Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0009804

Physical Location & Seq

Genomic Coordinates Forward (+)

16634690 .. 16638326

Gene Structure 3637 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g20500.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGATCTATCCCTCCTCATTTGACCTTTGTAAACACGCAGCCCCCTCTAAAAGGGCGCACACGCTGCCCTTGTGCGTGTACGTACAACCCTCTTATGCTACGTACCTACACCACTATTTGGAGCAACGTAACAGGATGATGAAGATGATGATGATGATGATGAAGCAGTGTGAATCATCATCGTTAATGTCGCCTCGTGCTCTTGCTTTCTTCTTCATTTTGTTATATGTTTGTGTTGCCTCTCCTGCGGGGGCTTCTGAATCCGAAACTCTCCTCAAGCTTAAGGATTCCTTACAAAACACCGACGGATTAACCACTTGGAAACCATCGACCAGTCCCTGCACCGCCCAAAAGCCGAACTGGATGGGTATTCGTTGTGATGGAAGGGGGAGAGTTTGGGCTTTGCAGCTTGAGAATTTGGGGCTCAAGGGTGAAATCAATGTGGGCTTGCTCCAGGACCTGCCTGACTTAAGAACCATAGGCTTTATGAATAACAGTTTTGAGGGTCCATTGCCTGATTTGAGGAAAATTATCGGATTAAAAACTGTCTACCTGACGGGTAATAAATTCTCTGGCACGATTCCTTCAGATTGGTTCACAGGAATGTCATCGTTGAAGAAGCTCCACATGGCGAATAATCAGTTTACGGGAGAGATTCCAAAGTCGTTGGCAGGGTTGGATAAGCTGGTGGAGCTGAGTATTGAAGGGAACAAATTCGAAGGCAAGATACCAGATTTTAGGCAGCCCAGGTTGACAATTTTTAACGTCTCCAACAACAAACTGGAGGGTGAGATCCCGAAAAGCCTAAGAAAATTGGATGCAAGCTCCTTTGCAGGGAATGAAGAACTATGTGGAGGGCCATTAAAAGCATGCAGTACCCCCTCGAAGAAGCCCGCAACCTGGATAATCGTGCTGATTGTGATCGCTGTCATAGTAGCAATCATCGCCATAGTTGCTTTACTGGTCTTCCTCCTTGGACGCCGCAAAAAATCATCTGAATCATCGGTAGAGGCTCCACCACCATCAACAGCAACTGTCCAAAACAGATCAGTTCAAAAAGAACCAGAGCACCAAGCAAGTGCTCCAGGCTCACCTGAAAACTCGATTAAAGGAGGGAATGGAAAGAAGGGTGAACAGAGCTTAAAGCTTTCATTTGTGAGAGACGACAGGGAGAGGTTTGATATGCAAGACTTGCTGAGAGCCTCGGCGGAGGTGTTAGGCAGCGGTTGCTTTGGGTCATCTTACAAGGCTGCTTTGTTGACCGGACCAGTGATGGTTGTGAAGAGGTATAAGCAGATGAATAATGTAGGAAGAGAGGAGTTCATAGAGCACATGAGAAGGATTGGGAGATTGGGACATCCTAATTTGCTTCCACTTGTTGCTTATTATTATAAGAAGGAAGAGAAGCTCTTGATTTCTGACCATGTTCTAAACGGCAGCTTGGCTGCCCATCTTCATGGAAACCAAACCCTCGACCATCCAAGCCTTGACTGGCCGACCCGTTTGAAGATTGTCAAAGGAGTAGCCCATGGCTTACGCTATCTCTACACTGAGCTTCCCAGCCTAGTAGCACCCCATGGCCACCTCAAATCCTCAAACGTTCTTCTCAACGAGTCCTACGAGCCCCTTATCACTGACTACGGCCTAATCCCTGTGGTAAACCAAGAACATGCTCACACCCTCATGGTGGCCTACAAGTCCCCAGAGTACATGCAAAGCAAGCGCGTGACAAAGAAGACCGACGTGTGGAGCTTCGGAGTGTTGATCTTGGAGATCTTAACGGGGAAGTTACCCACCAACTTTTTGCAGCAAGGTAAGGGAAGTGAGGAGGATTTGGCAAGTTGGGTGAACTCGGTGCCTCGGGAGGAGTGGTTTAGTCAGGTGTTTGATACAGGAATGGGGGCAGGCAAGAGTAGTGAGGGAGAGATGCTGAAGCTCTTGAAGATTGGGTTGGAATGTTGTGAAGGGGAAGTGGAGAAGAGACTAGATCTGAAAGAGGTTGTGGAGAGGATTGAAGAGTTGAAGGAGAGGGACAACCCTGGAGATTCAGATTTTTTCTCTACGTGTGCTAGTGAAGGTGACATGACGAAGATCGTTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016324 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0036211 GO:0040007 GO:0040008 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080092 GO:0090406 GO:0098590 GO:0120025 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

701

Amino Acids

77.75

Weight (kDa)

8.59

Isoelectric Point (pI)

38.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07040 AT5G35390
fragaria_vesca	FvH4_4g06060 FvH4_5g22250
malus_domestica	MD13G1232600.v1.1 MD16G1238200.v1.1
prunus_persica	Prupe.1G064100_v2.0.a1
pyrus_communis	pycom13g20500 pycom13g20530
rosa_chinensis	RchiOBHm_Chr4g0397621
rosa_laevigata	RLG00000009423
rosa_multiflora	Rmu_co8327933.1_g000001 Rmu_sc0002729.1_g000002 Rmu_sc0005653.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342430
rosa_rugosa	Rorug03G0342300
rosa_samantha	Rh4AG079400 Rh4BG077300 Rh4CG085000 Rh4DG072400
rosa_wichuraiana	Rw4G006500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1392
Acc36I	ACCTGC	1 cut(s)	468
AccB1I	GGYRCC	1 cut(s)	1855
AccB7I	CCANNNNNTGG	1 cut(s)	118
AccI	GTMKAC	1 cut(s)	549
AccII	CGCG	1 cut(s)	1725
AciI	CCGC	6 cut(s)	248, 345, 894, 982, 1208, 1224
AclI	AACGTT	1 cut(s)	1599
AclWI	GGATC	1 cut(s)	787
AcoI	YGGCCR	2 cut(s)	1493, 1579
AcsI	RAATTY	3 cut(s)	415, 566, 713
AcuI	CTGAAG	2 cut(s)	570, 1952
AcyI	GRCGYC	1 cut(s)	979
AfaI	GTAC	5 cut(s)	80, 84, 104, 877, 1709
AfiI	CCNNNNNNNGG	6 cut(s)	51, 118, 834, 900, 1687, 1746
AflII	CTTAAG	2 cut(s)	281, 469
AflIII	ACRYGT	2 cut(s)	1743, 2063
AgsI	TTSAA	7 cut(s)	616, 704, 1055, 1507, 1942, 2015, 2023
AjiI	CACGTC	1 cut(s)	1744
AjnI	CCWGG	5 cut(s)	453, 746, 899, 1084, 2038
AjuI	GAANNNNNNNTTGG	2 cut(s)	1934, 1966
Alw21I	GWGCWC	4 cut(s)	202, 1071, 1084, 1332
Alw26I	GTCTC	3 cut(s)	772, 1155, 1975
AlwI	GGATC	1 cut(s)	787
AlwNI	CAGNNNCTG	3 cut(s)	339, 460, 1034
Ama87I	CYCGRG	1 cut(s)	1860
AoxI	GGCC	5 cut(s)	857, 1493, 1579, 1642, 1689
ApeKI	GCWGC	9 cut(s)	38, 64, 406, 742, 1221, 1250, 1437, 1445, 1807
ApoI	RAATTY	3 cut(s)	415, 566, 713
Asp700I	GAANNNNTTC	1 cut(s)	713
AspLEI	GCGC	2 cut(s)	58, 1725
AspS9I	GGNCC	4 cut(s)	457, 506, 857, 1265
AsuHPI	GGTGA	6 cut(s)	443, 800, 1083, 1142, 1858, 2090
AsuII	TTCGAA	1 cut(s)	717
AvaI	CYCGRG	1 cut(s)	1860
AvaII	GGWCC	3 cut(s)	457, 506, 1265
BalI	TGGCCA	1 cut(s)	1581
BanI	GGYRCC	1 cut(s)	1855
BanII	GRGCYC	2 cut(s)	426, 1626
BarI	GAAGNNNNNNTAC	2 cut(s)	711, 743
BauI	CACGAG	1 cut(s)	195
BbsI	GAAGAC	2 cut(s)	958, 1742
Bbv12I	GWGCWC	4 cut(s)	202, 1071, 1084, 1332
BbvI	GCAGC	9 cut(s)	50, 51, 418, 754, 1233, 1237, 1432, 1449, 1819
BccI	CCATC	7 cut(s)	334, 358, 374, 1030, 1267, 1458, 1485
BceAI	ACGGC	2 cut(s)	1450, 1657
BciT130I	CCWGG	5 cut(s)	455, 748, 901, 1086, 2040
BcoDI	GTCTC	3 cut(s)	772, 1155, 1975
BfaI	CTAG	3 cut(s)	1565, 1985, 2070
BfrI	CTTAAG	2 cut(s)	281, 469
BfuAI	ACCTGC	1 cut(s)	468
BglII	AGATCT	2 cut(s)	1773, 1987
Bme1390I	CCNGG	5 cut(s)	455, 748, 901, 1086, 2040
Bme18I	GGWCC	3 cut(s)	457, 506, 1265
BmeT110I	CYCGRG	1 cut(s)	1860
BmgBI	CACGTC	1 cut(s)	1744
BmgT120I	GGNCC	4 cut(s)	457, 506, 857, 1265
BmiI	GGNNCC	3 cut(s)	507, 1014, 1857
BmrFI	CCNGG	5 cut(s)	455, 748, 901, 1086, 2040
BmsI	GCATC	2 cut(s)	808, 1917
BpiI	GAAGAC	2 cut(s)	958, 1742
BpmI	CTGGAG	4 cut(s)	437, 803, 1068, 2061
Bpu14I	TTCGAA	1 cut(s)	717
BpuEI	CTTGAG	3 cut(s)	260, 410, 431
BsaAI	YACGTR	3 cut(s)	82, 102, 2064
BsaBI	GATNNNNATC	1 cut(s)	920
BsaHI	GRCGYC	1 cut(s)	979
BsaJI	CCNNGG	7 cut(s)	746, 973, 1203, 1528, 1576, 1859, 2038
BsaWI	WCCGGW	1 cut(s)	1262
BsaXI	ACNNNNNCTCC	2 cut(s)	1856, 1886
Bsc4I	CCNNNNNNNGG	6 cut(s)	51, 118, 834, 900, 1687, 1746
Bse1I	ACTGG	6 cut(s)	333, 365, 786, 966, 1268, 1496
Bse3DI	GCAATG	1 cut(s)	509
Bse8I	GATNNNNATC	1 cut(s)	920
BseBI	CCWGG	5 cut(s)	455, 748, 901, 1086, 2040
BseDI	CCNNGG	7 cut(s)	746, 973, 1203, 1528, 1576, 1859, 2038
BseGI	GGATG	5 cut(s)	141, 369, 823, 1357, 1477
BseJI	GATNNNNATC	1 cut(s)	920
BseLI	CCNNNNNNNGG	6 cut(s)	51, 118, 834, 900, 1687, 1746
BseMI	GCAATG	1 cut(s)	509
BseMII	CTCAG	3 cut(s)	686, 1187, 1542
BseNI	ACTGG	6 cut(s)	333, 365, 786, 966, 1268, 1496
BseRI	GAGGAG	5 cut(s)	4, 263, 1331, 1841, 1880
BseXI	GCAGC	9 cut(s)	50, 51, 418, 754, 1233, 1237, 1432, 1449, 1819
BseYI	CCCAGC	1 cut(s)	1559
BsgI	GTGCAG	1 cut(s)	325
Bsh1236I	CGCG	1 cut(s)	1725
BshFI	GGCC	5 cut(s)	859, 1495, 1581, 1644, 1691
BshNI	GGYRCC	1 cut(s)	1855
BsiHKAI	GWGCWC	4 cut(s)	202, 1071, 1084, 1332
BsiHKCI	CYCGRG	1 cut(s)	1860
BsiSI	CCGG	1 cut(s)	1263
BslFI	GGGAC	4 cut(s)	321, 1368, 1684, 2045
BslI	CCNNNNNNNGG	6 cut(s)	51, 118, 834, 900, 1687, 1746
BsmAI	GTCTC	3 cut(s)	772, 1155, 1975
BsmBI	CGTCTC	2 cut(s)	772, 1155
BsmFI	GGGAC	4 cut(s)	321, 1368, 1684, 2045
BsnI	GGCC	5 cut(s)	859, 1495, 1581, 1644, 1691
BsoBI	CYCGRG	1 cut(s)	1860
Bsp119I	TTCGAA	1 cut(s)	717
Bsp1286I	GDGCHC	6 cut(s)	202, 426, 1071, 1084, 1332, 1626
Bsp143I	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
Bsp19I	CCATGG	2 cut(s)	1528, 1576
BspACI	CCGC	6 cut(s)	248, 345, 894, 982, 1208, 1224
BspANI	GGCC	5 cut(s)	859, 1495, 1581, 1644, 1691
BspCNI	CTCAG	3 cut(s)	687, 1188, 1543
BspFNI	CGCG	1 cut(s)	1725
BspLI	GGNNCC	3 cut(s)	507, 1014, 1857
BspMI	ACCTGC	1 cut(s)	468
BspPI	GGATC	1 cut(s)	787
BspT104I	TTCGAA	1 cut(s)	717
BspT107I	GGYRCC	1 cut(s)	1855
BspTI	CTTAAG	2 cut(s)	281, 469
BsrDI	GCAATG	1 cut(s)	509
BsrI	ACTGG	6 cut(s)	333, 365, 786, 966, 1268, 1496
BssECI	CCNNGG	7 cut(s)	746, 973, 1203, 1528, 1576, 1859, 2038
BssMI	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
BssNI	GRCGYC	1 cut(s)	979
BssSI	CACGAG	1 cut(s)	195
BssT1I	CCWWGG	3 cut(s)	973, 1528, 1576
Bst2BI	CACGAG	1 cut(s)	195
Bst2UI	CCWGG	5 cut(s)	455, 748, 901, 1086, 2040
Bst4CI	ACNGT	3 cut(s)	497, 547, 1036
Bst6I	CTCTTC	5 cut(s)	1277, 1306, 1395, 1973, 2010
BstACI	GRCGYC	1 cut(s)	979
BstAFI	CTTAAG	2 cut(s)	281, 469
BstAPI	GCANNNNNTGC	3 cut(s)	64, 1192, 1227
BstBAI	YACGTR	3 cut(s)	82, 102, 2064
BstBI	TTCGAA	1 cut(s)	717
BstC8I	GCNNGC	6 cut(s)	449, 823, 871, 894, 1721, 1906
BstDEI	CTNAG	4 cut(s)	695, 806, 1196, 1551
BstDSI	CCRYGG	2 cut(s)	1528, 1576
BstENI	CCTNNNNNAGG	1 cut(s)	49
BstF5I	GGATG	5 cut(s)	141, 369, 823, 1357, 1477
BstFNI	CGCG	1 cut(s)	1725
BstHHI	GCGC	2 cut(s)	58, 1725
BstKTI	GATC	8 cut(s)	6, 795, 924, 1049, 1767, 1776, 1990, 2094
BstMAI	GTCTC	3 cut(s)	772, 1155, 1975
BstMBI	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
BstMWI	GCNNNNNNNGC	8 cut(s)	64, 245, 691, 944, 953, 1192, 1227, 1720
BstNI	CCWGG	5 cut(s)	455, 748, 901, 1086, 2040
BstNSI	RCATGY	3 cut(s)	873, 1673, 1714
BstSCI	CCNGG	5 cut(s)	453, 746, 899, 1084, 2038
BstSNI	TACGTA	2 cut(s)	82, 102
BstUI	CGCG	1 cut(s)	1725
BstV1I	GCAGC	9 cut(s)	50, 51, 418, 754, 1233, 1237, 1432, 1449, 1819
BstV2I	GAAGAC	2 cut(s)	958, 1742
BstX2I	RGATCY	3 cut(s)	792, 1773, 1987
BstXI	CCANNNNNNTGG	1 cut(s)	1457
BstYI	RGATCY	3 cut(s)	792, 1773, 1987
BsuRI	GGCC	5 cut(s)	859, 1495, 1581, 1644, 1691
BtgI	CCRYGG	2 cut(s)	1528, 1576
BtgZI	GCGATG	1 cut(s)	928
BtrI	CACGTC	1 cut(s)	1744
BtsCI	GGATG	5 cut(s)	141, 369, 823, 1357, 1477
BtsI	GCAGTG	1 cut(s)	173
BtsIMutI	CAGTG	4 cut(s)	173, 1275, 1548, 1632
BveI	ACCTGC	1 cut(s)	468
Cac8I	GCNNGC	6 cut(s)	449, 823, 871, 894, 1721, 1906
CaiI	CAGNNNCTG	3 cut(s)	339, 460, 1034
CfoI	GCGC	2 cut(s)	58, 1725
Cfr13I	GGNCC	4 cut(s)	457, 506, 857, 1265
CseI	GACGC	1 cut(s)	987
Csp6I	GTAC	5 cut(s)	79, 83, 103, 876, 1708
CviQI	GTAC	5 cut(s)	79, 83, 103, 876, 1708
DdeI	CTNAG	4 cut(s)	695, 806, 1196, 1551
DpnI	GATC	8 cut(s)	5, 794, 923, 1048, 1766, 1775, 1989, 2093
DpnII	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
EaeI	YGGCCR	2 cut(s)	1493, 1579
Eam1104I	CTCTTC	5 cut(s)	1277, 1306, 1395, 1973, 2010
EarI	CTCTTC	5 cut(s)	1277, 1306, 1395, 1973, 2010
EciI	GGCGGA	1 cut(s)	1223
Eco105I	TACGTA	2 cut(s)	82, 102
Eco130I	CCWWGG	3 cut(s)	973, 1528, 1576
Eco24I	GRGCYC	2 cut(s)	426, 1626
Eco47I	GGWCC	3 cut(s)	457, 506, 1265
Eco57I	CTGAAG	2 cut(s)	570, 1952
Eco88I	CYCGRG	1 cut(s)	1860
EcoNI	CCTNNNNNAGG	1 cut(s)	49
EcoO109I	RGGNCCY	1 cut(s)	457
EcoRII	CCWGG	5 cut(s)	453, 746, 899, 1084, 2038
EcoT14I	CCWWGG	3 cut(s)	973, 1528, 1576
EcoT38I	GRGCYC	2 cut(s)	426, 1626
ErhI	CCWWGG	3 cut(s)	973, 1528, 1576
Esp3I	CGTCTC	2 cut(s)	772, 1155
FalI	AAGNNNNNCTT	2 cut(s)	275, 307
FaqI	GGGAC	4 cut(s)	321, 1368, 1684, 2045
FauI	CCCGC	2 cut(s)	241, 901
FblI	GTMKAC	1 cut(s)	549
FokI	GGATG	5 cut(s)	148, 376, 830, 1344, 1464
FriOI	GRGCYC	2 cut(s)	426, 1626
FspBI	CTAG	3 cut(s)	1565, 1985, 2070
GlaI	GCGC	2 cut(s)	57, 1724
GsaI	CCCAGC	1 cut(s)	1563
GsuI	CTGGAG	4 cut(s)	437, 803, 1068, 2061
HaeIII	GGCC	5 cut(s)	859, 1495, 1581, 1644, 1691
HapII	CCGG	1 cut(s)	1263
HgaI	GACGC	1 cut(s)	987
HhaI	GCGC	2 cut(s)	58, 1725
Hin1I	GRCGYC	1 cut(s)	979
Hin6I	GCGC	2 cut(s)	56, 1723
HinP1I	GCGC	2 cut(s)	56, 1723
HincII	GTYRAC	2 cut(s)	753, 1260
HindII	GTYRAC	2 cut(s)	753, 1260
HindIII	AAGCTT	2 cut(s)	278, 1145
HinfI	GANTC	8 cut(s)	173, 260, 287, 580, 655, 998, 1613, 2045
HpaII	CCGG	1 cut(s)	1263
HphI	GGTGA	6 cut(s)	443, 800, 1083, 1142, 1858, 2090
Hpy188I	TCNGA	9 cut(s)	259, 265, 536, 589, 997, 1420, 1757, 1992, 2050
Hpy188III	TCNNGA	4 cut(s)	796, 1411, 1862, 1939
Hpy99I	CGWCG	2 cut(s)	308, 1745
HpyCH4III	ACNGT	3 cut(s)	497, 547, 1036
HpyCH4IV	ACGT	7 cut(s)	81, 101, 127, 765, 1599, 1743, 2063
HpyCH4V	TGCA	8 cut(s)	342, 406, 821, 833, 873, 1186, 1714, 1807
HpyF10VI	GCNNNNNNNGC	8 cut(s)	64, 245, 691, 944, 953, 1192, 1227, 1720
HpyF3I	CTNAG	4 cut(s)	695, 806, 1196, 1551
HpySE526I	ACGT	7 cut(s)	81, 101, 127, 765, 1599, 1743, 2063
Hsp92I	GRCGYC	1 cut(s)	979
HspAI	GCGC	2 cut(s)	56, 1723
Kzo9I	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
LmnI	GCTCC	8 cut(s)	121, 456, 627, 691, 830, 1018, 1087, 1749
Lsp1109I	GCAGC	9 cut(s)	50, 51, 418, 754, 1233, 1237, 1432, 1449, 1819
LweI	GCATC	2 cut(s)	808, 1917
MaeI	CTAG	3 cut(s)	1565, 1985, 2070
MaeII	ACGT	7 cut(s)	81, 101, 127, 765, 1599, 1743, 2063
MaeIII	GTNAC	4 cut(s)	128, 1726, 1788, 2078
MalI	GATC	8 cut(s)	5, 794, 923, 1048, 1766, 1775, 1989, 2093
MboI	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
MflI	RGATCY	3 cut(s)	792, 1773, 1987
MhlI	GDGCHC	6 cut(s)	202, 426, 1071, 1084, 1332, 1626
MlsI	TGGCCA	1 cut(s)	1581
MluCI	AATT	7 cut(s)	415, 528, 566, 713, 756, 812, 1363
MluNI	TGGCCA	1 cut(s)	1581
MlyI	GAGTC	1 cut(s)	1622
MmeI	TCCRAC	3 cut(s)	657, 795, 1932
Mox20I	TGGCCA	1 cut(s)	1581
MroXI	GAANNNNTTC	1 cut(s)	713
MscI	TGGCCA	1 cut(s)	1581
MslI	CAYNNNNRTG	3 cut(s)	602, 1455, 1682
Msp20I	TGGCCA	1 cut(s)	1581
MspA1I	CMGCKG	1 cut(s)	1224
MspCI	CTTAAG	2 cut(s)	281, 469
MspI	CCGG	1 cut(s)	1263
MspR9I	CCNGG	5 cut(s)	455, 748, 901, 1086, 2040
MvaI	CCWGG	5 cut(s)	455, 748, 901, 1086, 2040
MvnI	CGCG	1 cut(s)	1725
MwoI	GCNNNNNNNGC	8 cut(s)	64, 245, 691, 944, 953, 1192, 1227, 1720
NcoI	CCATGG	2 cut(s)	1528, 1576
NdeII	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
NlaIV	GGNNCC	3 cut(s)	507, 1014, 1857
NmeAIII	GCCGAG	1 cut(s)	1184
NmuCI	GTSAC	2 cut(s)	1726, 2078
NspI	RCATGY	3 cut(s)	873, 1673, 1714
NspV	TTCGAA	1 cut(s)	717
PaeI	GCATGC	1 cut(s)	873
PcsI	WCGNNNNNNNCGW	1 cut(s)	1617
PdmI	GAANNNNTTC	1 cut(s)	713
PfeI	GAWTC	7 cut(s)	173, 260, 287, 580, 655, 998, 2045
PflMI	CCANNNNNTGG	1 cut(s)	118
PfoI	TCCNGGA	1 cut(s)	453
PleI	GAGTC	1 cut(s)	1621
PpsI	GAGTC	1 cut(s)	1621
Ppu21I	YACGTR	3 cut(s)	82, 102, 2064
PpuMI	RGGWCCY	1 cut(s)	457
PsiI	TTATAA	1 cut(s)	1392
Psp1406I	AACGTT	1 cut(s)	1599
Psp5II	RGGWCCY	1 cut(s)	457
Psp6I	CCWGG	5 cut(s)	453, 746, 899, 1084, 2038
PspFI	CCCAGC	1 cut(s)	1559
PspGI	CCWGG	5 cut(s)	453, 746, 899, 1084, 2038
PspN4I	GGNNCC	3 cut(s)	507, 1014, 1857
PspPI	GGNCC	4 cut(s)	457, 506, 857, 1265
PspPPI	RGGWCCY	1 cut(s)	457
PstNI	CAGNNNCTG	3 cut(s)	339, 460, 1034
PsuI	RGATCY	3 cut(s)	792, 1773, 1987
RsaI	GTAC	5 cut(s)	80, 84, 104, 877, 1709
RsaNI	GTAC	5 cut(s)	79, 83, 103, 876, 1708
RseI	CAYNNNNRTG	3 cut(s)	602, 1455, 1682
Sau3AI	GATC	8 cut(s)	3, 792, 921, 1046, 1764, 1773, 1987, 2091
Sau96I	GGNCC	4 cut(s)	457, 506, 857, 1265
SchI	GAGTC	1 cut(s)	1622
ScrFI	CCNGG	5 cut(s)	455, 748, 901, 1086, 2040
SduI	GDGCHC	6 cut(s)	202, 426, 1071, 1084, 1332, 1626
SfaNI	GCATC	2 cut(s)	808, 1917
SfuI	TTCGAA	1 cut(s)	717
SinI	GGWCC	3 cut(s)	457, 506, 1265
SmiMI	CAYNNNNRTG	3 cut(s)	602, 1455, 1682
SmlI	CTYRAG	5 cut(s)	275, 281, 410, 425, 469
SmoI	CTYRAG	5 cut(s)	275, 281, 410, 425, 469
SnaBI	TACGTA	2 cut(s)	82, 102
SphI	GCATGC	1 cut(s)	873
Sse9I	AATT	7 cut(s)	415, 528, 566, 713, 756, 812, 1363
SsiI	CCGC	6 cut(s)	248, 345, 894, 982, 1208, 1224
SspMI	CTAG	3 cut(s)	1565, 1985, 2070
StyD4I	CCNGG	5 cut(s)	453, 746, 899, 1084, 2038
StyI	CCWWGG	3 cut(s)	973, 1528, 1576
TaaI	ACNGT	3 cut(s)	497, 547, 1036
TaiI	ACGT	7 cut(s)	84, 104, 130, 768, 1602, 1746, 2066
TaqI	TCGA	5 cut(s)	329, 717, 884, 1103, 1473
TaqII	GACCGA	1 cut(s)	1754
TasI	AATT	7 cut(s)	415, 528, 566, 713, 756, 812, 1363
TatI	WGTACW	1 cut(s)	1707
TauI	GCSGC	1 cut(s)	984
TfiI	GAWTC	7 cut(s)	173, 260, 287, 580, 655, 998, 2045
TscAI	CASTG	4 cut(s)	173, 1275, 1555, 1639
TseFI	GTSAC	2 cut(s)	1726, 2078
TseI	GCWGC	9 cut(s)	38, 64, 406, 742, 1221, 1250, 1437, 1445, 1807
Tsp45I	GTSAC	2 cut(s)	1726, 2078
TspDTI	ATGAA	9 cut(s)	155, 176, 205, 503, 855, 1140, 1312, 1313, 1445
TspGWI	ACGGA	1 cut(s)	321
TspRI	CASTG	4 cut(s)	173, 1275, 1555, 1639
Van91I	CCANNNNNTGG	1 cut(s)	118
Vha464I	CTTAAG	2 cut(s)	281, 469
VpaK11BI	GGWCC	3 cut(s)	457, 506, 1265
XagI	CCTNNNNNAGG	1 cut(s)	49
XapI	RAATTY	3 cut(s)	415, 566, 713
XceI	RCATGY	3 cut(s)	873, 1673, 1714
XcmI	CCANNNNNNNNNTGG	2 cut(s)	778, 1488
XmiI	GTMKAC	1 cut(s)	549
XmnI	GAANNNNTTC	1 cut(s)	713
XspI	CTAG	3 cut(s)	1565, 1985, 2070

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.