Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005653.1

Orthogroup ID

OG0009804

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 1746

Gene Structure 1745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005653.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1244 bp

atgtcccgctgcagcatgcgcatgcggcgcagcgtgcattggacattgtttcctcaatgttctttgattcttctccttctgtttcatattaacgttgcctcctcagctgcacccccaccagaccccacagacaccctcctcaagttcaaggactcactcaagattagtggtaatgcgctgagtaattgggtgaagaccacgcctccgtgcgatggcaaaaaggcgaattgggatggcgttctttgtggcgaggggaagatttggggcttgcagcttgaaaagatggggttaagcggccacattaatgtcacagcactcacgcagcttccagacttaagaaccataagcatgatgcaaaataattttgagggttcgttgccggactggaggaaacttagtacgttgaaaacgttgtatatgtctgaaaataaattctcgggggacattccctccgactttttccagggaatgaaacaattgaagaagcttcatttggcgaataaccagtttacgggtcagattcccaagtcgttgacaaccttggataagctggtggagctgacccttcaagggaacaaattttcaggcaaaataccagattttccacaagttcgatggactgtctttaatgcgtccaaaaacgacttggagggtgagatcccagacggcttgagaaagttgagtacagactgctttgctgggaataaagatctatgtggagctccattacatgcatgctcagctccctcctcacgcgttaatacagagaagcccacgggtgtgagcaccgccctaattgtgattatgattgtgatagcagtcatatccatcggtgcggcaattttcttcatcatcgtcagacgtcgcaacaaaagatccgagtacttatcatcaaatatagaggcaccaccggcaccatcagtccataacagatcggtatcaccagttccaaaagaaccagaccaggttagccaaatctcagagcactcgagtaaaggaacgggaggaggaggaggaagcagtggaaagaaggctgatagcttgaagctctcgtttgtccgagacgacagggaaaggtttgatatgcaagacttgctaaaagcctccgccgaggtgttgggcagcggcagctttgggtcttcttacaaggccgcgctgctgaccggaccggtgatggttgtgaagaggtataagcagatgaacaatgtgggaagagaggagttccaagagcatatgaggagaat

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016324 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0036211 GO:0040007 GO:0040008 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080092 GO:0090406 GO:0098590 GO:0120025 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

414

Amino Acids

45.53

Weight (kDa)

9.5

Isoelectric Point (pI)

45.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07040 AT5G35390
fragaria_vesca	FvH4_4g06060 FvH4_5g22250
malus_domestica	MD13G1232600.v1.1 MD16G1238200.v1.1
prunus_persica	Prupe.1G064100_v2.0.a1
pyrus_communis	pycom13g20500 pycom13g20530
rosa_chinensis	RchiOBHm_Chr4g0397621
rosa_laevigata	RLG00000009423
rosa_multiflora	Rmu_co8327933.1_g000001 Rmu_sc0002729.1_g000002 Rmu_sc0005653.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342430
rosa_rugosa	Rorug03G0342300
rosa_samantha	Rh4AG079400 Rh4BG077300 Rh4CG085000 Rh4DG072400
rosa_wichuraiana	Rw4G006500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	865
Acc16I	TGCGCA	1 cut(s)	20
AccB1I	GGYRCC	2 cut(s)	904, 913
AccII	CGCG	2 cut(s)	756, 1154
AciI	CCGC	8 cut(s)	7, 25, 294, 789, 836, 1107, 1125, 1152
AclI	AACGTT	2 cut(s)	93, 410
AclWI	GGATC	2 cut(s)	652, 870
AcoI	YGGCCR	1 cut(s)	295
AcsI	RAATTY	2 cut(s)	431, 578
AcyI	GRCGYC	1 cut(s)	862
AfaI	GTAC	3 cut(s)	400, 685, 884
AfiI	CCNNNNNNNGG	3 cut(s)	212, 511, 570
AflII	CTTAAG	1 cut(s)	334
AflIII	ACRYGT	1 cut(s)	754
AgeI	ACCGGT	1 cut(s)	1168
AgsI	TTSAA	6 cut(s)	148, 278, 406, 481, 569, 1045
AjnI	CCWGG	2 cut(s)	462, 963
AjuI	GAANNNNNNNTTGG	2 cut(s)	476, 508
AleI	CACNNNNGTG	1 cut(s)	779
Alw21I	GWGCWC	3 cut(s)	724, 788, 987
Alw26I	GTCTC	1 cut(s)	1056
AlwI	GGATC	2 cut(s)	652, 870
Ama87I	CYCGRG	2 cut(s)	436, 988
AoxI	GGCC	2 cut(s)	295, 1149
ApeKI	GCWGC	9 cut(s)	9, 12, 30, 107, 271, 322, 1122, 1128, 1156
ApoI	RAATTY	2 cut(s)	431, 578
AseI	ATTAAT	1 cut(s)	303
AsiGI	ACCGGT	1 cut(s)	1168
AspLEI	GCGC	4 cut(s)	21, 30, 178, 1156
AspS9I	GGNCC	1 cut(s)	1166
AsuHPI	GGTGA	4 cut(s)	202, 665, 933, 1183
AvaI	CYCGRG	2 cut(s)	436, 988
AvaII	GGWCC	1 cut(s)	1166
BanI	GGYRCC	2 cut(s)	904, 913
BanII	GRGCYC	1 cut(s)	724
BbsI	GAAGAC	2 cut(s)	200, 1131
Bbv12I	GWGCWC	3 cut(s)	724, 788, 987
BbvCI	CCTCAGC	1 cut(s)	103
BbvI	GCAGC	8 cut(s)	24, 42, 94, 283, 334, 1134, 1140, 1143
BccI	CCATC	7 cut(s)	206, 227, 277, 609, 836, 925, 1168
BceAI	ACGGC	1 cut(s)	682
BciT130I	CCWGG	2 cut(s)	464, 965
BcoDI	GTCTC	1 cut(s)	1056
BfmI	CTRYAG	1 cut(s)	10
BfrI	CTTAAG	1 cut(s)	334
BglII	AGATCT	1 cut(s)	709
BlpI	GCTNAGC	1 cut(s)	739
BmcAI	AGTACT	1 cut(s)	884
Bme1390I	CCNGG	2 cut(s)	464, 965
Bme18I	GGWCC	1 cut(s)	1166
BmeT110I	CYCGRG	2 cut(s)	436, 988
BmgT120I	GGNCC	1 cut(s)	1166
BmiI	GGNNCC	2 cut(s)	906, 915
BmrFI	CCNGG	2 cut(s)	464, 965
BmsI	GCATC	1 cut(s)	342
BpiI	GAAGAC	2 cut(s)	200, 1131
BpmI	CTGGAG	1 cut(s)	406
Bpu10I	CCTNAGC	1 cut(s)	103
Bpu1102I	GCTNAGC	1 cut(s)	739
BpuEI	CTTGAG	3 cut(s)	125, 143, 691
BsaBI	GATNNNNATC	1 cut(s)	937
BsaHI	GRCGYC	1 cut(s)	862
BsaJI	CCNNGG	4 cut(s)	463, 540, 774, 1110
BsaWI	WCCGGW	2 cut(s)	1163, 1168
BsaXI	ACNNNNNCTCC	6 cut(s)	83, 113, 187, 217, 434, 464
Bsc4I	CCNNNNNNNGG	3 cut(s)	212, 511, 570
Bse118I	RCCGGY	2 cut(s)	910, 1168
Bse1I	ACTGG	3 cut(s)	389, 505, 944
Bse8I	GATNNNNATC	1 cut(s)	937
BseBI	CCWGG	2 cut(s)	464, 965
BseDI	CCNNGG	4 cut(s)	463, 540, 774, 1110
BseGI	GGATG	1 cut(s)	238
BseJI	GATNNNNATC	1 cut(s)	937
BseLI	CCNNNNNNNGG	3 cut(s)	212, 511, 570
BseMII	CTCAG	4 cut(s)	117, 170, 753, 993
BseNI	ACTGG	3 cut(s)	389, 505, 944
BseRI	GAGGAG	7 cut(s)	91, 128, 739, 1020, 1023, 1026, 1232
BseXI	GCAGC	8 cut(s)	24, 42, 94, 283, 334, 1134, 1140, 1143
BseYI	CCCAGC	1 cut(s)	698
BsgI	GTGCAG	1 cut(s)	93
Bsh1236I	CGCG	2 cut(s)	756, 1154
BshFI	GGCC	2 cut(s)	297, 1151
BshNI	GGYRCC	2 cut(s)	904, 913
BshTI	ACCGGT	1 cut(s)	1168
BsiHKAI	GWGCWC	3 cut(s)	724, 788, 987
BsiHKCI	CYCGRG	2 cut(s)	436, 988
BsiSI	CCGG	4 cut(s)	380, 911, 1164, 1169
BslFI	GGGAC	1 cut(s)	455
BslI	CCNNNNNNNGG	3 cut(s)	212, 511, 570
BsmAI	GTCTC	1 cut(s)	1056
BsmBI	CGTCTC	1 cut(s)	1056
BsmFI	GGGAC	1 cut(s)	455
BsnI	GGCC	2 cut(s)	297, 1151
BsoBI	CYCGRG	2 cut(s)	436, 988
Bsp1286I	GDGCHC	3 cut(s)	724, 788, 987
Bsp143I	GATC	4 cut(s)	657, 709, 875, 932
Bsp1720I	GCTNAGC	1 cut(s)	739
BspACI	CCGC	8 cut(s)	7, 25, 294, 789, 836, 1107, 1125, 1152
BspANI	GGCC	2 cut(s)	297, 1151
BspCNI	CTCAG	4 cut(s)	116, 171, 752, 992
BspFNI	CGCG	2 cut(s)	756, 1154
BspLI	GGNNCC	2 cut(s)	906, 915
BspMAI	CTGCAG	1 cut(s)	14
BspPI	GGATC	2 cut(s)	652, 870
BspT107I	GGYRCC	2 cut(s)	904, 913
BspTI	CTTAAG	1 cut(s)	334
BsrFI	RCCGGY	2 cut(s)	910, 1168
BsrI	ACTGG	3 cut(s)	389, 505, 944
BssAI	RCCGGY	2 cut(s)	910, 1168
BssECI	CCNNGG	4 cut(s)	463, 540, 774, 1110
BssMI	GATC	4 cut(s)	657, 709, 875, 932
BssNI	GRCGYC	1 cut(s)	862
BssT1I	CCWWGG	1 cut(s)	540
Bst2UI	CCWGG	2 cut(s)	464, 965
Bst4CI	ACNGT	1 cut(s)	622
Bst6I	CTCTTC	2 cut(s)	1178, 1207
BstACI	GRCGYC	1 cut(s)	862
BstAFI	CTTAAG	1 cut(s)	334
BstAPI	GCANNNNNTGC	1 cut(s)	1093
BstC8I	GCNNGC	5 cut(s)	17, 23, 35, 269, 736
BstDEI	CTNAG	5 cut(s)	103, 179, 395, 739, 979
BstDSI	CCRYGG	1 cut(s)	774
BstF5I	GGATG	1 cut(s)	238
BstFNI	CGCG	2 cut(s)	756, 1154
BstHHI	GCGC	4 cut(s)	21, 30, 178, 1156
BstKTI	GATC	4 cut(s)	660, 712, 878, 935
BstMAI	GTCTC	1 cut(s)	1056
BstMBI	GATC	4 cut(s)	657, 709, 875, 932
BstNI	CCWGG	2 cut(s)	464, 965
BstNSI	RCATGY	4 cut(s)	19, 25, 734, 738
BstSCI	CCNGG	2 cut(s)	462, 963
BstSFI	CTRYAG	1 cut(s)	10
BstUI	CGCG	2 cut(s)	756, 1154
BstV1I	GCAGC	8 cut(s)	24, 42, 94, 283, 334, 1134, 1140, 1143
BstV2I	GAAGAC	2 cut(s)	200, 1131
BstX2I	RGATCY	3 cut(s)	657, 709, 875
BstYI	RGATCY	3 cut(s)	657, 709, 875
BsuRI	GGCC	2 cut(s)	297, 1151
BtgI	CCRYGG	1 cut(s)	774
BtgZI	GCGATG	1 cut(s)	225
BtsCI	GGATG	1 cut(s)	238
BtsI	GCAGTG	1 cut(s)	1027
BtsIMutI	CAGTG	1 cut(s)	1027
Cac8I	GCNNGC	5 cut(s)	17, 23, 35, 269, 736
CfoI	GCGC	4 cut(s)	21, 30, 178, 1156
Cfr10I	RCCGGY	2 cut(s)	910, 1168
Cfr13I	GGNCC	1 cut(s)	1166
CpoI	CGGWCCG	1 cut(s)	1166
CseI	GACGC	1 cut(s)	621
CsiI	ACCWGGT	1 cut(s)	963
Csp6I	GTAC	3 cut(s)	399, 684, 883
CspAI	ACCGGT	1 cut(s)	1168
CspCI	CAANNNNNGTGG	2 cut(s)	148, 183
CspI	CGGWCCG	1 cut(s)	1166
CviAII	CATG	5 cut(s)	16, 22, 349, 731, 735
CviQI	GTAC	3 cut(s)	399, 684, 883
DdeI	CTNAG	5 cut(s)	103, 179, 395, 739, 979
DpnI	GATC	4 cut(s)	659, 711, 877, 934
DpnII	GATC	4 cut(s)	657, 709, 875, 932
EaeI	YGGCCR	1 cut(s)	295
Eam1104I	CTCTTC	2 cut(s)	1178, 1207
EarI	CTCTTC	2 cut(s)	1178, 1207
EciI	GGCGGA	1 cut(s)	1096
Ecl136II	GAGCTC	1 cut(s)	722
Eco130I	CCWWGG	1 cut(s)	540
Eco24I	GRGCYC	1 cut(s)	724
Eco47I	GGWCC	1 cut(s)	1166
Eco53kI	GAGCTC	1 cut(s)	722
Eco88I	CYCGRG	2 cut(s)	436, 988
EcoICRI	GAGCTC	1 cut(s)	722
EcoRII	CCWGG	2 cut(s)	462, 963
EcoT14I	CCWWGG	1 cut(s)	540
EcoT22I	ATGCAT	1 cut(s)	736
EcoT38I	GRGCYC	1 cut(s)	724
ErhI	CCWWGG	1 cut(s)	540
Esp3I	CGTCTC	1 cut(s)	1056
FaeI	CATG	5 cut(s)	19, 25, 352, 734, 738
FaqI	GGGAC	1 cut(s)	455
FatI	CATG	5 cut(s)	15, 21, 348, 730, 734
FauI	CCCGC	1 cut(s)	14
FauNDI	CATATG	1 cut(s)	1233
FokI	GGATG	1 cut(s)	245
FriOI	GRGCYC	1 cut(s)	724
FspAI	RTGCGCAY	1 cut(s)	20
FspI	TGCGCA	1 cut(s)	20
GlaI	GCGC	4 cut(s)	20, 29, 177, 1155
GsaI	CCCAGC	1 cut(s)	702
GsuI	CTGGAG	1 cut(s)	406
HaeIII	GGCC	2 cut(s)	297, 1151
HapII	CCGG	4 cut(s)	380, 911, 1164, 1169
HgaI	GACGC	1 cut(s)	621
HhaI	GCGC	4 cut(s)	21, 30, 178, 1156
Hin1I	GRCGYC	1 cut(s)	862
Hin1II	CATG	5 cut(s)	19, 25, 352, 734, 738
Hin6I	GCGC	4 cut(s)	19, 28, 176, 1154
HinP1I	GCGC	4 cut(s)	19, 28, 176, 1154
HincII	GTYRAC	1 cut(s)	534
HindII	GTYRAC	1 cut(s)	534
HindIII	AAGCTT	1 cut(s)	485
HinfI	GANTC	3 cut(s)	67, 152, 520
HpaII	CCGG	4 cut(s)	380, 911, 1164, 1169
HphI	GGTGA	4 cut(s)	202, 665, 933, 1183
Hpy166II	GTNNAC	2 cut(s)	510, 534
Hpy188I	TCNGA	7 cut(s)	424, 454, 519, 860, 880, 982, 1061
Hpy188III	TCNNGA	2 cut(s)	160, 329
Hpy8I	GTNNAC	2 cut(s)	510, 534
Hpy99I	CGWCG	1 cut(s)	867
HpyAV	CCTTC	3 cut(s)	86, 575, 1024
HpyCH4III	ACNGT	1 cut(s)	622
HpyCH4IV	ACGT	4 cut(s)	93, 401, 410, 862
HpyCH4V	TGCA	7 cut(s)	12, 37, 110, 271, 355, 734, 1087
HpyF3I	CTNAG	5 cut(s)	103, 179, 395, 739, 979
HpySE526I	ACGT	4 cut(s)	93, 401, 410, 862
Hsp92I	GRCGYC	1 cut(s)	862
Hsp92II	CATG	5 cut(s)	19, 25, 352, 734, 738
HspAI	GCGC	4 cut(s)	19, 28, 176, 1154
Kzo9I	GATC	4 cut(s)	657, 709, 875, 932
LmnI	GCTCC	4 cut(s)	556, 719, 727, 748
Lsp1109I	GCAGC	8 cut(s)	24, 42, 94, 283, 334, 1134, 1140, 1143
LweI	GCATC	1 cut(s)	342
MabI	ACCWGGT	1 cut(s)	963
MaeII	ACGT	4 cut(s)	93, 401, 410, 862
MaeIII	GTNAC	1 cut(s)	307
MalI	GATC	4 cut(s)	659, 711, 877, 934
MboI	GATC	4 cut(s)	657, 709, 875, 932
MboII	GAAGA	8 cut(s)	62, 205, 268, 493, 838, 1131, 1195, 1224
MfeI	CAATTG	1 cut(s)	476
MflI	RGATCY	3 cut(s)	657, 709, 875
MhlI	GDGCHC	3 cut(s)	724, 788, 987
MluCI	AATT	8 cut(s)	184, 226, 361, 431, 476, 578, 795, 840
MluI	ACGCGT	1 cut(s)	754
MlyI	GAGTC	1 cut(s)	146
MmeI	TCCRAC	1 cut(s)	477
Mph1103I	ATGCAT	1 cut(s)	736
MseI	TTAA	6 cut(s)	90, 290, 303, 335, 627, 759
MslI	CAYNNNNRTG	4 cut(s)	20, 303, 347, 779
MspA1I	CMGCKG	3 cut(s)	9, 107, 1125
MspCI	CTTAAG	1 cut(s)	334
MspI	CCGG	4 cut(s)	380, 911, 1164, 1169
MspR9I	CCNGG	2 cut(s)	464, 965
MunI	CAATTG	1 cut(s)	476
MvaI	CCWGG	2 cut(s)	464, 965
MvnI	CGCG	2 cut(s)	756, 1154
NdeI	CATATG	1 cut(s)	1233
NdeII	GATC	4 cut(s)	657, 709, 875, 932
NlaIII	CATG	5 cut(s)	19, 25, 352, 734, 738
NlaIV	GGNNCC	2 cut(s)	906, 915
NmeAIII	GCCGAG	1 cut(s)	1135
NmuCI	GTSAC	1 cut(s)	307
NsbI	TGCGCA	1 cut(s)	20
NsiI	ATGCAT	1 cut(s)	736
NspI	RCATGY	4 cut(s)	19, 25, 734, 738
OliI	CACNNNNGTG	1 cut(s)	779
PaeI	GCATGC	3 cut(s)	19, 25, 738
PaeR7I	CTCGAG	1 cut(s)	988
PcsI	WCGNNNNNNNCGW	1 cut(s)	407
PfeI	GAWTC	2 cut(s)	67, 520
PinAI	ACCGGT	1 cut(s)	1168
PleI	GAGTC	1 cut(s)	146
PpsI	GAGTC	1 cut(s)	146
PshBI	ATTAAT	1 cut(s)	303
Psp124BI	GAGCTC	1 cut(s)	724
Psp1406I	AACGTT	2 cut(s)	93, 410
Psp6I	CCWGG	2 cut(s)	462, 963
PspFI	CCCAGC	1 cut(s)	698
PspGI	CCWGG	2 cut(s)	462, 963
PspN4I	GGNNCC	2 cut(s)	906, 915
PspPI	GGNCC	1 cut(s)	1166
PspXI	VCTCGAGB	1 cut(s)	988
PsrI	GAACNNNNNNTAC	2 cut(s)	930, 962
PstI	CTGCAG	1 cut(s)	14
PsuI	RGATCY	3 cut(s)	657, 709, 875
PvuII	CAGCTG	1 cut(s)	107
RsaI	GTAC	3 cut(s)	400, 685, 884
RsaNI	GTAC	3 cut(s)	399, 684, 883
RseI	CAYNNNNRTG	4 cut(s)	20, 303, 347, 779
Rsr2I	CGGWCCG	1 cut(s)	1166
RsrII	CGGWCCG	1 cut(s)	1166
SacI	GAGCTC	1 cut(s)	724
SaqAI	TTAA	6 cut(s)	90, 290, 303, 335, 627, 759
Sau3AI	GATC	4 cut(s)	657, 709, 875, 932
Sau96I	GGNCC	1 cut(s)	1166
ScaI	AGTACT	1 cut(s)	884
SchI	GAGTC	1 cut(s)	146
ScrFI	CCNGG	2 cut(s)	464, 965
SduI	GDGCHC	3 cut(s)	724, 788, 987
SexAI	ACCWGGT	1 cut(s)	963
SfaNI	GCATC	1 cut(s)	342
SfcI	CTRYAG	1 cut(s)	10
Sfr274I	CTCGAG	1 cut(s)	988
SinI	GGWCC	1 cut(s)	1166
SlaI	CTCGAG	1 cut(s)	988
SmiMI	CAYNNNNRTG	4 cut(s)	20, 303, 347, 779
SmlI	CTYRAG	5 cut(s)	140, 158, 334, 670, 988
SmoI	CTYRAG	5 cut(s)	140, 158, 334, 670, 988
SphI	GCATGC	3 cut(s)	19, 25, 738
Sse9I	AATT	8 cut(s)	184, 226, 361, 431, 476, 578, 795, 840
SsiI	CCGC	8 cut(s)	7, 25, 294, 789, 836, 1107, 1125, 1152
SstI	GAGCTC	1 cut(s)	724
StyD4I	CCNGG	2 cut(s)	462, 963
StyI	CCWWGG	1 cut(s)	540
TaaI	ACNGT	1 cut(s)	622
TaiI	ACGT	4 cut(s)	96, 404, 413, 865
TaqI	TCGA	2 cut(s)	613, 989
TasI	AATT	8 cut(s)	184, 226, 361, 431, 476, 578, 795, 840
TatI	WGTACW	2 cut(s)	683, 882
TauI	GCSGC	5 cut(s)	28, 297, 839, 1128, 1154
TfiI	GAWTC	2 cut(s)	67, 520
Tru1I	TTAA	6 cut(s)	90, 290, 303, 335, 627, 759
Tru9I	TTAA	6 cut(s)	90, 290, 303, 335, 627, 759
TscAI	CASTG	1 cut(s)	1027
TseFI	GTSAC	1 cut(s)	307
TseI	GCWGC	9 cut(s)	9, 12, 30, 107, 271, 322, 1122, 1128, 1156
Tsp45I	GTSAC	1 cut(s)	307
TspDTI	ATGAA	5 cut(s)	74, 479, 485, 838, 1214
TspGWI	ACGGA	1 cut(s)	195
TspRI	CASTG	1 cut(s)	1027
Vha464I	CTTAAG	1 cut(s)	334
VpaK11BI	GGWCC	1 cut(s)	1166
VspI	ATTAAT	1 cut(s)	303
XapI	RAATTY	2 cut(s)	431, 578
XceI	RCATGY	4 cut(s)	19, 25, 734, 738
XcmI	CCANNNNNNNNNTGG	2 cut(s)	612, 643
XhoI	CTCGAG	1 cut(s)	988
ZraI	GACGTC	1 cut(s)	863
ZrmI	AGTACT	1 cut(s)	884
Zsp2I	ATGCAT	1 cut(s)	736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.