Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0010500

Physical Location & Seq

Genomic Coordinates Reverse (-)

2497129 .. 2502082

Gene Structure 4954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1017100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGACGTTGGAGAAGGACTTGCAGAGTCACCACCTAGAAGAAGAAGAAGAAGAAGAAGAAGAGCAAGCGCGGCAAATTCATTCGGGAGTTGCAGCAGCAGCAGGGTGGGAGCATAAAAGATTGGGGATGGAAGAAGAGTTGAGCGAAGTGGGATGGTTCATTCTGGGCGAAAATCAACAGCATGTTGGTCCCTATGCATTCTCGGAGCTGCGGGAGCATTTCTTAAATGGCTACCTCACCCTCCATACGCTCATCTGGGCTCAAGGAAGAAGCGCATGGCAGCCACTCTCCTCCATTCCCGACCTCGTCACTGCAATATCCCATCACGACCAAGTATCTCATGTTTCAACCGCAGTGCCCCCAATCCCAACTGATGATGAGGACGACTTCGACAAATGGCAGAAGCATGTATGCGAGGCAGAACAAGCAGATAGTGACAGACCTTCTACGCCCCCCGAGGGAGAGGAAGAATTCACCGATGATGATGGGACAACATACAAGTGGGATCAGGGTCTTAGGGCTTGGGTTCCCCAGGATAGCGCTTTCGGGGTAGAAGATATGACTTTTTTGCAGGAAGAGGAAGTTTTCCCAGCTGCCAATTTTTCTGAAGCCACCGCAAGTGAAGAGGTTAATGCACCTGTAAAGGCTTCCAATCCCTCTAAAGAAGATGATATCAATGGTAGCAGTGAGTTAGAAGGCAATCAAAGTTCTAAGAGGAAATTGTCAGATAAGGAAGCTGACAAGAAGGAAGCTAATAAACCTCCTGAAAGTTGGTTTGAGCTGAAGATCAACACGCATGTTTATGCAACCGGATTGCCTGATGACGTCACAGTCGACGAAGTGGTAGAGGTGTTTTCCAAATGTGGGATCATAAAGGAGGATCCTGAAACAAAAAAACCTCGTGTGAAGCTGTATGTTGACAAAGCAACTGGAAAGAAAAAAGGAGACGCACTTGTTACTTATATGAAGGAACCATCGGTTGTTTTGGCTACCCAAATTTTGGACGGAACACCTCTACGCCCTGGTGGCAAGGTTCTTATGTCGGTCACCCAAGCCAAGTTTCAGCAAAAAGGGGACACATTTGTTACCAAACAAGCAGACAACAAGAGGAAAAAGAAACTGAAGAAAGTGGAAGAGAAGATGCTTGGCTGGGCCGGCCATGACGATGGAAAGGTGTCAATTCCAGCTACTGTTATTCTTCGCTACATGTTCACTCCTGCTGAAATGAGGGCAGATGAAAATTTAGGTCCAGAATTGCAGGCGGATGTTCAGGAGGAATGTGTGAAGCTTGGTCCGGTGGACTCAGTGAAGGTTTGTGAGAATCATCCCCAGGGAGTTGTTGTGGTCAGATTCAAGGATAGGAATGATGCTCAGAAGTGCATAGAAATGATGAATGGGCGATGGTTTGGCGGTAGACAAGTACATGCAAGTGAGGATGATGGTTTAGTTAACCATGCTTCTGTCCGGAATCTGGATGAGGATGCTGCAAGGTTAGAGCAGTTTGGTGCCGAACTTGAAGCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4339 RRM_1

Protein Analysis

509

Amino Acids

56.83

Weight (kDa)

4.77

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_2	PF14237	52 - 102	1e-14	GYF domain 2
RRM_1	PF00076	422 - 475	1.3e-08	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16260
fragaria_vesca	FvH4_6g00060
malus_domestica	MD00G1017100.v1.1 MD12G1261400.v1.1
prunus_persica	Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1
pyrus_communis	pycom02g06260 pycom04g22010 pycom04g22020 pycom12g24240
rosa_chinensis	RchiOBHm_Chr3g0447391
rosa_laevigata	RLG00000026003
rosa_multiflora	Rmu_ssc0000473.1_g000016
rosa_roxburghii	Rroxscaffold_6G00425590
rosa_rugosa	Rorug02G0601100
rosa_samantha	Rh3AG001200 Rh3BG000900 Rh3CG000900 Rh3DG001100
rosa_wichuraiana	Rw3G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	830
AatII	GACGTC	1 cut(s)	828
AccB1I	GGYRCC	1 cut(s)	1505
AccB7I	CCANNNNNTGG	1 cut(s)	1000
AccI	GTMKAC	2 cut(s)	834, 1414
AccII	CGCG	1 cut(s)	70
AccIII	TCCGGA	1 cut(s)	1464
AciI	CCGC	6 cut(s)	70, 211, 351, 615, 1262, 1410
AclWI	GGATC	4 cut(s)	513, 875, 875, 888
AcoI	YGGCCR	1 cut(s)	1156
AcsI	RAATTY	4 cut(s)	75, 470, 996, 1240
AcuI	CTGAAG	3 cut(s)	627, 803, 1142
AcyI	GRCGYC	1 cut(s)	825
AfaI	GTAC	1 cut(s)	1422
AfeI	AGCGCT	1 cut(s)	541
AfiI	CCNNNNNNNGG	4 cut(s)	458, 864, 1000, 1471
AflIII	ACRYGT	1 cut(s)	1206
AgsI	TTSAA	3 cut(s)	348, 1354, 1517
AjnI	CCWGG	3 cut(s)	531, 1021, 1329
AjuI	GAANNNNNNNTTGG	2 cut(s)	1044, 1076
AluBI	AGCT	9 cut(s)	208, 593, 737, 752, 781, 910, 1187, 1288, 1520
AluI	AGCT	9 cut(s)	208, 593, 737, 752, 781, 910, 1187, 1288, 1520
Alw26I	GTCTC	1 cut(s)	939
AlwI	GGATC	4 cut(s)	513, 875, 875, 888
AlwNI	CAGNNNCTG	1 cut(s)	1190
Ama87I	CYCGRG	1 cut(s)	455
Aor13HI	TCCGGA	1 cut(s)	1464
Aor51HI	AGCGCT	1 cut(s)	541
AoxI	GGCC	2 cut(s)	1152, 1156
ApeKI	GCWGC	7 cut(s)	92, 95, 98, 208, 280, 593, 1484
ApoI	RAATTY	4 cut(s)	75, 470, 996, 1240
AspLEI	GCGC	3 cut(s)	70, 275, 542
AspS9I	GGNCC	4 cut(s)	188, 1152, 1247, 1292
AsuHPI	GGTGA	4 cut(s)	20, 229, 466, 1039
AvaI	CYCGRG	1 cut(s)	455
AvaII	GGWCC	3 cut(s)	188, 1247, 1292
BaeGI	GKGCMC	1 cut(s)	360
BamHI	GGATCC	1 cut(s)	880
BanI	GGYRCC	1 cut(s)	1505
BanII	GRGCYC	1 cut(s)	262
BauI	CACGAG	1 cut(s)	900
BbvI	GCAGC	7 cut(s)	104, 107, 110, 195, 292, 580, 1471
BccI	CCATC	8 cut(s)	121, 147, 330, 479, 982, 1160, 1395, 1433
BciT130I	CCWGG	3 cut(s)	533, 1023, 1331
BcoDI	GTCTC	1 cut(s)	939
BfaI	CTAG	1 cut(s)	35
BfoI	RGCGCY	1 cut(s)	543
BglI	GCCNNNNNGGC	1 cut(s)	1026
BisI	GCNGC	8 cut(s)	71, 93, 96, 99, 209, 281, 594, 1485
BlsI	GCNGC	8 cut(s)	72, 94, 97, 100, 210, 282, 595, 1486
Bme1390I	CCNGG	3 cut(s)	533, 1023, 1331
Bme18I	GGWCC	3 cut(s)	188, 1247, 1292
BmeT110I	CYCGRG	1 cut(s)	455
BmgT120I	GGNCC	4 cut(s)	188, 1152, 1247, 1292
BmiI	GGNNCC	5 cut(s)	190, 528, 882, 972, 1507
BmrFI	CCNGG	3 cut(s)	533, 1023, 1331
BmsI	GCATC	3 cut(s)	1131, 1357, 1471
BpuEI	CTTGAG	1 cut(s)	246
BsaHI	GRCGYC	1 cut(s)	825
BsaJI	CCNNGG	5 cut(s)	456, 531, 1021, 1329, 1330
BsaWI	WCCGGW	3 cut(s)	809, 1294, 1464
BsaXI	ACNNNNNCTCC	2 cut(s)	1326, 1356
Bsc4I	CCNNNNNNNGG	4 cut(s)	458, 864, 1000, 1471
Bse118I	RCCGGY	1 cut(s)	1154
Bse1I	ACTGG	1 cut(s)	934
BseAI	TCCGGA	1 cut(s)	1464
BseBI	CCWGG	3 cut(s)	533, 1023, 1331
BseDI	CCNNGG	5 cut(s)	456, 531, 1021, 1329, 1330
BseGI	GGATG	7 cut(s)	132, 158, 1270, 1324, 1441, 1480, 1486
BseLI	CCNNNNNNNGG	4 cut(s)	458, 864, 1000, 1471
BseMII	CTCAG	2 cut(s)	1317, 1385
BseNI	ACTGG	1 cut(s)	934
BseRI	GAGGAG	1 cut(s)	280
BseSI	GKGCMC	1 cut(s)	360
BseXI	GCAGC	7 cut(s)	104, 107, 110, 195, 292, 580, 1471
BseYI	CCCAGC	2 cut(s)	589, 1149
Bsh1236I	CGCG	1 cut(s)	70
BshFI	GGCC	2 cut(s)	1154, 1158
BshNI	GGYRCC	1 cut(s)	1505
BsiHKCI	CYCGRG	1 cut(s)	455
BsiSI	CCGG	4 cut(s)	810, 1155, 1295, 1465
BslFI	GGGAC	3 cut(s)	174, 502, 1088
BslI	CCNNNNNNNGG	4 cut(s)	458, 864, 1000, 1471
BsmAI	GTCTC	1 cut(s)	939
BsmBI	CGTCTC	1 cut(s)	939
BsmFI	GGGAC	3 cut(s)	174, 502, 1088
BsmI	GAATGC	1 cut(s)	197
BsnI	GGCC	2 cut(s)	1154, 1158
BsoBI	CYCGRG	1 cut(s)	455
Bsp1286I	GDGCHC	2 cut(s)	262, 360
Bsp13I	TCCGGA	1 cut(s)	1464
Bsp143I	GATC	4 cut(s)	505, 786, 867, 880
BspACI	CCGC	6 cut(s)	70, 211, 351, 615, 1262, 1410
BspANI	GGCC	2 cut(s)	1154, 1158
BspCNI	CTCAG	2 cut(s)	1316, 1384
BspEI	TCCGGA	1 cut(s)	1464
BspFNI	CGCG	1 cut(s)	70
BspLI	GGNNCC	5 cut(s)	190, 528, 882, 972, 1507
BspPI	GGATC	4 cut(s)	513, 875, 875, 888
BspQI	GCTCTTC	1 cut(s)	54
BspT107I	GGYRCC	1 cut(s)	1505
BsrFI	RCCGGY	1 cut(s)	1154
BsrI	ACTGG	1 cut(s)	934
BssAI	RCCGGY	1 cut(s)	1154
BssECI	CCNNGG	5 cut(s)	456, 531, 1021, 1329, 1330
BssMI	GATC	4 cut(s)	505, 786, 867, 880
BssNI	GRCGYC	1 cut(s)	825
BssSI	CACGAG	1 cut(s)	900
Bst2BI	CACGAG	1 cut(s)	900
Bst2UI	CCWGG	3 cut(s)	533, 1023, 1331
Bst4CI	ACNGT	2 cut(s)	832, 1192
Bst6I	CTCTTC	5 cut(s)	54, 129, 570, 618, 1128
BstACI	GRCGYC	1 cut(s)	825
BstC8I	GCNNGC	3 cut(s)	66, 1156, 1260
BstDEI	CTNAG	4 cut(s)	515, 711, 1303, 1371
BstEII	GGTNACC	1 cut(s)	1045
BstF5I	GGATG	7 cut(s)	132, 158, 1270, 1324, 1441, 1480, 1486
BstFNI	CGCG	1 cut(s)	70
BstH2I	RGCGCY	1 cut(s)	543
BstHHI	GCGC	3 cut(s)	70, 275, 542
BstKTI	GATC	4 cut(s)	508, 789, 870, 883
BstMAI	GTCTC	1 cut(s)	939
BstMBI	GATC	4 cut(s)	505, 786, 867, 880
BstMWI	GCNNNNNNNGC	6 cut(s)	70, 98, 214, 425, 1026, 1155
BstNI	CCWGG	3 cut(s)	533, 1023, 1331
BstNSI	RCATGY	5 cut(s)	185, 410, 800, 1210, 1427
BstPI	GGTNACC	1 cut(s)	1045
BstSCI	CCNGG	3 cut(s)	531, 1021, 1329
BstSLI	GKGCMC	1 cut(s)	360
BstUI	CGCG	1 cut(s)	70
BstV1I	GCAGC	7 cut(s)	104, 107, 110, 195, 292, 580, 1471
BstX2I	RGATCY	1 cut(s)	880
BstXI	CCANNNNNNTGG	1 cut(s)	1166
BstYI	RGATCY	1 cut(s)	880
BsuRI	GGCC	2 cut(s)	1154, 1158
BtgZI	GCGATG	1 cut(s)	1414
BtsCI	GGATG	7 cut(s)	132, 158, 1270, 1324, 1441, 1480, 1486
BtsI	GCAGTG	3 cut(s)	309, 360, 691
BtsIMutI	CAGTG	4 cut(s)	309, 360, 691, 1311
Cac8I	GCNNGC	3 cut(s)	66, 1156, 1260
CaiI	CAGNNNCTG	1 cut(s)	1190
CfoI	GCGC	3 cut(s)	70, 275, 542
Cfr10I	RCCGGY	1 cut(s)	1154
Cfr13I	GGNCC	4 cut(s)	188, 1152, 1247, 1292
CseI	GACGC	1 cut(s)	956
Csp6I	GTAC	1 cut(s)	1421
CviAII	CATG	9 cut(s)	182, 276, 341, 407, 797, 1160, 1207, 1424, 1454
CviQI	GTAC	1 cut(s)	1421
DdeI	CTNAG	4 cut(s)	515, 711, 1303, 1371
DpnI	GATC	4 cut(s)	507, 788, 869, 882
DpnII	GATC	4 cut(s)	505, 786, 867, 880
DrdI	GACNNNNNNGTC	1 cut(s)	830
DseDI	GACNNNNNNGTC	1 cut(s)	830
EaeI	YGGCCR	1 cut(s)	1156
Eam1104I	CTCTTC	5 cut(s)	54, 129, 570, 618, 1128
EarI	CTCTTC	5 cut(s)	54, 129, 570, 618, 1128
EciI	GGCGGA	1 cut(s)	1277
Eco24I	GRGCYC	1 cut(s)	262
Eco32I	GATATC	1 cut(s)	673
Eco47I	GGWCC	3 cut(s)	188, 1247, 1292
Eco47III	AGCGCT	1 cut(s)	541
Eco57I	CTGAAG	3 cut(s)	627, 803, 1142
Eco88I	CYCGRG	1 cut(s)	455
Eco91I	GGTNACC	1 cut(s)	1045
EcoO65I	GGTNACC	1 cut(s)	1045
EcoRI	GAATTC	1 cut(s)	470
EcoRII	CCWGG	3 cut(s)	531, 1021, 1329
EcoRV	GATATC	1 cut(s)	673
EcoT22I	ATGCAT	1 cut(s)	199
EcoT38I	GRGCYC	1 cut(s)	262
Esp3I	CGTCTC	1 cut(s)	939
FaeI	CATG	9 cut(s)	185, 279, 344, 410, 800, 1163, 1210, 1427, 1457
FaqI	GGGAC	3 cut(s)	174, 502, 1088
FatI	CATG	9 cut(s)	181, 275, 340, 406, 796, 1159, 1206, 1423, 1453
FauI	CCCGC	1 cut(s)	204
FblI	GTMKAC	2 cut(s)	834, 1414
Fnu4HI	GCNGC	8 cut(s)	71, 93, 96, 99, 209, 281, 594, 1485
FokI	GGATG	7 cut(s)	139, 165, 1277, 1311, 1448, 1487, 1493
FriOI	GRGCYC	1 cut(s)	262
FseI	GGCCGGCC	1 cut(s)	1158
Fsp4HI	GCNGC	8 cut(s)	71, 93, 96, 99, 209, 281, 594, 1485
FspBI	CTAG	1 cut(s)	35
GlaI	GCGC	3 cut(s)	69, 274, 541
GluI	GCNGC	8 cut(s)	71, 93, 96, 99, 209, 281, 594, 1485
GsaI	CCCAGC	2 cut(s)	593, 1153
HaeII	RGCGCY	1 cut(s)	543
HaeIII	GGCC	2 cut(s)	1154, 1158
HapII	CCGG	4 cut(s)	810, 1155, 1295, 1465
HgaI	GACGC	1 cut(s)	956
HhaI	GCGC	3 cut(s)	70, 275, 542
Hin1I	GRCGYC	1 cut(s)	825
Hin1II	CATG	9 cut(s)	185, 279, 344, 410, 800, 1163, 1210, 1427, 1457
Hin6I	GCGC	3 cut(s)	68, 273, 540
HinP1I	GCGC	3 cut(s)	68, 273, 540
HincII	GTYRAC	3 cut(s)	835, 919, 1450
HindII	GTYRAC	3 cut(s)	835, 919, 1450
HindIII	AAGCTT	1 cut(s)	1286
HinfI	GANTC	5 cut(s)	25, 1301, 1321, 1350, 1468
HpaI	GTTAAC	1 cut(s)	1450
HpaII	CCGG	4 cut(s)	810, 1155, 1295, 1465
HphI	GGTGA	4 cut(s)	20, 229, 466, 1039
Hpy166II	GTNNAC	6 cut(s)	835, 919, 1212, 1300, 1415, 1450
Hpy188I	TCNGA	5 cut(s)	205, 607, 727, 1349, 1374
Hpy188III	TCNNGA	9 cut(s)	84, 299, 326, 764, 884, 1250, 1271, 1465, 1472
Hpy8I	GTNNAC	6 cut(s)	835, 919, 1212, 1300, 1415, 1450
Hpy99I	CGWCG	1 cut(s)	839
HpyAV	CCTTC	6 cut(s)	7, 453, 689, 739, 961, 1303
HpyCH4III	ACNGT	2 cut(s)	832, 1192
HpyCH4IV	ACGT	2 cut(s)	5, 825
HpyF10VI	GCNNNNNNNGC	6 cut(s)	70, 98, 214, 425, 1026, 1155
HpyF3I	CTNAG	4 cut(s)	515, 711, 1303, 1371
HpySE526I	ACGT	2 cut(s)	5, 825
Hsp92I	GRCGYC	1 cut(s)	825
Hsp92II	CATG	9 cut(s)	185, 279, 344, 410, 800, 1163, 1210, 1427, 1457
HspAI	GCGC	3 cut(s)	68, 273, 540
Kpn2I	TCCGGA	1 cut(s)	1464
KroI	GCCGGC	1 cut(s)	1154
KroNI	GCCGGC	1 cut(s)	1156
KspAI	GTTAAC	1 cut(s)	1450
Kzo9I	GATC	4 cut(s)	505, 786, 867, 880
LguI	GCTCTTC	1 cut(s)	54
LmnI	GCTCC	3 cut(s)	109, 205, 214
Lsp1109I	GCAGC	7 cut(s)	104, 107, 110, 195, 292, 580, 1471
LweI	GCATC	3 cut(s)	1131, 1357, 1471
MaeI	CTAG	1 cut(s)	35
MaeII	ACGT	2 cut(s)	5, 825
MaeIII	GTNAC	7 cut(s)	26, 307, 434, 826, 955, 1045, 1084
MalI	GATC	4 cut(s)	507, 788, 869, 882
MboI	GATC	4 cut(s)	505, 786, 867, 880
MflI	RGATCY	1 cut(s)	880
MhlI	GDGCHC	2 cut(s)	262, 360
MluCI	AATT	8 cut(s)	75, 470, 598, 719, 996, 1179, 1240, 1253
MlyI	GAGTC	2 cut(s)	34, 1295
Mph1103I	ATGCAT	1 cut(s)	199
MroI	TCCGGA	1 cut(s)	1464
MroNI	GCCGGC	1 cut(s)	1154
MseI	TTAA	3 cut(s)	224, 630, 1449
MslI	CAYNNNNRTG	5 cut(s)	499, 801, 1164, 1385, 1428
MspA1I	CMGCKG	1 cut(s)	593
MspI	CCGG	4 cut(s)	810, 1155, 1295, 1465
MspR9I	CCNGG	3 cut(s)	533, 1023, 1331
Mva1269I	GAATGC	1 cut(s)	197
MvaI	CCWGG	3 cut(s)	533, 1023, 1331
MvnI	CGCG	1 cut(s)	70
MwoI	GCNNNNNNNGC	6 cut(s)	70, 98, 214, 425, 1026, 1155
NaeI	GCCGGC	1 cut(s)	1156
NdeII	GATC	4 cut(s)	505, 786, 867, 880
NgoMIV	GCCGGC	1 cut(s)	1154
NlaIII	CATG	9 cut(s)	185, 279, 344, 410, 800, 1163, 1210, 1427, 1457
NlaIV	GGNNCC	5 cut(s)	190, 528, 882, 972, 1507
NmuCI	GTSAC	5 cut(s)	26, 307, 434, 826, 1045
NsiI	ATGCAT	1 cut(s)	199
NspI	RCATGY	5 cut(s)	185, 410, 800, 1210, 1427
PasI	CCCWGGG	1 cut(s)	1330
PciI	ACATGT	1 cut(s)	1206
PciSI	GCTCTTC	1 cut(s)	54
PcsI	WCGNNNNNNNCGW	1 cut(s)	831
PctI	GAATGC	1 cut(s)	197
PdiI	GCCGGC	1 cut(s)	1156
PfeI	GAWTC	3 cut(s)	1321, 1350, 1468
PflFI	GACNNNGTC	1 cut(s)	305
PflMI	CCANNNNNTGG	1 cut(s)	1000
PkrI	GCNGC	8 cut(s)	72, 94, 97, 100, 210, 282, 595, 1486
PleI	GAGTC	2 cut(s)	33, 1295
PpsI	GAGTC	2 cut(s)	33, 1295
PscI	ACATGT	1 cut(s)	1206
Psp6I	CCWGG	3 cut(s)	531, 1021, 1329
PspEI	GGTNACC	1 cut(s)	1045
PspFI	CCCAGC	2 cut(s)	589, 1149
PspGI	CCWGG	3 cut(s)	531, 1021, 1329
PspN4I	GGNNCC	5 cut(s)	190, 528, 882, 972, 1507
PspPI	GGNCC	4 cut(s)	188, 1152, 1247, 1292
PstNI	CAGNNNCTG	1 cut(s)	1190
PsuI	RGATCY	1 cut(s)	880
PsyI	GACNNNGTC	1 cut(s)	305
PvuII	CAGCTG	1 cut(s)	593
RigI	GGCCGGCC	1 cut(s)	1158
RsaI	GTAC	1 cut(s)	1422
RsaNI	GTAC	1 cut(s)	1421
RseI	CAYNNNNRTG	5 cut(s)	499, 801, 1164, 1385, 1428
SalI	GTCGAC	1 cut(s)	833
SapI	GCTCTTC	1 cut(s)	54
SaqAI	TTAA	3 cut(s)	224, 630, 1449
SatI	GCNGC	8 cut(s)	71, 93, 96, 99, 209, 281, 594, 1485
Sau3AI	GATC	4 cut(s)	505, 786, 867, 880
Sau96I	GGNCC	4 cut(s)	188, 1152, 1247, 1292
SchI	GAGTC	2 cut(s)	34, 1295
ScrFI	CCNGG	3 cut(s)	533, 1023, 1331
SduI	GDGCHC	2 cut(s)	262, 360
SfaNI	GCATC	3 cut(s)	1131, 1357, 1471
SinI	GGWCC	3 cut(s)	188, 1247, 1292
SmiMI	CAYNNNNRTG	5 cut(s)	499, 801, 1164, 1385, 1428
SmlI	CTYRAG	1 cut(s)	261
SmoI	CTYRAG	1 cut(s)	261
Sse9I	AATT	8 cut(s)	75, 470, 598, 719, 996, 1179, 1240, 1253
SsiI	CCGC	6 cut(s)	70, 211, 351, 615, 1262, 1410
SspMI	CTAG	1 cut(s)	35
StyD4I	CCNGG	3 cut(s)	531, 1021, 1329
TaaI	ACNGT	2 cut(s)	832, 1192
TaiI	ACGT	2 cut(s)	8, 828
TaqI	TCGA	2 cut(s)	390, 834
TaqII	GACCGA	1 cut(s)	1033
TasI	AATT	8 cut(s)	75, 470, 598, 719, 996, 1179, 1240, 1253
TatI	WGTACW	1 cut(s)	1420
TauI	GCSGC	1 cut(s)	73
TfiI	GAWTC	3 cut(s)	1321, 1350, 1468
Tru1I	TTAA	3 cut(s)	224, 630, 1449
Tru9I	TTAA	3 cut(s)	224, 630, 1449
TscAI	CASTG	4 cut(s)	316, 360, 691, 1311
TseFI	GTSAC	5 cut(s)	26, 307, 434, 826, 1045
TseI	GCWGC	7 cut(s)	92, 95, 98, 208, 280, 593, 1484
Tsp45I	GTSAC	5 cut(s)	26, 307, 434, 826, 1045
TspDTI	ATGAA	5 cut(s)	68, 148, 980, 1251, 1406
TspGWI	ACGGA	1 cut(s)	1020
TspRI	CASTG	4 cut(s)	316, 360, 691, 1311
Tth111I	GACNNNGTC	1 cut(s)	305
Van91I	CCANNNNNTGG	1 cut(s)	1000
VpaK11BI	GGWCC	3 cut(s)	188, 1247, 1292
XapI	RAATTY	4 cut(s)	75, 470, 996, 1240
XceI	RCATGY	5 cut(s)	185, 410, 800, 1210, 1427
XmiI	GTMKAC	2 cut(s)	834, 1414
XspI	CTAG	1 cut(s)	35
ZraI	GACGTC	1 cut(s)	826
Zsp2I	ATGCAT	1 cut(s)	199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.