Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009804

Physical Location & Seq

Genomic Coordinates Forward (+)

13596824 .. 13599269

Gene Structure 2446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G35390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGCCTCCCATGCAGGCGCGTACCCTCAGCGTATACAACGTCATGGTACCACTAGTATGTCTCCTCCTTTTCTTCTCCACACCCACTCATGGTCTTTCAGATTCTGAGGCTATCCTCAAGTTCAAGGAATCTTTAGTTGTTGGGCAGGAAAACGCGTTGGCCTCATGGAATGCTAAAAGTCCTCCTTGCACTTGGTCTGGTGTCTTGTGCAATGGCGGCTCCGTCTGGAGACTGCAGATGGAGAACTTGGAGCTTTCTGGTTCTATAGACATCGAGGCATTGTCGGGTTTGACATCCTTGAGGACTCTAAGCTTCATGAACAACAAGTTTGAAGGGCCATTCCCTGACTTCAAGAAACTCGCTGCTCTCAAGTCACTCTACCTGTCAAACAATCAATTCGGAGGAGATATACCAGGGGATGCTTTTGAAGGTATGGGGTGGTTGAAGAAGGTCCATTTGGCACAAAACAAGTTTACCGGTCAAATTCCGTCATCTGTGGCCAAATTGCCCAAGCTTTTAGAACTGAGACTTGACGGGAACCAATTCACTGGAGAGATACCAGAGTTTGAACATCAGCTACACTTGTTAAACCTTTCAAACAATGCATTAACAGGTCCAATACCAGAGAGTCTCAGCATGACAGATCCAAAGGTGTTTGAAGGTAACAAAGGCTTATATGGAAAACCGCTGGAAACAGAATGTGATTCTCCTTATATAGAACATCCTCCACAGTCTGAGGCACGACCCAAATCATCATCAAGGGGACCTCTCGTTATAACAGCAATAGTCGCGGCCTTGACAATACTCATAATCCTTGGAGTGATCTTCTTGCTTAACCGCAGCTATAAGAATAAAAAACCGCGTTTGGCGGTGGAAACCGGACCATCAAGTCTACAGAAGAAAACCGGCATCCGAGAAGCAGACCAAAGTCGTAGAGACAGAAAGAAAGCCGACCACCGGAAAGGCTCAGGCACTACTAAGAGGATGGGTGCAGCAGCTGGAGTGGAGAACACAAAGCTTTCATTCTTGAGGGAAGATAGGGAAAAATTTGACCTGCAAGATCTGTTGAAGGCTTCGGCCGAGATACTTGGAAGTGGATGTTTTGGAGCATCTTATAAAGCAGTGCTATCAAGCGGACAAATGATGGTCGTGAAGAGGTTCAAGCAGATGAACAATGCAGGGAGGGATGAGTTTCAAGAGCACATGAAAAGATTAGGGAGGTTAATGCACCATAATCTGCTTTCCATTGTGGCTTATTACTATAGGAAGGAGGAAAAGCTTTTAGTATGTGATTTTGCTGAGAGAGGAAGCTTGGCTATTAATCTTCATAGTAATCAATCGTTAGGAAAACCAAGTTTGGACTGGCCAACAAGATTGAAGATCGTGAAGGGAGTTGCAAAGGGGTTGTTCTATCTCCACCAAGACCTACCTAGCCTAATGGCTCCACATGGTCACCTCAAATCCTCCAACGTTCTTCTCACCAAAACATTTGAACCACTTCTCACAGACTATGGATTAATTCCGTTGATCAACCAAGAGAAGGCACAAATGCACATGGCGGCCTATAGATCTCCAGAGTATTTGCAACATCGACGTATCACCAAGAAAACCGATGTATGGGGGCTTGGCATACTTATCTTGGAGATCCTAACGGGAAAATTCCCGGCTAATTTCTCACAAAGTAGTGAAGAGGATTTAGCGAGTTGGGTGAACTCGGGTTTCCATGGGGTATGGGCACCAAGTTTGTTTGATAAGGGTATGGGGAAGACAAGCCATTGTGAAGGACAGATTCTCAAACTCTTGACGATCGGATTGAACTGTTGTGAACCCGACGTGGAGAAAAGGTTGGACATAGGACAGGCTGTGGAGAAGATCGAAGAGTTGAAGGAGCGAGAAGGGGATGATGACGACTTCTACTCAACGTATGTGAGTGAAACTGATGGTAGGTCGTCTAAAGGAGAGTCATGCGAGAGTATCAGCTTTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016324 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0036211 GO:0040007 GO:0040008 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080092 GO:0090406 GO:0098590 GO:0120025 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

662

Amino Acids

73.48

Weight (kDa)

8.46

Isoelectric Point (pI)

42.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	33 - 71	1.1e-09	Leucine rich repeat N-terminal domain
Pkinase	PF00069	361 - 623	5.5e-29	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	361 - 574	6.3e-28	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07040 AT5G35390
fragaria_vesca	FvH4_4g06060 FvH4_5g22250
malus_domestica	MD13G1232600.v1.1 MD16G1238200.v1.1
prunus_persica	Prupe.1G064100_v2.0.a1
pyrus_communis	pycom13g20500 pycom13g20530
rosa_chinensis	RchiOBHm_Chr4g0397621
rosa_laevigata	RLG00000009423
rosa_multiflora	Rmu_co8327933.1_g000001 Rmu_sc0002729.1_g000002 Rmu_sc0005653.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342430
rosa_rugosa	Rorug03G0342300
rosa_samantha	Rh4AG079400 Rh4BG077300 Rh4CG085000 Rh4DG072400
rosa_wichuraiana	Rw4G006500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	776, 1116
AasI	GACNNNNNNGTC	1 cut(s)	888
Acc36I	ACCTGC	1 cut(s)	1062
Acc65I	GGTACC	1 cut(s)	46
AccB1I	GGYRCC	2 cut(s)	46, 1735
AccI	GTMKAC	2 cut(s)	33, 892
AccII	CGCG	4 cut(s)	19, 155, 791, 862
AciI	CCGC	8 cut(s)	216, 686, 791, 838, 860, 869, 1134, 1559
AclI	AACGTT	1 cut(s)	1470
AclWI	GGATC	2 cut(s)	638, 1639
AcoI	YGGCCR	3 cut(s)	498, 1077, 1364
AcsI	RAATTY	3 cut(s)	483, 1046, 1658
AfaI	GTAC	2 cut(s)	22, 48
AfiI	CCNNNNNNNGG	4 cut(s)	89, 957, 1540, 1617
AflIII	ACRYGT	1 cut(s)	153
AgeI	ACCGGT	1 cut(s)	476
AhlI	ACTAGT	1 cut(s)	52
AjiI	CACGTC	1 cut(s)	1834
AjnI	CCWGG	1 cut(s)	412
AjuI	GAANNNNNNNTTGG	2 cut(s)	440, 472
Alw21I	GWGCWC	1 cut(s)	1203
Alw26I	GTCTC	5 cut(s)	65, 223, 520, 635, 930
AlwI	GGATC	2 cut(s)	638, 1639
AlwNI	CAGNNNCTG	2 cut(s)	104, 998
Ama87I	CYCGRG	1 cut(s)	1714
AoxI	GGCC	7 cut(s)	159, 335, 498, 792, 1077, 1364, 1560
ApeKI	GCWGC	4 cut(s)	362, 840, 992, 995
ApoI	RAATTY	3 cut(s)	483, 1046, 1658
AseI	ATTAAT	2 cut(s)	1320, 1517
AsiGI	ACCGGT	1 cut(s)	476
Asp700I	GAANNNNTTC	3 cut(s)	542, 1157, 1497
Asp718I	GGTACC	1 cut(s)	46
AspLEI	GCGC	1 cut(s)	19
AspS9I	GGNCC	5 cut(s)	335, 451, 614, 764, 881
AsuC2I	CCSGG	1 cut(s)	1664
AsuHPI	GGTGA	4 cut(s)	1445, 1471, 1591, 1720
AvaI	CYCGRG	1 cut(s)	1714
AvaII	GGWCC	4 cut(s)	451, 614, 764, 881
BaeGI	GKGCMC	1 cut(s)	1738
BaeI	ACNNNNGTAYC	2 cut(s)	548, 581
BalI	TGGCCA	2 cut(s)	500, 1366
BanI	GGYRCC	2 cut(s)	46, 1735
BbsI	GAAGAC	1 cut(s)	1772
Bbv12I	GWGCWC	1 cut(s)	1203
BbvCI	CCTCAGC	1 cut(s)	26
BbvI	GCAGC	4 cut(s)	349, 852, 1004, 1007
BccI	CCATC	5 cut(s)	232, 892, 979, 1138, 1934
BciT130I	CCWGG	1 cut(s)	414
BclI	TGATCA	1 cut(s)	1527
BcnI	CCSGG	1 cut(s)	1664
BcoDI	GTCTC	5 cut(s)	65, 223, 520, 635, 930
BcuI	ACTAGT	1 cut(s)	52
BfaI	CTAG	2 cut(s)	53, 1431
BfmI	CTRYAG	5 cut(s)	233, 264, 893, 1261, 1564
BfuAI	ACCTGC	1 cut(s)	1062
BglII	AGATCT	2 cut(s)	1060, 1568
BisI	GCNGC	7 cut(s)	217, 363, 792, 841, 993, 996, 1560
BlsI	GCNGC	7 cut(s)	218, 364, 793, 842, 994, 997, 1561
Bme1390I	CCNGG	2 cut(s)	414, 1664
Bme18I	GGWCC	4 cut(s)	451, 614, 764, 881
BmeT110I	CYCGRG	1 cut(s)	1714
BmgBI	CACGTC	1 cut(s)	1834
BmgT120I	GGNCC	5 cut(s)	335, 451, 614, 764, 881
BmiI	GGNNCC	6 cut(s)	48, 220, 539, 765, 1443, 1737
BmrFI	CCNGG	2 cut(s)	414, 1664
BmsI	GCATC	3 cut(s)	409, 918, 1118
BoxI	GACNNNNGTC	1 cut(s)	927
BpiI	GAAGAC	1 cut(s)	1772
BpmI	CTGGAG	4 cut(s)	247, 570, 1020, 1557
Bpu10I	CCTNAGC	2 cut(s)	26, 967
BpuEI	CTTGAG	4 cut(s)	101, 319, 353, 1048
BpuMI	CCSGG	1 cut(s)	1664
BsaJI	CCNNGG	3 cut(s)	413, 814, 1723
BsaWI	WCCGGW	3 cut(s)	476, 878, 957
BsaXI	ACNNNNNCTCC	2 cut(s)	1829, 1859
Bsc4I	CCNNNNNNNGG	4 cut(s)	89, 957, 1540, 1617
Bse118I	RCCGGY	2 cut(s)	476, 905
Bse1I	ACTGG	2 cut(s)	553, 1367
Bse3DI	GCAATG	1 cut(s)	217
BseBI	CCWGG	1 cut(s)	414
BseDI	CCNNGG	3 cut(s)	413, 814, 1723
BseGI	GGATG	8 cut(s)	293, 424, 721, 909, 990, 1103, 1192, 1906
BseLI	CCNNNNNNNGG	4 cut(s)	89, 957, 1540, 1617
BseMI	GCAATG	1 cut(s)	217
BseMII	CTCAG	7 cut(s)	40, 96, 515, 646, 726, 981, 1290
BseNI	ACTGG	2 cut(s)	553, 1367
BseRI	GAGGAG	2 cut(s)	53, 417
BseSI	GKGCMC	1 cut(s)	1738
BseX3I	CGGCCG	1 cut(s)	1077
BseXI	GCAGC	4 cut(s)	349, 852, 1004, 1007
BsgI	GTGCAG	1 cut(s)	1011
Bsh1236I	CGCG	4 cut(s)	19, 155, 791, 862
Bsh1285I	CGRYCG	2 cut(s)	1080, 1809
BshFI	GGCC	7 cut(s)	161, 337, 500, 794, 1079, 1366, 1562
BshNI	GGYRCC	2 cut(s)	46, 1735
BshTI	ACCGGT	1 cut(s)	476
BsiEI	CGRYCG	2 cut(s)	1080, 1809
BsiHKAI	GWGCWC	1 cut(s)	1203
BsiHKCI	CYCGRG	1 cut(s)	1714
BsiSI	CCGG	5 cut(s)	477, 879, 906, 958, 1664
BslFI	GGGAC	1 cut(s)	777
BslI	CCNNNNNNNGG	4 cut(s)	89, 957, 1540, 1617
BsmAI	GTCTC	5 cut(s)	65, 223, 520, 635, 930
BsmFI	GGGAC	1 cut(s)	777
BsmI	GAATGC	1 cut(s)	175
BsnI	GGCC	7 cut(s)	161, 337, 500, 794, 1079, 1366, 1562
BsoBI	CYCGRG	1 cut(s)	1714
Bsp1286I	GDGCHC	2 cut(s)	1203, 1738
Bsp143I	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
Bsp19I	CCATGG	1 cut(s)	1723
BspACI	CCGC	8 cut(s)	216, 686, 791, 838, 860, 869, 1134, 1559
BspANI	GGCC	7 cut(s)	161, 337, 500, 794, 1079, 1366, 1562
BspCNI	CTCAG	7 cut(s)	39, 97, 516, 645, 727, 980, 1291
BspFNI	CGCG	4 cut(s)	19, 155, 791, 862
BspHI	TCATGA	1 cut(s)	315
BspLI	GGNNCC	6 cut(s)	48, 220, 539, 765, 1443, 1737
BspMAI	CTGCAG	1 cut(s)	237
BspMI	ACCTGC	1 cut(s)	1062
BspPI	GGATC	2 cut(s)	638, 1639
BspT107I	GGYRCC	2 cut(s)	46, 1735
BsrDI	GCAATG	1 cut(s)	217
BsrFI	RCCGGY	2 cut(s)	476, 905
BsrI	ACTGG	2 cut(s)	553, 1367
BssAI	RCCGGY	2 cut(s)	476, 905
BssECI	CCNNGG	3 cut(s)	413, 814, 1723
BssMI	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
BssNAI	GTATAC	1 cut(s)	34
BssT1I	CCWWGG	2 cut(s)	814, 1723
Bst1107I	GTATAC	1 cut(s)	34
Bst2UI	CCWGG	1 cut(s)	414
Bst4CI	ACNGT	2 cut(s)	732, 1820
Bst6I	CTCTTC	3 cut(s)	1148, 1683, 1872
BstC8I	GCNNGC	1 cut(s)	15
BstDEI	CTNAG	9 cut(s)	26, 105, 308, 524, 632, 735, 967, 978, 1299
BstDSI	CCRYGG	1 cut(s)	1723
BstEII	GGTNACC	1 cut(s)	1451
BstF5I	GGATG	8 cut(s)	293, 424, 721, 909, 990, 1103, 1192, 1906
BstFNI	CGCG	4 cut(s)	19, 155, 791, 862
BstHHI	GCGC	1 cut(s)	19
BstKTI	GATC	9 cut(s)	646, 825, 1063, 1383, 1530, 1571, 1647, 1809, 1875
BstMAI	GTCTC	5 cut(s)	65, 223, 520, 635, 930
BstMBI	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
BstMCI	CGRYCG	2 cut(s)	1080, 1809
BstMWI	GCNNNNNNNGC	3 cut(s)	10, 216, 788
BstNI	CCWGG	1 cut(s)	414
BstPAI	GACNNNNGTC	1 cut(s)	927
BstPI	GGTNACC	1 cut(s)	1451
BstSCI	CCNGG	2 cut(s)	412, 1662
BstSFI	CTRYAG	5 cut(s)	233, 264, 893, 1261, 1564
BstSLI	GKGCMC	1 cut(s)	1738
BstUI	CGCG	4 cut(s)	19, 155, 791, 862
BstV1I	GCAGC	4 cut(s)	349, 852, 1004, 1007
BstV2I	GAAGAC	1 cut(s)	1772
BstX2I	RGATCY	4 cut(s)	643, 1060, 1568, 1644
BstXI	CCANNNNNNTGG	1 cut(s)	548
BstYI	RGATCY	4 cut(s)	643, 1060, 1568, 1644
BstZ17I	GTATAC	1 cut(s)	34
BstZI	CGGCCG	1 cut(s)	1077
BsuRI	GGCC	7 cut(s)	161, 337, 500, 794, 1079, 1366, 1562
BtgI	CCRYGG	1 cut(s)	1723
BtrI	CACGTC	1 cut(s)	1834
BtsCI	GGATG	8 cut(s)	293, 424, 721, 909, 990, 1103, 1192, 1906
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	2 cut(s)	546, 1128
BveI	ACCTGC	1 cut(s)	1062
Cac8I	GCNNGC	1 cut(s)	15
CaiI	CAGNNNCTG	2 cut(s)	104, 998
CciI	TCATGA	1 cut(s)	315
CfoI	GCGC	1 cut(s)	19
Cfr10I	RCCGGY	2 cut(s)	476, 905
Cfr13I	GGNCC	5 cut(s)	335, 451, 614, 764, 881
Csp6I	GTAC	2 cut(s)	21, 47
CspAI	ACCGGT	1 cut(s)	476
CviQI	GTAC	2 cut(s)	21, 47
DdeI	CTNAG	9 cut(s)	26, 105, 308, 524, 632, 735, 967, 978, 1299
DpnI	GATC	9 cut(s)	645, 824, 1062, 1382, 1529, 1570, 1646, 1808, 1874
DpnII	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
DrdI	GACNNNNNNGTC	1 cut(s)	888
DseDI	GACNNNNNNGTC	1 cut(s)	888
EaeI	YGGCCR	3 cut(s)	498, 1077, 1364
EagI	CGGCCG	1 cut(s)	1077
Eam1104I	CTCTTC	3 cut(s)	1148, 1683, 1872
EarI	CTCTTC	3 cut(s)	1148, 1683, 1872
EclXI	CGGCCG	1 cut(s)	1077
Eco130I	CCWWGG	2 cut(s)	814, 1723
Eco47I	GGWCC	4 cut(s)	451, 614, 764, 881
Eco52I	CGGCCG	1 cut(s)	1077
Eco88I	CYCGRG	1 cut(s)	1714
Eco91I	GGTNACC	1 cut(s)	1451
EcoO109I	RGGNCCY	1 cut(s)	764
EcoO65I	GGTNACC	1 cut(s)	1451
EcoRII	CCWGG	1 cut(s)	412
EcoT14I	CCWWGG	2 cut(s)	814, 1723
EcoT22I	ATGCAT	1 cut(s)	607
ErhI	CCWWGG	2 cut(s)	814, 1723
FalI	AAGNNNNNCTT	2 cut(s)	169, 201
FaqI	GGGAC	1 cut(s)	777
FbaI	TGATCA	1 cut(s)	1527
FblI	GTMKAC	2 cut(s)	33, 892
Fnu4HI	GCNGC	7 cut(s)	217, 363, 792, 841, 993, 996, 1560
FokI	GGATG	8 cut(s)	280, 431, 708, 896, 997, 1110, 1199, 1913
Fsp4HI	GCNGC	7 cut(s)	217, 363, 792, 841, 993, 996, 1560
FspBI	CTAG	2 cut(s)	53, 1431
GlaI	GCGC	1 cut(s)	18
GluI	GCNGC	7 cut(s)	217, 363, 792, 841, 993, 996, 1560
GsuI	CTGGAG	4 cut(s)	247, 570, 1020, 1557
HaeIII	GGCC	7 cut(s)	161, 337, 500, 794, 1079, 1366, 1562
HapII	CCGG	5 cut(s)	477, 879, 906, 958, 1664
HhaI	GCGC	1 cut(s)	19
Hin6I	GCGC	1 cut(s)	17
HinP1I	GCGC	1 cut(s)	17
HindIII	AAGCTT	5 cut(s)	310, 512, 1016, 1277, 1309
HinfI	GANTC	7 cut(s)	101, 128, 304, 628, 704, 1789, 1961
HpaII	CCGG	5 cut(s)	477, 879, 906, 958, 1664
HphI	GGTGA	4 cut(s)	1445, 1471, 1591, 1720
Hpy166II	GTNNAC	5 cut(s)	34, 474, 893, 1711, 1826
Hpy188I	TCNGA	6 cut(s)	100, 106, 401, 736, 914, 1811
Hpy188III	TCNNGA	9 cut(s)	226, 316, 352, 1027, 1150, 1196, 1384, 1574, 1801
Hpy8I	GTNNAC	5 cut(s)	34, 474, 893, 1711, 1826
Hpy99I	CGWCG	2 cut(s)	1596, 1835
HpyCH4III	ACNGT	2 cut(s)	732, 1820
HpyCH4IV	ACGT	5 cut(s)	39, 1470, 1594, 1833, 1922
HpyF10VI	GCNNNNNNNGC	3 cut(s)	10, 216, 788
HpyF3I	CTNAG	9 cut(s)	26, 105, 308, 524, 632, 735, 967, 978, 1299
HpySE526I	ACGT	5 cut(s)	39, 1470, 1594, 1833, 1922
HspAI	GCGC	1 cut(s)	17
KpnI	GGTACC	1 cut(s)	50
Ksp22I	TGATCA	1 cut(s)	1527
Kzo9I	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
LmnI	GCTCC	5 cut(s)	224, 250, 1106, 1447, 1888
Lsp1109I	GCAGC	4 cut(s)	349, 852, 1004, 1007
LweI	GCATC	3 cut(s)	409, 918, 1118
MaeI	CTAG	2 cut(s)	53, 1431
MaeII	ACGT	5 cut(s)	39, 1470, 1594, 1833, 1922
MaeIII	GTNAC	3 cut(s)	372, 662, 1451
MalI	GATC	9 cut(s)	645, 824, 1062, 1382, 1529, 1570, 1646, 1808, 1874
MboI	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
MflI	RGATCY	4 cut(s)	643, 1060, 1568, 1644
MhlI	GDGCHC	2 cut(s)	1203, 1738
MlsI	TGGCCA	2 cut(s)	500, 1366
MluCI	AATT	8 cut(s)	395, 483, 503, 542, 1046, 1518, 1658, 1669
MluI	ACGCGT	1 cut(s)	153
MluNI	TGGCCA	2 cut(s)	500, 1366
MlyI	GAGTC	3 cut(s)	298, 637, 1970
MmeI	TCCRAC	2 cut(s)	1491, 1827
Mox20I	TGGCCA	2 cut(s)	500, 1366
Mph1103I	ATGCAT	1 cut(s)	607
MroXI	GAANNNNTTC	3 cut(s)	542, 1157, 1497
MscI	TGGCCA	2 cut(s)	500, 1366
MseI	TTAA	6 cut(s)	587, 608, 834, 1223, 1320, 1517
MslI	CAYNNNNRTG	1 cut(s)	55
Msp20I	TGGCCA	2 cut(s)	500, 1366
MspA1I	CMGCKG	2 cut(s)	688, 998
MspI	CCGG	5 cut(s)	477, 879, 906, 958, 1664
MspR9I	CCNGG	2 cut(s)	414, 1664
Mva1269I	GAATGC	1 cut(s)	175
MvaI	CCWGG	1 cut(s)	414
MvnI	CGCG	4 cut(s)	19, 155, 791, 862
MwoI	GCNNNNNNNGC	3 cut(s)	10, 216, 788
NciI	CCSGG	1 cut(s)	1664
NcoI	CCATGG	1 cut(s)	1723
NdeII	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
NlaIV	GGNNCC	6 cut(s)	48, 220, 539, 765, 1443, 1737
NmeAIII	GCCGAG	1 cut(s)	1105
NmuCI	GTSAC	2 cut(s)	372, 1451
NsiI	ATGCAT	1 cut(s)	607
PagI	TCATGA	1 cut(s)	315
PctI	GAATGC	1 cut(s)	175
PdmI	GAANNNNTTC	3 cut(s)	542, 1157, 1497
PfeI	GAWTC	4 cut(s)	101, 128, 704, 1789
PinAI	ACCGGT	1 cut(s)	476
PkrI	GCNGC	7 cut(s)	218, 364, 793, 842, 994, 997, 1561
Ple19I	CGATCG	1 cut(s)	1809
PleI	GAGTC	3 cut(s)	298, 636, 1969
PpsI	GAGTC	3 cut(s)	298, 636, 1969
PpuMI	RGGWCCY	1 cut(s)	764
PshAI	GACNNNNGTC	1 cut(s)	927
PshBI	ATTAAT	2 cut(s)	1320, 1517
PsiI	TTATAA	2 cut(s)	776, 1116
Psp1406I	AACGTT	1 cut(s)	1470
Psp5II	RGGWCCY	1 cut(s)	764
Psp6I	CCWGG	1 cut(s)	412
PspEI	GGTNACC	1 cut(s)	1451
PspGI	CCWGG	1 cut(s)	412
PspN4I	GGNNCC	6 cut(s)	48, 220, 539, 765, 1443, 1737
PspPI	GGNCC	5 cut(s)	335, 451, 614, 764, 881
PspPPI	RGGWCCY	1 cut(s)	764
PsrI	GAACNNNNNNTAC	2 cut(s)	561, 593
PstI	CTGCAG	1 cut(s)	237
PstNI	CAGNNNCTG	2 cut(s)	104, 998
PsuI	RGATCY	4 cut(s)	643, 1060, 1568, 1644
PvuI	CGATCG	1 cut(s)	1809
PvuII	CAGCTG	1 cut(s)	998
RsaI	GTAC	2 cut(s)	22, 48
RsaNI	GTAC	2 cut(s)	21, 47
RseI	CAYNNNNRTG	1 cut(s)	55
SaqAI	TTAA	6 cut(s)	587, 608, 834, 1223, 1320, 1517
SatI	GCNGC	7 cut(s)	217, 363, 792, 841, 993, 996, 1560
Sau3AI	GATC	9 cut(s)	643, 822, 1060, 1380, 1527, 1568, 1644, 1806, 1872
Sau96I	GGNCC	5 cut(s)	335, 451, 614, 764, 881
SchI	GAGTC	3 cut(s)	298, 637, 1970
ScrFI	CCNGG	2 cut(s)	414, 1664
SduI	GDGCHC	2 cut(s)	1203, 1738
SfaNI	GCATC	3 cut(s)	409, 918, 1118
SfcI	CTRYAG	5 cut(s)	233, 264, 893, 1261, 1564
SinI	GGWCC	4 cut(s)	451, 614, 764, 881
SmiMI	CAYNNNNRTG	1 cut(s)	55
SmlI	CTYRAG	4 cut(s)	116, 298, 368, 1027
SmoI	CTYRAG	4 cut(s)	116, 298, 368, 1027
SpeI	ACTAGT	1 cut(s)	52
Sse9I	AATT	8 cut(s)	395, 483, 503, 542, 1046, 1518, 1658, 1669
SsiI	CCGC	8 cut(s)	216, 686, 791, 838, 860, 869, 1134, 1559
SspMI	CTAG	2 cut(s)	53, 1431
StyD4I	CCNGG	2 cut(s)	412, 1662
StyI	CCWWGG	2 cut(s)	814, 1723
TaaI	ACNGT	2 cut(s)	732, 1820
TaiI	ACGT	5 cut(s)	42, 1473, 1597, 1836, 1925
TaqI	TCGA	3 cut(s)	273, 1591, 1875
TasI	AATT	8 cut(s)	395, 483, 503, 542, 1046, 1518, 1658, 1669
TauI	GCSGC	3 cut(s)	219, 794, 1562
TfiI	GAWTC	4 cut(s)	101, 128, 704, 1789
Tru1I	TTAA	6 cut(s)	587, 608, 834, 1223, 1320, 1517
Tru9I	TTAA	6 cut(s)	587, 608, 834, 1223, 1320, 1517
TscAI	CASTG	2 cut(s)	553, 1128
TseFI	GTSAC	2 cut(s)	372, 1451
TseI	GCWGC	4 cut(s)	362, 840, 992, 995
Tsp45I	GTSAC	2 cut(s)	372, 1451
TspDTI	ATGAA	6 cut(s)	304, 332, 1011, 1184, 1220, 1316
TspGWI	ACGGA	3 cut(s)	211, 477, 1512
TspRI	CASTG	2 cut(s)	553, 1128
VpaK11BI	GGWCC	4 cut(s)	451, 614, 764, 881
VspI	ATTAAT	2 cut(s)	1320, 1517
XapI	RAATTY	3 cut(s)	483, 1046, 1658
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1359
XmiI	GTMKAC	2 cut(s)	33, 892
XmnI	GAANNNNTTC	3 cut(s)	542, 1157, 1497
XspI	CTAG	2 cut(s)	53, 1431
Zsp2I	ATGCAT	1 cut(s)	607

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.