Prupe.8G045700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
4830564 .. 4837042
6479 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G045700.3

Sequence Viewer

Length: 1998 bp
ATGGCAAGATCGCAGCTTATGGAGAACTTGGGGTTTTACCAGACGGATTGCGAGTCCCTCTGGTCACAAATTAAACGCCAAGAGAAGCAGATACAGCTCAAAAGGAGGTGGTTGTTGGGGCTTCCTACTTCCAAATCTGAGCAGAAGAAGTTGGAGAGGTGTGAGTTCTTGAACAACACGTGTTTGCCGGAATCGTTTCTTAGGGAAGATGATATGTTCTATGAGACTGTAAAATCTTCTGTTGACACAGCTTTTGGAGCATGTGATATTGAAGGAGGGAATAGAGTATTTCAAGATGATATGAAATTGCTTGACGCACCCTATATATCCGGAGCCTTGTCATCATGCCTTGATGATTTGACTAACAAGGGTCTTTACCTTTTTGCTGTTATACTAAGAGGACGCTCAGTGAAGTTTGAGAAAACTCGTTGGAAGATGAAAAGGGTTATCAGAGAATCTCTTCCAAATGTTTTTGGAAGACAAGATAATCATAATGATAAAATGGAAATATCTAAACAGATATCTCAACTTCTCAATGACCCACAATATTTCCAGGATAATTTTATCACATTTTCGTCCTCCAGATTACAGTCTCATCATGCTGCTGTTAGAAAGGTGCTGGATGGACTCAGGGACTTGCCTTATGAGACCCTACTTGCAATGCACAGAAAGCTTAAAGGAGGGCGACAAAGTCTACCGCAATTACGGCCTAAGAAAAGTGGCTGGAATCGAGACAGTCTAATTAACCAAGTGAGGAAAACAATTGAAAAGATGCTTTCAGAACTTTCAATAGGTGATGAACTGCAGGAGCCATTAACCAAAGCCATGGCAGTAGTAGGCTTATCACTGAAGTTGATACCAGGTTTTCATAATTCCACCATAACAGAGTTTCACCAATTCACACCAGAAATAAAGATATTGCAGGATGAGATAGCTAGGGCTATTTGGTTAGTTAAAACAAAGATTAGAATACCAGAGCTGAAGAACTTAAAGACTCTGTTAGACCCAAATGCTAAAGTGTCAAACAGGAGTTTGCGAACAGCAATTAGGAAAATGCTAACTGAATATCTTTTTGATTGTGGTGATATGGATACCATTCCCAAGGCATTATTAGAAACTCTTGTTGTTATCAACAGGAATTCACAAAGTAAACCGCATAGACGCATCACAAAAGATGAAATTGAAGCAGAGGTAGAATGTATACTGAATGTGAGTGCTCAGGTAAAGCAGATTGTTTGGGATTTGTCCCCTGACCATGACTTGGATTTAGATTTTGATGACGCATATATGGAAGAAATGGAGGAATGTGATGATGATGATCATAAGTCCAATGGTGATGATAACGAAAATAATGGTCGGCTAGAGAAAGATGGATTATGTGGAAGTGATAGATCTCATTCTAATGATTTGTTTTATGAAGCTGAAAGTACCGCGGAGTCAACACCATTTGTTTGCAAGCCACCTACTGCTGAAACTACCAGAAATGACTGTTATCCTCCCCTTACACCTAACAAAAGTGTACTTGTCGAGTTGCAGGAACCCATGTTCTCCACTCAAGGAGATTCTCTTGACTCCAGTAGTATCAAAAGAGGGTTAGATGGTAATTATATTGAAAGACATGAACCTGAATGTAATACTGGAATGAACACAGAAAAGCTGCTGCATCTCAAGCCAGAAGATACATATGAGAAACAAACCACTTGTAAAAACAAATACCTCGCAGTTCAAGAAGGTTGTGATGAGACAAGCATAATTGCCTATAATCTCATTGGTCACGTGTTGGAGGAGTTTGCAAAGACAGAAGGTTTGAATTTAGACTGGGATGATACTTTGTATCTCAGAGGTGATTGTGCAACTCAAGAAGTGGTAGAAGAAAAGCAGACATTGTCTCACGAAAACGATGATGGTTCTATAATTGTTCGAGTAGTTGAGGAACTAGTACCTTCTTTTCCAAAGAGTGCATTAGAAGCATTAAGGAAGTTGGTGGGCCTACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

666

Amino Acids

76.02

Weight (kDa)

5.21

Isoelectric Point (pI)

57.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1261
AccI GTMKAC 2 cut(s) 694, 1201
AccII CGCG 1 cut(s) 1433
AccIII TCCGGA 1 cut(s) 329
AciI CCGC 4 cut(s) 698, 1154, 1431, 1433
AcsI RAATTY 2 cut(s) 1138, 1810
AcuI CTGAAG 2 cut(s) 869, 1001
AcvI CACGTG 2 cut(s) 180, 1777
AfaI GTAC 3 cut(s) 1429, 1521, 1941
AfiI CCNNNNNNNGG 1 cut(s) 1261
AflIII ACRYGT 3 cut(s) 177, 179, 1776
AgsI TTSAA 9 cut(s) 172, 272, 293, 767, 789, 1184, 1613, 1727, 1810
AhlI ACTAGT 1 cut(s) 1936
AjnI CCWGG 2 cut(s) 552, 859
AloI GAACNNNNNNTCC 2 cut(s) 1529, 1561
AluBI AGCT 8 cut(s) 16, 97, 251, 673, 935, 979, 1421, 1657
AluI AGCT 8 cut(s) 16, 97, 251, 673, 935, 979, 1421, 1657
Alw21I GWGCWC 1 cut(s) 1219
Alw26I GTCTC 6 cut(s) 218, 597, 641, 726, 1736, 1893
Aor13HI TCCGGA 1 cut(s) 329
AoxI GGCC 2 cut(s) 707, 1987
ApeKI GCWGC 4 cut(s) 13, 602, 1657, 1660
ApoI RAATTY 2 cut(s) 1138, 1810
ArsI GACNNNNNNTTYG 4 cut(s) 236, 268, 1789, 1821
Asp700I GAANNNNTTC 2 cut(s) 195, 459
AspS9I GGNCC 1 cut(s) 1987
AsuHPI GGTGA 5 cut(s) 806, 884, 1094, 1346, 1856
BbrPI CACGTG 2 cut(s) 180, 1777
BbsI GAAGAC 1 cut(s) 484
Bbv12I GWGCWC 1 cut(s) 1219
BbvI GCAGC 4 cut(s) 25, 589, 1644, 1647
BccI CCATC 4 cut(s) 617, 1364, 1592, 1898
BceAI ACGGC 1 cut(s) 722
BciT130I CCWGG 2 cut(s) 554, 861
BciVI GTATCC 1 cut(s) 1084
BclI TGATCA 1 cut(s) 1318
BcoDI GTCTC 6 cut(s) 218, 597, 641, 726, 1736, 1893
BcuI ACTAGT 1 cut(s) 1936
BfaI CTAG 3 cut(s) 936, 1361, 1937
BfmI CTRYAG 2 cut(s) 803, 1994
BfuI GTATCC 1 cut(s) 1084
BglII AGATCT 1 cut(s) 1391
BisI GCNGC 4 cut(s) 14, 603, 1658, 1661
BlsI GCNGC 4 cut(s) 15, 604, 1659, 1662
Bme1390I CCNGG 2 cut(s) 554, 861
BmgT120I GGNCC 1 cut(s) 1987
BmiI GGNNCC 3 cut(s) 334, 810, 1539
BmrFI CCNGG 2 cut(s) 554, 861
BmrI ACTGGG 1 cut(s) 1828
BmsI GCATC 3 cut(s) 762, 1173, 1672
BmuI ACTGGG 1 cut(s) 1828
BpiI GAAGAC 1 cut(s) 484
BpmI CTGGAG 2 cut(s) 565, 1558
Bpu10I CCTNAGC 1 cut(s) 1218
BpuEI CTTGAG 3 cut(s) 1539, 1652, 1842
BsaAI YACGTR 2 cut(s) 180, 1777
BsaBI GATNNNNATC 1 cut(s) 1317
BsaI GGTCTC 1 cut(s) 641
BsaJI CCNNGG 3 cut(s) 825, 1101, 1431
BsaWI WCCGGW 1 cut(s) 329
Bsc4I CCNNNNNNNGG 1 cut(s) 1261
Bse1I ACTGG 3 cut(s) 1575, 1642, 1823
Bse3DI GCAATG 1 cut(s) 666
Bse8I GATNNNNATC 1 cut(s) 1317
BseAI TCCGGA 1 cut(s) 329
BseBI CCWGG 2 cut(s) 554, 861
BseDI CCNNGG 3 cut(s) 825, 1101, 1431
BseGI GGATG 3 cut(s) 628, 931, 1828
BseJI GATNNNNATC 1 cut(s) 1317
BseLI CCNNNNNNNGG 1 cut(s) 1261
BseMI GCAATG 1 cut(s) 666
BseMII CTCAG 5 cut(s) 129, 420, 643, 1232, 1852
BseNI ACTGG 3 cut(s) 1575, 1642, 1823
BseRI GAGGAG 1 cut(s) 1799
BseXI GCAGC 4 cut(s) 25, 589, 1644, 1647
Bsh1236I CGCG 1 cut(s) 1433
BshFI GGCC 2 cut(s) 709, 1989
BsiHKAI GWGCWC 1 cut(s) 1219
BsiSI CCGG 2 cut(s) 188, 330
BslFI GGGAC 3 cut(s) 40, 647, 1231
BslI CCNNNNNNNGG 1 cut(s) 1261
BsmAI GTCTC 6 cut(s) 218, 597, 641, 726, 1736, 1893
BsmFI GGGAC 3 cut(s) 40, 647, 1231
BsnI GGCC 2 cut(s) 709, 1989
Bso31I GGTCTC 1 cut(s) 641
Bsp1286I GDGCHC 1 cut(s) 1219
Bsp13I TCCGGA 1 cut(s) 329
Bsp143I GATC 3 cut(s) 8, 1318, 1391
Bsp19I CCATGG 1 cut(s) 825
BspACI CCGC 4 cut(s) 698, 1154, 1431, 1433
BspANI GGCC 2 cut(s) 709, 1989
BspCNI CTCAG 5 cut(s) 130, 419, 642, 1231, 1851
BspEI TCCGGA 1 cut(s) 329
BspFNI CGCG 1 cut(s) 1433
BspLI GGNNCC 3 cut(s) 334, 810, 1539
BspMAI CTGCAG 1 cut(s) 807
BspTNI GGTCTC 1 cut(s) 641
BsrDI GCAATG 1 cut(s) 666
BsrI ACTGG 3 cut(s) 1575, 1642, 1823
BssECI CCNNGG 3 cut(s) 825, 1101, 1431
BssMI GATC 3 cut(s) 8, 1318, 1391
BssNAI GTATAC 1 cut(s) 1202
BssT1I CCWWGG 2 cut(s) 825, 1101
Bst1107I GTATAC 1 cut(s) 1202
Bst2UI CCWGG 2 cut(s) 554, 861
Bst4CI ACNGT 4 cut(s) 229, 591, 737, 1490
Bst6I CTCTTC 1 cut(s) 465
BstBAI YACGTR 2 cut(s) 180, 1777
BstC8I GCNNGC 1 cut(s) 1457
BstDEI CTNAG 8 cut(s) 138, 200, 395, 406, 629, 711, 1218, 1838
BstDSI CCRYGG 2 cut(s) 825, 1431
BstF5I GGATG 3 cut(s) 628, 931, 1828
BstFNI CGCG 1 cut(s) 1433
BstKTI GATC 3 cut(s) 11, 1321, 1394
BstMAI GTCTC 6 cut(s) 218, 597, 641, 726, 1736, 1893
BstMBI GATC 3 cut(s) 8, 1318, 1391
BstMWI GCNNNNNNNGC 6 cut(s) 94, 257, 670, 706, 1669, 1967
BstNI CCWGG 2 cut(s) 554, 861
BstNSI RCATGY 1 cut(s) 264
BstSCI CCNGG 2 cut(s) 552, 859
BstSFI CTRYAG 2 cut(s) 803, 1994
BstUI CGCG 1 cut(s) 1433
BstV1I GCAGC 4 cut(s) 25, 589, 1644, 1647
BstV2I GAAGAC 1 cut(s) 484
BstX2I RGATCY 1 cut(s) 1391
BstXI CCANNNNNNTGG 1 cut(s) 826
BstYI RGATCY 1 cut(s) 1391
BstZ17I GTATAC 1 cut(s) 1202
BsuI GTATCC 1 cut(s) 1084
BsuRI GGCC 2 cut(s) 709, 1989
BtgI CCRYGG 2 cut(s) 825, 1431
BtsCI GGATG 3 cut(s) 628, 931, 1828
BtsIMutI CAGTG 2 cut(s) 414, 845
Cac8I GCNNGC 1 cut(s) 1457
Cfr13I GGNCC 1 cut(s) 1987
Cfr42I CCGCGG 1 cut(s) 1434
CseI GACGC 4 cut(s) 323, 411, 1170, 1289
CsiI ACCWGGT 1 cut(s) 859
Csp6I GTAC 3 cut(s) 1428, 1520, 1940
CviAII CATG 7 cut(s) 261, 345, 599, 826, 1256, 1543, 1619
CviQI GTAC 3 cut(s) 1428, 1520, 1940
DdeI CTNAG 8 cut(s) 138, 200, 395, 406, 629, 711, 1218, 1838
DpnI GATC 3 cut(s) 10, 1320, 1393
DpnII GATC 3 cut(s) 8, 1318, 1391
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
Eco130I CCWWGG 2 cut(s) 825, 1101
Eco31I GGTCTC 1 cut(s) 641
Eco32I GATATC 1 cut(s) 522
Eco57I CTGAAG 2 cut(s) 869, 1001
Eco72I CACGTG 2 cut(s) 180, 1777
EcoRI GAATTC 1 cut(s) 1138
EcoRII CCWGG 2 cut(s) 552, 859
EcoRV GATATC 1 cut(s) 522
EcoT14I CCWWGG 2 cut(s) 825, 1101
ErhI CCWWGG 2 cut(s) 825, 1101
FaeI CATG 7 cut(s) 264, 348, 602, 829, 1259, 1546, 1622
FaqI GGGAC 3 cut(s) 40, 647, 1231
FatI CATG 7 cut(s) 260, 344, 598, 825, 1255, 1542, 1618
FauNDI CATATG 1 cut(s) 1684
FbaI TGATCA 1 cut(s) 1318
FblI GTMKAC 2 cut(s) 694, 1201
Fnu4HI GCNGC 4 cut(s) 14, 603, 1658, 1661
FokI GGATG 3 cut(s) 635, 938, 1835
Fsp4HI GCNGC 4 cut(s) 14, 603, 1658, 1661
FspBI CTAG 3 cut(s) 936, 1361, 1937
GluI GCNGC 4 cut(s) 14, 603, 1658, 1661
GsuI CTGGAG 2 cut(s) 565, 1558
HaeIII GGCC 2 cut(s) 709, 1989
HapII CCGG 2 cut(s) 188, 330
HgaI GACGC 4 cut(s) 323, 411, 1170, 1289
Hin1II CATG 7 cut(s) 264, 348, 602, 829, 1259, 1546, 1622
HincII GTYRAC 2 cut(s) 244, 1440
HindII GTYRAC 2 cut(s) 244, 1440
HindIII AAGCTT 1 cut(s) 671
HinfI GANTC 9 cut(s) 53, 191, 455, 627, 727, 994, 1436, 1562, 1571
HpaII CCGG 2 cut(s) 188, 330
HphI GGTGA 5 cut(s) 806, 884, 1094, 1346, 1856
Hpy166II GTNNAC 6 cut(s) 244, 695, 1151, 1202, 1440, 1520
Hpy188I TCNGA 4 cut(s) 139, 452, 781, 1841
Hpy188III TCNNGA 9 cut(s) 169, 293, 330, 582, 731, 1568, 1727, 1859, 1892
Hpy8I GTNNAC 6 cut(s) 244, 695, 1151, 1202, 1440, 1520
HpyAV CCTTC 4 cut(s) 266, 1724, 1796, 1953
HpyCH4III ACNGT 4 cut(s) 229, 591, 737, 1490
HpyCH4IV ACGT 2 cut(s) 179, 1776
HpyF10VI GCNNNNNNNGC 6 cut(s) 94, 257, 670, 706, 1669, 1967
HpyF3I CTNAG 8 cut(s) 138, 200, 395, 406, 629, 711, 1218, 1838
HpySE526I ACGT 2 cut(s) 179, 1776
Hsp92II CATG 7 cut(s) 264, 348, 602, 829, 1259, 1546, 1622
Kpn2I TCCGGA 1 cut(s) 329
Ksp22I TGATCA 1 cut(s) 1318
KspI CCGCGG 1 cut(s) 1434
Kzo9I GATC 3 cut(s) 8, 1318, 1391
LmnI GCTCC 3 cut(s) 257, 332, 808
Lsp1109I GCAGC 4 cut(s) 25, 589, 1644, 1647
LweI GCATC 3 cut(s) 762, 1173, 1672
MabI ACCWGGT 1 cut(s) 859
MaeI CTAG 3 cut(s) 936, 1361, 1937
MaeII ACGT 2 cut(s) 179, 1776
MaeIII GTNAC 2 cut(s) 63, 1772
MalI GATC 3 cut(s) 10, 1320, 1393
MboI GATC 3 cut(s) 8, 1318, 1391
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 1 cut(s) 1391
MhlI GDGCHC 1 cut(s) 1219
MlyI GAGTC 5 cut(s) 62, 621, 988, 1445, 1565
MmeI TCCRAC 3 cut(s) 132, 410, 1761
MroI TCCGGA 1 cut(s) 329
MroXI GAANNNNTTC 2 cut(s) 195, 459
MseI TTAA 7 cut(s) 72, 675, 744, 815, 954, 989, 1973
MslI CAYNNNNRTG 1 cut(s) 1401
MspA1I CMGCKG 1 cut(s) 1433
MspI CCGG 2 cut(s) 188, 330
MspR9I CCNGG 2 cut(s) 554, 861
MunI CAATTG 1 cut(s) 762
MvaI CCWGG 2 cut(s) 554, 861
MvnI CGCG 1 cut(s) 1433
MwoI GCNNNNNNNGC 6 cut(s) 94, 257, 670, 706, 1669, 1967
NcoI CCATGG 1 cut(s) 825
NdeI CATATG 1 cut(s) 1684
NdeII GATC 3 cut(s) 8, 1318, 1391
NlaIII CATG 7 cut(s) 264, 348, 602, 829, 1259, 1546, 1622
NlaIV GGNNCC 3 cut(s) 334, 810, 1539
NmuCI GTSAC 2 cut(s) 63, 1772
NspI RCATGY 1 cut(s) 264
PdmI GAANNNNTTC 2 cut(s) 195, 459
PfeI GAWTC 4 cut(s) 191, 455, 727, 1562
PflFI GACNNNGTC 2 cut(s) 690, 1885
PflMI CCANNNNNTGG 1 cut(s) 1261
PfoI TCCNGGA 1 cut(s) 552
PkrI GCNGC 4 cut(s) 15, 604, 1659, 1662
PleI GAGTC 5 cut(s) 61, 621, 988, 1444, 1565
PmaCI CACGTG 2 cut(s) 180, 1777
PmlI CACGTG 2 cut(s) 180, 1777
PpsI GAGTC 5 cut(s) 61, 621, 988, 1444, 1565
Ppu21I YACGTR 2 cut(s) 180, 1777
Psp6I CCWGG 2 cut(s) 552, 859
PspCI CACGTG 2 cut(s) 180, 1777
PspGI CCWGG 2 cut(s) 552, 859
PspN4I GGNNCC 3 cut(s) 334, 810, 1539
PspPI GGNCC 1 cut(s) 1987
PstI CTGCAG 1 cut(s) 807
PsuI RGATCY 1 cut(s) 1391
PsyI GACNNNGTC 2 cut(s) 690, 1885
RsaI GTAC 3 cut(s) 1429, 1521, 1941
RsaNI GTAC 3 cut(s) 1428, 1520, 1940
RseI CAYNNNNRTG 1 cut(s) 1401
SacII CCGCGG 1 cut(s) 1434
SaqAI TTAA 7 cut(s) 72, 675, 744, 815, 954, 989, 1973
SatI GCNGC 4 cut(s) 14, 603, 1658, 1661
Sau3AI GATC 3 cut(s) 8, 1318, 1391
Sau96I GGNCC 1 cut(s) 1987
SchI GAGTC 5 cut(s) 62, 621, 988, 1445, 1565
ScrFI CCNGG 2 cut(s) 554, 861
SduI GDGCHC 1 cut(s) 1219
SexAI ACCWGGT 1 cut(s) 859
SfaNI GCATC 3 cut(s) 762, 1173, 1672
SfcI CTRYAG 2 cut(s) 803, 1994
Sfr303I CCGCGG 1 cut(s) 1434
SgrBI CCGCGG 1 cut(s) 1434
SmiMI CAYNNNNRTG 1 cut(s) 1401
SmlI CTYRAG 3 cut(s) 1554, 1667, 1857
SmoI CTYRAG 3 cut(s) 1554, 1667, 1857
SpeI ACTAGT 1 cut(s) 1936
SsiI CCGC 4 cut(s) 698, 1154, 1431, 1433
SspI AATATT 1 cut(s) 548
SspMI CTAG 3 cut(s) 936, 1361, 1937
StyD4I CCNGG 2 cut(s) 552, 859
StyI CCWWGG 2 cut(s) 825, 1101
TaaI ACNGT 4 cut(s) 229, 591, 737, 1490
TaiI ACGT 2 cut(s) 182, 1779
TaqI TCGA 3 cut(s) 730, 1527, 1921
TatI WGTACW 1 cut(s) 1519
TfiI GAWTC 4 cut(s) 191, 455, 727, 1562
Tru1I TTAA 7 cut(s) 72, 675, 744, 815, 954, 989, 1973
Tru9I TTAA 7 cut(s) 72, 675, 744, 815, 954, 989, 1973
TscAI CASTG 2 cut(s) 414, 852
TseFI GTSAC 2 cut(s) 63, 1772
TseI GCWGC 4 cut(s) 13, 602, 1657, 1660
Tsp45I GTSAC 2 cut(s) 63, 1772
TspDTI ATGAA 8 cut(s) 317, 452, 813, 857, 1191, 1431, 1635, 1658
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 2 cut(s) 414, 852
Tth111I GACNNNGTC 2 cut(s) 690, 1885
Van91I CCANNNNNTGG 1 cut(s) 1261
XapI RAATTY 2 cut(s) 1138, 1810
XceI RCATGY 1 cut(s) 264
XmiI GTMKAC 2 cut(s) 694, 1201
XmnI GAANNNNTTC 2 cut(s) 195, 459
XspI CTAG 3 cut(s) 936, 1361, 1937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.