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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40520 AT5G40520 |
| fragaria_vesca | FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 FvH4_1g27220 |
| malus_domestica | MD04G1046800.v1.1 |
| prunus_persica | Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 Prupe.8G045700_v2.0.a1 |
| pyrus_communis | pycom04g04060 |
| rosa_chinensis | RchiOBHm_Chr3g0487611 |
| rosa_laevigata | RLG00000022996 |
| rosa_multiflora | Rmu_sc0012412.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00394650 |
| rosa_rugosa | Rorug03G0235000 Rorug03G0235100 Rorug03G0235100 |
| rosa_samantha | Rh3AG283300 Rh3BG319000 Rh3CG317100 Rh3DG315300 |
| rosa_wichuraiana | Rw3G025050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1261 |
| AccI | GTMKAC | 2 cut(s) | 694, 1201 |
| AccII | CGCG | 1 cut(s) | 1433 |
| AccIII | TCCGGA | 1 cut(s) | 329 |
| AciI | CCGC | 4 cut(s) | 698, 1154, 1431, 1433 |
| AcsI | RAATTY | 2 cut(s) | 1138, 1810 |
| AcuI | CTGAAG | 2 cut(s) | 869, 1001 |
| AcvI | CACGTG | 2 cut(s) | 180, 1777 |
| AfaI | GTAC | 3 cut(s) | 1429, 1521, 1941 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1261 |
| AflIII | ACRYGT | 3 cut(s) | 177, 179, 1776 |
| AgsI | TTSAA | 9 cut(s) | 172, 272, 293, 767, 789, 1184, 1613, 1727, 1810 |
| AhlI | ACTAGT | 1 cut(s) | 1936 |
| AjnI | CCWGG | 2 cut(s) | 552, 859 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1529, 1561 |
| AluBI | AGCT | 8 cut(s) | 16, 97, 251, 673, 935, 979, 1421, 1657 |
| AluI | AGCT | 8 cut(s) | 16, 97, 251, 673, 935, 979, 1421, 1657 |
| Alw21I | GWGCWC | 1 cut(s) | 1219 |
| Alw26I | GTCTC | 6 cut(s) | 218, 597, 641, 726, 1736, 1893 |
| Aor13HI | TCCGGA | 1 cut(s) | 329 |
| AoxI | GGCC | 2 cut(s) | 707, 1987 |
| ApeKI | GCWGC | 4 cut(s) | 13, 602, 1657, 1660 |
| ApoI | RAATTY | 2 cut(s) | 1138, 1810 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 236, 268, 1789, 1821 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 195, 459 |
| AspS9I | GGNCC | 1 cut(s) | 1987 |
| AsuHPI | GGTGA | 5 cut(s) | 806, 884, 1094, 1346, 1856 |
| BbrPI | CACGTG | 2 cut(s) | 180, 1777 |
| BbsI | GAAGAC | 1 cut(s) | 484 |
| Bbv12I | GWGCWC | 1 cut(s) | 1219 |
| BbvI | GCAGC | 4 cut(s) | 25, 589, 1644, 1647 |
| BccI | CCATC | 4 cut(s) | 617, 1364, 1592, 1898 |
| BceAI | ACGGC | 1 cut(s) | 722 |
| BciT130I | CCWGG | 2 cut(s) | 554, 861 |
| BciVI | GTATCC | 1 cut(s) | 1084 |
| BclI | TGATCA | 1 cut(s) | 1318 |
| BcoDI | GTCTC | 6 cut(s) | 218, 597, 641, 726, 1736, 1893 |
| BcuI | ACTAGT | 1 cut(s) | 1936 |
| BfaI | CTAG | 3 cut(s) | 936, 1361, 1937 |
| BfmI | CTRYAG | 2 cut(s) | 803, 1994 |
| BfuI | GTATCC | 1 cut(s) | 1084 |
| BglII | AGATCT | 1 cut(s) | 1391 |
| BisI | GCNGC | 4 cut(s) | 14, 603, 1658, 1661 |
| BlsI | GCNGC | 4 cut(s) | 15, 604, 1659, 1662 |
| Bme1390I | CCNGG | 2 cut(s) | 554, 861 |
| BmgT120I | GGNCC | 1 cut(s) | 1987 |
| BmiI | GGNNCC | 3 cut(s) | 334, 810, 1539 |
| BmrFI | CCNGG | 2 cut(s) | 554, 861 |
| BmrI | ACTGGG | 1 cut(s) | 1828 |
| BmsI | GCATC | 3 cut(s) | 762, 1173, 1672 |
| BmuI | ACTGGG | 1 cut(s) | 1828 |
| BpiI | GAAGAC | 1 cut(s) | 484 |
| BpmI | CTGGAG | 2 cut(s) | 565, 1558 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1218 |
| BpuEI | CTTGAG | 3 cut(s) | 1539, 1652, 1842 |
| BsaAI | YACGTR | 2 cut(s) | 180, 1777 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1317 |
| BsaI | GGTCTC | 1 cut(s) | 641 |
| BsaJI | CCNNGG | 3 cut(s) | 825, 1101, 1431 |
| BsaWI | WCCGGW | 1 cut(s) | 329 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1261 |
| Bse1I | ACTGG | 3 cut(s) | 1575, 1642, 1823 |
| Bse3DI | GCAATG | 1 cut(s) | 666 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1317 |
| BseAI | TCCGGA | 1 cut(s) | 329 |
| BseBI | CCWGG | 2 cut(s) | 554, 861 |
| BseDI | CCNNGG | 3 cut(s) | 825, 1101, 1431 |
| BseGI | GGATG | 3 cut(s) | 628, 931, 1828 |
| BseJI | GATNNNNATC | 1 cut(s) | 1317 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1261 |
| BseMI | GCAATG | 1 cut(s) | 666 |
| BseMII | CTCAG | 5 cut(s) | 129, 420, 643, 1232, 1852 |
| BseNI | ACTGG | 3 cut(s) | 1575, 1642, 1823 |
| BseRI | GAGGAG | 1 cut(s) | 1799 |
| BseXI | GCAGC | 4 cut(s) | 25, 589, 1644, 1647 |
| Bsh1236I | CGCG | 1 cut(s) | 1433 |
| BshFI | GGCC | 2 cut(s) | 709, 1989 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1219 |
| BsiSI | CCGG | 2 cut(s) | 188, 330 |
| BslFI | GGGAC | 3 cut(s) | 40, 647, 1231 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1261 |
| BsmAI | GTCTC | 6 cut(s) | 218, 597, 641, 726, 1736, 1893 |
| BsmFI | GGGAC | 3 cut(s) | 40, 647, 1231 |
| BsnI | GGCC | 2 cut(s) | 709, 1989 |
| Bso31I | GGTCTC | 1 cut(s) | 641 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1219 |
| Bsp13I | TCCGGA | 1 cut(s) | 329 |
| Bsp143I | GATC | 3 cut(s) | 8, 1318, 1391 |
| Bsp19I | CCATGG | 1 cut(s) | 825 |
| BspACI | CCGC | 4 cut(s) | 698, 1154, 1431, 1433 |
| BspANI | GGCC | 2 cut(s) | 709, 1989 |
| BspCNI | CTCAG | 5 cut(s) | 130, 419, 642, 1231, 1851 |
| BspEI | TCCGGA | 1 cut(s) | 329 |
| BspFNI | CGCG | 1 cut(s) | 1433 |
| BspLI | GGNNCC | 3 cut(s) | 334, 810, 1539 |
| BspMAI | CTGCAG | 1 cut(s) | 807 |
| BspTNI | GGTCTC | 1 cut(s) | 641 |
| BsrDI | GCAATG | 1 cut(s) | 666 |
| BsrI | ACTGG | 3 cut(s) | 1575, 1642, 1823 |
| BssECI | CCNNGG | 3 cut(s) | 825, 1101, 1431 |
| BssMI | GATC | 3 cut(s) | 8, 1318, 1391 |
| BssNAI | GTATAC | 1 cut(s) | 1202 |
| BssT1I | CCWWGG | 2 cut(s) | 825, 1101 |
| Bst1107I | GTATAC | 1 cut(s) | 1202 |
| Bst2UI | CCWGG | 2 cut(s) | 554, 861 |
| Bst4CI | ACNGT | 4 cut(s) | 229, 591, 737, 1490 |
| Bst6I | CTCTTC | 1 cut(s) | 465 |
| BstBAI | YACGTR | 2 cut(s) | 180, 1777 |
| BstC8I | GCNNGC | 1 cut(s) | 1457 |
| BstDEI | CTNAG | 8 cut(s) | 138, 200, 395, 406, 629, 711, 1218, 1838 |
| BstDSI | CCRYGG | 2 cut(s) | 825, 1431 |
| BstF5I | GGATG | 3 cut(s) | 628, 931, 1828 |
| BstFNI | CGCG | 1 cut(s) | 1433 |
| BstKTI | GATC | 3 cut(s) | 11, 1321, 1394 |
| BstMAI | GTCTC | 6 cut(s) | 218, 597, 641, 726, 1736, 1893 |
| BstMBI | GATC | 3 cut(s) | 8, 1318, 1391 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 94, 257, 670, 706, 1669, 1967 |
| BstNI | CCWGG | 2 cut(s) | 554, 861 |
| BstNSI | RCATGY | 1 cut(s) | 264 |
| BstSCI | CCNGG | 2 cut(s) | 552, 859 |
| BstSFI | CTRYAG | 2 cut(s) | 803, 1994 |
| BstUI | CGCG | 1 cut(s) | 1433 |
| BstV1I | GCAGC | 4 cut(s) | 25, 589, 1644, 1647 |
| BstV2I | GAAGAC | 1 cut(s) | 484 |
| BstX2I | RGATCY | 1 cut(s) | 1391 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 826 |
| BstYI | RGATCY | 1 cut(s) | 1391 |
| BstZ17I | GTATAC | 1 cut(s) | 1202 |
| BsuI | GTATCC | 1 cut(s) | 1084 |
| BsuRI | GGCC | 2 cut(s) | 709, 1989 |
| BtgI | CCRYGG | 2 cut(s) | 825, 1431 |
| BtsCI | GGATG | 3 cut(s) | 628, 931, 1828 |
| BtsIMutI | CAGTG | 2 cut(s) | 414, 845 |
| Cac8I | GCNNGC | 1 cut(s) | 1457 |
| Cfr13I | GGNCC | 1 cut(s) | 1987 |
| Cfr42I | CCGCGG | 1 cut(s) | 1434 |
| CseI | GACGC | 4 cut(s) | 323, 411, 1170, 1289 |
| CsiI | ACCWGGT | 1 cut(s) | 859 |
| Csp6I | GTAC | 3 cut(s) | 1428, 1520, 1940 |
| CviAII | CATG | 7 cut(s) | 261, 345, 599, 826, 1256, 1543, 1619 |
| CviQI | GTAC | 3 cut(s) | 1428, 1520, 1940 |
| DdeI | CTNAG | 8 cut(s) | 138, 200, 395, 406, 629, 711, 1218, 1838 |
| DpnI | GATC | 3 cut(s) | 10, 1320, 1393 |
| DpnII | GATC | 3 cut(s) | 8, 1318, 1391 |
| Eam1104I | CTCTTC | 1 cut(s) | 465 |
| EarI | CTCTTC | 1 cut(s) | 465 |
| Eco130I | CCWWGG | 2 cut(s) | 825, 1101 |
| Eco31I | GGTCTC | 1 cut(s) | 641 |
| Eco32I | GATATC | 1 cut(s) | 522 |
| Eco57I | CTGAAG | 2 cut(s) | 869, 1001 |
| Eco72I | CACGTG | 2 cut(s) | 180, 1777 |
| EcoRI | GAATTC | 1 cut(s) | 1138 |
| EcoRII | CCWGG | 2 cut(s) | 552, 859 |
| EcoRV | GATATC | 1 cut(s) | 522 |
| EcoT14I | CCWWGG | 2 cut(s) | 825, 1101 |
| ErhI | CCWWGG | 2 cut(s) | 825, 1101 |
| FaeI | CATG | 7 cut(s) | 264, 348, 602, 829, 1259, 1546, 1622 |
| FaqI | GGGAC | 3 cut(s) | 40, 647, 1231 |
| FatI | CATG | 7 cut(s) | 260, 344, 598, 825, 1255, 1542, 1618 |
| FauNDI | CATATG | 1 cut(s) | 1684 |
| FbaI | TGATCA | 1 cut(s) | 1318 |
| FblI | GTMKAC | 2 cut(s) | 694, 1201 |
| Fnu4HI | GCNGC | 4 cut(s) | 14, 603, 1658, 1661 |
| FokI | GGATG | 3 cut(s) | 635, 938, 1835 |
| Fsp4HI | GCNGC | 4 cut(s) | 14, 603, 1658, 1661 |
| FspBI | CTAG | 3 cut(s) | 936, 1361, 1937 |
| GluI | GCNGC | 4 cut(s) | 14, 603, 1658, 1661 |
| GsuI | CTGGAG | 2 cut(s) | 565, 1558 |
| HaeIII | GGCC | 2 cut(s) | 709, 1989 |
| HapII | CCGG | 2 cut(s) | 188, 330 |
| HgaI | GACGC | 4 cut(s) | 323, 411, 1170, 1289 |
| Hin1II | CATG | 7 cut(s) | 264, 348, 602, 829, 1259, 1546, 1622 |
| HincII | GTYRAC | 2 cut(s) | 244, 1440 |
| HindII | GTYRAC | 2 cut(s) | 244, 1440 |
| HindIII | AAGCTT | 1 cut(s) | 671 |
| HinfI | GANTC | 9 cut(s) | 53, 191, 455, 627, 727, 994, 1436, 1562, 1571 |
| HpaII | CCGG | 2 cut(s) | 188, 330 |
| HphI | GGTGA | 5 cut(s) | 806, 884, 1094, 1346, 1856 |
| Hpy166II | GTNNAC | 6 cut(s) | 244, 695, 1151, 1202, 1440, 1520 |
| Hpy188I | TCNGA | 4 cut(s) | 139, 452, 781, 1841 |
| Hpy188III | TCNNGA | 9 cut(s) | 169, 293, 330, 582, 731, 1568, 1727, 1859, 1892 |
| Hpy8I | GTNNAC | 6 cut(s) | 244, 695, 1151, 1202, 1440, 1520 |
| HpyAV | CCTTC | 4 cut(s) | 266, 1724, 1796, 1953 |
| HpyCH4III | ACNGT | 4 cut(s) | 229, 591, 737, 1490 |
| HpyCH4IV | ACGT | 2 cut(s) | 179, 1776 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 94, 257, 670, 706, 1669, 1967 |
| HpyF3I | CTNAG | 8 cut(s) | 138, 200, 395, 406, 629, 711, 1218, 1838 |
| HpySE526I | ACGT | 2 cut(s) | 179, 1776 |
| Hsp92II | CATG | 7 cut(s) | 264, 348, 602, 829, 1259, 1546, 1622 |
| Kpn2I | TCCGGA | 1 cut(s) | 329 |
| Ksp22I | TGATCA | 1 cut(s) | 1318 |
| KspI | CCGCGG | 1 cut(s) | 1434 |
| Kzo9I | GATC | 3 cut(s) | 8, 1318, 1391 |
| LmnI | GCTCC | 3 cut(s) | 257, 332, 808 |
| Lsp1109I | GCAGC | 4 cut(s) | 25, 589, 1644, 1647 |
| LweI | GCATC | 3 cut(s) | 762, 1173, 1672 |
| MabI | ACCWGGT | 1 cut(s) | 859 |
| MaeI | CTAG | 3 cut(s) | 936, 1361, 1937 |
| MaeII | ACGT | 2 cut(s) | 179, 1776 |
| MaeIII | GTNAC | 2 cut(s) | 63, 1772 |
| MalI | GATC | 3 cut(s) | 10, 1320, 1393 |
| MboI | GATC | 3 cut(s) | 8, 1318, 1391 |
| MfeI | CAATTG | 1 cut(s) | 762 |
| MflI | RGATCY | 1 cut(s) | 1391 |
| MhlI | GDGCHC | 1 cut(s) | 1219 |
| MlyI | GAGTC | 5 cut(s) | 62, 621, 988, 1445, 1565 |
| MmeI | TCCRAC | 3 cut(s) | 132, 410, 1761 |
| MroI | TCCGGA | 1 cut(s) | 329 |
| MroXI | GAANNNNTTC | 2 cut(s) | 195, 459 |
| MseI | TTAA | 7 cut(s) | 72, 675, 744, 815, 954, 989, 1973 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1401 |
| MspA1I | CMGCKG | 1 cut(s) | 1433 |
| MspI | CCGG | 2 cut(s) | 188, 330 |
| MspR9I | CCNGG | 2 cut(s) | 554, 861 |
| MunI | CAATTG | 1 cut(s) | 762 |
| MvaI | CCWGG | 2 cut(s) | 554, 861 |
| MvnI | CGCG | 1 cut(s) | 1433 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 94, 257, 670, 706, 1669, 1967 |
| NcoI | CCATGG | 1 cut(s) | 825 |
| NdeI | CATATG | 1 cut(s) | 1684 |
| NdeII | GATC | 3 cut(s) | 8, 1318, 1391 |
| NlaIII | CATG | 7 cut(s) | 264, 348, 602, 829, 1259, 1546, 1622 |
| NlaIV | GGNNCC | 3 cut(s) | 334, 810, 1539 |
| NmuCI | GTSAC | 2 cut(s) | 63, 1772 |
| NspI | RCATGY | 1 cut(s) | 264 |
| PdmI | GAANNNNTTC | 2 cut(s) | 195, 459 |
| PfeI | GAWTC | 4 cut(s) | 191, 455, 727, 1562 |
| PflFI | GACNNNGTC | 2 cut(s) | 690, 1885 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1261 |
| PfoI | TCCNGGA | 1 cut(s) | 552 |
| PkrI | GCNGC | 4 cut(s) | 15, 604, 1659, 1662 |
| PleI | GAGTC | 5 cut(s) | 61, 621, 988, 1444, 1565 |
| PmaCI | CACGTG | 2 cut(s) | 180, 1777 |
| PmlI | CACGTG | 2 cut(s) | 180, 1777 |
| PpsI | GAGTC | 5 cut(s) | 61, 621, 988, 1444, 1565 |
| Ppu21I | YACGTR | 2 cut(s) | 180, 1777 |
| Psp6I | CCWGG | 2 cut(s) | 552, 859 |
| PspCI | CACGTG | 2 cut(s) | 180, 1777 |
| PspGI | CCWGG | 2 cut(s) | 552, 859 |
| PspN4I | GGNNCC | 3 cut(s) | 334, 810, 1539 |
| PspPI | GGNCC | 1 cut(s) | 1987 |
| PstI | CTGCAG | 1 cut(s) | 807 |
| PsuI | RGATCY | 1 cut(s) | 1391 |
| PsyI | GACNNNGTC | 2 cut(s) | 690, 1885 |
| RsaI | GTAC | 3 cut(s) | 1429, 1521, 1941 |
| RsaNI | GTAC | 3 cut(s) | 1428, 1520, 1940 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1401 |
| SacII | CCGCGG | 1 cut(s) | 1434 |
| SaqAI | TTAA | 7 cut(s) | 72, 675, 744, 815, 954, 989, 1973 |
| SatI | GCNGC | 4 cut(s) | 14, 603, 1658, 1661 |
| Sau3AI | GATC | 3 cut(s) | 8, 1318, 1391 |
| Sau96I | GGNCC | 1 cut(s) | 1987 |
| SchI | GAGTC | 5 cut(s) | 62, 621, 988, 1445, 1565 |
| ScrFI | CCNGG | 2 cut(s) | 554, 861 |
| SduI | GDGCHC | 1 cut(s) | 1219 |
| SexAI | ACCWGGT | 1 cut(s) | 859 |
| SfaNI | GCATC | 3 cut(s) | 762, 1173, 1672 |
| SfcI | CTRYAG | 2 cut(s) | 803, 1994 |
| Sfr303I | CCGCGG | 1 cut(s) | 1434 |
| SgrBI | CCGCGG | 1 cut(s) | 1434 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1401 |
| SmlI | CTYRAG | 3 cut(s) | 1554, 1667, 1857 |
| SmoI | CTYRAG | 3 cut(s) | 1554, 1667, 1857 |
| SpeI | ACTAGT | 1 cut(s) | 1936 |
| SsiI | CCGC | 4 cut(s) | 698, 1154, 1431, 1433 |
| SspI | AATATT | 1 cut(s) | 548 |
| SspMI | CTAG | 3 cut(s) | 936, 1361, 1937 |
| StyD4I | CCNGG | 2 cut(s) | 552, 859 |
| StyI | CCWWGG | 2 cut(s) | 825, 1101 |
| TaaI | ACNGT | 4 cut(s) | 229, 591, 737, 1490 |
| TaiI | ACGT | 2 cut(s) | 182, 1779 |
| TaqI | TCGA | 3 cut(s) | 730, 1527, 1921 |
| TatI | WGTACW | 1 cut(s) | 1519 |
| TfiI | GAWTC | 4 cut(s) | 191, 455, 727, 1562 |
| Tru1I | TTAA | 7 cut(s) | 72, 675, 744, 815, 954, 989, 1973 |
| Tru9I | TTAA | 7 cut(s) | 72, 675, 744, 815, 954, 989, 1973 |
| TscAI | CASTG | 2 cut(s) | 414, 852 |
| TseFI | GTSAC | 2 cut(s) | 63, 1772 |
| TseI | GCWGC | 4 cut(s) | 13, 602, 1657, 1660 |
| Tsp45I | GTSAC | 2 cut(s) | 63, 1772 |
| TspDTI | ATGAA | 8 cut(s) | 317, 452, 813, 857, 1191, 1431, 1635, 1658 |
| TspGWI | ACGGA | 1 cut(s) | 59 |
| TspRI | CASTG | 2 cut(s) | 414, 852 |
| Tth111I | GACNNNGTC | 2 cut(s) | 690, 1885 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1261 |
| XapI | RAATTY | 2 cut(s) | 1138, 1810 |
| XceI | RCATGY | 1 cut(s) | 264 |
| XmiI | GTMKAC | 2 cut(s) | 694, 1201 |
| XmnI | GAANNNNTTC | 2 cut(s) | 195, 459 |
| XspI | CTAG | 3 cut(s) | 936, 1361, 1937 |