Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010500

Physical Location & Seq

Genomic Coordinates Forward (+)

5311141 .. 5315834

Gene Structure 4694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G16260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGTCAGACTCTGATAATCTACAGCTTCCACCATCATCGACAGGGGCAACAGTTGCAGCTACTGATGTTGGTTGGTACATTCTTGGTGAAAATCAGCAGAACCTGGGCCCTTATACTTTCTCTGAGCTATGTAACCATTTCAGGAATGGTTACCTACTAGAAACTACTCTAGTCTGGGCTGACGGAAGAAGCGAATGGCAGCCACTTTCTGCCATCCCCGATTTAATGTCAAGGATATCCGGAGCTGAGATTGCCTATCCAGCTGTAGGTTCATCTGGGTTGATAAATGGATCTAATGCTGGAACCAGGCAAGAGAAGCAAGATTATACTGCCTCTGCTAGTACTGAGGATGAATTTGAGAAATGGCAGAGAGAGATTAAAGACGCAGAAGCAGAGGCTGAAAGGTTGAAAAATGGTTCTGTCTCTGGTACTGAGCTTGTTGAAGATGATCATGAAAGGGCATCTTCACCACCTGAGGGCGAAGATGAGTTCACAGATGATGATGGAACAAAATATAAATGGGACAGAGCTCGTAGAGTATGGGTTCCTCAGGACGATCCACCACTGGGTAGCGTTGACCCGTATGGACTCGAAGAGATGACCTTTGCTAAGGAAGACGAAGTATTTCCAACAATTAACATTCTTGATACTTCTGTTGATAAGAAGGATGCCTCTAAGGATGACGTGGCTGGTAAGAAAGAAGAAGATGGCTCTGATGAAACCGCTGAAATAAACAGTAACGGCAAGAGAAAGCTACCAGAGCCAGAAACTGAAAAGAAGGAACCAAACAAGCCTCCAGATTCGTGGTTTGAGTTAAAAGTAAACCCACATATTTATGTTAATGGGTTGCCCGATGATGTCACCATCGAGGAAGTAGCTGAAGTTTTTTCTAAGTGCGGTATAATTAAGGAGGATGACACTGGCAAGCCTCGCATAAAGCTATACAGTGACAAGGCGACAGGAAAATTAAAAGGCGATGCTCTTATCTCCTATATGAAGGAGCCCTCAGTGGATCTGGCAATTAAAATCTTAGACGGGGCTCCGTTACGTCCTGCTGATAAGCTCCTCATGTCAGTTTCTCGAGCTAAGTTCGAGCAGAAAGGGGAGAGATTTATAACTAAGCAAACCGACAACAAGAAGAAAAAGAAGCTTAAAAAGGTCGAGCAAAAGTTGCTTGGATGGGGTGGTACAGATGATTCTAAGGTCTCAATACCTGCAACGGTTGTTCTGCGCTACATGTTCAGTCCAGCTGAGTTGATGGCTGATGAGGATCTGGTTGCTGAGTTAGAGGAAGACGTGAAAGAGGAGAGTTTGAAGCATGGACCGTTCGACTCAGTGAAGGTATGTGAGCATCATCCACAGGGTGTTGTTCTTGTAAGATTCAAGGATCGGAGAGATGCACAGAAATGTATAGAAGCAATGAACGGTCGATGGTATGCAAAGAGACAGATACATGCGAGCCTCGATGATGGATCAGTGAACCATGCTACAGTTAGGGATTTTGATTTGGAAGCGGAACGGTTAGATCAGTTTGCAGCTGAACTGGAAGCTGCTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4339 RRM_1

Protein Analysis

519

Amino Acids

57.89

Weight (kDa)

4.74

Isoelectric Point (pI)

42.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_2	PF14237	25 - 75	6e-15	GYF domain 2
RRM_1	PF00076	278 - 347	1.4e-06	RNA recognition motif
RRM_1	PF00076	430 - 485	1.3e-07	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16260
fragaria_vesca	FvH4_6g00060
malus_domestica	MD00G1017100.v1.1 MD12G1261400.v1.1
prunus_persica	Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1
pyrus_communis	pycom02g06260 pycom04g22010 pycom04g22020 pycom12g24240
rosa_chinensis	RchiOBHm_Chr3g0447391
rosa_laevigata	RLG00000026003
rosa_multiflora	Rmu_ssc0000473.1_g000016
rosa_roxburghii	Rroxscaffold_6G00425590
rosa_rugosa	Rorug02G0601100
rosa_samantha	Rh3AG001200 Rh3BG000900 Rh3CG000900 Rh3DG001100
rosa_wichuraiana	Rw3G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1115
Acc36I	ACCTGC	1 cut(s)	1222
AccIII	TCCGGA	1 cut(s)	239
AciI	CCGC	3 cut(s)	723, 897, 1514
AclWI	GGATC	6 cut(s)	298, 551, 1020, 1278, 1395, 1480
AcsI	RAATTY	1 cut(s)	353
AcuI	CTGAAG	1 cut(s)	900
AdeI	CACNNNGTG	1 cut(s)	1364
AfaI	GTAC	4 cut(s)	77, 343, 430, 1189
AfiI	CCNNNNNNNGG	3 cut(s)	266, 476, 566
AflIII	ACRYGT	1 cut(s)	1236
AgsI	TTSAA	4 cut(s)	409, 443, 1315, 1384
AjiI	CACGTC	2 cut(s)	685, 1297
AjnI	CCWGG	2 cut(s)	102, 305
Alw21I	GWGCWC	1 cut(s)	532
Alw26I	GTCTC	3 cut(s)	427, 1210, 1438
AlwI	GGATC	6 cut(s)	298, 551, 1020, 1278, 1395, 1480
AlwNI	CAGNNNCTG	5 cut(s)	11, 62, 103, 398, 770
Ama87I	CYCGRG	1 cut(s)	1080
Aor13HI	TCCGGA	1 cut(s)	239
AoxI	GGCC	1 cut(s)	106
ApaI	GGGCCC	1 cut(s)	110
ApeKI	GCWGC	4 cut(s)	56, 199, 1535, 1550
ApoI	RAATTY	1 cut(s)	353
Asp700I	GAANNNNTTC	1 cut(s)	624
AspLEI	GCGC	1 cut(s)	1233
AspS9I	GGNCC	3 cut(s)	106, 107, 1322
AsuHPI	GGTGA	3 cut(s)	98, 459, 853
AvaI	CYCGRG	1 cut(s)	1080
AvaII	GGWCC	1 cut(s)	1322
AxyI	CCTNAGG	2 cut(s)	474, 549
BaeGI	GKGCMC	1 cut(s)	110
BaeI	ACNNNNGTAYC	2 cut(s)	639, 672
BanII	GRGCYC	4 cut(s)	110, 532, 1005, 1042
BbsI	GAAGAC	2 cut(s)	621, 1299
Bbv12I	GWGCWC	1 cut(s)	532
BbvI	GCAGC	4 cut(s)	68, 211, 1537, 1547
BccI	CCATC	9 cut(s)	40, 221, 497, 701, 872, 1173, 1252, 1425, 1463
BceAI	ACGGC	1 cut(s)	757
BciT130I	CCWGG	2 cut(s)	104, 307
BclI	TGATCA	1 cut(s)	448
BcoDI	GTCTC	3 cut(s)	427, 1210, 1438
BfaI	CTAG	3 cut(s)	158, 170, 339
BfmI	CTRYAG	3 cut(s)	20, 264, 1488
BfuAI	ACCTGC	1 cut(s)	1222
BisI	GCNGC	4 cut(s)	57, 200, 1536, 1551
BlsI	GCNGC	4 cut(s)	58, 201, 1537, 1552
BmcAI	AGTACT	1 cut(s)	343
Bme1390I	CCNGG	2 cut(s)	104, 307
Bme18I	GGWCC	1 cut(s)	1322
BmeT110I	CYCGRG	1 cut(s)	1080
BmgBI	CACGTC	2 cut(s)	685, 1297
BmgT120I	GGNCC	3 cut(s)	106, 107, 1322
BmiI	GGNNCC	6 cut(s)	108, 304, 546, 783, 1002, 1041
BmrFI	CCNGG	2 cut(s)	104, 307
BmrI	ACTGGG	1 cut(s)	575
BmsI	GCATC	5 cut(s)	470, 658, 967, 1360, 1387
BmuI	ACTGGG	1 cut(s)	575
BpiI	GAAGAC	2 cut(s)	621, 1299
BpmI	CTGGAG	1 cut(s)	780
Bpu10I	CCTNAGC	1 cut(s)	609
BsaBI	GATNNNNATC	1 cut(s)	1269
BsaI	GGTCTC	1 cut(s)	1210
BsaJI	CCNNGG	1 cut(s)	103
BsaWI	WCCGGW	1 cut(s)	239
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 476, 566
Bse1I	ACTGG	3 cut(s)	570, 925, 1548
Bse21I	CCTNAGG	2 cut(s)	474, 549
Bse3DI	GCAATG	1 cut(s)	1425
Bse8I	GATNNNNATC	1 cut(s)	1269
BseAI	TCCGGA	1 cut(s)	239
BseBI	CCWGG	2 cut(s)	104, 307
BseDI	CCNNGG	1 cut(s)	103
BseGI	GGATG	7 cut(s)	213, 355, 673, 685, 919, 1184, 1354
BseJI	GATNNNNATC	1 cut(s)	1269
BseLI	CCNNNNNNNGG	3 cut(s)	266, 476, 566
BseMI	GCAATG	1 cut(s)	1425
BseNI	ACTGG	3 cut(s)	570, 925, 1548
BseRI	GAGGAG	2 cut(s)	1055, 1319
BseSI	GKGCMC	1 cut(s)	110
BseXI	GCAGC	4 cut(s)	68, 211, 1537, 1547
Bsh1285I	CGRYCG	1 cut(s)	1429
BshFI	GGCC	1 cut(s)	108
BsiEI	CGRYCG	1 cut(s)	1429
BsiHKAI	GWGCWC	1 cut(s)	532
BsiHKCI	CYCGRG	1 cut(s)	1080
BsiSI	CCGG	1 cut(s)	240
BslFI	GGGAC	1 cut(s)	536
BslI	CCNNNNNNNGG	3 cut(s)	266, 476, 566
BsmAI	GTCTC	3 cut(s)	427, 1210, 1438
BsmFI	GGGAC	1 cut(s)	536
BsnI	GGCC	1 cut(s)	108
Bso31I	GGTCTC	1 cut(s)	1210
BsoBI	CYCGRG	1 cut(s)	1080
Bsp120I	GGGCCC	1 cut(s)	106
Bsp1286I	GDGCHC	4 cut(s)	110, 532, 1005, 1042
Bsp13I	TCCGGA	1 cut(s)	239
Bsp143I	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
BspACI	CCGC	3 cut(s)	723, 897, 1514
BspANI	GGCC	1 cut(s)	108
BspEI	TCCGGA	1 cut(s)	239
BspHI	TCATGA	1 cut(s)	451
BspLI	GGNNCC	6 cut(s)	108, 304, 546, 783, 1002, 1041
BspMI	ACCTGC	1 cut(s)	1222
BspPI	GGATC	6 cut(s)	298, 551, 1020, 1278, 1395, 1480
BspTNI	GGTCTC	1 cut(s)	1210
BsrDI	GCAATG	1 cut(s)	1425
BsrI	ACTGG	3 cut(s)	570, 925, 1548
BssECI	CCNNGG	1 cut(s)	103
BssMI	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
Bst2UI	CCWGG	2 cut(s)	104, 307
Bst4CI	ACNGT	8 cut(s)	52, 737, 947, 1222, 1326, 1427, 1492, 1521
Bst6I	CTCTTC	1 cut(s)	588
BstAPI	GCANNNNNTGC	2 cut(s)	53, 1171
BstC8I	GCNNGC	2 cut(s)	926, 1459
BstEII	GGTNACC	1 cut(s)	149
BstF5I	GGATG	7 cut(s)	213, 355, 673, 685, 919, 1184, 1354
BstHHI	GCGC	1 cut(s)	1233
BstKTI	GATC	8 cut(s)	293, 451, 559, 1015, 1273, 1390, 1475, 1528
BstMAI	GTCTC	3 cut(s)	427, 1210, 1438
BstMBI	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
BstMCI	CGRYCG	1 cut(s)	1429
BstMWI	GCNNNNNNNGC	7 cut(s)	53, 251, 260, 316, 760, 930, 1171
BstNI	CCWGG	2 cut(s)	104, 307
BstNSI	RCATGY	2 cut(s)	1240, 1457
BstPI	GGTNACC	1 cut(s)	149
BstSCI	CCNGG	2 cut(s)	102, 305
BstSFI	CTRYAG	3 cut(s)	20, 264, 1488
BstSLI	GKGCMC	1 cut(s)	110
BstV1I	GCAGC	4 cut(s)	68, 211, 1537, 1547
BstV2I	GAAGAC	2 cut(s)	621, 1299
BstX2I	RGATCY	3 cut(s)	290, 1012, 1270
BstXI	CCANNNNNNTGG	1 cut(s)	804
BstYI	RGATCY	3 cut(s)	290, 1012, 1270
Bsu36I	CCTNAGG	2 cut(s)	474, 549
BsuRI	GGCC	1 cut(s)	108
BtgZI	GCGATG	1 cut(s)	990
BtrI	CACGTC	2 cut(s)	685, 1297
BtsCI	GGATG	7 cut(s)	213, 355, 673, 685, 919, 1184, 1354
BtsIMutI	CAGTG	6 cut(s)	563, 918, 952, 1014, 1341, 1482
BveI	ACCTGC	1 cut(s)	1222
Cac8I	GCNNGC	2 cut(s)	926, 1459
CaiI	CAGNNNCTG	5 cut(s)	11, 62, 103, 398, 770
CciI	TCATGA	1 cut(s)	451
CfoI	GCGC	1 cut(s)	1233
Cfr13I	GGNCC	3 cut(s)	106, 107, 1322
CseI	GACGC	1 cut(s)	392
Csp6I	GTAC	4 cut(s)	76, 342, 429, 1188
CviAII	CATG	6 cut(s)	452, 1069, 1237, 1319, 1454, 1484
CviQI	GTAC	4 cut(s)	76, 342, 429, 1188
DpnI	GATC	8 cut(s)	292, 450, 558, 1014, 1272, 1389, 1474, 1527
DpnII	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
DraIII	CACNNNGTG	1 cut(s)	1364
Eam1104I	CTCTTC	1 cut(s)	588
EarI	CTCTTC	1 cut(s)	588
Ecl136II	GAGCTC	1 cut(s)	530
Eco24I	GRGCYC	4 cut(s)	110, 532, 1005, 1042
Eco31I	GGTCTC	1 cut(s)	1210
Eco32I	GATATC	1 cut(s)	237
Eco47I	GGWCC	1 cut(s)	1322
Eco53kI	GAGCTC	1 cut(s)	530
Eco57I	CTGAAG	1 cut(s)	900
Eco81I	CCTNAGG	2 cut(s)	474, 549
Eco88I	CYCGRG	1 cut(s)	1080
Eco91I	GGTNACC	1 cut(s)	149
EcoICRI	GAGCTC	1 cut(s)	530
EcoO109I	RGGNCCY	1 cut(s)	107
EcoO65I	GGTNACC	1 cut(s)	149
EcoRII	CCWGG	2 cut(s)	102, 305
EcoRV	GATATC	1 cut(s)	237
EcoT38I	GRGCYC	4 cut(s)	110, 532, 1005, 1042
FaeI	CATG	6 cut(s)	455, 1072, 1240, 1322, 1457, 1487
FalI	AAGNNNNNCTT	2 cut(s)	448, 480
FaqI	GGGAC	1 cut(s)	536
FatI	CATG	6 cut(s)	451, 1068, 1236, 1318, 1453, 1483
FbaI	TGATCA	1 cut(s)	448
Fnu4HI	GCNGC	4 cut(s)	57, 200, 1536, 1551
FokI	GGATG	7 cut(s)	200, 362, 680, 692, 926, 1191, 1341
FriOI	GRGCYC	4 cut(s)	110, 532, 1005, 1042
Fsp4HI	GCNGC	4 cut(s)	57, 200, 1536, 1551
FspBI	CTAG	3 cut(s)	158, 170, 339
GlaI	GCGC	1 cut(s)	1232
GluI	GCNGC	4 cut(s)	57, 200, 1536, 1551
GsuI	CTGGAG	1 cut(s)	780
HaeIII	GGCC	1 cut(s)	108
HapII	CCGG	1 cut(s)	240
HgaI	GACGC	1 cut(s)	392
HhaI	GCGC	1 cut(s)	1233
Hin1II	CATG	6 cut(s)	455, 1072, 1240, 1322, 1457, 1487
Hin6I	GCGC	1 cut(s)	1231
HinP1I	GCGC	1 cut(s)	1231
HincII	GTYRAC	1 cut(s)	577
HindII	GTYRAC	1 cut(s)	577
HindIII	AAGCTT	1 cut(s)	1148
HinfI	GANTC	6 cut(s)	8, 588, 800, 1196, 1331, 1380
HpaII	CCGG	1 cut(s)	240
HphI	GGTGA	3 cut(s)	98, 459, 853
Hpy166II	GTNNAC	4 cut(s)	492, 577, 823, 1480
Hpy188I	TCNGA	5 cut(s)	7, 13, 124, 715, 1392
Hpy188III	TCNNGA	7 cut(s)	142, 240, 452, 551, 644, 797, 1080
Hpy8I	GTNNAC	4 cut(s)	492, 577, 823, 1480
HpyAV	CCTTC	4 cut(s)	658, 772, 991, 1333
HpyCH4III	ACNGT	8 cut(s)	52, 737, 947, 1222, 1326, 1427, 1492, 1521
HpyCH4IV	ACGT	3 cut(s)	684, 1048, 1296
HpyCH4V	TGCA	5 cut(s)	56, 1217, 1400, 1439, 1535
HpyF10VI	GCNNNNNNNGC	7 cut(s)	53, 251, 260, 316, 760, 930, 1171
HpySE526I	ACGT	3 cut(s)	684, 1048, 1296
Hsp92II	CATG	6 cut(s)	455, 1072, 1240, 1322, 1457, 1487
HspAI	GCGC	1 cut(s)	1231
Kpn2I	TCCGGA	1 cut(s)	239
Ksp22I	TGATCA	1 cut(s)	448
Kzo9I	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
LmnI	GCTCC	4 cut(s)	242, 1000, 1045, 1068
Lsp1109I	GCAGC	4 cut(s)	68, 211, 1537, 1547
LweI	GCATC	5 cut(s)	470, 658, 967, 1360, 1387
MaeI	CTAG	3 cut(s)	158, 170, 339
MaeII	ACGT	3 cut(s)	684, 1048, 1296
MaeIII	GTNAC	6 cut(s)	131, 149, 737, 859, 947, 1044
MalI	GATC	8 cut(s)	292, 450, 558, 1014, 1272, 1389, 1474, 1527
MboI	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
MflI	RGATCY	3 cut(s)	290, 1012, 1270
MhlI	GDGCHC	4 cut(s)	110, 532, 1005, 1042
MluCI	AATT	5 cut(s)	353, 633, 903, 965, 1020
MlyI	GAGTC	3 cut(s)	2, 582, 1325
MmeI	TCCRAC	1 cut(s)	653
MroI	TCCGGA	1 cut(s)	239
MroXI	GAANNNNTTC	1 cut(s)	624
MseI	TTAA	9 cut(s)	224, 378, 636, 815, 840, 906, 968, 1023, 1152
MslI	CAYNNNNRTG	2 cut(s)	834, 1405
MspA1I	CMGCKG	4 cut(s)	263, 725, 1250, 1538
MspI	CCGG	1 cut(s)	240
MspR9I	CCNGG	2 cut(s)	104, 307
MvaI	CCWGG	2 cut(s)	104, 307
MwoI	GCNNNNNNNGC	7 cut(s)	53, 251, 260, 316, 760, 930, 1171
NdeII	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
NlaIII	CATG	6 cut(s)	455, 1072, 1240, 1322, 1457, 1487
NlaIV	GGNNCC	6 cut(s)	108, 304, 546, 783, 1002, 1041
NmuCI	GTSAC	2 cut(s)	859, 947
NspI	RCATGY	2 cut(s)	1240, 1457
PaeR7I	CTCGAG	1 cut(s)	1080
PagI	TCATGA	1 cut(s)	451
PciI	ACATGT	1 cut(s)	1236
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PdmI	GAANNNNTTC	1 cut(s)	624
PfeI	GAWTC	3 cut(s)	800, 1196, 1380
PkrI	GCNGC	4 cut(s)	58, 201, 1537, 1552
PleI	GAGTC	3 cut(s)	2, 582, 1325
PpsI	GAGTC	3 cut(s)	2, 582, 1325
PscI	ACATGT	1 cut(s)	1236
PsiI	TTATAA	1 cut(s)	1115
Psp124BI	GAGCTC	1 cut(s)	532
Psp6I	CCWGG	2 cut(s)	102, 305
PspEI	GGTNACC	1 cut(s)	149
PspGI	CCWGG	2 cut(s)	102, 305
PspN4I	GGNNCC	6 cut(s)	108, 304, 546, 783, 1002, 1041
PspOMI	GGGCCC	1 cut(s)	106
PspPI	GGNCC	3 cut(s)	106, 107, 1322
PstNI	CAGNNNCTG	5 cut(s)	11, 62, 103, 398, 770
PsuI	RGATCY	3 cut(s)	290, 1012, 1270
PvuII	CAGCTG	3 cut(s)	263, 1250, 1538
RsaI	GTAC	4 cut(s)	77, 343, 430, 1189
RsaNI	GTAC	4 cut(s)	76, 342, 429, 1188
RseI	CAYNNNNRTG	2 cut(s)	834, 1405
SacI	GAGCTC	1 cut(s)	532
SaqAI	TTAA	9 cut(s)	224, 378, 636, 815, 840, 906, 968, 1023, 1152
SatI	GCNGC	4 cut(s)	57, 200, 1536, 1551
Sau3AI	GATC	8 cut(s)	290, 448, 556, 1012, 1270, 1387, 1472, 1525
Sau96I	GGNCC	3 cut(s)	106, 107, 1322
ScaI	AGTACT	1 cut(s)	343
SchI	GAGTC	3 cut(s)	2, 582, 1325
ScrFI	CCNGG	2 cut(s)	104, 307
SduI	GDGCHC	4 cut(s)	110, 532, 1005, 1042
SfaNI	GCATC	5 cut(s)	470, 658, 967, 1360, 1387
SfcI	CTRYAG	3 cut(s)	20, 264, 1488
Sfr274I	CTCGAG	1 cut(s)	1080
SinI	GGWCC	1 cut(s)	1322
SlaI	CTCGAG	1 cut(s)	1080
SmiMI	CAYNNNNRTG	2 cut(s)	834, 1405
SmlI	CTYRAG	1 cut(s)	1080
SmoI	CTYRAG	1 cut(s)	1080
Sse9I	AATT	5 cut(s)	353, 633, 903, 965, 1020
SsiI	CCGC	3 cut(s)	723, 897, 1514
SspMI	CTAG	3 cut(s)	158, 170, 339
SstI	GAGCTC	1 cut(s)	532
StyD4I	CCNGG	2 cut(s)	102, 305
TaaI	ACNGT	8 cut(s)	52, 737, 947, 1222, 1326, 1427, 1492, 1521
TaiI	ACGT	3 cut(s)	687, 1051, 1299
TaqI	TCGA	9 cut(s)	38, 591, 867, 1081, 1092, 1161, 1329, 1429, 1464
TasI	AATT	5 cut(s)	353, 633, 903, 965, 1020
TatI	WGTACW	1 cut(s)	341
TfiI	GAWTC	3 cut(s)	800, 1196, 1380
Tru1I	TTAA	9 cut(s)	224, 378, 636, 815, 840, 906, 968, 1023, 1152
Tru9I	TTAA	9 cut(s)	224, 378, 636, 815, 840, 906, 968, 1023, 1152
TscAI	CASTG	6 cut(s)	570, 925, 952, 1014, 1341, 1482
TseFI	GTSAC	2 cut(s)	859, 947
TseI	GCWGC	4 cut(s)	56, 199, 1535, 1550
Tsp45I	GTSAC	2 cut(s)	859, 947
TspDTI	ATGAA	6 cut(s)	261, 366, 468, 732, 1010, 1436
TspGWI	ACGGA	2 cut(s)	198, 1032
TspRI	CASTG	6 cut(s)	570, 925, 952, 1014, 1341, 1482
VpaK11BI	GGWCC	1 cut(s)	1322
XapI	RAATTY	1 cut(s)	353
XceI	RCATGY	2 cut(s)	1240, 1457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	143
XhoI	CTCGAG	1 cut(s)	1080
XmnI	GAANNNNTTC	1 cut(s)	624
XspI	CTAG	3 cut(s)	158, 170, 339
ZrmI	AGTACT	1 cut(s)	343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.