Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0010500

Physical Location & Seq

Genomic Coordinates Reverse (-)

149456 .. 155803

Gene Structure 6348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G000060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGCGAGGTTCGCAGGGAACGGCTCGGAGAATCTCCGAGAAGAAGAAGAAGAAGAAGAAGGGAAACTGCAGCAATCAGGTAATTGTTTCGATTCCTCAGCTCAGGTGTTGGCTGTGATCTTTGCAGGTTCCGAACAGACAATATTGGAGATGGAAGCCAAAACCGAAATTTTGAGTGAAGGAGGATGGTTTATTCTCGGTGAAAATCAGCAACATCTTGGTCCCTACACATTTTCAGAGTTGCGCGAGCATTTCTTAAATGGCTACCTCACCCACTCTACGCTGGTCTGGTCACAAGGAAGAAGCGAATGGCAGCCACTGTCCTCAATTCCTAATTTGGTCACCCAACTTACTTGCCATGACCCAGTGCCCCCCAGTGGTAATGATGATGACTTTGAGAAATGGCAGAAGCAGATTTCTAAGGCAGAAGCAGATAGTGAAAGACCTTCAACACCGCCAGAGGGCGAGGAAGAGTTCATCGATGATGATGGCACTCAATATAAGTGGGATCGGGGTCTTAGGGCTTGGGTTCCTCAGGATAGCATGTTTGGGGTAGAGGAGATGACTTTCTTGCAAGAAGAGGAAGTCTTCATGAATGCCAAACTTTCTGACGACTCTTCAAGGGAGGAGGTTGATGCAACTGGAATTTTTTCTGATCCTTCTAAAGAAGAAGACACTGTTGTTAACTGTGAGGTAGAACAAGGGAATCCAAATTCAAAGAGAAAACTGTCGGATACGGAAGATGTGAAAAAGGAAGCTAATAAACCTCCTGATAGTTGGTTTGAGCTAAAGGTCAATTCACATGTTTATGTGACTGGATTACCCGATGATGTTACAGTTGACGAAGTGGTGGAGGTGTTTTCCAAGTGTGGGATAATAAAAGAGGATCCTGAATCAAAAAAGCCTCGTGTGAAGCTGTATACTGATAAAGCGACTGGAAAGAAAAAGGGAGATGCACTTGTTACATATTTGAAGGAGCCCTCAGTCGATTTGGCTCTCAAAATTTTGGATGGAACACCTCTCCGTCTTGGTAGCAAGGTTCTCATGTCAGTCACCCAAGCTAAGTTTGAGCAGAAAGGGGATAGATTTATTGCCAAACAAGCAGACAACAAGAGGAAAAAAAAACTGAAGAAGGTGGAAGAGAAGATGCTTGGCTGGGGTGGTCGTGATGATGCAAAACTGTTGATTCCAGCTACTGTTCTTCTTCGTTACATGTTCACTACTGCTGAAATGAGCGCAGATGAAAATTTACGTGCAGAATTGCAGGCAGATGTTGAGGAGGAATGTCAGAAGCTTGGTCCCGTGGACTCAGTCAAGGTTTGTGAGAATCATCCCCAGGGTGTTGTTTTGGTAAGATTCAAAGATAGGAAGGATGCTCAAAAGTGCATAGAGTTGATGAATGGAAGATGGTTTGGTGGTAGGCAGATACATGCAAGTGAGGATGATGGTTTAATTAACCATGCTTTGGTCCGGAATCTGGATGATGATGCTGAACGCTTAGAGCAGTTTGCTTCCGAACTTGATGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4339 RRM_1

Protein Analysis

509

Amino Acids

57.38

Weight (kDa)

4.7

Isoelectric Point (pI)

45.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF_2	PF14237	63 - 113	1.9e-16	GYF domain 2
RRM_1	PF00076	269 - 341	2.3e-07	RNA recognition motif
RRM_1	PF00076	423 - 477	3.6e-09	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16260
fragaria_vesca	FvH4_6g00060
malus_domestica	MD00G1017100.v1.1 MD12G1261400.v1.1
prunus_persica	Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1 Prupe.6G365400_v2.0.a1
pyrus_communis	pycom02g06260 pycom04g22010 pycom04g22020 pycom12g24240
rosa_chinensis	RchiOBHm_Chr3g0447391
rosa_laevigata	RLG00000026003
rosa_multiflora	Rmu_ssc0000473.1_g000016
rosa_roxburghii	Rroxscaffold_6G00425590
rosa_rugosa	Rorug02G0601100
rosa_samantha	Rh3AG001200 Rh3BG000900 Rh3CG000900 Rh3DG001100
rosa_wichuraiana	Rw3G000060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	116
AccB7I	CCANNNNNTGG	1 cut(s)	1465
AccI	GTMKAC	1 cut(s)	920
AccII	CGCG	1 cut(s)	246
AccIII	TCCGGA	1 cut(s)	1470
AciI	CCGC	1 cut(s)	455
AclWI	GGATC	4 cut(s)	516, 650, 881, 894
AcsI	RAATTY	5 cut(s)	168, 645, 712, 1002, 1246
AcuI	CTGAAG	1 cut(s)	1148
AfiI	CCNNNNNNNGG	5 cut(s)	377, 461, 870, 1465, 1477
AflIII	ACRYGT	2 cut(s)	802, 1212
AgsI	TTSAA	5 cut(s)	450, 621, 717, 973, 1360
AjnI	CCWGG	1 cut(s)	1335
AluBI	AGCT	7 cut(s)	101, 758, 787, 916, 1061, 1193, 1294
AluI	AGCT	7 cut(s)	101, 758, 787, 916, 1061, 1193, 1294
AlwI	GGATC	4 cut(s)	516, 650, 881, 894
AlwNI	CAGNNNCTG	2 cut(s)	319, 1196
Aor13HI	TCCGGA	1 cut(s)	1470
ApeKI	GCWGC	2 cut(s)	70, 313
ApoI	RAATTY	5 cut(s)	168, 645, 712, 1002, 1246
Asp700I	GAANNNNTTC	1 cut(s)	649
AspLEI	GCGC	2 cut(s)	246, 1238
AspS9I	GGNCC	3 cut(s)	221, 1298, 1468
AsuHPI	GGTGA	4 cut(s)	212, 262, 334, 1045
AvaII	GGWCC	3 cut(s)	221, 1298, 1468
AxyI	CCTNAGG	1 cut(s)	534
BaeGI	GKGCMC	1 cut(s)	372
BamHI	GGATCC	1 cut(s)	886
BanII	GRGCYC	1 cut(s)	981
BauI	CACGAG	1 cut(s)	906
BbsI	GAAGAC	2 cut(s)	580, 678
BbvCI	CCTCAGC	1 cut(s)	97
BbvI	GCAGC	2 cut(s)	82, 325
BccI	CCATC	6 cut(s)	145, 180, 482, 1004, 1401, 1439
BceAI	ACGGC	1 cut(s)	37
BciT130I	CCWGG	1 cut(s)	1337
BciVI	GTATCC	1 cut(s)	727
BfmI	CTRYAG	1 cut(s)	68
BfuAI	ACCTGC	1 cut(s)	116
BfuI	GTATCC	1 cut(s)	727
BisI	GCNGC	2 cut(s)	71, 314
BlsI	GCNGC	2 cut(s)	72, 315
Bme1390I	CCNGG	1 cut(s)	1337
Bme18I	GGWCC	3 cut(s)	221, 1298, 1468
BmgT120I	GGNCC	3 cut(s)	221, 1298, 1468
BmiI	GGNNCC	6 cut(s)	130, 223, 531, 888, 978, 1300
BmrFI	CCNGG	1 cut(s)	1337
BmrI	ACTGGG	2 cut(s)	359, 369
BmsI	GCATC	6 cut(s)	625, 943, 1137, 1162, 1363, 1477
BmuI	ACTGGG	2 cut(s)	359, 369
BpiI	GAAGAC	2 cut(s)	580, 678
Bpu10I	CCTNAGC	2 cut(s)	97, 102
Bsa29I	ATCGAT	1 cut(s)	480
BsaAI	YACGTR	1 cut(s)	1253
BsaJI	CCNNGG	3 cut(s)	1302, 1335, 1336
BsaWI	WCCGGW	1 cut(s)	1470
Bsc4I	CCNNNNNNNGG	5 cut(s)	377, 461, 870, 1465, 1477
Bse1I	ACTGG	5 cut(s)	365, 375, 646, 820, 940
Bse21I	CCTNAGG	1 cut(s)	534
BseAI	TCCGGA	1 cut(s)	1470
BseBI	CCWGG	1 cut(s)	1337
BseCI	ATCGAT	1 cut(s)	480
BseDI	CCNNGG	3 cut(s)	1302, 1335, 1336
BseGI	GGATG	6 cut(s)	191, 1015, 1330, 1378, 1447, 1486
BseLI	CCNNNNNNNGG	5 cut(s)	377, 461, 870, 1465, 1477
BseMII	CTCAG	5 cut(s)	111, 116, 548, 996, 1323
BseNI	ACTGG	5 cut(s)	365, 375, 646, 820, 940
BseRI	GAGGAG	3 cut(s)	572, 641, 1292
BseSI	GKGCMC	1 cut(s)	372
BseXI	GCAGC	2 cut(s)	82, 325
BseYI	CCCAGC	1 cut(s)	1155
BsgI	GTGCAG	1 cut(s)	1275
Bsh1236I	CGCG	1 cut(s)	246
BshVI	ATCGAT	1 cut(s)	480
BsiSI	CCGG	1 cut(s)	1471
BslFI	GGGAC	2 cut(s)	207, 1284
BslI	CCNNNNNNNGG	5 cut(s)	377, 461, 870, 1465, 1477
BsmFI	GGGAC	2 cut(s)	207, 1284
BsmI	GAATGC	1 cut(s)	601
Bsp1286I	GDGCHC	2 cut(s)	372, 981
Bsp13I	TCCGGA	1 cut(s)	1470
Bsp143I	GATC	4 cut(s)	117, 508, 655, 886
BspACI	CCGC	1 cut(s)	455
BspCNI	CTCAG	5 cut(s)	110, 115, 547, 995, 1322
BspDI	ATCGAT	1 cut(s)	480
BspEI	TCCGGA	1 cut(s)	1470
BspFNI	CGCG	1 cut(s)	246
BspHI	TCATGA	1 cut(s)	591
BspLI	GGNNCC	6 cut(s)	130, 223, 531, 888, 978, 1300
BspMAI	CTGCAG	1 cut(s)	72
BspMI	ACCTGC	1 cut(s)	116
BspPI	GGATC	4 cut(s)	516, 650, 881, 894
BsrI	ACTGG	5 cut(s)	365, 375, 646, 820, 940
BssECI	CCNNGG	3 cut(s)	1302, 1335, 1336
BssMI	GATC	4 cut(s)	117, 508, 655, 886
BssNAI	GTATAC	1 cut(s)	921
BssSI	CACGAG	1 cut(s)	906
Bst1107I	GTATAC	1 cut(s)	921
Bst2BI	CACGAG	1 cut(s)	906
Bst2UI	CCWGG	1 cut(s)	1337
Bst4CI	ACNGT	7 cut(s)	321, 679, 689, 729, 838, 1182, 1198
Bst6I	CTCTTC	4 cut(s)	465, 573, 622, 1134
BstBAI	YACGTR	1 cut(s)	1253
BstC8I	GCNNGC	2 cut(s)	248, 1266
BstDEI	CTNAG	9 cut(s)	97, 102, 420, 518, 534, 982, 1062, 1309, 1498
BstDSI	CCRYGG	1 cut(s)	1302
BstEII	GGTNACC	1 cut(s)	340
BstF5I	GGATG	6 cut(s)	191, 1015, 1330, 1378, 1447, 1486
BstFNI	CGCG	1 cut(s)	246
BstHHI	GCGC	2 cut(s)	246, 1238
BstKTI	GATC	4 cut(s)	120, 511, 658, 889
BstMBI	GATC	4 cut(s)	117, 508, 655, 886
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 1100
BstNI	CCWGG	1 cut(s)	1337
BstNSI	RCATGY	4 cut(s)	547, 806, 1216, 1433
BstPI	GGTNACC	1 cut(s)	340
BstSCI	CCNGG	1 cut(s)	1335
BstSFI	CTRYAG	1 cut(s)	68
BstSLI	GKGCMC	1 cut(s)	372
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	2 cut(s)	82, 325
BstV2I	GAAGAC	2 cut(s)	580, 678
BstX2I	RGATCY	1 cut(s)	886
BstYI	RGATCY	1 cut(s)	886
BstZ17I	GTATAC	1 cut(s)	921
Bsu15I	ATCGAT	1 cut(s)	480
Bsu36I	CCTNAGG	1 cut(s)	534
BsuI	GTATCC	1 cut(s)	727
BsuTUI	ATCGAT	1 cut(s)	480
BtgI	CCRYGG	1 cut(s)	1302
BtsCI	GGATG	6 cut(s)	191, 1015, 1330, 1378, 1447, 1486
BtsIMutI	CAGTG	4 cut(s)	317, 372, 382, 675
BveI	ACCTGC	1 cut(s)	116
Cac8I	GCNNGC	2 cut(s)	248, 1266
CaiI	CAGNNNCTG	2 cut(s)	319, 1196
CciI	TCATGA	1 cut(s)	591
CfoI	GCGC	2 cut(s)	246, 1238
Cfr13I	GGNCC	3 cut(s)	221, 1298, 1468
ClaI	ATCGAT	1 cut(s)	480
CspCI	CAANNNNNGTGG	2 cut(s)	485, 520
CviAII	CATG	8 cut(s)	359, 544, 592, 803, 1045, 1213, 1430, 1460
DdeI	CTNAG	9 cut(s)	97, 102, 420, 518, 534, 982, 1062, 1309, 1498
DpnI	GATC	4 cut(s)	119, 510, 657, 888
DpnII	GATC	4 cut(s)	117, 508, 655, 886
Eam1104I	CTCTTC	4 cut(s)	465, 573, 622, 1134
EarI	CTCTTC	4 cut(s)	465, 573, 622, 1134
Eco24I	GRGCYC	1 cut(s)	981
Eco47I	GGWCC	3 cut(s)	221, 1298, 1468
Eco57I	CTGAAG	1 cut(s)	1148
Eco81I	CCTNAGG	1 cut(s)	534
Eco91I	GGTNACC	1 cut(s)	340
EcoO65I	GGTNACC	1 cut(s)	340
EcoRII	CCWGG	1 cut(s)	1335
EcoT38I	GRGCYC	1 cut(s)	981
FaeI	CATG	8 cut(s)	362, 547, 595, 806, 1048, 1216, 1433, 1463
FaqI	GGGAC	2 cut(s)	207, 1284
FatI	CATG	8 cut(s)	358, 543, 591, 802, 1044, 1212, 1429, 1459
FblI	GTMKAC	1 cut(s)	920
Fnu4HI	GCNGC	2 cut(s)	71, 314
FokI	GGATG	6 cut(s)	198, 1022, 1317, 1385, 1454, 1493
FriOI	GRGCYC	1 cut(s)	981
Fsp4HI	GCNGC	2 cut(s)	71, 314
GlaI	GCGC	2 cut(s)	245, 1237
GluI	GCNGC	2 cut(s)	71, 314
GsaI	CCCAGC	1 cut(s)	1159
HapII	CCGG	1 cut(s)	1471
HhaI	GCGC	2 cut(s)	246, 1238
Hin1II	CATG	8 cut(s)	362, 547, 595, 806, 1048, 1216, 1433, 1463
Hin6I	GCGC	2 cut(s)	244, 1236
HinP1I	GCGC	2 cut(s)	244, 1236
HincII	GTYRAC	2 cut(s)	685, 841
HindII	GTYRAC	2 cut(s)	685, 841
HindIII	AAGCTT	1 cut(s)	1292
HpaI	GTTAAC	1 cut(s)	685
HpaII	CCGG	1 cut(s)	1471
HphI	GGTGA	4 cut(s)	212, 262, 334, 1045
Hpy166II	GTNNAC	5 cut(s)	685, 841, 921, 1218, 1306
Hpy188I	TCNGA	9 cut(s)	28, 38, 133, 238, 610, 655, 733, 1290, 1516
Hpy188III	TCNNGA	7 cut(s)	536, 592, 770, 890, 1166, 1471, 1478
Hpy8I	GTNNAC	5 cut(s)	685, 841, 921, 1218, 1306
HpyAV	CCTTC	7 cut(s)	53, 173, 456, 669, 967, 1126, 1363
HpyCH4III	ACNGT	7 cut(s)	321, 679, 689, 729, 838, 1182, 1198
HpyCH4IV	ACGT	1 cut(s)	1252
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 1100
HpyF3I	CTNAG	9 cut(s)	97, 102, 420, 518, 534, 982, 1062, 1309, 1498
HpySE526I	ACGT	1 cut(s)	1252
Hsp92II	CATG	8 cut(s)	362, 547, 595, 806, 1048, 1216, 1433, 1463
HspAI	GCGC	2 cut(s)	244, 1236
Kpn2I	TCCGGA	1 cut(s)	1470
KspAI	GTTAAC	1 cut(s)	685
Kzo9I	GATC	4 cut(s)	117, 508, 655, 886
LmnI	GCTCC	1 cut(s)	976
Lsp1109I	GCAGC	2 cut(s)	82, 325
LweI	GCATC	6 cut(s)	625, 943, 1137, 1162, 1363, 1477
MaeII	ACGT	1 cut(s)	1252
MaeIII	GTNAC	7 cut(s)	291, 340, 811, 832, 961, 1051, 1208
MalI	GATC	4 cut(s)	119, 510, 657, 888
MboI	GATC	4 cut(s)	117, 508, 655, 886
MflI	RGATCY	1 cut(s)	886
MhlI	GDGCHC	2 cut(s)	372, 981
MlyI	GAGTC	2 cut(s)	608, 1301
MmeI	TCCRAC	1 cut(s)	711
MroI	TCCGGA	1 cut(s)	1470
MroXI	GAANNNNTTC	1 cut(s)	649
MseI	TTAA	4 cut(s)	257, 684, 1451, 1455
MslI	CAYNNNNRTG	2 cut(s)	807, 1434
MspI	CCGG	1 cut(s)	1471
MspR9I	CCNGG	1 cut(s)	1337
Mva1269I	GAATGC	1 cut(s)	601
MvaI	CCWGG	1 cut(s)	1337
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	2 cut(s)	11, 1100
NdeII	GATC	4 cut(s)	117, 508, 655, 886
NlaIII	CATG	8 cut(s)	362, 547, 595, 806, 1048, 1216, 1433, 1463
NlaIV	GGNNCC	6 cut(s)	130, 223, 531, 888, 978, 1300
NmuCI	GTSAC	4 cut(s)	291, 340, 811, 1051
NspI	RCATGY	4 cut(s)	547, 806, 1216, 1433
PacI	TTAATTAA	1 cut(s)	1455
PagI	TCATGA	1 cut(s)	591
PasI	CCCWGGG	1 cut(s)	1336
PciI	ACATGT	2 cut(s)	802, 1212
PctI	GAATGC	1 cut(s)	601
PdmI	GAANNNNTTC	1 cut(s)	649
PfeI	GAWTC	8 cut(s)	31, 92, 706, 893, 1186, 1327, 1356, 1474
PflFI	GACNNNGTC	1 cut(s)	1310
PflMI	CCANNNNNTGG	1 cut(s)	1465
PkrI	GCNGC	2 cut(s)	72, 315
PleI	GAGTC	2 cut(s)	608, 1301
PpsI	GAGTC	2 cut(s)	608, 1301
Ppu21I	YACGTR	1 cut(s)	1253
PscI	ACATGT	2 cut(s)	802, 1212
Psp6I	CCWGG	1 cut(s)	1335
PspEI	GGTNACC	1 cut(s)	340
PspFI	CCCAGC	1 cut(s)	1155
PspGI	CCWGG	1 cut(s)	1335
PspN4I	GGNNCC	6 cut(s)	130, 223, 531, 888, 978, 1300
PspPI	GGNCC	3 cut(s)	221, 1298, 1468
PstI	CTGCAG	1 cut(s)	72
PstNI	CAGNNNCTG	2 cut(s)	319, 1196
PsuI	RGATCY	1 cut(s)	886
PsyI	GACNNNGTC	1 cut(s)	1310
RseI	CAYNNNNRTG	2 cut(s)	807, 1434
SaqAI	TTAA	4 cut(s)	257, 684, 1451, 1455
SatI	GCNGC	2 cut(s)	71, 314
Sau3AI	GATC	4 cut(s)	117, 508, 655, 886
Sau96I	GGNCC	3 cut(s)	221, 1298, 1468
SchI	GAGTC	2 cut(s)	608, 1301
ScrFI	CCNGG	1 cut(s)	1337
SduI	GDGCHC	2 cut(s)	372, 981
SfaNI	GCATC	6 cut(s)	625, 943, 1137, 1162, 1363, 1477
SfcI	CTRYAG	1 cut(s)	68
SinI	GGWCC	3 cut(s)	221, 1298, 1468
SmiMI	CAYNNNNRTG	2 cut(s)	807, 1434
SsiI	CCGC	1 cut(s)	455
SspI	AATATT	1 cut(s)	144
StyD4I	CCNGG	1 cut(s)	1335
TaaI	ACNGT	7 cut(s)	321, 679, 689, 729, 838, 1182, 1198
TaiI	ACGT	1 cut(s)	1255
TaqI	TCGA	3 cut(s)	90, 480, 987
TfiI	GAWTC	8 cut(s)	31, 92, 706, 893, 1186, 1327, 1356, 1474
Tru1I	TTAA	4 cut(s)	257, 684, 1451, 1455
Tru9I	TTAA	4 cut(s)	257, 684, 1451, 1455
TscAI	CASTG	4 cut(s)	324, 372, 382, 682
TseFI	GTSAC	4 cut(s)	291, 340, 811, 1051
TseI	GCWGC	2 cut(s)	70, 313
Tsp45I	GTSAC	4 cut(s)	291, 340, 811, 1051
TspDTI	ATGAA	5 cut(s)	466, 580, 608, 1257, 1412
TspGWI	ACGGA	2 cut(s)	752, 1013
TspRI	CASTG	4 cut(s)	324, 372, 382, 682
Tth111I	GACNNNGTC	1 cut(s)	1310
Van91I	CCANNNNNTGG	1 cut(s)	1465
VpaK11BI	GGWCC	3 cut(s)	221, 1298, 1468
XapI	RAATTY	5 cut(s)	168, 645, 712, 1002, 1246
XceI	RCATGY	4 cut(s)	547, 806, 1216, 1433
XmiI	GTMKAC	1 cut(s)	920
XmnI	GAANNNNTTC	1 cut(s)	649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.