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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40520 AT5G40520 |
| fragaria_vesca | FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 |
| malus_domestica | MD04G1046800.v1.1 |
| prunus_persica | Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 |
| pyrus_communis | pycom04g04060 |
| rosa_chinensis | RchiOBHm_Chr3g0487611 |
| rosa_laevigata | RLG00000022996 |
| rosa_multiflora | Rmu_sc0012412.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00394650 |
| rosa_rugosa | Rorug03G0235000 Rorug03G0235100 Rorug03G0235100 |
| rosa_samantha | Rh3AG283300 Rh3BG319000 Rh3CG317100 Rh3DG315300 |
| rosa_wichuraiana | Rw3G025050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 543, 1200 |
| AccI | GTMKAC | 2 cut(s) | 260, 331 |
| AciI | CCGC | 3 cut(s) | 156, 656, 1492 |
| AclI | AACGTT | 2 cut(s) | 668, 1546 |
| AclWI | GGATC | 3 cut(s) | 146, 915, 1089 |
| AcoI | YGGCCR | 1 cut(s) | 1489 |
| AcsI | RAATTY | 4 cut(s) | 160, 184, 1449, 1505 |
| AcuI | CTGAAG | 1 cut(s) | 648 |
| AfaI | GTAC | 2 cut(s) | 237, 1433 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1306 |
| AflII | CTTAAG | 2 cut(s) | 464, 646 |
| AgsI | TTSAA | 7 cut(s) | 46, 303, 322, 677, 1037, 1373, 1577 |
| AjiI | CACGTC | 2 cut(s) | 335, 1245 |
| AjnI | CCWGG | 2 cut(s) | 475, 1568 |
| Alw21I | GWGCWC | 1 cut(s) | 832 |
| Alw26I | GTCTC | 4 cut(s) | 75, 797, 1182, 1454 |
| AlwI | GGATC | 3 cut(s) | 146, 915, 1089 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 626 |
| Ama87I | CYCGRG | 1 cut(s) | 1299 |
| AoxI | GGCC | 1 cut(s) | 1489 |
| ApeKI | GCWGC | 3 cut(s) | 224, 491, 494 |
| ApoI | RAATTY | 4 cut(s) | 160, 184, 1449, 1505 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1287, 1319 |
| AseI | ATTAAT | 1 cut(s) | 126 |
| AspS9I | GGNCC | 1 cut(s) | 1117 |
| AsuC2I | CCSGG | 1 cut(s) | 167 |
| AsuHPI | GGTGA | 4 cut(s) | 510, 902, 1409, 1574 |
| AsuNHI | GCTAGC | 1 cut(s) | 377 |
| AvaI | CYCGRG | 1 cut(s) | 1299 |
| AvaII | GGWCC | 1 cut(s) | 1117 |
| BbsI | GAAGAC | 1 cut(s) | 921 |
| Bbv12I | GWGCWC | 1 cut(s) | 832 |
| BbvI | GCAGC | 3 cut(s) | 211, 478, 481 |
| BccI | CCATC | 4 cut(s) | 144, 222, 1321, 1705 |
| BciT130I | CCWGG | 2 cut(s) | 477, 1570 |
| BclI | TGATCA | 1 cut(s) | 1390 |
| BcnI | CCSGG | 1 cut(s) | 167 |
| BcoDI | GTCTC | 4 cut(s) | 75, 797, 1182, 1454 |
| BfaI | CTAG | 8 cut(s) | 248, 378, 911, 1221, 1436, 1499, 1676, 1723 |
| BfmI | CTRYAG | 3 cut(s) | 405, 419, 536 |
| BfrI | CTTAAG | 2 cut(s) | 464, 646 |
| BfuAI | ACCTGC | 2 cut(s) | 543, 1200 |
| BglII | AGATCT | 1 cut(s) | 1223 |
| BisI | GCNGC | 4 cut(s) | 225, 492, 495, 1492 |
| BlsI | GCNGC | 4 cut(s) | 226, 493, 496, 1493 |
| Bme1390I | CCNGG | 3 cut(s) | 167, 477, 1570 |
| Bme18I | GGWCC | 1 cut(s) | 1117 |
| BmeT110I | CYCGRG | 1 cut(s) | 1299 |
| BmgBI | CACGTC | 2 cut(s) | 335, 1245 |
| BmgT120I | GGNCC | 1 cut(s) | 1117 |
| BmiI | GGNNCC | 1 cut(s) | 1119 |
| BmrFI | CCNGG | 3 cut(s) | 167, 477, 1570 |
| BmsI | GCATC | 6 cut(s) | 211, 378, 613, 883, 1007, 1048 |
| BmtI | GCTAGC | 1 cut(s) | 381 |
| BpiI | GAAGAC | 1 cut(s) | 921 |
| BpuEI | CTTGAG | 2 cut(s) | 816, 1035 |
| BpuMI | CCSGG | 1 cut(s) | 167 |
| BsaAI | YACGTR | 1 cut(s) | 275 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1080 |
| BsaI | GGTCTC | 1 cut(s) | 1182 |
| BsaJI | CCNNGG | 1 cut(s) | 782 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 794, 824 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1306 |
| Bse1I | ACTGG | 1 cut(s) | 1429 |
| Bse3DI | GCAATG | 3 cut(s) | 234, 285, 1068 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1080 |
| BseBI | CCWGG | 2 cut(s) | 477, 1570 |
| BseDI | CCNNGG | 1 cut(s) | 782 |
| BseGI | GGATG | 2 cut(s) | 186, 1546 |
| BseJI | GATNNNNATC | 1 cut(s) | 1080 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1306 |
| BseMI | GCAATG | 3 cut(s) | 234, 285, 1068 |
| BseMII | CTCAG | 2 cut(s) | 278, 408 |
| BseNI | ACTGG | 1 cut(s) | 1429 |
| BseRI | GAGGAG | 2 cut(s) | 812, 815 |
| BseX3I | CGGCCG | 1 cut(s) | 1489 |
| BseXI | GCAGC | 3 cut(s) | 211, 478, 481 |
| BsgI | GTGCAG | 2 cut(s) | 712, 1119 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1492 |
| BshFI | GGCC | 1 cut(s) | 1491 |
| BsiEI | CGRYCG | 1 cut(s) | 1492 |
| BsiHKAI | GWGCWC | 1 cut(s) | 832 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1299 |
| BsiSI | CCGG | 1 cut(s) | 166 |
| BslFI | GGGAC | 1 cut(s) | 1657 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1306 |
| BsmAI | GTCTC | 4 cut(s) | 75, 797, 1182, 1454 |
| BsmFI | GGGAC | 1 cut(s) | 1657 |
| BsmI | GAATGC | 1 cut(s) | 1109 |
| BsnI | GGCC | 1 cut(s) | 1491 |
| Bso31I | GGTCTC | 1 cut(s) | 1182 |
| BsoBI | CYCGRG | 1 cut(s) | 1299 |
| Bsp1286I | GDGCHC | 1 cut(s) | 832 |
| BspACI | CCGC | 3 cut(s) | 156, 656, 1492 |
| BspANI | GGCC | 1 cut(s) | 1491 |
| BspCNI | CTCAG | 2 cut(s) | 277, 407 |
| BspHI | TCATGA | 1 cut(s) | 1084 |
| BspLI | GGNNCC | 1 cut(s) | 1119 |
| BspMAI | CTGCAG | 3 cut(s) | 409, 423, 540 |
| BspMI | ACCTGC | 2 cut(s) | 543, 1200 |
| BspOI | GCTAGC | 1 cut(s) | 381 |
| BspPI | GGATC | 3 cut(s) | 146, 915, 1089 |
| BspQI | GCTCTTC | 1 cut(s) | 1168 |
| BspTI | CTTAAG | 2 cut(s) | 464, 646 |
| BspTNI | GGTCTC | 1 cut(s) | 1182 |
| BsrDI | GCAATG | 3 cut(s) | 234, 285, 1068 |
| BsrI | ACTGG | 1 cut(s) | 1429 |
| BssECI | CCNNGG | 1 cut(s) | 782 |
| BssT1I | CCWWGG | 1 cut(s) | 782 |
| Bst2UI | CCWGG | 2 cut(s) | 477, 1570 |
| Bst4CI | ACNGT | 2 cut(s) | 920, 1517 |
| Bst6I | CTCTTC | 5 cut(s) | 111, 210, 1002, 1168, 1674 |
| BstAFI | CTTAAG | 2 cut(s) | 464, 646 |
| BstBAI | YACGTR | 1 cut(s) | 275 |
| BstC8I | GCNNGC | 5 cut(s) | 375, 379, 1496, 1608, 1620 |
| BstDEI | CTNAG | 5 cut(s) | 146, 264, 394, 470, 1531 |
| BstF5I | GGATG | 2 cut(s) | 186, 1546 |
| BstMAI | GTCTC | 4 cut(s) | 75, 797, 1182, 1454 |
| BstMCI | CGRYCG | 1 cut(s) | 1492 |
| BstNI | CCWGG | 2 cut(s) | 477, 1570 |
| BstSCI | CCNGG | 3 cut(s) | 165, 475, 1568 |
| BstSFI | CTRYAG | 3 cut(s) | 405, 419, 536 |
| BstV1I | GCAGC | 3 cut(s) | 211, 478, 481 |
| BstV2I | GAAGAC | 1 cut(s) | 921 |
| BstX2I | RGATCY | 2 cut(s) | 907, 1223 |
| BstYI | RGATCY | 2 cut(s) | 907, 1223 |
| BstZI | CGGCCG | 1 cut(s) | 1489 |
| BsuRI | GGCC | 1 cut(s) | 1491 |
| BtgZI | GCGATG | 1 cut(s) | 1599 |
| BtrI | CACGTC | 2 cut(s) | 335, 1245 |
| BtsCI | GGATG | 2 cut(s) | 186, 1546 |
| BtsI | GCAGTG | 1 cut(s) | 700 |
| BtsIMutI | CAGTG | 3 cut(s) | 700, 925, 1273 |
| BveI | ACCTGC | 2 cut(s) | 543, 1200 |
| Cac8I | GCNNGC | 5 cut(s) | 375, 379, 1496, 1608, 1620 |
| CaiI | CAGNNNCTG | 1 cut(s) | 626 |
| CciI | TCATGA | 1 cut(s) | 1084 |
| Cfr13I | GGNCC | 1 cut(s) | 1117 |
| CseI | GACGC | 1 cut(s) | 332 |
| Csp6I | GTAC | 2 cut(s) | 236, 1432 |
| CviAII | CATG | 5 cut(s) | 1085, 1136, 1151, 1277, 1394 |
| CviQI | GTAC | 2 cut(s) | 236, 1432 |
| DdeI | CTNAG | 5 cut(s) | 146, 264, 394, 470, 1531 |
| EaeI | YGGCCR | 1 cut(s) | 1489 |
| EagI | CGGCCG | 1 cut(s) | 1489 |
| Eam1104I | CTCTTC | 5 cut(s) | 111, 210, 1002, 1168, 1674 |
| EarI | CTCTTC | 5 cut(s) | 111, 210, 1002, 1168, 1674 |
| EclXI | CGGCCG | 1 cut(s) | 1489 |
| Eco130I | CCWWGG | 1 cut(s) | 782 |
| Eco31I | GGTCTC | 1 cut(s) | 1182 |
| Eco47I | GGWCC | 1 cut(s) | 1117 |
| Eco52I | CGGCCG | 1 cut(s) | 1489 |
| Eco57I | CTGAAG | 1 cut(s) | 648 |
| Eco88I | CYCGRG | 1 cut(s) | 1299 |
| EcoRII | CCWGG | 2 cut(s) | 475, 1568 |
| EcoT14I | CCWWGG | 1 cut(s) | 782 |
| ErhI | CCWWGG | 1 cut(s) | 782 |
| FaeI | CATG | 5 cut(s) | 1088, 1139, 1154, 1280, 1397 |
| FaqI | GGGAC | 1 cut(s) | 1657 |
| FatI | CATG | 5 cut(s) | 1084, 1135, 1150, 1276, 1393 |
| FauI | CCCGC | 1 cut(s) | 163 |
| FbaI | TGATCA | 1 cut(s) | 1390 |
| FblI | GTMKAC | 2 cut(s) | 260, 331 |
| Fnu4HI | GCNGC | 4 cut(s) | 225, 492, 495, 1492 |
| FokI | GGATG | 2 cut(s) | 193, 1553 |
| Fsp4HI | GCNGC | 4 cut(s) | 225, 492, 495, 1492 |
| FspBI | CTAG | 8 cut(s) | 248, 378, 911, 1221, 1436, 1499, 1676, 1723 |
| GluI | GCNGC | 4 cut(s) | 225, 492, 495, 1492 |
| HaeIII | GGCC | 1 cut(s) | 1491 |
| HapII | CCGG | 1 cut(s) | 166 |
| HgaI | GACGC | 1 cut(s) | 332 |
| Hin1II | CATG | 5 cut(s) | 1088, 1139, 1154, 1280, 1397 |
| HincII | GTYRAC | 2 cut(s) | 745, 1520 |
| HindII | GTYRAC | 2 cut(s) | 745, 1520 |
| HindIII | AAGCTT | 3 cut(s) | 1031, 1465, 1608 |
| HinfI | GANTC | 8 cut(s) | 37, 68, 1067, 1076, 1127, 1212, 1302, 1565 |
| HpaII | CCGG | 1 cut(s) | 166 |
| HphI | GGTGA | 4 cut(s) | 510, 902, 1409, 1574 |
| Hpy166II | GTNNAC | 4 cut(s) | 261, 332, 745, 1520 |
| Hpy8I | GTNNAC | 4 cut(s) | 261, 332, 745, 1520 |
| Hpy99I | CGWCG | 1 cut(s) | 348 |
| HpyAV | CCTTC | 3 cut(s) | 95, 226, 547 |
| HpyCH4III | ACNGT | 2 cut(s) | 920, 1517 |
| HpyCH4IV | ACGT | 7 cut(s) | 274, 334, 668, 1244, 1522, 1546, 1670 |
| HpyF3I | CTNAG | 5 cut(s) | 146, 264, 394, 470, 1531 |
| HpySE526I | ACGT | 7 cut(s) | 274, 334, 668, 1244, 1522, 1546, 1670 |
| Hsp92II | CATG | 5 cut(s) | 1088, 1139, 1154, 1280, 1397 |
| Ksp22I | TGATCA | 1 cut(s) | 1390 |
| LguI | GCTCTTC | 1 cut(s) | 1168 |
| LmnI | GCTCC | 2 cut(s) | 138, 424 |
| Lsp1109I | GCAGC | 3 cut(s) | 211, 478, 481 |
| LweI | GCATC | 6 cut(s) | 211, 378, 613, 883, 1007, 1048 |
| MaeI | CTAG | 8 cut(s) | 248, 378, 911, 1221, 1436, 1499, 1676, 1723 |
| MaeII | ACGT | 7 cut(s) | 274, 334, 668, 1244, 1522, 1546, 1670 |
| MaeIII | GTNAC | 2 cut(s) | 564, 1234 |
| MfeI | CAATTG | 3 cut(s) | 317, 428, 792 |
| MflI | RGATCY | 2 cut(s) | 907, 1223 |
| MhlI | GDGCHC | 1 cut(s) | 832 |
| MlyI | GAGTC | 4 cut(s) | 31, 1076, 1221, 1311 |
| MseI | TTAA | 9 cut(s) | 126, 240, 294, 360, 465, 647, 722, 818, 1700 |
| MslI | CAYNNNNRTG | 2 cut(s) | 219, 1286 |
| MspA1I | CMGCKG | 1 cut(s) | 656 |
| MspCI | CTTAAG | 2 cut(s) | 464, 646 |
| MspI | CCGG | 1 cut(s) | 166 |
| MspR9I | CCNGG | 3 cut(s) | 167, 477, 1570 |
| MunI | CAATTG | 3 cut(s) | 317, 428, 792 |
| Mva1269I | GAATGC | 1 cut(s) | 1109 |
| MvaI | CCWGG | 2 cut(s) | 477, 1570 |
| NciI | CCSGG | 1 cut(s) | 167 |
| NheI | GCTAGC | 1 cut(s) | 377 |
| NlaIII | CATG | 5 cut(s) | 1088, 1139, 1154, 1280, 1397 |
| NlaIV | GGNNCC | 1 cut(s) | 1119 |
| NmuCI | GTSAC | 1 cut(s) | 1234 |
| PagI | TCATGA | 1 cut(s) | 1084 |
| PciSI | GCTCTTC | 1 cut(s) | 1168 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 340 |
| PctI | GAATGC | 1 cut(s) | 1109 |
| PfeI | GAWTC | 4 cut(s) | 68, 1076, 1127, 1565 |
| PflFI | GACNNNGTC | 1 cut(s) | 336 |
| PfoI | TCCNGGA | 1 cut(s) | 165 |
| PkrI | GCNGC | 4 cut(s) | 226, 493, 496, 1493 |
| PleI | GAGTC | 4 cut(s) | 31, 1075, 1220, 1310 |
| PpsI | GAGTC | 4 cut(s) | 31, 1075, 1220, 1310 |
| Ppu21I | YACGTR | 1 cut(s) | 275 |
| PshBI | ATTAAT | 1 cut(s) | 126 |
| Psp1406I | AACGTT | 2 cut(s) | 668, 1546 |
| Psp6I | CCWGG | 2 cut(s) | 475, 1568 |
| PspGI | CCWGG | 2 cut(s) | 475, 1568 |
| PspN4I | GGNNCC | 1 cut(s) | 1119 |
| PspPI | GGNCC | 1 cut(s) | 1117 |
| PstI | CTGCAG | 3 cut(s) | 409, 423, 540 |
| PstNI | CAGNNNCTG | 1 cut(s) | 626 |
| PsuI | RGATCY | 2 cut(s) | 907, 1223 |
| PsyI | GACNNNGTC | 1 cut(s) | 336 |
| RsaI | GTAC | 2 cut(s) | 237, 1433 |
| RsaNI | GTAC | 2 cut(s) | 236, 1432 |
| RseI | CAYNNNNRTG | 2 cut(s) | 219, 1286 |
| SapI | GCTCTTC | 1 cut(s) | 1168 |
| SaqAI | TTAA | 9 cut(s) | 126, 240, 294, 360, 465, 647, 722, 818, 1700 |
| SatI | GCNGC | 4 cut(s) | 225, 492, 495, 1492 |
| Sau96I | GGNCC | 1 cut(s) | 1117 |
| SchI | GAGTC | 4 cut(s) | 31, 1076, 1221, 1311 |
| ScrFI | CCNGG | 3 cut(s) | 167, 477, 1570 |
| SduI | GDGCHC | 1 cut(s) | 832 |
| SfaNI | GCATC | 6 cut(s) | 211, 378, 613, 883, 1007, 1048 |
| SfcI | CTRYAG | 3 cut(s) | 405, 419, 536 |
| SinI | GGWCC | 1 cut(s) | 1117 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 219, 1286 |
| SmlI | CTYRAG | 4 cut(s) | 464, 646, 831, 1050 |
| SmoI | CTYRAG | 4 cut(s) | 464, 646, 831, 1050 |
| SsiI | CCGC | 3 cut(s) | 156, 656, 1492 |
| SspI | AATATT | 1 cut(s) | 846 |
| SspMI | CTAG | 8 cut(s) | 248, 378, 911, 1221, 1436, 1499, 1676, 1723 |
| StyD4I | CCNGG | 3 cut(s) | 165, 475, 1568 |
| StyI | CCWWGG | 1 cut(s) | 782 |
| TaaI | ACNGT | 2 cut(s) | 920, 1517 |
| TaiI | ACGT | 7 cut(s) | 277, 337, 671, 1247, 1525, 1549, 1673 |
| TaqI | TCGA | 3 cut(s) | 40, 346, 876 |
| TaqII | GACCGA | 2 cut(s) | 61, 1344 |
| TauI | GCSGC | 1 cut(s) | 1494 |
| TfiI | GAWTC | 4 cut(s) | 68, 1076, 1127, 1565 |
| Tru1I | TTAA | 9 cut(s) | 126, 240, 294, 360, 465, 647, 722, 818, 1700 |
| Tru9I | TTAA | 9 cut(s) | 126, 240, 294, 360, 465, 647, 722, 818, 1700 |
| TscAI | CASTG | 3 cut(s) | 700, 925, 1273 |
| TseFI | GTSAC | 1 cut(s) | 1234 |
| TseI | GCWGC | 3 cut(s) | 224, 491, 494 |
| Tsp45I | GTSAC | 1 cut(s) | 1234 |
| TspGWI | ACGGA | 2 cut(s) | 560, 1553 |
| TspRI | CASTG | 3 cut(s) | 700, 925, 1273 |
| Tth111I | GACNNNGTC | 1 cut(s) | 336 |
| Vha464I | CTTAAG | 2 cut(s) | 464, 646 |
| VpaK11BI | GGWCC | 1 cut(s) | 1117 |
| VspI | ATTAAT | 1 cut(s) | 126 |
| XapI | RAATTY | 4 cut(s) | 160, 184, 1449, 1505 |
| XbaI | TCTAGA | 1 cut(s) | 910 |
| XmiI | GTMKAC | 2 cut(s) | 260, 331 |
| XspI | CTAG | 8 cut(s) | 248, 378, 911, 1221, 1436, 1499, 1676, 1723 |