Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006014

Physical Location & Seq

Genomic Coordinates Reverse (-)

14480482 .. 14483927

Gene Structure 3446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G36790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGCTGAGTAGATCAGTTGCTTCTGCTGTTACACCGGTCTCATCTTCTTCTCTCTTACCAAACTCAAAGCCTATCTTCTGTCTGAAAACCCTCTCCGGTTATCGTTCTTCTTCTTTCTGTGGCGGCTGTATTCGTAAAATCAACCATAAGCCTCTTCGAATGACGAGTTCCAATATTACACCAAGAGCTATGGCCACACAACAGCTTGAGAACGCTGATCAGCTCATTGATTCTGTCGAAACTTTTATCTTCGATTGTGATGGTGTGATTTGGAAGGGAGATAAATTGATAGAGGGAGTTCCTGAAACTCTTGATATGCTTCGTGCCAAGGGAAAGAGATTGGTTTTTGTGACAAACAACTCAACAAAATCTAGGAAACAGTATGGAAAAAAGTTCGAGACTCTTGGCCTGAATGTTAACGAGGAGGAGATATTTGCTTCATCTTTTGCTGCTGCTGCATACTTGCAGTCTATTAATTTCCCAAAAGATAAGAAGGTCTATGTGATTGGTGAGGAAGGTATCTTGAAAGAGCTAGAGCTTGCTGGTTTTCAATACCTTGGAGGTCCGGATGATGGTAAAAGACAGATTGAATTGAAGCCAGGTTTTCTAATGGAGCATGATCATGATGTTGGAGCTGTTGTGGTTGGATTTGATCGCTATTTCAACTACTACAAAATTCAGTATGGAACACTCTGTATCCGTGAAAACCCGGGGTGTCTTTTCATCGCTACAAACCGAGATGCTGTCACTCACCTTACTGATGCTCAAGAATGGGCAGGTGGTGGCTCTATGGTTGGTGCTCTTGTTGGATCCACTCAACGTGAGCCTCTTGTTGTTGGAAAACCCTCAACTTTTATGATGGACTATTTAGCAGACAAATTTGGAATCCAAAAGTCACAGATATGCATGGTTGGTGATAGATTGGACACTGACATTTTATTCGGGCAGAATGGCGGTTGTAAGACTCTACTCGTCCTCTCGGGTGTTACTTCAATCTCTATGTTGGAAAGCCCTGAGAACAAGATACAACCAGATTTCTACACCAGCAAGATCTCCGATTTTCTGTCTCCGAAAGCCGCAACTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00630 ko01100 ko01110 ko01130 ko01200 map00630 map01100 map01110 map01130 map01200

Pfam Domains

Protein Families

Hydrolase_6 Hydrolase_like

Protein Analysis

362

Amino Acids

39.76

Weight (kDa)

6.9

Isoelectric Point (pI)

32.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase	PF00702	80 - 319	8.1e-16	haloacid dehalogenase-like hydrolase
Hydrolase_6	PF13344	82 - 184	1.1e-35	Haloacid dehalogenase-like hydrolase
Hydrolase_like	PF13242	279 - 353	2.8e-21	HAD-hyrolase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36700 AT5G36700 AT5G36700 AT5G36700 AT5G36790 AT5G36790 AT5G36790
fragaria_vesca	FvH4_6g00110 FvH4_6g00110
malus_domestica	MD04G1248400.v1.1 MD12G1262300.v1.1
prunus_persica	Prupe.6G364700_v2.0.a1 Prupe.6G364700_v2.0.a1 Prupe.6G364700_v2.0.a1 Prupe.6G364700_v2.0.a1
pyrus_communis	pycom04g21910 pycom12g24170
rosa_chinensis	RchiOBHm_Chr3g0447461
rosa_laevigata	RLG00000025996
rosa_roxburghii	Rroxscaffold_6G00425680
rosa_rugosa	Rorug02G0601900 Rorug02G0602000
rosa_samantha	Rh3AG002200 Rh3BG001700 Rh3CG002000 Rh3DG002100
rosa_wichuraiana	Rw3G000110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	767
Acc36I	ACCTGC	1 cut(s)	767
AccIII	TCCGGA	1 cut(s)	565
AciI	CCGC	3 cut(s)	123, 954, 1077
AclWI	GGATC	2 cut(s)	804, 817
AcoI	YGGCCR	1 cut(s)	192
AcsI	RAATTY	2 cut(s)	675, 878
AfiI	CCNNNNNNNGG	1 cut(s)	572
AgeI	ACCGGT	1 cut(s)	34
AgsI	TTSAA	6 cut(s)	526, 551, 590, 595, 664, 993
AjnI	CCWGG	1 cut(s)	598
AluBI	AGCT	6 cut(s)	188, 205, 223, 532, 538, 635
AluI	AGCT	6 cut(s)	188, 205, 223, 532, 538, 635
Alw21I	GWGCWC	1 cut(s)	802
Alw26I	GTCTC	3 cut(s)	43, 392, 1071
AlwI	GGATC	2 cut(s)	804, 817
Ama87I	CYCGRG	2 cut(s)	709, 979
Aor13HI	TCCGGA	1 cut(s)	565
AoxI	GGCC	2 cut(s)	192, 406
ApeKI	GCWGC	3 cut(s)	449, 452, 455
ApoI	RAATTY	2 cut(s)	675, 878
ArsI	GACNNNNNNTTYG	2 cut(s)	923, 955
AseI	ATTAAT	1 cut(s)	474
AsiGI	ACCGGT	1 cut(s)	34
AspS9I	GGNCC	1 cut(s)	563
AsuC2I	CCSGG	2 cut(s)	710, 711
AsuHPI	GGTGA	3 cut(s)	521, 743, 926
AsuII	TTCGAA	1 cut(s)	157
AvaI	CYCGRG	2 cut(s)	709, 979
AvaII	GGWCC	1 cut(s)	563
BalI	TGGCCA	1 cut(s)	194
BamHI	GGATCC	1 cut(s)	809
Bbv12I	GWGCWC	1 cut(s)	802
BbvI	GCAGC	3 cut(s)	436, 439, 442
BccI	CCATC	3 cut(s)	254, 566, 853
BciT130I	CCWGG	1 cut(s)	600
BciVI	GTATCC	1 cut(s)	707
BclI	TGATCA	2 cut(s)	217, 619
BcnI	CCSGG	2 cut(s)	710, 711
BcoDI	GTCTC	3 cut(s)	43, 392, 1071
BfaI	CTAG	2 cut(s)	372, 533
BfuAI	ACCTGC	1 cut(s)	767
BfuI	GTATCC	1 cut(s)	707
BglII	AGATCT	1 cut(s)	1050
BisI	GCNGC	5 cut(s)	124, 450, 453, 456, 1077
BlsI	GCNGC	5 cut(s)	125, 451, 454, 457, 1078
Bme1390I	CCNGG	3 cut(s)	600, 710, 711
Bme18I	GGWCC	1 cut(s)	563
BmeT110I	CYCGRG	2 cut(s)	709, 979
BmgT120I	GGNCC	1 cut(s)	563
BmiI	GGNNCC	1 cut(s)	811
BmrFI	CCNGG	3 cut(s)	600, 710, 711
BmsI	GCATC	2 cut(s)	730, 751
Bpu14I	TTCGAA	1 cut(s)	157
BpuEI	CTTGAG	2 cut(s)	227, 750
BpuMI	CCSGG	2 cut(s)	710, 711
BsaI	GGTCTC	1 cut(s)	43
BsaJI	CCNNGG	4 cut(s)	327, 556, 709, 710
BsaWI	WCCGGW	3 cut(s)	34, 95, 565
BsaXI	ACNNNNNCTCC	2 cut(s)	624, 654
Bsc4I	CCNNNNNNNGG	1 cut(s)	572
Bse118I	RCCGGY	1 cut(s)	34
BseAI	TCCGGA	1 cut(s)	565
BseBI	CCWGG	1 cut(s)	600
BseDI	CCNNGG	4 cut(s)	327, 556, 709, 710
BseGI	GGATG	1 cut(s)	574
BseLI	CCNNNNNNNGG	1 cut(s)	572
BseMII	CTCAG	1 cut(s)	1005
BseRI	GAGGAG	2 cut(s)	437, 440
BseXI	GCAGC	3 cut(s)	436, 439, 442
BshFI	GGCC	2 cut(s)	194, 408
BshTI	ACCGGT	1 cut(s)	34
BsiHKAI	GWGCWC	1 cut(s)	802
BsiHKCI	CYCGRG	2 cut(s)	709, 979
BsiSI	CCGG	4 cut(s)	35, 96, 566, 710
BslI	CCNNNNNNNGG	1 cut(s)	572
BsmAI	GTCTC	3 cut(s)	43, 392, 1071
BsnI	GGCC	2 cut(s)	194, 408
Bso31I	GGTCTC	1 cut(s)	43
BsoBI	CYCGRG	2 cut(s)	709, 979
Bsp119I	TTCGAA	1 cut(s)	157
Bsp1286I	GDGCHC	1 cut(s)	802
Bsp13I	TCCGGA	1 cut(s)	565
Bsp143I	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
BspACI	CCGC	3 cut(s)	123, 954, 1077
BspANI	GGCC	2 cut(s)	194, 408
BspCNI	CTCAG	1 cut(s)	1006
BspEI	TCCGGA	1 cut(s)	565
BspHI	TCATGA	1 cut(s)	622
BspLI	GGNNCC	1 cut(s)	811
BspMI	ACCTGC	1 cut(s)	767
BspPI	GGATC	2 cut(s)	804, 817
BspT104I	TTCGAA	1 cut(s)	157
BspTNI	GGTCTC	1 cut(s)	43
BsrFI	RCCGGY	1 cut(s)	34
BssAI	RCCGGY	1 cut(s)	34
BssECI	CCNNGG	4 cut(s)	327, 556, 709, 710
BssMI	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
BssT1I	CCWWGG	2 cut(s)	327, 556
Bst2UI	CCWGG	1 cut(s)	600
Bst4CI	ACNGT	2 cut(s)	381, 1084
Bst6I	CTCTTC	1 cut(s)	159
BstBI	TTCGAA	1 cut(s)	157
BstC8I	GCNNGC	1 cut(s)	540
BstDEI	CTNAG	2 cut(s)	5, 1014
BstF5I	GGATG	1 cut(s)	574
BstKTI	GATC	6 cut(s)	14, 220, 622, 655, 812, 1053
BstMAI	GTCTC	3 cut(s)	43, 392, 1071
BstMBI	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
BstMWI	GCNNNNNNNGC	1 cut(s)	455
BstNI	CCWGG	1 cut(s)	600
BstSCI	CCNGG	3 cut(s)	598, 708, 709
BstV1I	GCAGC	3 cut(s)	436, 439, 442
BstX2I	RGATCY	2 cut(s)	809, 1050
BstYI	RGATCY	2 cut(s)	809, 1050
BsuI	GTATCC	1 cut(s)	707
BsuRI	GGCC	2 cut(s)	194, 408
BtgZI	GCGATG	1 cut(s)	709
BtsCI	GGATG	1 cut(s)	574
BtsIMutI	CAGTG	1 cut(s)	927
BveI	ACCTGC	1 cut(s)	767
Cac8I	GCNNGC	1 cut(s)	540
CciI	TCATGA	1 cut(s)	622
Cfr10I	RCCGGY	1 cut(s)	34
Cfr13I	GGNCC	1 cut(s)	563
Cfr9I	CCCGGG	1 cut(s)	709
CspAI	ACCGGT	1 cut(s)	34
CviAII	CATG	3 cut(s)	617, 623, 907
DdeI	CTNAG	2 cut(s)	5, 1014
DpnI	GATC	6 cut(s)	13, 219, 621, 654, 811, 1052
DpnII	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
EaeI	YGGCCR	1 cut(s)	192
Eam1104I	CTCTTC	1 cut(s)	159
EarI	CTCTTC	1 cut(s)	159
Eco130I	CCWWGG	2 cut(s)	327, 556
Eco31I	GGTCTC	1 cut(s)	43
Eco47I	GGWCC	1 cut(s)	563
Eco88I	CYCGRG	2 cut(s)	709, 979
EcoRII	CCWGG	1 cut(s)	598
EcoT14I	CCWWGG	2 cut(s)	327, 556
EcoT22I	ATGCAT	1 cut(s)	908
ErhI	CCWWGG	2 cut(s)	327, 556
FaeI	CATG	3 cut(s)	620, 626, 910
FalI	AAGNNNNNCTT	2 cut(s)	59, 91
FatI	CATG	3 cut(s)	616, 622, 906
FbaI	TGATCA	2 cut(s)	217, 619
Fnu4HI	GCNGC	5 cut(s)	124, 450, 453, 456, 1077
FokI	GGATG	1 cut(s)	581
Fsp4HI	GCNGC	5 cut(s)	124, 450, 453, 456, 1077
FspBI	CTAG	2 cut(s)	372, 533
GluI	GCNGC	5 cut(s)	124, 450, 453, 456, 1077
HaeIII	GGCC	2 cut(s)	194, 408
HapII	CCGG	4 cut(s)	35, 96, 566, 710
Hin1II	CATG	3 cut(s)	620, 626, 910
HincII	GTYRAC	1 cut(s)	418
HindII	GTYRAC	1 cut(s)	418
HinfI	GANTC	4 cut(s)	230, 400, 885, 964
HpaI	GTTAAC	1 cut(s)	418
HpaII	CCGG	4 cut(s)	35, 96, 566, 710
HphI	GGTGA	3 cut(s)	521, 743, 926
Hpy166II	GTNNAC	1 cut(s)	418
Hpy188I	TCNGA	3 cut(s)	84, 1057, 1071
Hpy188III	TCNNGA	7 cut(s)	302, 311, 397, 523, 566, 623, 767
Hpy8I	GTNNAC	1 cut(s)	418
HpyAV	CCTTC	3 cut(s)	268, 487, 509
HpyCH4III	ACNGT	2 cut(s)	381, 1084
HpyCH4IV	ACGT	1 cut(s)	820
HpyCH4V	TGCA	3 cut(s)	458, 466, 906
HpyF10VI	GCNNNNNNNGC	1 cut(s)	455
HpyF3I	CTNAG	2 cut(s)	5, 1014
HpySE526I	ACGT	1 cut(s)	820
Hsp92II	CATG	3 cut(s)	620, 626, 910
Kpn2I	TCCGGA	1 cut(s)	565
Ksp22I	TGATCA	2 cut(s)	217, 619
KspAI	GTTAAC	1 cut(s)	418
Kzo9I	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
LmnI	GCTCC	2 cut(s)	613, 632
Lsp1109I	GCAGC	3 cut(s)	436, 439, 442
LweI	GCATC	2 cut(s)	730, 751
MaeI	CTAG	2 cut(s)	372, 533
MaeII	ACGT	1 cut(s)	820
MaeIII	GTNAC	5 cut(s)	28, 349, 745, 894, 985
MalI	GATC	6 cut(s)	13, 219, 621, 654, 811, 1052
MboI	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
MboII	GAAGA	7 cut(s)	36, 39, 67, 99, 102, 146, 241
MflI	RGATCY	2 cut(s)	809, 1050
MhlI	GDGCHC	1 cut(s)	802
MlsI	TGGCCA	1 cut(s)	194
MluCI	AATT	5 cut(s)	284, 475, 590, 675, 878
MluNI	TGGCCA	1 cut(s)	194
MlyI	GAGTC	2 cut(s)	394, 958
MmeI	TCCRAC	5 cut(s)	610, 625, 787, 817, 984
Mox20I	TGGCCA	1 cut(s)	194
Mph1103I	ATGCAT	1 cut(s)	908
MroI	TCCGGA	1 cut(s)	565
MscI	TGGCCA	1 cut(s)	194
MseI	TTAA	2 cut(s)	417, 474
MslI	CAYNNNNRTG	2 cut(s)	621, 901
Msp20I	TGGCCA	1 cut(s)	194
MspI	CCGG	4 cut(s)	35, 96, 566, 710
MspR9I	CCNGG	3 cut(s)	600, 710, 711
MvaI	CCWGG	1 cut(s)	600
MwoI	GCNNNNNNNGC	1 cut(s)	455
NciI	CCSGG	2 cut(s)	710, 711
NdeII	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
NlaIII	CATG	3 cut(s)	620, 626, 910
NlaIV	GGNNCC	1 cut(s)	811
NmuCI	GTSAC	3 cut(s)	349, 745, 894
NsiI	ATGCAT	1 cut(s)	908
NspV	TTCGAA	1 cut(s)	157
PagI	TCATGA	1 cut(s)	622
PaqCI	CACCTGC	1 cut(s)	767
PfeI	GAWTC	2 cut(s)	230, 885
PinAI	ACCGGT	1 cut(s)	34
PkrI	GCNGC	5 cut(s)	125, 451, 454, 457, 1078
PleI	GAGTC	2 cut(s)	394, 958
PpsI	GAGTC	2 cut(s)	394, 958
PshBI	ATTAAT	1 cut(s)	474
Psp6I	CCWGG	1 cut(s)	598
PspGI	CCWGG	1 cut(s)	598
PspN4I	GGNNCC	1 cut(s)	811
PspPI	GGNCC	1 cut(s)	563
PsuI	RGATCY	2 cut(s)	809, 1050
RseI	CAYNNNNRTG	2 cut(s)	621, 901
SaqAI	TTAA	2 cut(s)	417, 474
SatI	GCNGC	5 cut(s)	124, 450, 453, 456, 1077
Sau3AI	GATC	6 cut(s)	11, 217, 619, 652, 809, 1050
Sau96I	GGNCC	1 cut(s)	563
SchI	GAGTC	2 cut(s)	394, 958
ScrFI	CCNGG	3 cut(s)	600, 710, 711
SduI	GDGCHC	1 cut(s)	802
SfaNI	GCATC	2 cut(s)	730, 751
SfuI	TTCGAA	1 cut(s)	157
SinI	GGWCC	1 cut(s)	563
SmaI	CCCGGG	1 cut(s)	711
SmiMI	CAYNNNNRTG	2 cut(s)	621, 901
SmlI	CTYRAG	2 cut(s)	206, 765
SmoI	CTYRAG	2 cut(s)	206, 765
Sse9I	AATT	5 cut(s)	284, 475, 590, 675, 878
SsiI	CCGC	3 cut(s)	123, 954, 1077
SspI	AATATT	1 cut(s)	175
SspMI	CTAG	2 cut(s)	372, 533
StyD4I	CCNGG	3 cut(s)	598, 708, 709
StyI	CCWWGG	2 cut(s)	327, 556
TaaI	ACNGT	2 cut(s)	381, 1084
TaiI	ACGT	1 cut(s)	823
TaqI	TCGA	4 cut(s)	157, 237, 252, 396
TasI	AATT	5 cut(s)	284, 475, 590, 675, 878
TauI	GCSGC	2 cut(s)	126, 1079
TfiI	GAWTC	2 cut(s)	230, 885
Tru1I	TTAA	2 cut(s)	417, 474
Tru9I	TTAA	2 cut(s)	417, 474
TscAI	CASTG	1 cut(s)	934
TseFI	GTSAC	3 cut(s)	349, 745, 894
TseI	GCWGC	3 cut(s)	449, 452, 455
Tsp45I	GTSAC	3 cut(s)	349, 745, 894
TspDTI	ATGAA	2 cut(s)	429, 712
TspGWI	ACGGA	1 cut(s)	689
TspMI	CCCGGG	1 cut(s)	709
TspRI	CASTG	1 cut(s)	934
VpaK11BI	GGWCC	1 cut(s)	563
VspI	ATTAAT	1 cut(s)	474
XapI	RAATTY	2 cut(s)	675, 878
XmaI	CCCGGG	1 cut(s)	709
XspI	CTAG	2 cut(s)	372, 533
Zsp2I	ATGCAT	1 cut(s)	908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.