Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0010500

Physical Location & Seq

Genomic Coordinates Reverse (-)

32818457 .. 32830447

Gene Structure 11991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1261400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGGGTTGGAGGAGGGCTCGCAGAATCACCAGCTAGAAGAAGAAGAAGAGCAAGCGCAGAAAATTCAATCGGGAGTCGGAGTTGCAGCAGCAGCAGGAGGTTGGGAGCAGAAAAGATTGGGGATGGAAGAAGAGTTGAGTGAAGTGGGATGGTTCATTCTGGGCGAAAATCAACAGCATGTTGGTCCCTACGCATTCTCGGAGCTGCGGGAGCATTTCTCAAATGGTTACCTCACCCTCCATACGCTCGTCTGGGCTCAAGGAAGATGCGCATGGCAGCCACTCTCCTCCATTCCCAACCTCGTCACTGCAATATCTCACCACGACCAAGTACCTCATGTTTCAACCGCAGTGCCCCCAATCCCAACTTCTGATGAGGAAGACTTTGACAAATGGCAGAAGCAGGTTAGTGAGACAGAACAAGCAGATAGTGACAGACCTTCCACGCCCCCGGAGGGTGAGGAAGAATTTACCGATGATGATGGGACTACATACAAGTGGGATCGGGGTCTTAGGGCCTGGGTTCCTCAGGATAGCGCTTTCGGGGTAGAAGATATGACATTTTTGCAAGAAGAGGAAGTTTTCCCCGCTGCCAATATTTCTGAGGCCACCGCAAGTGAAGAGGTTAATGCACCTGTAAAGGCTTCTGATCCCTCTAAAGAAGATGATATCAATGGTAGAAGTGAGTTAGAAGGCAATCAAAGTTCTAAGAGGAAATTGTCGGATAAGGAAGCTGACAAGAAGGAAGCTAATAAACCTCCTGATAGTTGGTTTGAGCTGAAGATCAACACACATGTTTATGTAACCGGATTGCCTGATGACGTCACAGTCGACGAAGTGGTAGAGGTCTTTTCCAAATGTGGGATTATAAGGGAGGATCCTGAAACAAAAAAGCCTCGTGTGAAGCTGTATGTTGACAAAGAGACTGGAAAGAAAAAGGGAGACGCACTTGTTACATATATGAAGGAACCATCAGTTGTTTTGGCTACCCAAATTTTGGACGGAACACCTCTACGCCCTGGTGGCAAGGTTTTTATGTCAGTCACCCAAGCTAAGTTTCAGCAGAAAGGGGACAAATTTGTTGCCAAACAAGCAGACAACAAGAGGAAAAAGAAACTGAAGAAGGTGGAAGAGAAGATGCTTGGCTGGGCCGGCCGTGACAATGAAAAGGTGTCAATTCCAGCTACCGTTGTTCTTCGCTACATGTTCACTTCTGCTGAAATGAGGGCAGATGAAAATTTAGGTCCAGAATTACAGGCAGACGTTCAAGAGGAATGTGCGAAGCTTGGTCCAGTGGACTCAGTGAAGGTTTGTGAGAATCATCCCCAGGGAGTTATTTTGGTCAGATTCAAGGATAGGAATGATGCTCAAAAGTGCATAGAAATGATGAATGGGAGATGGTTTGGCGGTAGGCAAATACATGCAAGTGAGGATGATGGTTTAGTTAACCATGCTTCTGTCCGGAATCTGGATGAGGATGCTGCACGGTTAGAGCAGTTTGGCGCCGAACTTGAAGCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4339 RRM_1

Protein Analysis

508

Amino Acids

56.63

Weight (kDa)

4.81

Isoelectric Point (pI)

46.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_2	PF14237	51 - 101	2.9e-14	GYF domain 2
RRM_1	PF00076	266 - 337	7e-06	RNA recognition motif
RRM_1	PF00076	420 - 474	2.8e-09	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16260
fragaria_vesca	FvH4_6g00060
malus_domestica	MD00G1017100.v1.1 MD12G1261400.v1.1
prunus_persica	Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1
pyrus_communis	pycom02g06260 pycom04g22010 pycom04g22020 pycom12g24240
rosa_chinensis	RchiOBHm_Chr3g0447391
rosa_laevigata	RLG00000026003
rosa_multiflora	Rmu_ssc0000473.1_g000016
rosa_roxburghii	Rroxscaffold_6G00425590
rosa_rugosa	Rorug02G0601100
rosa_samantha	Rh3AG001200 Rh3BG000900 Rh3CG000900 Rh3DG001100
rosa_wichuraiana	Rw3G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	869
AasI	GACNNNNNNGTC	1 cut(s)	827
AatII	GACGTC	1 cut(s)	825
Acc16I	TGCGCA	1 cut(s)	271
Acc36I	ACCTGC	1 cut(s)	394
AccB1I	GGYRCC	1 cut(s)	1502
AccB7I	CCANNNNNTGG	1 cut(s)	997
AccI	GTMKAC	1 cut(s)	831
AccIII	TCCGGA	1 cut(s)	1461
AciI	CCGC	5 cut(s)	208, 348, 588, 612, 1407
AclWI	GGATC	4 cut(s)	510, 644, 872, 885
AcoI	YGGCCR	1 cut(s)	1153
AcsI	RAATTY	5 cut(s)	63, 467, 993, 1076, 1237
AcuI	CTGAAG	2 cut(s)	800, 1139
AcyI	GRCGYC	2 cut(s)	822, 1503
AfaI	GTAC	1 cut(s)	333
AfeI	AGCGCT	1 cut(s)	538
AfiI	CCNNNNNNNGG	4 cut(s)	455, 861, 997, 1468
AflIII	ACRYGT	2 cut(s)	793, 1203
AgsI	TTSAA	5 cut(s)	68, 345, 1268, 1351, 1514
AjnI	CCWGG	3 cut(s)	518, 1018, 1326
AjuI	GAANNNNNNNTTGG	4 cut(s)	352, 384, 1041, 1073
Alw26I	GTCTC	3 cut(s)	407, 917, 936
AlwI	GGATC	4 cut(s)	510, 644, 872, 885
Aor13HI	TCCGGA	1 cut(s)	1461
Aor51HI	AGCGCT	1 cut(s)	538
AoxI	GGCC	4 cut(s)	516, 606, 1149, 1153
ApeKI	GCWGC	7 cut(s)	86, 89, 92, 205, 277, 590, 1481
ApoI	RAATTY	5 cut(s)	63, 467, 993, 1076, 1237
AspLEI	GCGC	4 cut(s)	58, 272, 539, 1505
AspS9I	GGNCC	5 cut(s)	185, 516, 1149, 1244, 1289
AsuC2I	CCSGG	1 cut(s)	452
AsuHPI	GGTGA	5 cut(s)	20, 226, 311, 470, 1036
AvaII	GGWCC	3 cut(s)	185, 1244, 1289
AxyI	CCTNAGG	1 cut(s)	528
BaeGI	GKGCMC	1 cut(s)	357
BamHI	GGATCC	1 cut(s)	877
BanI	GGYRCC	1 cut(s)	1502
BanII	GRGCYC	2 cut(s)	20, 259
BauI	CACGAG	1 cut(s)	897
BbsI	GAAGAC	1 cut(s)	387
BbvI	GCAGC	7 cut(s)	98, 101, 104, 192, 289, 577, 1468
BccI	CCATC	6 cut(s)	118, 144, 476, 979, 1392, 1430
BceAI	ACGGC	1 cut(s)	1140
BciT130I	CCWGG	3 cut(s)	520, 1020, 1328
BcnI	CCSGG	1 cut(s)	452
BcoDI	GTCTC	3 cut(s)	407, 917, 936
BfaI	CTAG	1 cut(s)	35
BfoI	RGCGCY	2 cut(s)	540, 1506
BfuAI	ACCTGC	1 cut(s)	394
BglI	GCCNNNNNGGC	1 cut(s)	1023
BisI	GCNGC	7 cut(s)	87, 90, 93, 206, 278, 591, 1482
BlsI	GCNGC	7 cut(s)	88, 91, 94, 207, 279, 592, 1483
Bme1390I	CCNGG	4 cut(s)	452, 520, 1020, 1328
Bme18I	GGWCC	3 cut(s)	185, 1244, 1289
BmgT120I	GGNCC	5 cut(s)	185, 516, 1149, 1244, 1289
BmiI	GGNNCC	5 cut(s)	187, 525, 879, 969, 1504
BmrFI	CCNGG	4 cut(s)	452, 520, 1020, 1328
BmsI	GCATC	4 cut(s)	257, 1128, 1354, 1468
BpiI	GAAGAC	1 cut(s)	387
BplI	GAGNNNNNCTC	3 cut(s)	34, 203, 235
BpuEI	CTTGAG	1 cut(s)	243
BpuMI	CCSGG	1 cut(s)	452
BsaHI	GRCGYC	2 cut(s)	822, 1503
BsaJI	CCNNGG	5 cut(s)	450, 519, 1018, 1326, 1327
BsaWI	WCCGGW	2 cut(s)	806, 1461
BsaXI	ACNNNNNCTCC	2 cut(s)	66, 96
Bsc4I	CCNNNNNNNGG	4 cut(s)	455, 861, 997, 1468
Bse118I	RCCGGY	1 cut(s)	1151
Bse1I	ACTGG	2 cut(s)	931, 1292
Bse21I	CCTNAGG	1 cut(s)	528
BseAI	TCCGGA	1 cut(s)	1461
BseBI	CCWGG	3 cut(s)	520, 1020, 1328
BseDI	CCNNGG	5 cut(s)	450, 519, 1018, 1326, 1327
BseGI	GGATG	6 cut(s)	129, 155, 1321, 1438, 1477, 1483
BseLI	CCNNNNNNNGG	4 cut(s)	455, 861, 997, 1468
BseMII	CTCAG	3 cut(s)	542, 594, 1314
BseNI	ACTGG	2 cut(s)	931, 1292
BseRI	GAGGAG	2 cut(s)	26, 277
BseSI	GKGCMC	1 cut(s)	357
BseX3I	CGGCCG	1 cut(s)	1153
BseXI	GCAGC	7 cut(s)	98, 101, 104, 192, 289, 577, 1468
BseYI	CCCAGC	1 cut(s)	1146
BsgI	GTGCAG	1 cut(s)	1467
Bsh1285I	CGRYCG	1 cut(s)	1156
BshFI	GGCC	4 cut(s)	518, 608, 1151, 1155
BshNI	GGYRCC	1 cut(s)	1502
BsiEI	CGRYCG	1 cut(s)	1156
BsiSI	CCGG	4 cut(s)	452, 807, 1152, 1462
BslFI	GGGAC	3 cut(s)	171, 499, 1085
BslI	CCNNNNNNNGG	4 cut(s)	455, 861, 997, 1468
BsmAI	GTCTC	3 cut(s)	407, 917, 936
BsmBI	CGTCTC	1 cut(s)	936
BsmFI	GGGAC	3 cut(s)	171, 499, 1085
BsmI	GAATGC	1 cut(s)	194
BsnI	GGCC	4 cut(s)	518, 608, 1151, 1155
Bsp1286I	GDGCHC	3 cut(s)	20, 259, 357
Bsp13I	TCCGGA	1 cut(s)	1461
Bsp143I	GATC	4 cut(s)	502, 649, 783, 877
BspACI	CCGC	5 cut(s)	208, 348, 588, 612, 1407
BspANI	GGCC	4 cut(s)	518, 608, 1151, 1155
BspCNI	CTCAG	3 cut(s)	541, 595, 1313
BspEI	TCCGGA	1 cut(s)	1461
BspLI	GGNNCC	5 cut(s)	187, 525, 879, 969, 1504
BspMI	ACCTGC	1 cut(s)	394
BspPI	GGATC	4 cut(s)	510, 644, 872, 885
BspQI	GCTCTTC	1 cut(s)	42
BspT107I	GGYRCC	1 cut(s)	1502
BsrFI	RCCGGY	1 cut(s)	1151
BsrI	ACTGG	2 cut(s)	931, 1292
BssAI	RCCGGY	1 cut(s)	1151
BssECI	CCNNGG	5 cut(s)	450, 519, 1018, 1326, 1327
BssMI	GATC	4 cut(s)	502, 649, 783, 877
BssNI	GRCGYC	2 cut(s)	822, 1503
BssSI	CACGAG	1 cut(s)	897
Bst2BI	CACGAG	1 cut(s)	897
Bst2UI	CCWGG	3 cut(s)	520, 1020, 1328
Bst4CI	ACNGT	3 cut(s)	829, 1189, 1488
Bst6I	CTCTTC	5 cut(s)	42, 126, 567, 615, 1125
BstACI	GRCGYC	2 cut(s)	822, 1503
BstC8I	GCNNGC	3 cut(s)	20, 54, 1153
BstDEI	CTNAG	6 cut(s)	512, 528, 603, 708, 1053, 1300
BstEII	GGTNACC	1 cut(s)	227
BstF5I	GGATG	6 cut(s)	129, 155, 1321, 1438, 1477, 1483
BstH2I	RGCGCY	2 cut(s)	540, 1506
BstHHI	GCGC	4 cut(s)	58, 272, 539, 1505
BstKTI	GATC	4 cut(s)	505, 652, 786, 880
BstMAI	GTCTC	3 cut(s)	407, 917, 936
BstMBI	GATC	4 cut(s)	502, 649, 783, 877
BstMCI	CGRYCG	1 cut(s)	1156
BstMWI	GCNNNNNNNGC	5 cut(s)	92, 211, 1023, 1091, 1152
BstNI	CCWGG	3 cut(s)	520, 1020, 1328
BstNSI	RCATGY	4 cut(s)	182, 797, 1207, 1424
BstPI	GGTNACC	1 cut(s)	227
BstSCI	CCNGG	4 cut(s)	450, 518, 1018, 1326
BstSLI	GKGCMC	1 cut(s)	357
BstV1I	GCAGC	7 cut(s)	98, 101, 104, 192, 289, 577, 1468
BstV2I	GAAGAC	1 cut(s)	387
BstX2I	RGATCY	1 cut(s)	877
BstYI	RGATCY	1 cut(s)	877
BstZI	CGGCCG	1 cut(s)	1153
Bsu36I	CCTNAGG	1 cut(s)	528
BsuRI	GGCC	4 cut(s)	518, 608, 1151, 1155
BtsCI	GGATG	6 cut(s)	129, 155, 1321, 1438, 1477, 1483
BtsI	GCAGTG	2 cut(s)	306, 357
BtsIMutI	CAGTG	4 cut(s)	306, 357, 1299, 1308
BveI	ACCTGC	1 cut(s)	394
Cac8I	GCNNGC	3 cut(s)	20, 54, 1153
CfoI	GCGC	4 cut(s)	58, 272, 539, 1505
Cfr10I	RCCGGY	1 cut(s)	1151
Cfr13I	GGNCC	5 cut(s)	185, 516, 1149, 1244, 1289
CseI	GACGC	1 cut(s)	953
Csp6I	GTAC	1 cut(s)	332
CviAII	CATG	7 cut(s)	179, 273, 338, 794, 1204, 1421, 1451
CviQI	GTAC	1 cut(s)	332
DdeI	CTNAG	6 cut(s)	512, 528, 603, 708, 1053, 1300
DinI	GGCGCC	1 cut(s)	1504
DpnI	GATC	4 cut(s)	504, 651, 785, 879
DpnII	GATC	4 cut(s)	502, 649, 783, 877
DrdI	GACNNNNNNGTC	1 cut(s)	827
DseDI	GACNNNNNNGTC	1 cut(s)	827
EaeI	YGGCCR	1 cut(s)	1153
EagI	CGGCCG	1 cut(s)	1153
Eam1104I	CTCTTC	5 cut(s)	42, 126, 567, 615, 1125
EarI	CTCTTC	5 cut(s)	42, 126, 567, 615, 1125
EclXI	CGGCCG	1 cut(s)	1153
Eco24I	GRGCYC	2 cut(s)	20, 259
Eco32I	GATATC	1 cut(s)	670
Eco47I	GGWCC	3 cut(s)	185, 1244, 1289
Eco47III	AGCGCT	1 cut(s)	538
Eco52I	CGGCCG	1 cut(s)	1153
Eco57I	CTGAAG	2 cut(s)	800, 1139
Eco81I	CCTNAGG	1 cut(s)	528
Eco91I	GGTNACC	1 cut(s)	227
EcoO109I	RGGNCCY	1 cut(s)	516
EcoO65I	GGTNACC	1 cut(s)	227
EcoRII	CCWGG	3 cut(s)	518, 1018, 1326
EcoRV	GATATC	1 cut(s)	670
EcoT38I	GRGCYC	2 cut(s)	20, 259
EgeI	GGCGCC	1 cut(s)	1504
EheI	GGCGCC	1 cut(s)	1504
Esp3I	CGTCTC	1 cut(s)	936
FaeI	CATG	7 cut(s)	182, 276, 341, 797, 1207, 1424, 1454
FaqI	GGGAC	3 cut(s)	171, 499, 1085
FatI	CATG	7 cut(s)	178, 272, 337, 793, 1203, 1420, 1450
FauI	CCCGC	2 cut(s)	201, 595
FblI	GTMKAC	1 cut(s)	831
Fnu4HI	GCNGC	7 cut(s)	87, 90, 93, 206, 278, 591, 1482
FokI	GGATG	6 cut(s)	136, 162, 1308, 1445, 1484, 1490
FriOI	GRGCYC	2 cut(s)	20, 259
FseI	GGCCGGCC	1 cut(s)	1155
Fsp4HI	GCNGC	7 cut(s)	87, 90, 93, 206, 278, 591, 1482
FspAI	RTGCGCAY	1 cut(s)	271
FspBI	CTAG	1 cut(s)	35
FspI	TGCGCA	1 cut(s)	271
GlaI	GCGC	4 cut(s)	57, 271, 538, 1504
GluI	GCNGC	7 cut(s)	87, 90, 93, 206, 278, 591, 1482
GsaI	CCCAGC	1 cut(s)	1150
HaeII	RGCGCY	2 cut(s)	540, 1506
HaeIII	GGCC	4 cut(s)	518, 608, 1151, 1155
HapII	CCGG	4 cut(s)	452, 807, 1152, 1462
HgaI	GACGC	1 cut(s)	953
HhaI	GCGC	4 cut(s)	58, 272, 539, 1505
Hin1I	GRCGYC	2 cut(s)	822, 1503
Hin1II	CATG	7 cut(s)	182, 276, 341, 797, 1207, 1424, 1454
Hin6I	GCGC	4 cut(s)	56, 270, 537, 1503
HinP1I	GCGC	4 cut(s)	56, 270, 537, 1503
HincII	GTYRAC	3 cut(s)	832, 916, 1447
HindII	GTYRAC	3 cut(s)	832, 916, 1447
HindIII	AAGCTT	1 cut(s)	1283
HinfI	GANTC	6 cut(s)	25, 75, 1298, 1318, 1347, 1465
HpaI	GTTAAC	1 cut(s)	1447
HpaII	CCGG	4 cut(s)	452, 807, 1152, 1462
HphI	GGTGA	5 cut(s)	20, 226, 311, 470, 1036
Hpy166II	GTNNAC	5 cut(s)	832, 916, 1209, 1297, 1447
Hpy188I	TCNGA	7 cut(s)	80, 202, 373, 604, 649, 724, 1346
Hpy188III	TCNNGA	8 cut(s)	72, 530, 761, 881, 1247, 1268, 1462, 1469
Hpy8I	GTNNAC	5 cut(s)	832, 916, 1209, 1297, 1447
Hpy99I	CGWCG	1 cut(s)	836
HpyAV	CCTTC	6 cut(s)	450, 686, 736, 958, 1117, 1300
HpyCH4III	ACNGT	3 cut(s)	829, 1189, 1488
HpyCH4IV	ACGT	2 cut(s)	822, 1263
HpyCH4V	TGCA	7 cut(s)	86, 311, 568, 632, 1377, 1424, 1484
HpyF10VI	GCNNNNNNNGC	5 cut(s)	92, 211, 1023, 1091, 1152
HpyF3I	CTNAG	6 cut(s)	512, 528, 603, 708, 1053, 1300
HpySE526I	ACGT	2 cut(s)	822, 1263
Hsp92I	GRCGYC	2 cut(s)	822, 1503
Hsp92II	CATG	7 cut(s)	182, 276, 341, 797, 1207, 1424, 1454
HspAI	GCGC	4 cut(s)	56, 270, 537, 1503
KasI	GGCGCC	1 cut(s)	1502
Kpn2I	TCCGGA	1 cut(s)	1461
KroI	GCCGGC	1 cut(s)	1151
KroNI	GCCGGC	1 cut(s)	1153
KspAI	GTTAAC	1 cut(s)	1447
Kzo9I	GATC	4 cut(s)	502, 649, 783, 877
LguI	GCTCTTC	1 cut(s)	42
LmnI	GCTCC	3 cut(s)	106, 202, 211
Lsp1109I	GCAGC	7 cut(s)	98, 101, 104, 192, 289, 577, 1468
LweI	GCATC	4 cut(s)	257, 1128, 1354, 1468
MaeI	CTAG	1 cut(s)	35
MaeII	ACGT	2 cut(s)	822, 1263
MaeIII	GTNAC	8 cut(s)	227, 304, 431, 802, 823, 952, 1042, 1157
MalI	GATC	4 cut(s)	504, 651, 785, 879
MboI	GATC	4 cut(s)	502, 649, 783, 877
MflI	RGATCY	1 cut(s)	877
MhlI	GDGCHC	3 cut(s)	20, 259, 357
MluCI	AATT	8 cut(s)	63, 467, 716, 993, 1076, 1176, 1237, 1250
Mly113I	GGCGCC	1 cut(s)	1503
MlyI	GAGTC	2 cut(s)	84, 1292
MmeI	TCCRAC	2 cut(s)	58, 702
MroI	TCCGGA	1 cut(s)	1461
MroNI	GCCGGC	1 cut(s)	1151
MseI	TTAA	2 cut(s)	627, 1446
MslI	CAYNNNNRTG	4 cut(s)	496, 798, 1382, 1425
MspA1I	CMGCKG	1 cut(s)	590
MspI	CCGG	4 cut(s)	452, 807, 1152, 1462
MspR9I	CCNGG	4 cut(s)	452, 520, 1020, 1328
Mva1269I	GAATGC	1 cut(s)	194
MvaI	CCWGG	3 cut(s)	520, 1020, 1328
MwoI	GCNNNNNNNGC	5 cut(s)	92, 211, 1023, 1091, 1152
NaeI	GCCGGC	1 cut(s)	1153
NarI	GGCGCC	1 cut(s)	1503
NciI	CCSGG	1 cut(s)	452
NdeII	GATC	4 cut(s)	502, 649, 783, 877
NgoMIV	GCCGGC	1 cut(s)	1151
NlaIII	CATG	7 cut(s)	182, 276, 341, 797, 1207, 1424, 1454
NlaIV	GGNNCC	5 cut(s)	187, 525, 879, 969, 1504
NmuCI	GTSAC	5 cut(s)	304, 431, 823, 1042, 1157
NsbI	TGCGCA	1 cut(s)	271
NspI	RCATGY	4 cut(s)	182, 797, 1207, 1424
PasI	CCCWGGG	1 cut(s)	1327
PciI	ACATGT	2 cut(s)	793, 1203
PciSI	GCTCTTC	1 cut(s)	42
PcsI	WCGNNNNNNNCGW	1 cut(s)	828
PctI	GAATGC	1 cut(s)	194
PdiI	GCCGGC	1 cut(s)	1153
PfeI	GAWTC	4 cut(s)	25, 1318, 1347, 1465
PflMI	CCANNNNNTGG	1 cut(s)	997
PkrI	GCNGC	7 cut(s)	88, 91, 94, 207, 279, 592, 1483
PleI	GAGTC	2 cut(s)	83, 1292
PluTI	GGCGCC	1 cut(s)	1506
PpsI	GAGTC	2 cut(s)	83, 1292
PscI	ACATGT	2 cut(s)	793, 1203
PsiI	TTATAA	1 cut(s)	869
Psp6I	CCWGG	3 cut(s)	518, 1018, 1326
PspEI	GGTNACC	1 cut(s)	227
PspFI	CCCAGC	1 cut(s)	1146
PspGI	CCWGG	3 cut(s)	518, 1018, 1326
PspN4I	GGNNCC	5 cut(s)	187, 525, 879, 969, 1504
PspPI	GGNCC	5 cut(s)	185, 516, 1149, 1244, 1289
PsuI	RGATCY	1 cut(s)	877
RigI	GGCCGGCC	1 cut(s)	1155
RsaI	GTAC	1 cut(s)	333
RsaNI	GTAC	1 cut(s)	332
RseI	CAYNNNNRTG	4 cut(s)	496, 798, 1382, 1425
SalI	GTCGAC	1 cut(s)	830
SapI	GCTCTTC	1 cut(s)	42
SaqAI	TTAA	2 cut(s)	627, 1446
SatI	GCNGC	7 cut(s)	87, 90, 93, 206, 278, 591, 1482
Sau3AI	GATC	4 cut(s)	502, 649, 783, 877
Sau96I	GGNCC	5 cut(s)	185, 516, 1149, 1244, 1289
SchI	GAGTC	2 cut(s)	84, 1292
ScrFI	CCNGG	4 cut(s)	452, 520, 1020, 1328
SduI	GDGCHC	3 cut(s)	20, 259, 357
SfaNI	GCATC	4 cut(s)	257, 1128, 1354, 1468
SfoI	GGCGCC	1 cut(s)	1504
SinI	GGWCC	3 cut(s)	185, 1244, 1289
SmiMI	CAYNNNNRTG	4 cut(s)	496, 798, 1382, 1425
SmlI	CTYRAG	1 cut(s)	258
SmoI	CTYRAG	1 cut(s)	258
Sse9I	AATT	8 cut(s)	63, 467, 716, 993, 1076, 1176, 1237, 1250
SsiI	CCGC	5 cut(s)	208, 348, 588, 612, 1407
SspDI	GGCGCC	1 cut(s)	1502
SspI	AATATT	1 cut(s)	598
SspMI	CTAG	1 cut(s)	35
StyD4I	CCNGG	4 cut(s)	450, 518, 1018, 1326
TaaI	ACNGT	3 cut(s)	829, 1189, 1488
TaiI	ACGT	2 cut(s)	825, 1266
TaqI	TCGA	1 cut(s)	831
TasI	AATT	8 cut(s)	63, 467, 716, 993, 1076, 1176, 1237, 1250
TfiI	GAWTC	4 cut(s)	25, 1318, 1347, 1465
Tru1I	TTAA	2 cut(s)	627, 1446
Tru9I	TTAA	2 cut(s)	627, 1446
TscAI	CASTG	4 cut(s)	313, 357, 1299, 1308
TseFI	GTSAC	5 cut(s)	304, 431, 823, 1042, 1157
TseI	GCWGC	7 cut(s)	86, 89, 92, 205, 277, 590, 1481
Tsp45I	GTSAC	5 cut(s)	304, 431, 823, 1042, 1157
TspDTI	ATGAA	5 cut(s)	145, 977, 1179, 1248, 1403
TspGWI	ACGGA	1 cut(s)	1017
TspRI	CASTG	4 cut(s)	313, 357, 1299, 1308
Van91I	CCANNNNNTGG	1 cut(s)	997
VpaK11BI	GGWCC	3 cut(s)	185, 1244, 1289
XapI	RAATTY	5 cut(s)	63, 467, 993, 1076, 1237
XceI	RCATGY	4 cut(s)	182, 797, 1207, 1424
XmiI	GTMKAC	1 cut(s)	831
XspI	CTAG	1 cut(s)	35
ZraI	GACGTC	1 cut(s)	823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.