Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0010500

Physical Location & Seq

Genomic Coordinates Forward (+)

24573815 .. 24578738

Gene Structure 4924 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g24240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGGTAGAAGGGCTTTGGACCTCCACGGGTCAGGTCCCCAAAGTTTCCCGTTCCTTTTTCCGATCAGTTTATTATTACACACCATTAGATTTACAATTTGGTCTGTTAGTCGGAGTCGCAGGCAAACGATGGCGTTGGAGGAGGGCTCGCAGAATCACCAGCTAGAAGAAGAAGAGCAAGCGCAGAAAATTCAATCGGGAGTTGGAGTTGCAGCAGCAGCAGGAGGTTGGGAGCAGAAAAGATTGGGGATGGAAGAAGAGTTGAGTGAAGTAGGATGGTTCATTCTGGGCGAAAATCAACAGCATGTTGGTCCCTACGCATTCTCGGAGCTGCGGGAGCATTTCTCAAATGGTTACCTCACCCTCCATACGCTCGTCTGGGCTCAAGGAAGATGCGCATGGCAGCCACTCTCCTCCATTCCCGACCTCGTCACTGCAATATCTCACCACGACCAAGTACCTCATGTTTCAACCGCAGTGCCCCCAATCCCAACTTATGATGAGGAAGACTTTGACAAATGGCAGAAGCAGGTTAGTGAGACAGAACAAGCAGATAGTGACAGACCTTCCATGCCCCCGGAGGGTGAGGAAGAATTTACCGATGATGATGGGACTACATACAAGTGGGATCGGGGTCTTAGGGCCTGGGTTCCTCAGGATAGCGCTTTCGGAGTAGAAGATATGACATTTTTGCAAGAAGAGGAGGTTTTCCCTGCTGCCAATATTTCTGAGGCCACCGCAAGGGAAGAGGTTAATGCACCTGTAAAGGCTTCTGATCCCTCCAAAGAAGATGATATCAATGGTAGAAGTGAGTTAGAAGGCAATCAAAGTTCTAAGAGGAAATTGTTGGATACGGAAGCTGACAAGAAGGAAGCTAATAAACCTCCTGATAGTTGGTTTGAGCTGAAGATCAACACACATGTTTATGTAACCGGATTGCCTGATGACGCCACAGTCGACGAAGTGGTAGAGGTCTTTTCCAAATGTGGGATTATAAAGGAGGATCCTGAAACAAAAAAGCCTCGTGTGAAGTTGTACGTTGACAAAGAGACTGGAAAGACAAAGGGAGACGCACTTGTTACATATATGAAGGAACCATCGGTTGTTTTGGCTACCCAAATTTTGGATGGAACACCTCTACGCCCTGGTGGCAAGGTTTTTATGTCAGTCACCCAAGCTAAGTTTCAGCAGAAAGGGGACACATTTGTTGCCAAACAAGCAGACAACAAGAGGAAAAAGAAACTGAAGAAGGTGGAAGAGAAGATGCTTGGCTGGGCCGGCCGTGACAATGAAAAGGTGTCAATTCCAGCTACTGTTGTTCTTCGCTACATGTTCACTCCTGCTGAAATGAGGGCAGATGAAAATTTAGGTCCAGAATTACAGGCAGACGTTCAAGAGGAATGTGCGAAGCTTGGTCCAGTGGACTCAGTGAAGGTTTGTGAGAATCATCCCCAGGGAGTTATTTTGGTCAGATTCAAGGATAGGAATGATGCTCAAAAGTGCATAGAAATGATGAATGGGAGATGGTTTGGCGGTAGGCAAATACGTGCAAGTGAGGATGATGGTTTAGTTAACCATGCTTCTGTCCGGAATCTGGATGAGGATGCTGCACGGTTAGAGCAGTTTGGCGCCGAACTTGAAGCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4339 RRM_1

Protein Analysis

550

Amino Acids

61.57

Weight (kDa)

4.93

Isoelectric Point (pI)

50.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_2	PF14237	93 - 143	1.3e-14	GYF domain 2
RRM_1	PF00076	308 - 379	6.4e-06	RNA recognition motif
RRM_1	PF00076	462 - 516	3.2e-09	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16260
fragaria_vesca	FvH4_6g00060
malus_domestica	MD00G1017100.v1.1 MD12G1261400.v1.1
prunus_persica	Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1
pyrus_communis	pycom02g06260 pycom04g22010 pycom04g22020 pycom12g24240
rosa_chinensis	RchiOBHm_Chr3g0447391
rosa_laevigata	RLG00000026003
rosa_multiflora	Rmu_ssc0000473.1_g000016
rosa_roxburghii	Rroxscaffold_6G00425590
rosa_rugosa	Rorug02G0601100
rosa_samantha	Rh3AG001200 Rh3BG000900 Rh3CG000900 Rh3DG001100
rosa_wichuraiana	Rw3G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	995
AasI	GACNNNNNNGTC	1 cut(s)	953
Acc16I	TGCGCA	1 cut(s)	397
Acc36I	ACCTGC	1 cut(s)	520
AccB1I	GGYRCC	1 cut(s)	1628
AccB7I	CCANNNNNTGG	1 cut(s)	1123
AccI	GTMKAC	1 cut(s)	957
AccIII	TCCGGA	1 cut(s)	1587
AciI	CCGC	4 cut(s)	334, 474, 738, 1533
AclWI	GGATC	4 cut(s)	636, 770, 998, 1011
AcoI	YGGCCR	1 cut(s)	1279
AcsI	RAATTY	4 cut(s)	189, 593, 1119, 1363
AcuI	CTGAAG	2 cut(s)	926, 1265
AcyI	GRCGYC	2 cut(s)	948, 1629
AfaI	GTAC	2 cut(s)	459, 1037
AfeI	AGCGCT	1 cut(s)	664
AfiI	CCNNNNNNNGG	5 cut(s)	581, 741, 987, 1123, 1594
AflIII	ACRYGT	2 cut(s)	919, 1329
AgsI	TTSAA	5 cut(s)	194, 471, 1394, 1477, 1640
AjnI	CCWGG	3 cut(s)	644, 1144, 1452
AjuI	GAANNNNNNNTTGG	2 cut(s)	1167, 1199
AluBI	AGCT	9 cut(s)	163, 331, 860, 875, 904, 1178, 1310, 1411, 1643
AluI	AGCT	9 cut(s)	163, 331, 860, 875, 904, 1178, 1310, 1411, 1643
Alw26I	GTCTC	3 cut(s)	533, 1043, 1062
AlwI	GGATC	4 cut(s)	636, 770, 998, 1011
AlwNI	CAGNNNCTG	1 cut(s)	1313
Aor13HI	TCCGGA	1 cut(s)	1587
Aor51HI	AGCGCT	1 cut(s)	664
AoxI	GGCC	4 cut(s)	642, 732, 1275, 1279
ApeKI	GCWGC	7 cut(s)	212, 215, 218, 331, 403, 716, 1607
ApoI	RAATTY	4 cut(s)	189, 593, 1119, 1363
AspLEI	GCGC	4 cut(s)	184, 398, 665, 1631
AspS9I	GGNCC	7 cut(s)	19, 35, 311, 642, 1275, 1370, 1415
AsuC2I	CCSGG	1 cut(s)	578
AsuHPI	GGTGA	5 cut(s)	149, 352, 437, 596, 1162
AvaII	GGWCC	5 cut(s)	19, 35, 311, 1370, 1415
AxyI	CCTNAGG	1 cut(s)	654
BaeGI	GKGCMC	1 cut(s)	483
BamHI	GGATCC	1 cut(s)	1003
BanI	GGYRCC	1 cut(s)	1628
BanII	GRGCYC	2 cut(s)	149, 385
BauI	CACGAG	1 cut(s)	1023
BbsI	GAAGAC	1 cut(s)	513
BbvI	GCAGC	7 cut(s)	224, 227, 230, 318, 415, 703, 1594
BccI	CCATC	8 cut(s)	124, 244, 270, 602, 1105, 1121, 1518, 1556
BceAI	ACGGC	1 cut(s)	1266
BciT130I	CCWGG	3 cut(s)	646, 1146, 1454
BciVI	GTATCC	1 cut(s)	844
BcnI	CCSGG	1 cut(s)	578
BcoDI	GTCTC	3 cut(s)	533, 1043, 1062
BfaI	CTAG	1 cut(s)	164
BfoI	RGCGCY	2 cut(s)	666, 1632
BfuAI	ACCTGC	1 cut(s)	520
BfuI	GTATCC	1 cut(s)	844
BglI	GCCNNNNNGGC	1 cut(s)	1149
BisI	GCNGC	7 cut(s)	213, 216, 219, 332, 404, 717, 1608
BlsI	GCNGC	7 cut(s)	214, 217, 220, 333, 405, 718, 1609
Bme1390I	CCNGG	4 cut(s)	578, 646, 1146, 1454
Bme18I	GGWCC	5 cut(s)	19, 35, 311, 1370, 1415
BmgT120I	GGNCC	7 cut(s)	19, 35, 311, 642, 1275, 1370, 1415
BmiI	GGNNCC	6 cut(s)	37, 313, 651, 1005, 1095, 1630
BmrFI	CCNGG	4 cut(s)	578, 646, 1146, 1454
BmsI	GCATC	4 cut(s)	383, 1254, 1480, 1594
BpiI	GAAGAC	1 cut(s)	513
BplI	GAGNNNNNCTC	4 cut(s)	131, 163, 329, 361
BpuEI	CTTGAG	1 cut(s)	369
BpuMI	CCSGG	1 cut(s)	578
BsaAI	YACGTR	1 cut(s)	1547
BsaHI	GRCGYC	2 cut(s)	948, 1629
BsaJI	CCNNGG	6 cut(s)	25, 576, 645, 1144, 1452, 1453
BsaWI	WCCGGW	2 cut(s)	932, 1587
BsaXI	ACNNNNNCTCC	2 cut(s)	192, 222
Bsc4I	CCNNNNNNNGG	5 cut(s)	581, 741, 987, 1123, 1594
Bse118I	RCCGGY	1 cut(s)	1277
Bse1I	ACTGG	2 cut(s)	1057, 1418
Bse21I	CCTNAGG	1 cut(s)	654
BseAI	TCCGGA	1 cut(s)	1587
BseBI	CCWGG	3 cut(s)	646, 1146, 1454
BseDI	CCNNGG	6 cut(s)	25, 576, 645, 1144, 1452, 1453
BseGI	GGATG	7 cut(s)	255, 281, 1132, 1447, 1564, 1603, 1609
BseLI	CCNNNNNNNGG	5 cut(s)	581, 741, 987, 1123, 1594
BseMII	CTCAG	3 cut(s)	668, 720, 1440
BseNI	ACTGG	2 cut(s)	1057, 1418
BseRI	GAGGAG	3 cut(s)	155, 403, 716
BseSI	GKGCMC	1 cut(s)	483
BseX3I	CGGCCG	1 cut(s)	1279
BseXI	GCAGC	7 cut(s)	224, 227, 230, 318, 415, 703, 1594
BseYI	CCCAGC	1 cut(s)	1272
BsgI	GTGCAG	1 cut(s)	1593
Bsh1285I	CGRYCG	1 cut(s)	1282
BshFI	GGCC	4 cut(s)	644, 734, 1277, 1281
BshNI	GGYRCC	1 cut(s)	1628
BsiEI	CGRYCG	1 cut(s)	1282
BsiSI	CCGG	4 cut(s)	578, 933, 1278, 1588
BslFI	GGGAC	4 cut(s)	21, 297, 625, 1211
BslI	CCNNNNNNNGG	5 cut(s)	581, 741, 987, 1123, 1594
BsmAI	GTCTC	3 cut(s)	533, 1043, 1062
BsmBI	CGTCTC	1 cut(s)	1062
BsmFI	GGGAC	4 cut(s)	21, 297, 625, 1211
BsmI	GAATGC	1 cut(s)	320
BsnI	GGCC	4 cut(s)	644, 734, 1277, 1281
Bsp1286I	GDGCHC	3 cut(s)	149, 385, 483
Bsp13I	TCCGGA	1 cut(s)	1587
Bsp143I	GATC	5 cut(s)	63, 628, 775, 909, 1003
BspACI	CCGC	4 cut(s)	334, 474, 738, 1533
BspANI	GGCC	4 cut(s)	644, 734, 1277, 1281
BspCNI	CTCAG	3 cut(s)	667, 721, 1439
BspEI	TCCGGA	1 cut(s)	1587
BspLI	GGNNCC	6 cut(s)	37, 313, 651, 1005, 1095, 1630
BspMI	ACCTGC	1 cut(s)	520
BspPI	GGATC	4 cut(s)	636, 770, 998, 1011
BspQI	GCTCTTC	1 cut(s)	168
BspT107I	GGYRCC	1 cut(s)	1628
BsrFI	RCCGGY	1 cut(s)	1277
BsrI	ACTGG	2 cut(s)	1057, 1418
BssAI	RCCGGY	1 cut(s)	1277
BssECI	CCNNGG	6 cut(s)	25, 576, 645, 1144, 1452, 1453
BssMI	GATC	5 cut(s)	63, 628, 775, 909, 1003
BssNI	GRCGYC	2 cut(s)	948, 1629
BssSI	CACGAG	1 cut(s)	1023
Bst2BI	CACGAG	1 cut(s)	1023
Bst2UI	CCWGG	3 cut(s)	646, 1146, 1454
Bst4CI	ACNGT	3 cut(s)	955, 1315, 1614
Bst6I	CTCTTC	5 cut(s)	168, 252, 693, 741, 1251
BstACI	GRCGYC	2 cut(s)	948, 1629
BstBAI	YACGTR	1 cut(s)	1547
BstC8I	GCNNGC	4 cut(s)	122, 149, 180, 1279
BstDEI	CTNAG	6 cut(s)	638, 654, 729, 834, 1179, 1426
BstDSI	CCRYGG	1 cut(s)	25
BstEII	GGTNACC	1 cut(s)	353
BstF5I	GGATG	7 cut(s)	255, 281, 1132, 1447, 1564, 1603, 1609
BstH2I	RGCGCY	2 cut(s)	666, 1632
BstHHI	GCGC	4 cut(s)	184, 398, 665, 1631
BstKTI	GATC	5 cut(s)	66, 631, 778, 912, 1006
BstMAI	GTCTC	3 cut(s)	533, 1043, 1062
BstMBI	GATC	5 cut(s)	63, 628, 775, 909, 1003
BstMCI	CGRYCG	1 cut(s)	1282
BstMWI	GCNNNNNNNGC	5 cut(s)	218, 337, 1149, 1217, 1278
BstNI	CCWGG	3 cut(s)	646, 1146, 1454
BstNSI	RCATGY	3 cut(s)	308, 923, 1333
BstPI	GGTNACC	1 cut(s)	353
BstSCI	CCNGG	4 cut(s)	576, 644, 1144, 1452
BstSLI	GKGCMC	1 cut(s)	483
BstV1I	GCAGC	7 cut(s)	224, 227, 230, 318, 415, 703, 1594
BstV2I	GAAGAC	1 cut(s)	513
BstX2I	RGATCY	1 cut(s)	1003
BstYI	RGATCY	1 cut(s)	1003
BstZI	CGGCCG	1 cut(s)	1279
Bsu36I	CCTNAGG	1 cut(s)	654
BsuI	GTATCC	1 cut(s)	844
BsuRI	GGCC	4 cut(s)	644, 734, 1277, 1281
BtgI	CCRYGG	1 cut(s)	25
BtsCI	GGATG	7 cut(s)	255, 281, 1132, 1447, 1564, 1603, 1609
BtsI	GCAGTG	2 cut(s)	432, 483
BtsIMutI	CAGTG	4 cut(s)	432, 483, 1425, 1434
BveI	ACCTGC	1 cut(s)	520
Cac8I	GCNNGC	4 cut(s)	122, 149, 180, 1279
CaiI	CAGNNNCTG	1 cut(s)	1313
CfoI	GCGC	4 cut(s)	184, 398, 665, 1631
Cfr10I	RCCGGY	1 cut(s)	1277
Cfr13I	GGNCC	7 cut(s)	19, 35, 311, 642, 1275, 1370, 1415
CseI	GACGC	2 cut(s)	956, 1079
Csp6I	GTAC	2 cut(s)	458, 1036
CviAII	CATG	7 cut(s)	305, 399, 464, 571, 920, 1330, 1577
CviQI	GTAC	2 cut(s)	458, 1036
DdeI	CTNAG	6 cut(s)	638, 654, 729, 834, 1179, 1426
DinI	GGCGCC	1 cut(s)	1630
DpnI	GATC	5 cut(s)	65, 630, 777, 911, 1005
DpnII	GATC	5 cut(s)	63, 628, 775, 909, 1003
DrdI	GACNNNNNNGTC	1 cut(s)	953
DseDI	GACNNNNNNGTC	1 cut(s)	953
EaeI	YGGCCR	1 cut(s)	1279
EagI	CGGCCG	1 cut(s)	1279
Eam1104I	CTCTTC	5 cut(s)	168, 252, 693, 741, 1251
EarI	CTCTTC	5 cut(s)	168, 252, 693, 741, 1251
EclXI	CGGCCG	1 cut(s)	1279
Eco24I	GRGCYC	2 cut(s)	149, 385
Eco32I	GATATC	1 cut(s)	796
Eco47I	GGWCC	5 cut(s)	19, 35, 311, 1370, 1415
Eco47III	AGCGCT	1 cut(s)	664
Eco52I	CGGCCG	1 cut(s)	1279
Eco57I	CTGAAG	2 cut(s)	926, 1265
Eco81I	CCTNAGG	1 cut(s)	654
Eco91I	GGTNACC	1 cut(s)	353
EcoO109I	RGGNCCY	2 cut(s)	35, 642
EcoO65I	GGTNACC	1 cut(s)	353
EcoRII	CCWGG	3 cut(s)	644, 1144, 1452
EcoRV	GATATC	1 cut(s)	796
EcoT38I	GRGCYC	2 cut(s)	149, 385
EgeI	GGCGCC	1 cut(s)	1630
EheI	GGCGCC	1 cut(s)	1630
Esp3I	CGTCTC	1 cut(s)	1062
FaeI	CATG	7 cut(s)	308, 402, 467, 574, 923, 1333, 1580
FaqI	GGGAC	4 cut(s)	21, 297, 625, 1211
FatI	CATG	7 cut(s)	304, 398, 463, 570, 919, 1329, 1576
FauI	CCCGC	1 cut(s)	327
FblI	GTMKAC	1 cut(s)	957
Fnu4HI	GCNGC	7 cut(s)	213, 216, 219, 332, 404, 717, 1608
FokI	GGATG	7 cut(s)	262, 288, 1139, 1434, 1571, 1610, 1616
FriOI	GRGCYC	2 cut(s)	149, 385
FseI	GGCCGGCC	1 cut(s)	1281
Fsp4HI	GCNGC	7 cut(s)	213, 216, 219, 332, 404, 717, 1608
FspAI	RTGCGCAY	1 cut(s)	397
FspBI	CTAG	1 cut(s)	164
FspI	TGCGCA	1 cut(s)	397
GlaI	GCGC	4 cut(s)	183, 397, 664, 1630
GluI	GCNGC	7 cut(s)	213, 216, 219, 332, 404, 717, 1608
GsaI	CCCAGC	1 cut(s)	1276
HaeII	RGCGCY	2 cut(s)	666, 1632
HaeIII	GGCC	4 cut(s)	644, 734, 1277, 1281
HapII	CCGG	4 cut(s)	578, 933, 1278, 1588
HgaI	GACGC	2 cut(s)	956, 1079
HhaI	GCGC	4 cut(s)	184, 398, 665, 1631
Hin1I	GRCGYC	2 cut(s)	948, 1629
Hin1II	CATG	7 cut(s)	308, 402, 467, 574, 923, 1333, 1580
Hin6I	GCGC	4 cut(s)	182, 396, 663, 1629
HinP1I	GCGC	4 cut(s)	182, 396, 663, 1629
HincII	GTYRAC	3 cut(s)	958, 1042, 1573
HindII	GTYRAC	3 cut(s)	958, 1042, 1573
HindIII	AAGCTT	1 cut(s)	1409
HinfI	GANTC	6 cut(s)	115, 154, 1424, 1444, 1473, 1591
HpaI	GTTAAC	1 cut(s)	1573
HpaII	CCGG	4 cut(s)	578, 933, 1278, 1588
HphI	GGTGA	5 cut(s)	149, 352, 437, 596, 1162
Hpy166II	GTNNAC	5 cut(s)	958, 1042, 1335, 1423, 1573
Hpy188I	TCNGA	7 cut(s)	63, 114, 328, 671, 730, 775, 1472
Hpy188III	TCNNGA	9 cut(s)	198, 422, 656, 887, 1007, 1373, 1394, 1588, 1595
Hpy8I	GTNNAC	5 cut(s)	958, 1042, 1335, 1423, 1573
Hpy99I	CGWCG	1 cut(s)	962
HpyAV	CCTTC	7 cut(s)	3, 576, 812, 862, 1084, 1243, 1426
HpyCH4III	ACNGT	3 cut(s)	955, 1315, 1614
HpyCH4IV	ACGT	3 cut(s)	1038, 1389, 1546
HpyCH4V	TGCA	7 cut(s)	212, 437, 694, 758, 1503, 1550, 1610
HpyF10VI	GCNNNNNNNGC	5 cut(s)	218, 337, 1149, 1217, 1278
HpyF3I	CTNAG	6 cut(s)	638, 654, 729, 834, 1179, 1426
HpySE526I	ACGT	3 cut(s)	1038, 1389, 1546
Hsp92I	GRCGYC	2 cut(s)	948, 1629
Hsp92II	CATG	7 cut(s)	308, 402, 467, 574, 923, 1333, 1580
HspAI	GCGC	4 cut(s)	182, 396, 663, 1629
KasI	GGCGCC	1 cut(s)	1628
Kpn2I	TCCGGA	1 cut(s)	1587
KroI	GCCGGC	1 cut(s)	1277
KroNI	GCCGGC	1 cut(s)	1279
KspAI	GTTAAC	1 cut(s)	1573
Kzo9I	GATC	5 cut(s)	63, 628, 775, 909, 1003
LguI	GCTCTTC	1 cut(s)	168
LmnI	GCTCC	3 cut(s)	232, 328, 337
Lsp1109I	GCAGC	7 cut(s)	224, 227, 230, 318, 415, 703, 1594
LweI	GCATC	4 cut(s)	383, 1254, 1480, 1594
MaeI	CTAG	1 cut(s)	164
MaeII	ACGT	3 cut(s)	1038, 1389, 1546
MaeIII	GTNAC	7 cut(s)	353, 430, 557, 928, 1078, 1168, 1283
MalI	GATC	5 cut(s)	65, 630, 777, 911, 1005
MboI	GATC	5 cut(s)	63, 628, 775, 909, 1003
MflI	RGATCY	1 cut(s)	1003
MhlI	GDGCHC	3 cut(s)	149, 385, 483
MluCI	AATT	8 cut(s)	96, 189, 593, 842, 1119, 1302, 1363, 1376
Mly113I	GGCGCC	1 cut(s)	1629
MlyI	GAGTC	2 cut(s)	124, 1418
MmeI	TCCRAC	4 cut(s)	92, 117, 184, 828
MroI	TCCGGA	1 cut(s)	1587
MroNI	GCCGGC	1 cut(s)	1277
MseI	TTAA	2 cut(s)	753, 1572
MslI	CAYNNNNRTG	3 cut(s)	622, 924, 1508
MspI	CCGG	4 cut(s)	578, 933, 1278, 1588
MspR9I	CCNGG	4 cut(s)	578, 646, 1146, 1454
Mva1269I	GAATGC	1 cut(s)	320
MvaI	CCWGG	3 cut(s)	646, 1146, 1454
MwoI	GCNNNNNNNGC	5 cut(s)	218, 337, 1149, 1217, 1278
NaeI	GCCGGC	1 cut(s)	1279
NarI	GGCGCC	1 cut(s)	1629
NciI	CCSGG	1 cut(s)	578
NdeII	GATC	5 cut(s)	63, 628, 775, 909, 1003
NgoMIV	GCCGGC	1 cut(s)	1277
NlaIII	CATG	7 cut(s)	308, 402, 467, 574, 923, 1333, 1580
NlaIV	GGNNCC	6 cut(s)	37, 313, 651, 1005, 1095, 1630
NmuCI	GTSAC	4 cut(s)	430, 557, 1168, 1283
NsbI	TGCGCA	1 cut(s)	397
NspI	RCATGY	3 cut(s)	308, 923, 1333
PasI	CCCWGGG	1 cut(s)	1453
PciI	ACATGT	2 cut(s)	919, 1329
PciSI	GCTCTTC	1 cut(s)	168
PcsI	WCGNNNNNNNCGW	1 cut(s)	954
PctI	GAATGC	1 cut(s)	320
PdiI	GCCGGC	1 cut(s)	1279
PfeI	GAWTC	4 cut(s)	154, 1444, 1473, 1591
PflFI	GACNNNGTC	1 cut(s)	428
PflMI	CCANNNNNTGG	1 cut(s)	1123
PkrI	GCNGC	7 cut(s)	214, 217, 220, 333, 405, 718, 1609
PleI	GAGTC	2 cut(s)	123, 1418
PluTI	GGCGCC	1 cut(s)	1632
PpsI	GAGTC	2 cut(s)	123, 1418
Ppu21I	YACGTR	1 cut(s)	1547
PpuMI	RGGWCCY	1 cut(s)	35
PscI	ACATGT	2 cut(s)	919, 1329
PsiI	TTATAA	1 cut(s)	995
Psp5II	RGGWCCY	1 cut(s)	35
Psp6I	CCWGG	3 cut(s)	644, 1144, 1452
PspEI	GGTNACC	1 cut(s)	353
PspFI	CCCAGC	1 cut(s)	1272
PspGI	CCWGG	3 cut(s)	644, 1144, 1452
PspN4I	GGNNCC	6 cut(s)	37, 313, 651, 1005, 1095, 1630
PspPI	GGNCC	7 cut(s)	19, 35, 311, 642, 1275, 1370, 1415
PspPPI	RGGWCCY	1 cut(s)	35
PstNI	CAGNNNCTG	1 cut(s)	1313
PsuI	RGATCY	1 cut(s)	1003
PsyI	GACNNNGTC	1 cut(s)	428
RigI	GGCCGGCC	1 cut(s)	1281
RsaI	GTAC	2 cut(s)	459, 1037
RsaNI	GTAC	2 cut(s)	458, 1036
RseI	CAYNNNNRTG	3 cut(s)	622, 924, 1508
SalI	GTCGAC	1 cut(s)	956
SapI	GCTCTTC	1 cut(s)	168
SaqAI	TTAA	2 cut(s)	753, 1572
SatI	GCNGC	7 cut(s)	213, 216, 219, 332, 404, 717, 1608
Sau3AI	GATC	5 cut(s)	63, 628, 775, 909, 1003
Sau96I	GGNCC	7 cut(s)	19, 35, 311, 642, 1275, 1370, 1415
SchI	GAGTC	2 cut(s)	124, 1418
ScrFI	CCNGG	4 cut(s)	578, 646, 1146, 1454
SduI	GDGCHC	3 cut(s)	149, 385, 483
SfaNI	GCATC	4 cut(s)	383, 1254, 1480, 1594
SfoI	GGCGCC	1 cut(s)	1630
SinI	GGWCC	5 cut(s)	19, 35, 311, 1370, 1415
SmiMI	CAYNNNNRTG	3 cut(s)	622, 924, 1508
SmlI	CTYRAG	1 cut(s)	384
SmoI	CTYRAG	1 cut(s)	384
Sse9I	AATT	8 cut(s)	96, 189, 593, 842, 1119, 1302, 1363, 1376
SsiI	CCGC	4 cut(s)	334, 474, 738, 1533
SspDI	GGCGCC	1 cut(s)	1628
SspI	AATATT	1 cut(s)	724
SspMI	CTAG	1 cut(s)	164
StyD4I	CCNGG	4 cut(s)	576, 644, 1144, 1452
TaaI	ACNGT	3 cut(s)	955, 1315, 1614
TaiI	ACGT	3 cut(s)	1041, 1392, 1549
TaqI	TCGA	1 cut(s)	957
TasI	AATT	8 cut(s)	96, 189, 593, 842, 1119, 1302, 1363, 1376
TfiI	GAWTC	4 cut(s)	154, 1444, 1473, 1591
Tru1I	TTAA	2 cut(s)	753, 1572
Tru9I	TTAA	2 cut(s)	753, 1572
TscAI	CASTG	4 cut(s)	439, 483, 1425, 1434
TseFI	GTSAC	4 cut(s)	430, 557, 1168, 1283
TseI	GCWGC	7 cut(s)	212, 215, 218, 331, 403, 716, 1607
Tsp45I	GTSAC	4 cut(s)	430, 557, 1168, 1283
TspDTI	ATGAA	5 cut(s)	271, 1103, 1305, 1374, 1529
TspGWI	ACGGA	1 cut(s)	869
TspRI	CASTG	4 cut(s)	439, 483, 1425, 1434
Tth111I	GACNNNGTC	1 cut(s)	428
Van91I	CCANNNNNTGG	1 cut(s)	1123
VpaK11BI	GGWCC	5 cut(s)	19, 35, 311, 1370, 1415
XapI	RAATTY	4 cut(s)	189, 593, 1119, 1363
XceI	RCATGY	3 cut(s)	308, 923, 1333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1124
XmiI	GTMKAC	1 cut(s)	957
XspI	CTAG	1 cut(s)	164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.