18I	GGWCC	1 cut(s)	1288
BmgBI	CACGTC	3 cut(s)	38, 935, 952
BmgT120I	GGNCC	3 cut(s)	1225, 1288, 1327
BmiI	GGNNCC	3 cut(s)	1000, 1226, 2407
BmrFI	CCNGG	4 cut(s)	131, 469, 609, 1004
BmrI	ACTGGG	2 cut(s)	2244, 2406
BmsI	GCATC	8 cut(s)	235, 529, 820, 845, 1502, 1556, 1709, 2416
BmtI	GCTAGC	3 cut(s)	753, 821, 1253
BmuI	ACTGGG	2 cut(s)	2244, 2406
BoxI	GACNNNNGTC	1 cut(s)	648
BpiI	GAAGAC	1 cut(s)	1274
BplI	GAGNNNNNCTC	2 cut(s)	1370, 1402
BpmI	CTGGAG	1 cut(s)	329
Bpu10I	CCTNAGC	4 cut(s)	699, 1284, 2007, 2506
Bpu1102I	GCTNAGC	1 cut(s)	543
BpuEI	CTTGAG	1 cut(s)	2177
BsaAI	YACGTR	2 cut(s)	482, 1427
BsaBI	GATNNNNATC	1 cut(s)	1365
BsaJI	CCNNGG	5 cut(s)	607, 861, 1002, 1299, 1633
BsaXI	ACNNNNNCTCC	4 cut(s)	1473, 1503, 2283, 2313
Bsc4I	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
Bse1I	ACTGG	2 cut(s)	2250, 2412
Bse3DI	GCAATG	2 cut(s)	745, 1024
Bse8I	GATNNNNATC	1 cut(s)	1365
BseBI	CCWGG	4 cut(s)	131, 469, 609, 1004
BseDI	CCNNGG	5 cut(s)	607, 861, 1002, 1299, 1633
BseGI	GGATG	6 cut(s)	149, 391, 1310, 1324, 1366, 1580
BseJI	GATNNNNATC	1 cut(s)	1365
BseLI	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
BseMI	GCAATG	2 cut(s)	745, 1024
BseMII	CTCAG	8 cut(s)	171, 417, 557, 690, 902, 1326, 1998, 2163
BseNI	ACTGG	2 cut(s)	2250, 2412
BseRI	GAGGAG	1 cut(s)	134
BseX3I	CGGCCG	1 cut(s)	2087
BsgI	GTGCAG	2 cut(s)	555, 2086
Bsh1285I	CGRYCG	1 cut(s)	2090
BshFI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
BshNI	GGYRCC	1 cut(s)	2405
BsiEI	CGRYCG	1 cut(s)	2090
BsiHKAI	GWGCWC	1 cut(s)	576
BslFI	GGGAC	2 cut(s)	217, 279
BslI	CCNNNNNNNGG	4 cut(s)	1904, 2066, 2255, 2418
BsmAI	GTCTC	2 cut(s)	1674, 2390
BsmFI	GGGAC	2 cut(s)	217, 279
BsmI	GAATGC	3 cut(s)	970, 1251, 2144
BsnI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
Bsp1286I	GDGCHC	2 cut(s)	238, 576
Bsp1407I	TGTACA	3 cut(s)	394, 1044, 1825
Bsp143I	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
Bsp1720I	GCTNAGC	1 cut(s)	543
Bsp19I	CCATGG	1 cut(s)	861
BspACI	CCGC	9 cut(s)	201, 412, 547, 688, 747, 834, 1253, 1955, 2017
BspANI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
BspCNI	CTCAG	8 cut(s)	172, 418, 556, 691, 901, 1327, 1999, 2162
BspHI	TCATGA	1 cut(s)	960
BspLI	GGNNCC	3 cut(s)	1000, 1226, 2407
BspMAI	CTGCAG	3 cut(s)	531, 1759, 1774
BspMI	ACCTGC	2 cut(s)	1299, 1597
BspOI	GCTAGC	3 cut(s)	753, 821, 1253
BspT107I	GGYRCC	1 cut(s)	2405
BspTI	CTTAAG	1 cut(s)	377
BsrBI	CCGCTC	1 cut(s)	2017
BsrDI	GCAATG	2 cut(s)	745, 1024
BsrGI	TGTACA	3 cut(s)	394, 1044, 1825
BsrI	ACTGG	2 cut(s)	2250, 2412
BssECI	CCNNGG	5 cut(s)	607, 861, 1002, 1299, 1633
BssMI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
BssNAI	GTATAC	2 cut(s)	2132, 2417
BssSI	CACGAG	3 cut(s)	1026, 1196, 2104
BssT1I	CCWWGG	2 cut(s)	861, 1633
Bst1107I	GTATAC	2 cut(s)	2132, 2417
Bst2BI	CACGAG	3 cut(s)	1026, 1196, 2104
Bst2UI	CCWGG	4 cut(s)	131, 469, 609, 1004
Bst4CI	ACNGT	7 cut(s)	270, 650, 721, 794, 1066, 1522, 1999
Bst6I	CTCTTC	1 cut(s)	841
BstAFI	CTTAAG	1 cut(s)	377
BstAPI	GCANNNNNTGC	5 cut(s)	665, 872, 1598, 1778, 2474
BstAUI	TGTACA	3 cut(s)	394, 1044, 1825
BstBAI	YACGTR	2 cut(s)	482, 1427
BstDSI	CCRYGG	2 cut(s)	861, 1299
BstF5I	GGATG	6 cut(s)	149, 391, 1310, 1324, 1366, 1580
BstH2I	RGCGCY	1 cut(s)	1474
BstHHI	GCGC	4 cut(s)	262, 1473, 1912, 2304
BstKTI	GATC	9 cut(s)	142, 303, 343, 523, 616, 1279, 1811, 2057, 2083
BstMAI	GTCTC	2 cut(s)	1674, 2390
BstMBI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
BstMCI	CGRYCG	1 cut(s)	2090
BstNI	CCWGG	4 cut(s)	131, 469, 609, 1004
BstNSI	RCATGY	1 cut(s)	1916
BstPAI	GACNNNNGTC	1 cut(s)	648
BstSCI	CCNGG	4 cut(s)	129, 467, 607, 1002
BstSFI	CTRYAG	4 cut(s)	527, 1755, 1770, 1851
BstV2I	GAAGAC	1 cut(s)	1274
BstX2I	RGATCY	3 cut(s)	300, 1276, 1808
BstYI	RGATCY	3 cut(s)	300, 1276, 1808
BstZ17I	GTATAC	2 cut(s)	2132, 2417
BstZI	CGGCCG	1 cut(s)	2087
BsuRI	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
BtgI	CCRYGG	2 cut(s)	861, 1299
BtrI	CACGTC	3 cut(s)	38, 935, 952
BtsCI	GGATG	6 cut(s)	149, 391, 1310, 1324, 1366, 1580
BtsI	GCAGTG	1 cut(s)	1849
BtsIMutI	CAGTG	4 cut(s)	1332, 1518, 1849, 2257
BveI	ACCTGC	2 cut(s)	1299, 1597
CaiI	CAGNNNCTG	4 cut(s)	268, 665, 1064, 1778
CciI	TCATGA	1 cut(s)	960
CfoI	GCGC	4 cut(s)	262, 1473, 1912, 2304
Cfr13I	GGNCC	3 cut(s)	1225, 1288, 1327
CseI	GACGC	2 cut(s)	122, 1279
CsiI	ACCWGGT	1 cut(s)	129
Csp6I	GTAC	9 cut(s)	395, 583, 722, 790, 1045, 1067, 1728, 1826, 2406
CspCI	CAANNNNNGTGG	4 cut(s)	57, 92, 2233, 2268
CviAII	CATG	8 cut(s)	733, 862, 913, 961, 1376, 1816, 1913, 1923
CviQI	GTAC	9 cut(s)	395, 583, 722, 790, 1045, 1067, 1728, 1826, 2406
DpnI	GATC	9 cut(s)	141, 302, 342, 522, 615, 1278, 1810, 2056, 2082
DpnII	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
DrdI	GACNNNNNNGTC	2 cut(s)	956, 1319
DseDI	GACNNNNNNGTC	2 cut(s)	956, 1319
EaeI	YGGCCR	2 cut(s)	2087, 2355
EagI	CGGCCG	1 cut(s)	2087
Eam1104I	CTCTTC	1 cut(s)	841
EarI	CTCTTC	1 cut(s)	841
Ecl136II	GAGCTC	1 cut(s)	574
EclXI	CGGCCG	1 cut(s)	2087
Eco130I	CCWWGG	2 cut(s)	861, 1633
Eco147I	AGGCCT	1 cut(s)	1385
Eco24I	GRGCYC	2 cut(s)	238, 576
Eco32I	GATATC	1 cut(s)	1367
Eco47I	GGWCC	1 cut(s)	1288
Eco52I	CGGCCG	1 cut(s)	2087
Eco53kI	GAGCTC	1 cut(s)	574
Eco57I	CTGAAG	3 cut(s)	767, 1713, 2288
EcoICRI	GAGCTC	1 cut(s)	574
EcoO109I	RGGNCCY	3 cut(s)	1225, 1288, 1327
EcoRII	CCWGG	4 cut(s)	129, 467, 607, 1002
EcoRV	GATATC	1 cut(s)	1367
EcoT14I	CCWWGG	2 cut(s)	861, 1633
EcoT38I	GRGCYC	2 cut(s)	238, 576
ErhI	CCWWGG	2 cut(s)	861, 1633
FaeI	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
FalI	AAGNNNNNCTT	2 cut(s)	1212, 1244
FaqI	GGGAC	2 cut(s)	217, 279
FatI	CATG	8 cut(s)	732, 861, 912, 960, 1375, 1815, 1912, 1922
FauI	CCCGC	3 cut(s)	194, 540, 681
FauNDI	CATATG	2 cut(s)	228, 1261
FbaI	TGATCA	1 cut(s)	2080
FblI	GTMKAC	4 cut(s)	444, 857, 2131, 2416
FokI	GGATG	6 cut(s)	136, 398, 1317, 1331, 1373, 1567
FriOI	GRGCYC	2 cut(s)	238, 576
FspI	TGCGCA	2 cut(s)	261, 2303
GlaI	GCGC	4 cut(s)	261, 1472, 1911, 2303
GsuI	CTGGAG	1 cut(s)	329
HaeII	RGCGCY	1 cut(s)	1474
HaeIII	GGCC	6 cut(s)	1227, 1329, 1385, 1638, 2089, 2357
HgaI	GACGC	2 cut(s)	122, 1279
HhaI	GCGC	4 cut(s)	262, 1473, 1912, 2304
Hin1II	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
Hin6I	GCGC	4 cut(s)	260, 1471, 1910, 2302
HinP1I	GCGC	4 cut(s)	260, 1471, 1910, 2302
HinfI	GANTC	9 cut(s)	21, 173, 209, 320, 401, 476, 1337, 1451, 2138
HphI	GGTGA	6 cut(s)	110, 621, 1001, 1322, 1805, 2049
Hpy166II	GTNNAC	8 cut(s)	445, 858, 1031, 1201, 1623, 2132, 2238, 2417
Hpy188I	TCNGA	7 cut(s)	181, 244, 274, 643, 1450, 1808, 2032
Hpy8I	GTNNAC	8 cut(s)	445, 858, 1031, 1201, 1623, 2132, 2238, 2417
Hpy99I	CGWCG	1 cut(s)	647
HpyAV	CCTTC	9 cut(s)	376, 1066, 1113, 1214, 1238, 1655, 1737, 2032, 2328
HpyCH4III	ACNGT	7 cut(s)	270, 650, 721, 794, 1066, 1522, 1999
HpyCH4IV	ACGT	6 cut(s)	37, 481, 934, 951, 1426, 1831
HpySE526I	ACGT	6 cut(s)	37, 481, 934, 951, 1426, 1831
Hsp92II	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
HspAI	GCGC	4 cut(s)	260, 1471, 1910, 2302
KpnI	GGTACC	1 cut(s)	2409
Ksp22I	TGATCA	1 cut(s)	2080
Kzo9I	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
LmnI	GCTCC	6 cut(s)	1481, 1907, 2014, 2080, 2320, 2380
LweI	GCATC	8 cut(s)	235, 529, 820, 845, 1502, 1556, 1709, 2416
MabI	ACCWGGT	1 cut(s)	129
MaeII	ACGT	6 cut(s)	37, 481, 934, 951, 1426, 1831
MaeIII	GTNAC	6 cut(s)	989, 1310, 1516, 1525, 2019, 2273
MalI	GATC	9 cut(s)	141, 302, 342, 522, 615, 1278, 1810, 2056, 2082
MbiI	CCGCTC	1 cut(s)	2017
MboI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
MflI	RGATCY	3 cut(s)	300, 1276, 1808
MhlI	GDGCHC	2 cut(s)	238, 576
MlsI	TGGCCA	1 cut(s)	2357
MluNI	TGGCCA	1 cut(s)	2357
MlyI	GAGTC	1 cut(s)	1346
MmeI	TCCRAC	5 cut(s)	453, 475, 666, 1523, 1524
Mox20I	TGGCCA	1 cut(s)	2357
MscI	TGGCCA	1 cut(s)	2357
MseI	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
MslI	CAYNNNNRTG	2 cut(s)	1359, 1523
Msp20I	TGGCCA	1 cut(s)	2357
MspA1I	CMGCKG	3 cut(s)	201, 547, 1760
MspCI	CTTAAG	1 cut(s)	377
MspR9I	CCNGG	4 cut(s)	131, 469, 609, 1004
Mva1269I	GAATGC	3 cut(s)	970, 1251, 2144
MvaI	CCWGG	4 cut(s)	131, 469, 609, 1004
NcoI	CCATGG	1 cut(s)	861
NdeI	CATATG	2 cut(s)	228, 1261
NdeII	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
NheI	GCTAGC	3 cut(s)	749, 817, 1249
NlaIII	CATG	8 cut(s)	736, 865, 916, 964, 1379, 1819, 1916, 1926
NlaIV	GGNNCC	3 cut(s)	1000, 1226, 2407
NmeAIII	GCCGAG	1 cut(s)	1864
NmuCI	GTSAC	5 cut(s)	989, 1310, 1516, 1525, 2273
NsbI	TGCGCA	2 cut(s)	261, 2303
NspI	RCATGY	1 cut(s)	1916
OliI	CACNNNNGTG	1 cut(s)	1523
PaeI	GCATGC	1 cut(s)	1916
PagI	TCATGA	1 cut(s)	960
PceI	AGGCCT	1 cut(s)	1385
PcsI	WCGNNNNNNNCGW	1 cut(s)	2269
PctI	GAATGC	3 cut(s)	970, 1251, 2144
PfeI	GAWTC	8 cut(s)	21, 173, 209, 320, 401, 476, 1451, 2138
PflMI	CCANNNNNTGG	1 cut(s)	2066
PleI	GAGTC	1 cut(s)	1345
PpsI	GAGTC	1 cut(s)	1345
Ppu21I	YACGTR	2 cut(s)	482, 1427
PpuMI	RGGWCCY	1 cut(s)	1288
PshAI	GACNNNNGTC	1 cut(s)	648
Psp124BI	GAGCTC	1 cut(s)	576
Psp1406I	AACGTT	1 cut(s)	1831
Psp5II	RGGWCCY	1 cut(s)	1288
Psp6I	CCWGG	4 cut(s)	129, 467, 607, 1002
PspGI	CCWGG	4 cut(s)	129, 467, 607, 1002
PspN4I	GGNNCC	3 cut(s)	1000, 1226, 2407
PspPI	GGNCC	3 cut(s)	1225, 1288, 1327
PspPPI	RGGWCCY	1 cut(s)	1288
PstI	CTGCAG	3 cut(s)	531, 1759, 1774
PstNI	CAGNNNCTG	4 cut(s)	268, 665, 1064, 1778
PsuI	RGATCY	3 cut(s)	300, 1276, 1808
PvuII	CAGCTG	1 cut(s)	1760
RsaI	GTAC	9 cut(s)	396, 584, 723, 791, 1046, 1068, 1729, 1827, 2407
RsaNI	GTAC	9 cut(s)	395, 583, 722, 790, 1045, 1067, 1728, 1826, 2406
RseI	CAYNNNNRTG	2 cut(s)	1359, 1523
SacI	GAGCTC	1 cut(s)	576
SaqAI	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
Sau3AI	GATC	9 cut(s)	139, 300, 340, 520, 613, 1276, 1808, 2054, 2080
Sau96I	GGNCC	3 cut(s)	1225, 1288, 1327
ScaI	AGTACT	2 cut(s)	584, 791
SchI	GAGTC	1 cut(s)	1346
ScrFI	CCNGG	4 cut(s)	131, 469, 609, 1004
SduI	GDGCHC	2 cut(s)	238, 576
SexAI	ACCWGGT	1 cut(s)	129
SfaNI	GCATC	8 cut(s)	235, 529, 820, 845, 1502, 1556, 1709, 2416
SfcI	CTRYAG	4 cut(s)	527, 1755, 1770, 1851
SinI	GGWCC	1 cut(s)	1288
SmiMI	CAYNNNNRTG	2 cut(s)	1359, 1523
SmlI	CTYRAG	2 cut(s)	377, 2156
SmoI	CTYRAG	2 cut(s)	377, 2156
SpeI	ACTAGT	2 cut(s)	905, 1730
SphI	GCATGC	1 cut(s)	1916
SseBI	AGGCCT	1 cut(s)	1385
SsiI	CCGC	9 cut(s)	201, 412, 547, 688, 747, 834, 1253, 1955, 2017
SspI	AATATT	1 cut(s)	1865
SstI	GAGCTC	1 cut(s)	576
StuI	AGGCCT	1 cut(s)	1385
StyD4I	CCNGG	4 cut(s)	129, 467, 607, 1002
StyI	CCWWGG	2 cut(s)	861, 1633
TaaI	ACNGT	7 cut(s)	270, 650, 721, 794, 1066, 1522, 1999
TaiI	ACGT	6 cut(s)	40, 484, 937, 954, 1429, 1834
TaqI	TCGA	1 cut(s)	1323
TaqII	GACCGA	1 cut(s)	718
TatI	WGTACW	5 cut(s)	394, 582, 789, 1044, 1825
TauI	GCSGC	2 cut(s)	749, 836
TfiI	GAWTC	8 cut(s)	21, 173, 209, 320, 401, 476, 1451, 2138
Tru1I	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
Tru9I	TTAA	9 cut(s)	93, 371, 378, 597, 894, 1392, 1706, 2166, 2310
TscAI	CASTG	4 cut(s)	1339, 1525, 1849, 2257
TseFI	GTSAC	5 cut(s)	989, 1310, 1516, 1525, 2273
Tsp45I	GTSAC	5 cut(s)	989, 1310, 1516, 1525, 2273
TspGWI	ACGGA	2 cut(s)	1084, 2434
TspRI	CASTG	4 cut(s)	1339, 1525, 1849, 2257
Van91I	CCANNNNNTGG	1 cut(s)	2066
Vha464I	CTTAAG	1 cut(s)	377
VpaK11BI	GGWCC	1 cut(s)	1288
XapI	RAATTY	6 cut(s)	46, 101, 879, 1873, 2294, 2333
XceI	RCATGY	1 cut(s)	1916
XmaJI	CCTAGG	1 cut(s)	1633
XmiI	GTMKAC	4 cut(s)	444, 857, 2131, 2416
ZrmI	AGTACT	2 cut(s)	584, 791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.