Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0009804

Physical Location & Seq

Genomic Coordinates Forward (+)

5470933 .. 5474307

Gene Structure 3375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g06060.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGAAACGCAGCAAGATGTCTCGCTGCGTGCGGTGCAGCGTGCATTGGACATTGTTTGCTCAATGTTCTTTGCTTCTTCTCGTTCTGTTTCATATTAACGTCGCCTCCTCAGCCGCAGTAACCCCGCCACCGGACATCGCTGACGTCCTCCTCAAGTTCAAGGAGTCACTCAAGGTTAGTGGTGATGATGCGCTGAAGAGTTGGGTGAAAAACACTCTTCCGTGCGGTACGAATGCCAAAGCCAAAGCCAAAGAGGGGAATTGGGCCGGCGTTCTTTGTGACAGGGGAAAGCTTTGGGGCTTGCTGCTGGACAAAATGGGGTTAAGCGGCGACATTAATGTCACAGCACTCGCCGAGCTTCCAGACTTGATAAGCGTAAGCATCATGAACAATAACTTCGAGGGTACGATGCCGGAGTGGAATAAAGTTAGTTTGTTGAAAACGTTGTATATGTCTGATAACAAATTCTCCGGGGAGATTCCGGCCGATAGGTTCGAGGGAATGAAGGCATTGAAAAAGCTTCATATGGCGAATAACCAGTTGTCGGGTGAGATTCCAAAGTCGTTGACATCCTTGAAAAGGCTGGCGGTGCTGACCCTTGACGGGAACAACTTTACAGGCAAAATACCAGATTTTGAACATGCTAATTTGAAAGAGTTTAATGTCTCCAGAAACAACTTGGAGGGTGAGATCCCACACATCTTTAAGGCCTTGGATCCAAACAACTTTCAAGGGAATAAAGATCTGTGTGGAGCTCCTTTACATCCATGCTCAGCTCCGACCAAACACGTTAATACAGCGAAGCCCAATGGTGCTCACACCGCCCTGATTGTGATTATGAGTCTCATAGCAGTCATATCCATCTGTGCGGCAATCTTCTTCGTCGTCGTTAGACGTCGCAACAAAGAAGCCGAATACTTATCATCAAATATAGAGTCTCCACCGGCATCATCGGTCCAGAACAGATCAGTAGCTGTAGCTCCGAAAGAACCAGAACCAGACCAAGTTAGCCAAACATCAGAGCACTCGACTAAAAGCGAAAGAGCAGCAGCAGCAGGAAGTAGTGGCGGGAAGAAGGGTGATAGCTTGAAGCTCTCATTCGTCCGAGACGACAGGCAAAGGTTTGATATGCAAGACTTGCTTAAAGCCTCGGCCGAGGTGTTGGGAAGCGGCAGCTTTGGGTCTTCTTACAAGGCGGCGCTGCTGACTGGACCGGTGATGGTTGTGAAGAGGTATAAGCAAATGAACAGTGTGGGAAGAGAGGAGTTCCAAGAGCATATGAGGAGACTAGGGAGATTAGGACACCCTAATTTGCTTCCACTTGTGGCTTATTACTATAAGAAAGAAGAGAAGCTCTTGATCACCGACCATGTTGCCAAGGGCAGCTTGGCTGTTCATCTTCATGGACACCAGAACCAAGATCAACCAAGCCTTGACTGGCCAAAACGTTTGAAGATTGTGAAAGGCGTAGCACAAGGGTTGAAGTACCTCTACAATGAGCTGCCGAGCCTAATCACACCCCATGGCCACCTAAAATCCTCGAACGTTCTTCTCAGCGAAACCTACGAACCCCTCATCACCGACTACGGCCTAATCCCCATAGTGAATCCAGAGCATGCTCAAACCCTAATGGTGGCATACAAGTCCCCAGAGTACGTCGCAACGAAGCGGATCACAAAGAAGACCGATGTATGGAGCCTCGGTGTGCTCATCTTGGAGATCCTAACAGGGAAGTTGCCAACCAACTTTCTGCAACATGGTAAGGGAAGTGAGGAGGACCTGGCGAGCTGGGTGAACTCGGTGCCTAAAGAGGAGTGGTTCACGCAGGTGTTCGATAGGGAAATGAATGCAAGCAAGAACTGCGAGGGGGAGATGCTGAAGCTCTTGAAGCTTGGGTTGGAATGTTGCGAAGGTGATGTGGAGAAGAGGTGGGATTTGAAGGAGGCTGTTGGGAGGATTGAAGAGTTGAAAGAAGTTGGTAATAGTGGTGGTGGTGGCGGTAGCGGCGGCAGTCCGGATGTGGATTTTCTCTCTTCTTCCACTAGTGAAGTTGACATCATGAAGTTGGCGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016324 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0036211 GO:0040007 GO:0040008 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080092 GO:0090406 GO:0098590 GO:0120025 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

692

Amino Acids

75.91

Weight (kDa)

8.52

Isoelectric Point (pI)

33.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	123 - 181	1e-05	Leucine rich repeat
LRR_8	PF13855	146 - 205	7.6e-08	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	386 - 650	1.1e-30	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	386 - 650	8.4e-30	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07040 AT5G35390
fragaria_vesca	FvH4_4g06060 FvH4_5g22250
malus_domestica	MD13G1232600.v1.1 MD16G1238200.v1.1
prunus_persica	Prupe.1G064100_v2.0.a1
pyrus_communis	pycom13g20500 pycom13g20530
rosa_chinensis	RchiOBHm_Chr4g0397621
rosa_laevigata	RLG00000009423
rosa_multiflora	Rmu_co8327933.1_g000001 Rmu_sc0002729.1_g000002 Rmu_sc0005653.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342430
rosa_rugosa	Rorug03G0342300
rosa_samantha	Rh4AG079400 Rh4BG077300 Rh4CG085000 Rh4DG072400
rosa_wichuraiana	Rw4G006500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1816
AasI	GACNNNNNNGTC	1 cut(s)	338
AatII	GACGTC	2 cut(s)	147, 898
Acc36I	ACCTGC	1 cut(s)	1816
AccB1I	GGYRCC	1 cut(s)	1801
AccIII	TCCGGA	1 cut(s)	2014
AclI	AACGTT	3 cut(s)	443, 1447, 1545
AclWI	GGATC	5 cut(s)	685, 710, 723, 1679, 1714
AcoI	YGGCCR	4 cut(s)	483, 1152, 1439, 1525
AcsI	RAATTY	1 cut(s)	464
AcuI	CTGAAG	2 cut(s)	215, 1898
AcyI	GRCGYC	2 cut(s)	144, 895
AfaI	GTAC	4 cut(s)	229, 406, 1487, 1655
AfiI	CCNNNNNNNGG	7 cut(s)	130, 255, 544, 579, 603, 1633, 1692
AflIII	ACRYGT	1 cut(s)	787
AgeI	ACCGGT	1 cut(s)	1213
AhlI	ACTAGT	1 cut(s)	2042
AjnI	CCWGG	1 cut(s)	1779
AjuI	GAANNNNNNNTTGG	2 cut(s)	1880, 1912
AleI	CACNNNNGTG	1 cut(s)	1826
Alw21I	GWGCWC	4 cut(s)	757, 817, 1026, 1710
Alw26I	GTCTC	6 cut(s)	24, 670, 848, 942, 1101, 1279
AlwI	GGATC	5 cut(s)	685, 710, 723, 1679, 1714
AlwNI	CAGNNNCTG	1 cut(s)	974
Aor13HI	TCCGGA	1 cut(s)	2014
AoxI	GGCC	7 cut(s)	264, 483, 708, 1152, 1439, 1525, 1588
ApoI	RAATTY	1 cut(s)	464
ArsI	GACNNNNNNTTYG	2 cut(s)	920, 952
AseI	ATTAAT	1 cut(s)	336
AsiGI	ACCGGT	1 cut(s)	1213
AspLEI	GCGC	2 cut(s)	193, 1201
AspS9I	GGNCC	4 cut(s)	264, 955, 1211, 1777
AsuC2I	CCSGG	1 cut(s)	472
AvaII	GGWCC	3 cut(s)	955, 1211, 1777
BalI	TGGCCA	2 cut(s)	1441, 1527
BamHI	GGATCC	1 cut(s)	715
BanI	GGYRCC	1 cut(s)	1801
BanII	GRGCYC	1 cut(s)	757
BarI	GAAGNNNNNNTAC	2 cut(s)	1475, 1507
BbsI	GAAGAC	2 cut(s)	1176, 1688
Bbv12I	GWGCWC	4 cut(s)	757, 817, 1026, 1710
BbvCI	CCTCAGC	1 cut(s)	109
BccI	CCATC	2 cut(s)	869, 1213
BceAI	ACGGC	1 cut(s)	1603
BcgI	CGANNNNNNTGC	2 cut(s)	1355, 1389
BciT130I	CCWGG	1 cut(s)	1781
BclI	TGATCA	1 cut(s)	1359
BcnI	CCSGG	1 cut(s)	472
BcoDI	GTCTC	6 cut(s)	24, 670, 848, 942, 1101, 1279
BcuI	ACTAGT	1 cut(s)	2042
BfaI	CTAG	2 cut(s)	1289, 2043
BfmI	CTRYAG	1 cut(s)	975
BfoI	RGCGCY	1 cut(s)	1202
BfuAI	ACCTGC	1 cut(s)	1816
BglII	AGATCT	1 cut(s)	742
BlpI	GCTNAGC	1 cut(s)	772
Bme1390I	CCNGG	2 cut(s)	472, 1781
Bme18I	GGWCC	3 cut(s)	955, 1211, 1777
BmgT120I	GGNCC	4 cut(s)	264, 955, 1211, 1777
BmiI	GGNNCC	3 cut(s)	717, 1697, 1803
BmrFI	CCNGG	2 cut(s)	472, 1781
BmsI	GCATC	5 cut(s)	178, 390, 399, 956, 1863
BpiI	GAAGAC	2 cut(s)	1176, 1688
BpmI	CTGGAG	1 cut(s)	652
Bpu10I	CCTNAGC	1 cut(s)	109
Bpu1102I	GCTNAGC	1 cut(s)	772
BpuEI	CTTGAG	2 cut(s)	137, 155
BpuMI	CCSGG	1 cut(s)	472
BsaHI	GRCGYC	2 cut(s)	144, 895
BsaJI	CCNNGG	7 cut(s)	471, 711, 1149, 1155, 1377, 1522, 1699
BsaWI	WCCGGW	3 cut(s)	130, 1213, 2014
BsaXI	ACNNNNNCTCC	8 cut(s)	89, 119, 452, 482, 1687, 1717, 1913, 1943
Bsc4I	CCNNNNNNNGG	7 cut(s)	130, 255, 544, 579, 603, 1633, 1692
Bse118I	RCCGGY	3 cut(s)	266, 943, 1213
Bse1I	ACTGG	3 cut(s)	538, 1213, 1442
BseAI	TCCGGA	1 cut(s)	2014
BseBI	CCWGG	1 cut(s)	1781
BseDI	CCNNGG	7 cut(s)	471, 711, 1149, 1155, 1377, 1522, 1699
BseGI	GGATG	3 cut(s)	569, 763, 2023
BseLI	CCNNNNNNNGG	7 cut(s)	130, 255, 544, 579, 603, 1633, 1692
BseMII	CTCAG	3 cut(s)	123, 786, 1567
BseNI	ACTGG	3 cut(s)	538, 1213, 1442
BseRI	GAGGAG	6 cut(s)	97, 140, 1277, 1297, 1787, 1826
BseX3I	CGGCCG	2 cut(s)	483, 1152
BseYI	CCCAGC	1 cut(s)	1788
BsgI	GTGCAG	1 cut(s)	55
Bsh1285I	CGRYCG	2 cut(s)	486, 1155
BshFI	GGCC	7 cut(s)	266, 485, 710, 1154, 1441, 1527, 1590
BshNI	GGYRCC	1 cut(s)	1801
BshTI	ACCGGT	1 cut(s)	1213
BsiEI	CGRYCG	2 cut(s)	486, 1155
BsiHKAI	GWGCWC	4 cut(s)	757, 817, 1026, 1710
BsiSI	CCGG	8 cut(s)	131, 267, 413, 471, 482, 944, 1214, 2015
BslFI	GGGAC	1 cut(s)	1630
BslI	CCNNNNNNNGG	7 cut(s)	130, 255, 544, 579, 603, 1633, 1692
BsmAI	GTCTC	6 cut(s)	24, 670, 848, 942, 1101, 1279
BsmBI	CGTCTC	1 cut(s)	1101
BsmFI	GGGAC	1 cut(s)	1630
BsmI	GAATGC	2 cut(s)	238, 1852
BsnI	GGCC	7 cut(s)	266, 485, 710, 1154, 1441, 1527, 1590
Bsp1286I	GDGCHC	4 cut(s)	757, 817, 1026, 1710
Bsp13I	TCCGGA	1 cut(s)	2014
Bsp143I	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
Bsp1720I	GCTNAGC	1 cut(s)	772
Bsp19I	CCATGG	1 cut(s)	1522
BspANI	GGCC	7 cut(s)	266, 485, 710, 1154, 1441, 1527, 1590
BspCNI	CTCAG	3 cut(s)	122, 785, 1566
BspEI	TCCGGA	1 cut(s)	2014
BspHI	TCATGA	2 cut(s)	384, 2058
BspLI	GGNNCC	3 cut(s)	717, 1697, 1803
BspMI	ACCTGC	1 cut(s)	1816
BspPI	GGATC	5 cut(s)	685, 710, 723, 1679, 1714
BspT107I	GGYRCC	1 cut(s)	1801
BsrFI	RCCGGY	3 cut(s)	266, 943, 1213
BsrI	ACTGG	3 cut(s)	538, 1213, 1442
BssAI	RCCGGY	3 cut(s)	266, 943, 1213
BssECI	CCNNGG	7 cut(s)	471, 711, 1149, 1155, 1377, 1522, 1699
BssMI	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
BssNI	GRCGYC	2 cut(s)	144, 895
BssT1I	CCWWGG	3 cut(s)	711, 1377, 1522
Bst2UI	CCWGG	1 cut(s)	1781
Bst4CI	ACNGT	1 cut(s)	1250
Bst6I	CTCTTC	8 cut(s)	191, 222, 1223, 1252, 1341, 1919, 1956, 2038
BstACI	GRCGYC	2 cut(s)	144, 895
BstAPI	GCANNNNNTGC	2 cut(s)	1138, 1860
BstC8I	GCNNGC	8 cut(s)	29, 41, 268, 302, 585, 1617, 1786, 1852
BstDEI	CTNAG	3 cut(s)	109, 772, 1553
BstDSI	CCRYGG	1 cut(s)	1522
BstENI	CCTNNNNNAGG	1 cut(s)	577
BstF5I	GGATG	3 cut(s)	569, 763, 2023
BstH2I	RGCGCY	1 cut(s)	1202
BstHHI	GCGC	2 cut(s)	193, 1201
BstKTI	GATC	8 cut(s)	693, 718, 745, 968, 1362, 1423, 1674, 1722
BstMAI	GTCTC	6 cut(s)	24, 670, 848, 942, 1101, 1279
BstMBI	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
BstMCI	CGRYCG	2 cut(s)	486, 1155
BstMWI	GCNNNNNNNGC	9 cut(s)	33, 110, 589, 821, 1052, 1138, 1860, 1888, 2004
BstNI	CCWGG	1 cut(s)	1781
BstNSI	RCATGY	2 cut(s)	644, 1619
BstSCI	CCNGG	2 cut(s)	470, 1779
BstSFI	CTRYAG	1 cut(s)	975
BstV2I	GAAGAC	2 cut(s)	1176, 1688
BstX2I	RGATCY	4 cut(s)	690, 715, 742, 1719
BstYI	RGATCY	4 cut(s)	690, 715, 742, 1719
BstZI	CGGCCG	2 cut(s)	483, 1152
BsuRI	GGCC	7 cut(s)	266, 485, 710, 1154, 1441, 1527, 1590
BtgI	CCRYGG	1 cut(s)	1522
BtgZI	GCGATG	1 cut(s)	121
BtsCI	GGATG	3 cut(s)	569, 763, 2023
BtsIMutI	CAGTG	1 cut(s)	1255
BveI	ACCTGC	1 cut(s)	1816
Cac8I	GCNNGC	8 cut(s)	29, 41, 268, 302, 585, 1617, 1786, 1852
CaiI	CAGNNNCTG	1 cut(s)	974
CciI	TCATGA	2 cut(s)	384, 2058
CfoI	GCGC	2 cut(s)	193, 1201
Cfr10I	RCCGGY	3 cut(s)	266, 943, 1213
Cfr13I	GGNCC	4 cut(s)	264, 955, 1211, 1777
Csp6I	GTAC	4 cut(s)	228, 405, 1486, 1654
CspAI	ACCGGT	1 cut(s)	1213
CspCI	CAANNNNNGTGG	2 cut(s)	160, 195
CviAII	CATG	9 cut(s)	385, 641, 768, 1370, 1403, 1523, 1616, 1757, 2059
CviQI	GTAC	4 cut(s)	228, 405, 1486, 1654
DdeI	CTNAG	3 cut(s)	109, 772, 1553
DpnI	GATC	8 cut(s)	692, 717, 744, 967, 1361, 1422, 1673, 1721
DpnII	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
DrdI	GACNNNNNNGTC	1 cut(s)	338
DseDI	GACNNNNNNGTC	1 cut(s)	338
EaeI	YGGCCR	4 cut(s)	483, 1152, 1439, 1525
EagI	CGGCCG	2 cut(s)	483, 1152
Eam1104I	CTCTTC	8 cut(s)	191, 222, 1223, 1252, 1341, 1919, 1956, 2038
EarI	CTCTTC	8 cut(s)	191, 222, 1223, 1252, 1341, 1919, 1956, 2038
Ecl136II	GAGCTC	1 cut(s)	755
EclXI	CGGCCG	2 cut(s)	483, 1152
Eco130I	CCWWGG	3 cut(s)	711, 1377, 1522
Eco147I	AGGCCT	1 cut(s)	710
Eco24I	GRGCYC	1 cut(s)	757
Eco47I	GGWCC	3 cut(s)	955, 1211, 1777
Eco52I	CGGCCG	2 cut(s)	483, 1152
Eco53kI	GAGCTC	1 cut(s)	755
Eco57I	CTGAAG	2 cut(s)	215, 1898
EcoICRI	GAGCTC	1 cut(s)	755
EcoNI	CCTNNNNNAGG	1 cut(s)	577
EcoO109I	RGGNCCY	1 cut(s)	1777
EcoRII	CCWGG	1 cut(s)	1779
EcoT14I	CCWWGG	3 cut(s)	711, 1377, 1522
EcoT38I	GRGCYC	1 cut(s)	757
ErhI	CCWWGG	3 cut(s)	711, 1377, 1522
Esp3I	CGTCTC	1 cut(s)	1101
FaeI	CATG	9 cut(s)	388, 644, 771, 1373, 1406, 1526, 1619, 1760, 2062
FalI	AAGNNNNNCTT	4 cut(s)	1125, 1157, 1370, 1402
FaqI	GGGAC	1 cut(s)	1630
FatI	CATG	9 cut(s)	384, 640, 767, 1369, 1402, 1522, 1615, 1756, 2058
FauI	CCCGC	2 cut(s)	132, 1061
FauNDI	CATATG	2 cut(s)	525, 1278
FbaI	TGATCA	1 cut(s)	1359
FokI	GGATG	3 cut(s)	556, 750, 2030
FriOI	GRGCYC	1 cut(s)	757
FspBI	CTAG	2 cut(s)	1289, 2043
GlaI	GCGC	2 cut(s)	192, 1200
GsaI	CCCAGC	1 cut(s)	1792
GsuI	CTGGAG	1 cut(s)	652
HaeII	RGCGCY	1 cut(s)	1202
HaeIII	GGCC	7 cut(s)	266, 485, 710, 1154, 1441, 1527, 1590
HapII	CCGG	8 cut(s)	131, 267, 413, 471, 482, 944, 1214, 2015
HhaI	GCGC	2 cut(s)	193, 1201
Hin1I	GRCGYC	2 cut(s)	144, 895
Hin1II	CATG	9 cut(s)	388, 644, 771, 1373, 1406, 1526, 1619, 1760, 2062
Hin6I	GCGC	2 cut(s)	191, 1199
HinP1I	GCGC	2 cut(s)	191, 1199
HincII	GTYRAC	2 cut(s)	567, 2053
HindII	GTYRAC	2 cut(s)	567, 2053
HindIII	AAGCTT	3 cut(s)	290, 518, 1889
HinfI	GANTC	6 cut(s)	164, 478, 553, 841, 935, 1606
HpaII	CCGG	8 cut(s)	131, 267, 413, 471, 482, 944, 1214, 2015
Hpy166II	GTNNAC	4 cut(s)	567, 1795, 1821, 2053
Hpy188I	TCNGA	5 cut(s)	457, 780, 984, 1021, 1106
Hpy188III	TCNNGA	9 cut(s)	362, 385, 669, 958, 1357, 1610, 1885, 2015, 2059
Hpy8I	GTNNAC	4 cut(s)	567, 1795, 1821, 2053
Hpy99I	CGWCG	5 cut(s)	104, 887, 890, 900, 1661
HpyAV	CCTTC	4 cut(s)	499, 1069, 1904, 1933
HpyCH4III	ACNGT	1 cut(s)	1250
HpyCH4IV	ACGT	8 cut(s)	99, 144, 443, 789, 895, 1447, 1545, 1656
HpyCH4V	TGCA	5 cut(s)	36, 43, 1132, 1753, 1850
HpyF10VI	GCNNNNNNNGC	9 cut(s)	33, 110, 589, 821, 1052, 1138, 1860, 1888, 2004
HpyF3I	CTNAG	3 cut(s)	109, 772, 1553
HpySE526I	ACGT	8 cut(s)	99, 144, 443, 789, 895, 1447, 1545, 1656
Hsp92I	GRCGYC	2 cut(s)	144, 895
Hsp92II	CATG	9 cut(s)	388, 644, 771, 1373, 1406, 1526, 1619, 1760, 2062
HspAI	GCGC	2 cut(s)	191, 1199
Kpn2I	TCCGGA	1 cut(s)	2014
KroI	GCCGGC	1 cut(s)	266
KroNI	GCCGGC	1 cut(s)	268
Ksp22I	TGATCA	1 cut(s)	1359
Kzo9I	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
LmnI	GCTCC	5 cut(s)	752, 760, 781, 985, 1695
LweI	GCATC	5 cut(s)	178, 390, 399, 956, 1863
MaeI	CTAG	2 cut(s)	1289, 2043
MaeII	ACGT	8 cut(s)	99, 144, 443, 789, 895, 1447, 1545, 1656
MaeIII	GTNAC	4 cut(s)	118, 165, 278, 340
MalI	GATC	8 cut(s)	692, 717, 744, 967, 1361, 1422, 1673, 1721
MboI	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
MflI	RGATCY	4 cut(s)	690, 715, 742, 1719
MhlI	GDGCHC	4 cut(s)	757, 817, 1026, 1710
MlsI	TGGCCA	2 cut(s)	1441, 1527
MluCI	AATT	4 cut(s)	259, 464, 646, 1309
MluNI	TGGCCA	2 cut(s)	1441, 1527
MlyI	GAGTC	3 cut(s)	173, 850, 944
MmeI	TCCRAC	2 cut(s)	803, 1878
Mox20I	TGGCCA	2 cut(s)	1441, 1527
MroI	TCCGGA	1 cut(s)	2014
MroNI	GCCGGC	1 cut(s)	266
MscI	TGGCCA	2 cut(s)	1441, 1527
MseI	TTAA	7 cut(s)	96, 323, 336, 660, 705, 792, 1143
MslI	CAYNNNNRTG	2 cut(s)	1401, 1826
Msp20I	TGGCCA	2 cut(s)	1441, 1527
MspI	CCGG	8 cut(s)	131, 267, 413, 471, 482, 944, 1214, 2015
MspR9I	CCNGG	2 cut(s)	472, 1781
Mva1269I	GAATGC	2 cut(s)	238, 1852
MvaI	CCWGG	1 cut(s)	1781
MwoI	GCNNNNNNNGC	9 cut(s)	33, 110, 589, 821, 1052, 1138, 1860, 1888, 2004
NaeI	GCCGGC	1 cut(s)	268
NciI	CCSGG	1 cut(s)	472
NcoI	CCATGG	1 cut(s)	1522
NdeI	CATATG	2 cut(s)	525, 1278
NdeII	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
NgoMIV	GCCGGC	1 cut(s)	266
NlaIII	CATG	9 cut(s)	388, 644, 771, 1373, 1406, 1526, 1619, 1760, 2062
NlaIV	GGNNCC	3 cut(s)	717, 1697, 1803
NmeAIII	GCCGAG	4 cut(s)	379, 1130, 1180, 1530
NmuCI	GTSAC	3 cut(s)	165, 278, 340
NspI	RCATGY	2 cut(s)	644, 1619
OliI	CACNNNNGTG	1 cut(s)	1826
PaeI	GCATGC	1 cut(s)	1619
PagI	TCATGA	2 cut(s)	384, 2058
PaqCI	CACCTGC	1 cut(s)	1816
PceI	AGGCCT	1 cut(s)	710
PcsI	WCGNNNNNNNCGW	1 cut(s)	1107
PctI	GAATGC	2 cut(s)	238, 1852
PdiI	GCCGGC	1 cut(s)	268
PfeI	GAWTC	3 cut(s)	478, 553, 1606
PinAI	ACCGGT	1 cut(s)	1213
PleI	GAGTC	3 cut(s)	172, 849, 943
PpsI	GAGTC	3 cut(s)	172, 849, 943
PpuMI	RGGWCCY	1 cut(s)	1777
PshBI	ATTAAT	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	757
Psp1406I	AACGTT	3 cut(s)	443, 1447, 1545
Psp5II	RGGWCCY	1 cut(s)	1777
Psp6I	CCWGG	1 cut(s)	1779
PspFI	CCCAGC	1 cut(s)	1788
PspGI	CCWGG	1 cut(s)	1779
PspN4I	GGNNCC	3 cut(s)	717, 1697, 1803
PspPI	GGNCC	4 cut(s)	264, 955, 1211, 1777
PspPPI	RGGWCCY	1 cut(s)	1777
PstNI	CAGNNNCTG	1 cut(s)	974
PsuI	RGATCY	4 cut(s)	690, 715, 742, 1719
RsaI	GTAC	4 cut(s)	229, 406, 1487, 1655
RsaNI	GTAC	4 cut(s)	228, 405, 1486, 1654
RseI	CAYNNNNRTG	2 cut(s)	1401, 1826
SacI	GAGCTC	1 cut(s)	757
SaqAI	TTAA	7 cut(s)	96, 323, 336, 660, 705, 792, 1143
Sau3AI	GATC	8 cut(s)	690, 715, 742, 965, 1359, 1420, 1671, 1719
Sau96I	GGNCC	4 cut(s)	264, 955, 1211, 1777
SchI	GAGTC	3 cut(s)	173, 850, 944
ScrFI	CCNGG	2 cut(s)	472, 1781
SduI	GDGCHC	4 cut(s)	757, 817, 1026, 1710
SfaNI	GCATC	5 cut(s)	178, 390, 399, 956, 1863
SfcI	CTRYAG	1 cut(s)	975
SinI	GGWCC	3 cut(s)	955, 1211, 1777
SmiMI	CAYNNNNRTG	2 cut(s)	1401, 1826
SmlI	CTYRAG	2 cut(s)	152, 170
SmoI	CTYRAG	2 cut(s)	152, 170
SpeI	ACTAGT	1 cut(s)	2042
SphI	GCATGC	1 cut(s)	1619
Sse9I	AATT	4 cut(s)	259, 464, 646, 1309
SseBI	AGGCCT	1 cut(s)	710
SspMI	CTAG	2 cut(s)	1289, 2043
SstI	GAGCTC	1 cut(s)	757
StuI	AGGCCT	1 cut(s)	710
StyD4I	CCNGG	2 cut(s)	470, 1779
StyI	CCWWGG	3 cut(s)	711, 1377, 1522
TaaI	ACNGT	1 cut(s)	1250
TaiI	ACGT	8 cut(s)	102, 147, 446, 792, 898, 1450, 1548, 1659
TaqI	TCGA	5 cut(s)	399, 495, 1028, 1541, 1833
TaqII	GACCGA	2 cut(s)	943, 1700
TasI	AATT	4 cut(s)	259, 464, 646, 1309
TauI	GCSGC	7 cut(s)	116, 330, 872, 1173, 1199, 2007, 2010
TfiI	GAWTC	3 cut(s)	478, 553, 1606
Tru1I	TTAA	7 cut(s)	96, 323, 336, 660, 705, 792, 1143
Tru9I	TTAA	7 cut(s)	96, 323, 336, 660, 705, 792, 1143
TscAI	CASTG	1 cut(s)	1255
TseFI	GTSAC	3 cut(s)	165, 278, 340
Tsp45I	GTSAC	3 cut(s)	165, 278, 340
TspGWI	ACGGA	1 cut(s)	210
TspRI	CASTG	1 cut(s)	1255
VpaK11BI	GGWCC	3 cut(s)	955, 1211, 1777
VspI	ATTAAT	1 cut(s)	336
XagI	CCTNNNNNAGG	1 cut(s)	577
XapI	RAATTY	1 cut(s)	464
XceI	RCATGY	2 cut(s)	644, 1619
XcmI	CCANNNNNNNNNTGG	3 cut(s)	676, 1384, 1434
XspI	CTAG	2 cut(s)	1289, 2043
ZraI	GACGTC	2 cut(s)	145, 896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.