Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0009804

Physical Location & Seq

Genomic Coordinates Forward (+)

23171215 .. 23175082

Gene Structure 3868 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1232600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGATGATGATGATGAAGAAGCAGTGCGAATCATCATCGTTAATGTTGCCTCGTGCTCTTGCTTTCTTCTTCGTTTTGTTATATGTTTGTGTTGCCTCTCCTGCGGGGGCTTCTGAATCCGAAACTCTCCTCAAGCTTAAGGATTCCTTACAAAACACCGACGGATTAACCACTTGGACACCATTGACCAGTCCCTGCACCGCCCAAAAGCCGAACTGGATGGGTATTCATTGTGATCGAAGGGGGAGAGTTTGGGCTTTGCAGCTTGAGAATATGGGGCTCAAGGGTGAAATCAATGTGGGCTTGCTCCAGGACCTGCCTGACTTAAGAACCATAGGCTTTATGAATAACAGTTTTGAGGGTCCATTGCCTGATTTGAGGAAAATTATCGGATTAAAAACTGTCTACCTGACGGGTAATAAATTCTCTGGCACGATTCCTTCAGATTGGTTCGCAGGAATGTCATCGTTGAAGAAGCTCCACATGGCGAATAATCAGTTTACGGGAGAGATTCCGAAGTCGTTGGCAGGGTTGGATAAGCTGCTGGAGCTGAGTATTGAAGGGAACAAATTCGAAGGCAAGATACCAGATTTTAGGCAGCCCAGGTTGACAATATTTAACGTCTCCAACAACAAACTGGAGGGTGAGATCCCGAAAAGCCTAAGAAAATTGGATGCAAGCTCCTTTGCAGGGAATGAAGACCTATGTGGAGGGCCATTAAAAGCATGCAGTACCCCCTCGAAGAAGCCCGCAACCTGGATAATCGTGCTGATTGTGATCGCTGTCATAGTAGCAATCATCGCCATAATTGCTTTACTGGTCTTCCTCCTTGGACGCCGCAAAAAAACATCTGAATCATCGGTAGAGGCTCCACCACCATCAACAGCAACTGTCCAAAACAGAGCAGTTCAAAAAGAACCTGAGCACCAAGCAAGTGCTCCAGGCTCACCTGAAAACTCGATTAAAGGAGGGAATGGAAAGAAGGGTGAACAGAGCTTAAAGCTTTCATTTGTGAGAGACGACAGGGAGAGGTTTGATATGCAAGACTTGCTGAGAGCCTCGGCGGAGGTGTTAGGCAGCGGTTGCTTTGGGTCATCTTACAAGGCTGCTTTGTTGACCGGACCAGTGATGGTTGTGAAGAGGTATAAGCAGATGAATAATGTAGGAAGAGAGGAGTTCATAGAGCACATGAGAAGGATTGGGAGATTGGGACATCCTAATTTGCTTCCACTTGTTGCTTATTATTATAAGAAGGAAGAGAAGCTCTTGATTTCTGACCATGTTCTAAACGGCAGCTTGGCTGCTCATCTTCATGGAAACCAAACCCTAGACCATCCAAGCCTTGACTGGCCGACCCGTTTGAAGATTGTCAAAGGAGTAGCCCATGGCTTACGCTATCTCTACACTGAGCTTCCCAGCCTAGTAGCACCCCATGGCCACCTCAAATCCTCAAACGTTCTTCTCAACGAGTCCTACGAGCCCCTTATCACCGACTACGGCCTAATCCCTGTGGTAAACCAAGAACATGCTCACACCCTCATGGTGGCCTACAAGTCCCCAGAGTACATGCAAAGCAAGCGCGTGACAAAGAAGACCGACGTGTGGAGCTTCGGAGTGTTGATCTTAGAGATCTTAACGGGGAAGTTGCCCACCAACTTTTTGCAGCAAGGTAAGGGAAGCGAGGAGGATTTGGCAAGTTGGGTGAACTCGGTGCCTCGGGTGGAGTGGTTTAGTCAGGTGTTTGATACAGGAATGGGGGCAGGCAAGAGTAGTGAGGGAGAGATGCTGAAGCTCTTGAAGATTGGGTTGGAATGTTGTGAAGGTGAAGTGGAGAAGAGACTAGATCTGAAAGAGGTTGTGGAGAGGATTGAAGAGTTGGAGAGGGACAACCCTGGAGATTCAGATTTTTTCTCTACGTGTGCTAGCGAAGGCGACATGATGAAGATCGTTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016324 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0036211 GO:0040007 GO:0040008 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080092 GO:0090406 GO:0098590 GO:0120025 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

652

Amino Acids

72.03

Weight (kDa)

8.16

Isoelectric Point (pI)

34.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	131 - 191	1.1e-09	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	356 - 622	3.1e-29	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	356 - 620	4.6e-27	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07040 AT5G35390
fragaria_vesca	FvH4_4g06060 FvH4_5g22250
malus_domestica	MD13G1232600.v1.1 MD16G1238200.v1.1
prunus_persica	Prupe.1G064100_v2.0.a1
pyrus_communis	pycom13g20500 pycom13g20530
rosa_chinensis	RchiOBHm_Chr4g0397621
rosa_laevigata	RLG00000009423
rosa_multiflora	Rmu_co8327933.1_g000001 Rmu_sc0002729.1_g000002 Rmu_sc0005653.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342430
rosa_rugosa	Rorug03G0342300
rosa_samantha	Rh4AG079400 Rh4BG077300 Rh4CG085000 Rh4DG072400
rosa_wichuraiana	Rw4G006500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1248
Acc36I	ACCTGC	1 cut(s)	324
AccB1I	GGYRCC	1 cut(s)	1711
AccI	GTMKAC	1 cut(s)	405
AccII	CGCG	1 cut(s)	1581
AciI	CCGC	6 cut(s)	104, 201, 750, 838, 1064, 1080
AclI	AACGTT	1 cut(s)	1455
AclWI	GGATC	1 cut(s)	643
AcoI	YGGCCR	2 cut(s)	1349, 1435
AcsI	RAATTY	2 cut(s)	422, 569
AcuI	CTGAAG	2 cut(s)	426, 1808
AcyI	GRCGYC	1 cut(s)	835
AfaI	GTAC	2 cut(s)	733, 1565
AfiI	CCNNNNNNNGG	4 cut(s)	690, 756, 1543, 1602
AflII	CTTAAG	2 cut(s)	137, 325
AflIII	ACRYGT	2 cut(s)	1599, 1916
AgsI	TTSAA	6 cut(s)	472, 560, 911, 1363, 1798, 1871
AjiI	CACGTC	1 cut(s)	1600
AjnI	CCWGG	5 cut(s)	309, 602, 755, 940, 1891
AjuI	GAANNNNNNNTTGG	2 cut(s)	1790, 1822
Alw21I	GWGCWC	4 cut(s)	58, 927, 940, 1188
Alw26I	GTCTC	3 cut(s)	628, 1011, 1831
AlwI	GGATC	1 cut(s)	643
AlwNI	CAGNNNCTG	3 cut(s)	195, 316, 890
Ama87I	CYCGRG	1 cut(s)	1716
AoxI	GGCC	5 cut(s)	713, 1349, 1435, 1498, 1545
ApeKI	GCWGC	8 cut(s)	262, 541, 598, 1077, 1106, 1293, 1301, 1663
ApoI	RAATTY	2 cut(s)	422, 569
Asp700I	GAANNNNTTC	1 cut(s)	569
AspLEI	GCGC	1 cut(s)	1581
AspS9I	GGNCC	4 cut(s)	313, 362, 713, 1121
AsuHPI	GGTGA	7 cut(s)	299, 656, 939, 998, 1480, 1714, 1835
AsuII	TTCGAA	1 cut(s)	573
AsuNHI	GCTAGC	1 cut(s)	1922
AvaI	CYCGRG	1 cut(s)	1716
AvaII	GGWCC	3 cut(s)	313, 362, 1121
BalI	TGGCCA	1 cut(s)	1437
BanI	GGYRCC	1 cut(s)	1711
BanII	GRGCYC	2 cut(s)	282, 1482
BarI	GAAGNNNNNNTAC	2 cut(s)	567, 599
BauI	CACGAG	1 cut(s)	51
BbsI	GAAGAC	3 cut(s)	705, 814, 1598
Bbv12I	GWGCWC	4 cut(s)	58, 927, 940, 1188
BbvI	GCAGC	8 cut(s)	274, 528, 610, 1089, 1093, 1288, 1305, 1675
BccI	CCATC	4 cut(s)	214, 886, 1123, 1341
BceAI	ACGGC	2 cut(s)	1306, 1513
BciT130I	CCWGG	5 cut(s)	311, 604, 757, 942, 1893
BcoDI	GTCTC	3 cut(s)	628, 1011, 1831
BfaI	CTAG	4 cut(s)	1328, 1421, 1841, 1923
BfrI	CTTAAG	2 cut(s)	137, 325
BfuAI	ACCTGC	1 cut(s)	324
BglII	AGATCT	2 cut(s)	1629, 1843
BisI	GCNGC	9 cut(s)	263, 542, 599, 838, 1078, 1107, 1294, 1302, 1664
BlsI	GCNGC	9 cut(s)	264, 543, 600, 839, 1079, 1108, 1295, 1303, 1665
Bme1390I	CCNGG	5 cut(s)	311, 604, 757, 942, 1893
Bme18I	GGWCC	3 cut(s)	313, 362, 1121
BmeT110I	CYCGRG	1 cut(s)	1716
BmgBI	CACGTC	1 cut(s)	1600
BmgT120I	GGNCC	4 cut(s)	313, 362, 713, 1121
BmiI	GGNNCC	3 cut(s)	363, 870, 1713
BmrFI	CCNGG	5 cut(s)	311, 604, 757, 942, 1893
BmsI	GCATC	2 cut(s)	664, 1773
BmtI	GCTAGC	1 cut(s)	1926
BpiI	GAAGAC	3 cut(s)	705, 814, 1598
BpmI	CTGGAG	5 cut(s)	293, 566, 659, 924, 1914
Bpu10I	CCTNAGC	1 cut(s)	921
Bpu14I	TTCGAA	1 cut(s)	573
BpuEI	CTTGAG	3 cut(s)	116, 266, 287
BsaAI	YACGTR	1 cut(s)	1917
BsaBI	GATNNNNATC	2 cut(s)	776, 1943
BsaHI	GRCGYC	1 cut(s)	835
BsaJI	CCNNGG	7 cut(s)	602, 829, 1059, 1384, 1432, 1715, 1891
BsaWI	WCCGGW	1 cut(s)	1118
Bsc4I	CCNNNNNNNGG	4 cut(s)	690, 756, 1543, 1602
Bse1I	ACTGG	6 cut(s)	189, 221, 642, 822, 1124, 1352
Bse3DI	GCAATG	1 cut(s)	365
Bse8I	GATNNNNATC	2 cut(s)	776, 1943
BseBI	CCWGG	5 cut(s)	311, 604, 757, 942, 1893
BseDI	CCNNGG	7 cut(s)	602, 829, 1059, 1384, 1432, 1715, 1891
BseGI	GGATG	4 cut(s)	225, 679, 1213, 1333
BseJI	GATNNNNATC	2 cut(s)	776, 1943
BseLI	CCNNNNNNNGG	4 cut(s)	690, 756, 1543, 1602
BseMI	GCAATG	1 cut(s)	365
BseMII	CTCAG	4 cut(s)	542, 912, 1043, 1398
BseNI	ACTGG	6 cut(s)	189, 221, 642, 822, 1124, 1352
BseRI	GAGGAG	3 cut(s)	119, 1187, 1697
BseXI	GCAGC	8 cut(s)	274, 528, 610, 1089, 1093, 1288, 1305, 1675
BseYI	CCCAGC	1 cut(s)	1415
BsgI	GTGCAG	1 cut(s)	181
Bsh1236I	CGCG	1 cut(s)	1581
BshFI	GGCC	5 cut(s)	715, 1351, 1437, 1500, 1547
BshNI	GGYRCC	1 cut(s)	1711
BsiHKAI	GWGCWC	4 cut(s)	58, 927, 940, 1188
BsiHKCI	CYCGRG	1 cut(s)	1716
BsiSI	CCGG	1 cut(s)	1119
BslFI	GGGAC	4 cut(s)	177, 1224, 1540, 1898
BslI	CCNNNNNNNGG	4 cut(s)	690, 756, 1543, 1602
BsmAI	GTCTC	3 cut(s)	628, 1011, 1831
BsmBI	CGTCTC	2 cut(s)	628, 1011
BsmFI	GGGAC	4 cut(s)	177, 1224, 1540, 1898
BsnI	GGCC	5 cut(s)	715, 1351, 1437, 1500, 1547
BsoBI	CYCGRG	1 cut(s)	1716
Bsp119I	TTCGAA	1 cut(s)	573
Bsp1286I	GDGCHC	6 cut(s)	58, 282, 927, 940, 1188, 1482
Bsp143I	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
Bsp19I	CCATGG	2 cut(s)	1384, 1432
BspACI	CCGC	6 cut(s)	104, 201, 750, 838, 1064, 1080
BspANI	GGCC	5 cut(s)	715, 1351, 1437, 1500, 1547
BspCNI	CTCAG	4 cut(s)	543, 913, 1044, 1399
BspFNI	CGCG	1 cut(s)	1581
BspLI	GGNNCC	3 cut(s)	363, 870, 1713
BspMI	ACCTGC	1 cut(s)	324
BspOI	GCTAGC	1 cut(s)	1926
BspPI	GGATC	1 cut(s)	643
BspT104I	TTCGAA	1 cut(s)	573
BspT107I	GGYRCC	1 cut(s)	1711
BspTI	CTTAAG	2 cut(s)	137, 325
BsrDI	GCAATG	1 cut(s)	365
BsrI	ACTGG	6 cut(s)	189, 221, 642, 822, 1124, 1352
BssECI	CCNNGG	7 cut(s)	602, 829, 1059, 1384, 1432, 1715, 1891
BssMI	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
BssNI	GRCGYC	1 cut(s)	835
BssSI	CACGAG	1 cut(s)	51
BssT1I	CCWWGG	3 cut(s)	829, 1384, 1432
Bst2BI	CACGAG	1 cut(s)	51
Bst2UI	CCWGG	5 cut(s)	311, 604, 757, 942, 1893
Bst4CI	ACNGT	3 cut(s)	353, 403, 892
Bst6I	CTCTTC	5 cut(s)	1133, 1162, 1251, 1829, 1866
BstACI	GRCGYC	1 cut(s)	835
BstAFI	CTTAAG	2 cut(s)	137, 325
BstAPI	GCANNNNNTGC	2 cut(s)	1048, 1083
BstBAI	YACGTR	1 cut(s)	1917
BstBI	TTCGAA	1 cut(s)	573
BstC8I	GCNNGC	7 cut(s)	305, 679, 727, 750, 1577, 1762, 1924
BstDEI	CTNAG	6 cut(s)	551, 662, 921, 1052, 1407, 1624
BstDSI	CCRYGG	2 cut(s)	1384, 1432
BstF5I	GGATG	4 cut(s)	225, 679, 1213, 1333
BstFNI	CGCG	1 cut(s)	1581
BstHHI	GCGC	1 cut(s)	1581
BstKTI	GATC	7 cut(s)	238, 651, 780, 1623, 1632, 1846, 1947
BstMAI	GTCTC	3 cut(s)	628, 1011, 1831
BstMBI	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
BstMWI	GCNNNNNNNGC	7 cut(s)	101, 547, 800, 809, 1048, 1083, 1576
BstNI	CCWGG	5 cut(s)	311, 604, 757, 942, 1893
BstNSI	RCATGY	3 cut(s)	729, 1529, 1570
BstSCI	CCNGG	5 cut(s)	309, 602, 755, 940, 1891
BstUI	CGCG	1 cut(s)	1581
BstV1I	GCAGC	8 cut(s)	274, 528, 610, 1089, 1093, 1288, 1305, 1675
BstV2I	GAAGAC	3 cut(s)	705, 814, 1598
BstX2I	RGATCY	3 cut(s)	648, 1629, 1843
BstYI	RGATCY	3 cut(s)	648, 1629, 1843
BsuRI	GGCC	5 cut(s)	715, 1351, 1437, 1500, 1547
BtgI	CCRYGG	2 cut(s)	1384, 1432
BtgZI	GCGATG	1 cut(s)	784
BtrI	CACGTC	1 cut(s)	1600
BtsCI	GGATG	4 cut(s)	225, 679, 1213, 1333
BtsI	GCAGTG	1 cut(s)	29
BtsIMutI	CAGTG	3 cut(s)	29, 1131, 1404
BveI	ACCTGC	1 cut(s)	324
Cac8I	GCNNGC	7 cut(s)	305, 679, 727, 750, 1577, 1762, 1924
CaiI	CAGNNNCTG	3 cut(s)	195, 316, 890
CfoI	GCGC	1 cut(s)	1581
Cfr13I	GGNCC	4 cut(s)	313, 362, 713, 1121
CseI	GACGC	1 cut(s)	843
Csp6I	GTAC	2 cut(s)	732, 1564
CviQI	GTAC	2 cut(s)	732, 1564
DdeI	CTNAG	6 cut(s)	551, 662, 921, 1052, 1407, 1624
DpnI	GATC	7 cut(s)	237, 650, 779, 1622, 1631, 1845, 1946
DpnII	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
EaeI	YGGCCR	2 cut(s)	1349, 1435
Eam1104I	CTCTTC	5 cut(s)	1133, 1162, 1251, 1829, 1866
EarI	CTCTTC	5 cut(s)	1133, 1162, 1251, 1829, 1866
EciI	GGCGGA	1 cut(s)	1079
Eco130I	CCWWGG	3 cut(s)	829, 1384, 1432
Eco24I	GRGCYC	2 cut(s)	282, 1482
Eco47I	GGWCC	3 cut(s)	313, 362, 1121
Eco57I	CTGAAG	2 cut(s)	426, 1808
Eco88I	CYCGRG	1 cut(s)	1716
EcoO109I	RGGNCCY	1 cut(s)	313
EcoRII	CCWGG	5 cut(s)	309, 602, 755, 940, 1891
EcoT14I	CCWWGG	3 cut(s)	829, 1384, 1432
EcoT38I	GRGCYC	2 cut(s)	282, 1482
ErhI	CCWWGG	3 cut(s)	829, 1384, 1432
Esp3I	CGTCTC	2 cut(s)	628, 1011
FalI	AAGNNNNNCTT	2 cut(s)	131, 163
FaqI	GGGAC	4 cut(s)	177, 1224, 1540, 1898
FauI	CCCGC	2 cut(s)	97, 757
FblI	GTMKAC	1 cut(s)	405
Fnu4HI	GCNGC	9 cut(s)	263, 542, 599, 838, 1078, 1107, 1294, 1302, 1664
FokI	GGATG	4 cut(s)	232, 686, 1200, 1320
FriOI	GRGCYC	2 cut(s)	282, 1482
Fsp4HI	GCNGC	9 cut(s)	263, 542, 599, 838, 1078, 1107, 1294, 1302, 1664
FspBI	CTAG	4 cut(s)	1328, 1421, 1841, 1923
GlaI	GCGC	1 cut(s)	1580
GluI	GCNGC	9 cut(s)	263, 542, 599, 838, 1078, 1107, 1294, 1302, 1664
GsaI	CCCAGC	1 cut(s)	1419
GsuI	CTGGAG	5 cut(s)	293, 566, 659, 924, 1914
HaeIII	GGCC	5 cut(s)	715, 1351, 1437, 1500, 1547
HapII	CCGG	1 cut(s)	1119
HgaI	GACGC	1 cut(s)	843
HhaI	GCGC	1 cut(s)	1581
Hin1I	GRCGYC	1 cut(s)	835
Hin6I	GCGC	1 cut(s)	1579
HinP1I	GCGC	1 cut(s)	1579
HincII	GTYRAC	2 cut(s)	609, 1116
HindII	GTYRAC	2 cut(s)	609, 1116
HindIII	AAGCTT	2 cut(s)	134, 1001
HinfI	GANTC	8 cut(s)	29, 116, 143, 436, 511, 854, 1469, 1898
HpaII	CCGG	1 cut(s)	1119
HphI	GGTGA	7 cut(s)	299, 656, 939, 998, 1480, 1714, 1835
Hpy166II	GTNNAC	7 cut(s)	406, 501, 609, 989, 1116, 1516, 1705
Hpy188III	TCNNGA	3 cut(s)	652, 1267, 1795
Hpy8I	GTNNAC	7 cut(s)	406, 501, 609, 989, 1116, 1516, 1705
Hpy99I	CGWCG	2 cut(s)	164, 1601
HpyAV	CCTTC	9 cut(s)	234, 450, 554, 569, 976, 1188, 1246, 1814, 1922
HpyCH4III	ACNGT	3 cut(s)	353, 403, 892
HpyCH4IV	ACGT	4 cut(s)	621, 1455, 1599, 1916
HpyCH4V	TGCA	8 cut(s)	198, 262, 677, 689, 729, 1042, 1570, 1663
HpyF10VI	GCNNNNNNNGC	7 cut(s)	101, 547, 800, 809, 1048, 1083, 1576
HpyF3I	CTNAG	6 cut(s)	551, 662, 921, 1052, 1407, 1624
HpySE526I	ACGT	4 cut(s)	621, 1455, 1599, 1916
Hsp92I	GRCGYC	1 cut(s)	835
HspAI	GCGC	1 cut(s)	1579
Kzo9I	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
LmnI	GCTCC	7 cut(s)	312, 483, 547, 686, 874, 943, 1605
Lsp1109I	GCAGC	8 cut(s)	274, 528, 610, 1089, 1093, 1288, 1305, 1675
LweI	GCATC	2 cut(s)	664, 1773
MaeI	CTAG	4 cut(s)	1328, 1421, 1841, 1923
MaeII	ACGT	4 cut(s)	621, 1455, 1599, 1916
MaeIII	GTNAC	1 cut(s)	1582
MalI	GATC	7 cut(s)	237, 650, 779, 1622, 1631, 1845, 1946
MboI	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
MflI	RGATCY	3 cut(s)	648, 1629, 1843
MhlI	GDGCHC	6 cut(s)	58, 282, 927, 940, 1188, 1482
MlsI	TGGCCA	1 cut(s)	1437
MluCI	AATT	6 cut(s)	384, 422, 569, 668, 807, 1219
MluNI	TGGCCA	1 cut(s)	1437
MlyI	GAGTC	1 cut(s)	1478
MmeI	TCCRAC	4 cut(s)	513, 651, 1788, 1857
Mox20I	TGGCCA	1 cut(s)	1437
MroXI	GAANNNNTTC	1 cut(s)	569
MscI	TGGCCA	1 cut(s)	1437
MslI	CAYNNNNRTG	2 cut(s)	1311, 1538
Msp20I	TGGCCA	1 cut(s)	1437
MspA1I	CMGCKG	1 cut(s)	1080
MspCI	CTTAAG	2 cut(s)	137, 325
MspI	CCGG	1 cut(s)	1119
MspR9I	CCNGG	5 cut(s)	311, 604, 757, 942, 1893
MvaI	CCWGG	5 cut(s)	311, 604, 757, 942, 1893
MvnI	CGCG	1 cut(s)	1581
MwoI	GCNNNNNNNGC	7 cut(s)	101, 547, 800, 809, 1048, 1083, 1576
NcoI	CCATGG	2 cut(s)	1384, 1432
NdeII	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
NheI	GCTAGC	1 cut(s)	1922
NlaIV	GGNNCC	3 cut(s)	363, 870, 1713
NmeAIII	GCCGAG	1 cut(s)	1040
NmuCI	GTSAC	1 cut(s)	1582
NspI	RCATGY	3 cut(s)	729, 1529, 1570
NspV	TTCGAA	1 cut(s)	573
PaeI	GCATGC	1 cut(s)	729
PcsI	WCGNNNNNNNCGW	1 cut(s)	1473
PdmI	GAANNNNTTC	1 cut(s)	569
PfeI	GAWTC	7 cut(s)	29, 116, 143, 436, 511, 854, 1898
PfoI	TCCNGGA	1 cut(s)	309
PkrI	GCNGC	9 cut(s)	264, 543, 600, 839, 1079, 1108, 1295, 1303, 1665
PleI	GAGTC	1 cut(s)	1477
PpsI	GAGTC	1 cut(s)	1477
Ppu21I	YACGTR	1 cut(s)	1917
PpuMI	RGGWCCY	1 cut(s)	313
PsiI	TTATAA	1 cut(s)	1248
Psp1406I	AACGTT	1 cut(s)	1455
Psp5II	RGGWCCY	1 cut(s)	313
Psp6I	CCWGG	5 cut(s)	309, 602, 755, 940, 1891
PspFI	CCCAGC	1 cut(s)	1415
PspGI	CCWGG	5 cut(s)	309, 602, 755, 940, 1891
PspN4I	GGNNCC	3 cut(s)	363, 870, 1713
PspPI	GGNCC	4 cut(s)	313, 362, 713, 1121
PspPPI	RGGWCCY	1 cut(s)	313
PstNI	CAGNNNCTG	3 cut(s)	195, 316, 890
PsuI	RGATCY	3 cut(s)	648, 1629, 1843
RsaI	GTAC	2 cut(s)	733, 1565
RsaNI	GTAC	2 cut(s)	732, 1564
RseI	CAYNNNNRTG	2 cut(s)	1311, 1538
SatI	GCNGC	9 cut(s)	263, 542, 599, 838, 1078, 1107, 1294, 1302, 1664
Sau3AI	GATC	7 cut(s)	235, 648, 777, 1620, 1629, 1843, 1944
Sau96I	GGNCC	4 cut(s)	313, 362, 713, 1121
SchI	GAGTC	1 cut(s)	1478
ScrFI	CCNGG	5 cut(s)	311, 604, 757, 942, 1893
SduI	GDGCHC	6 cut(s)	58, 282, 927, 940, 1188, 1482
SfaNI	GCATC	2 cut(s)	664, 1773
SfuI	TTCGAA	1 cut(s)	573
SinI	GGWCC	3 cut(s)	313, 362, 1121
SmiMI	CAYNNNNRTG	2 cut(s)	1311, 1538
SmlI	CTYRAG	5 cut(s)	131, 137, 266, 281, 325
SmoI	CTYRAG	5 cut(s)	131, 137, 266, 281, 325
SphI	GCATGC	1 cut(s)	729
Sse9I	AATT	6 cut(s)	384, 422, 569, 668, 807, 1219
SsiI	CCGC	6 cut(s)	104, 201, 750, 838, 1064, 1080
SspI	AATATT	1 cut(s)	615
SspMI	CTAG	4 cut(s)	1328, 1421, 1841, 1923
StyD4I	CCNGG	5 cut(s)	309, 602, 755, 940, 1891
StyI	CCWWGG	3 cut(s)	829, 1384, 1432
TaaI	ACNGT	3 cut(s)	353, 403, 892
TaiI	ACGT	4 cut(s)	624, 1458, 1602, 1919
TaqI	TCGA	4 cut(s)	238, 573, 740, 959
TaqII	GACCGA	1 cut(s)	1610
TasI	AATT	6 cut(s)	384, 422, 569, 668, 807, 1219
TatI	WGTACW	1 cut(s)	1563
TauI	GCSGC	1 cut(s)	840
TfiI	GAWTC	7 cut(s)	29, 116, 143, 436, 511, 854, 1898
TscAI	CASTG	3 cut(s)	29, 1131, 1411
TseFI	GTSAC	1 cut(s)	1582
TseI	GCWGC	8 cut(s)	262, 541, 598, 1077, 1106, 1293, 1301, 1663
Tsp45I	GTSAC	1 cut(s)	1582
TspDTI	ATGAA	9 cut(s)	29, 218, 359, 711, 996, 1168, 1169, 1301, 1955
TspGWI	ACGGA	1 cut(s)	177
TspRI	CASTG	3 cut(s)	29, 1131, 1411
Vha464I	CTTAAG	2 cut(s)	137, 325
VpaK11BI	GGWCC	3 cut(s)	313, 362, 1121
XapI	RAATTY	2 cut(s)	422, 569
XceI	RCATGY	3 cut(s)	729, 1529, 1570
XcmI	CCANNNNNNNNNTGG	2 cut(s)	634, 1344
XmiI	GTMKAC	1 cut(s)	405
XmnI	GAANNNNTTC	1 cut(s)	569
XspI	CTAG	4 cut(s)	1328, 1421, 1841, 1923

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.