deficiency-induced
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48850 |
| fragaria_vesca | FvH4_2g19310 FvH4_2g19310 |
| malus_domestica | MD05G1178100.v1.1 MD10G1166300.v1.1 |
| prunus_persica | Prupe.8G204700_v2.0.a1 |
| pyrus_communis | pycom05g16440 pycom10g14340 |
| rosa_chinensis | RchiOBHm_Chr6g0285121 |
| rosa_laevigata | RLG00000012671 |
| rosa_multiflora | Rmu_sc0002535.1_g000032 Rmu_sc0003797.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00183650 Rroxscaffold_7G00184020 |
| rosa_rugosa | Rorug06G0171300 |
| rosa_samantha | Rh6BG283100 Rh6CG285000 Rh6DG278100 |
| rosa_wichuraiana | Rw6G024280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 36 |
| Acc36I | ACCTGC | 1 cut(s) | 633 |
| AccBSI | CCGCTC | 1 cut(s) | 452 |
| AccI | GTMKAC | 2 cut(s) | 210, 567 |
| AciI | CCGC | 3 cut(s) | 450, 563, 701 |
| AcoI | YGGCCR | 1 cut(s) | 555 |
| AcsI | RAATTY | 1 cut(s) | 310 |
| AcuI | CTGAAG | 1 cut(s) | 282 |
| AfaI | GTAC | 1 cut(s) | 548 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AgsI | TTSAA | 7 cut(s) | 16, 275, 391, 430, 476, 488, 836 |
| AhlI | ACTAGT | 1 cut(s) | 851 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 648, 680 |
| AluBI | AGCT | 5 cut(s) | 12, 269, 278, 425, 736 |
| AluI | AGCT | 5 cut(s) | 12, 269, 278, 425, 736 |
| Alw26I | GTCTC | 3 cut(s) | 102, 195, 862 |
| Ama87I | CYCGRG | 1 cut(s) | 680 |
| AoxI | GGCC | 2 cut(s) | 555, 726 |
| ApeKI | GCWGC | 1 cut(s) | 760 |
| ApoI | RAATTY | 1 cut(s) | 310 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 803, 835 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 78, 735 |
| AspS9I | GGNCC | 1 cut(s) | 726 |
| AsuC2I | CCSGG | 1 cut(s) | 158 |
| AsuII | TTCGAA | 1 cut(s) | 882 |
| AvaI | CYCGRG | 1 cut(s) | 680 |
| BaeGI | GKGCMC | 1 cut(s) | 220 |
| BbsI | GAAGAC | 2 cut(s) | 26, 747 |
| BbvI | GCAGC | 1 cut(s) | 747 |
| BccI | CCATC | 4 cut(s) | 157, 197, 577, 778 |
| BcnI | CCSGG | 1 cut(s) | 158 |
| BcoDI | GTCTC | 3 cut(s) | 102, 195, 862 |
| BcuI | ACTAGT | 1 cut(s) | 851 |
| BfaI | CTAG | 2 cut(s) | 852, 919 |
| BfuAI | ACCTGC | 1 cut(s) | 633 |
| BglII | AGATCT | 2 cut(s) | 408, 888 |
| BisI | GCNGC | 1 cut(s) | 761 |
| BlsI | GCNGC | 1 cut(s) | 762 |
| BmcAI | AGTACT | 1 cut(s) | 548 |
| Bme1390I | CCNGG | 1 cut(s) | 158 |
| BmeT110I | CYCGRG | 1 cut(s) | 680 |
| BmgT120I | GGNCC | 1 cut(s) | 726 |
| BmrFI | CCNGG | 1 cut(s) | 158 |
| BmrI | ACTGGG | 1 cut(s) | 518 |
| BmsI | GCATC | 3 cut(s) | 586, 759, 766 |
| BmuI | ACTGGG | 1 cut(s) | 518 |
| BpiI | GAAGAC | 2 cut(s) | 26, 747 |
| BpmI | CTGGAG | 1 cut(s) | 219 |
| Bpu14I | TTCGAA | 1 cut(s) | 882 |
| BpuEI | CTTGAG | 2 cut(s) | 206, 484 |
| BpuMI | CCSGG | 1 cut(s) | 158 |
| BsaJI | CCNNGG | 2 cut(s) | 460, 764 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 192, 222 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| Bse1I | ACTGG | 2 cut(s) | 202, 513 |
| BseDI | CCNNGG | 2 cut(s) | 460, 764 |
| BseGI | GGATG | 4 cut(s) | 709, 774, 796, 845 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseMII | CTCAG | 3 cut(s) | 152, 731, 771 |
| BseNI | ACTGG | 2 cut(s) | 202, 513 |
| BseRI | GAGGAG | 2 cut(s) | 386, 665 |
| BseSI | GKGCMC | 1 cut(s) | 220 |
| BseX3I | CGGCCG | 1 cut(s) | 555 |
| BseXI | GCAGC | 1 cut(s) | 747 |
| Bsh1285I | CGRYCG | 1 cut(s) | 558 |
| BshFI | GGCC | 2 cut(s) | 557, 728 |
| BsiEI | CGRYCG | 1 cut(s) | 558 |
| BsiHKCI | CYCGRG | 1 cut(s) | 680 |
| BsiSI | CCGG | 1 cut(s) | 158 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BsmAI | GTCTC | 3 cut(s) | 102, 195, 862 |
| BsnI | GGCC | 2 cut(s) | 557, 728 |
| BsoBI | CYCGRG | 1 cut(s) | 680 |
| Bsp119I | TTCGAA | 1 cut(s) | 882 |
| Bsp1286I | GDGCHC | 1 cut(s) | 220 |
| Bsp143I | GATC | 2 cut(s) | 408, 888 |
| BspACI | CCGC | 3 cut(s) | 450, 563, 701 |
| BspANI | GGCC | 2 cut(s) | 557, 728 |
| BspCNI | CTCAG | 3 cut(s) | 151, 732, 772 |
| BspMI | ACCTGC | 1 cut(s) | 633 |
| BspQI | GCTCTTC | 1 cut(s) | 726 |
| BspT104I | TTCGAA | 1 cut(s) | 882 |
| BsrBI | CCGCTC | 1 cut(s) | 452 |
| BsrI | ACTGG | 2 cut(s) | 202, 513 |
| BssECI | CCNNGG | 2 cut(s) | 460, 764 |
| BssMI | GATC | 2 cut(s) | 408, 888 |
| BssNAI | GTATAC | 1 cut(s) | 568 |
| Bst1107I | GTATAC | 1 cut(s) | 568 |
| Bst4CI | ACNGT | 3 cut(s) | 215, 257, 484 |
| Bst6I | CTCTTC | 3 cut(s) | 386, 726, 831 |
| BstBI | TTCGAA | 1 cut(s) | 882 |
| BstC8I | GCNNGC | 1 cut(s) | 454 |
| BstDEI | CTNAG | 5 cut(s) | 138, 740, 780, 808, 864 |
| BstDSI | CCRYGG | 2 cut(s) | 460, 764 |
| BstF5I | GGATG | 4 cut(s) | 709, 774, 796, 845 |
| BstKTI | GATC | 2 cut(s) | 411, 891 |
| BstMAI | GTCTC | 3 cut(s) | 102, 195, 862 |
| BstMBI | GATC | 2 cut(s) | 408, 888 |
| BstMCI | CGRYCG | 1 cut(s) | 558 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 134, 275, 769 |
| BstNSI | RCATGY | 1 cut(s) | 137 |
| BstSCI | CCNGG | 1 cut(s) | 156 |
| BstSLI | GKGCMC | 1 cut(s) | 220 |
| BstV1I | GCAGC | 1 cut(s) | 747 |
| BstV2I | GAAGAC | 2 cut(s) | 26, 747 |
| BstX2I | RGATCY | 2 cut(s) | 408, 888 |
| BstYI | RGATCY | 2 cut(s) | 408, 888 |
| BstZ17I | GTATAC | 1 cut(s) | 568 |
| BstZI | CGGCCG | 1 cut(s) | 555 |
| BsuRI | GGCC | 2 cut(s) | 557, 728 |
| BtgI | CCRYGG | 2 cut(s) | 460, 764 |
| BtgZI | GCGATG | 1 cut(s) | 635 |
| BtsCI | GGATG | 4 cut(s) | 709, 774, 796, 845 |
| BtsIMutI | CAGTG | 2 cut(s) | 195, 220 |
| BveI | ACCTGC | 1 cut(s) | 633 |
| Cac8I | GCNNGC | 1 cut(s) | 454 |
| Cfr13I | GGNCC | 1 cut(s) | 726 |
| Csp6I | GTAC | 1 cut(s) | 547 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 340, 375 |
| CviAII | CATG | 3 cut(s) | 83, 134, 229 |
| CviQI | GTAC | 1 cut(s) | 547 |
| DdeI | CTNAG | 5 cut(s) | 138, 740, 780, 808, 864 |
| DpnI | GATC | 2 cut(s) | 410, 890 |
| DpnII | GATC | 2 cut(s) | 408, 888 |
| DraI | TTTAAA | 1 cut(s) | 859 |
| EaeI | YGGCCR | 1 cut(s) | 555 |
| EagI | CGGCCG | 1 cut(s) | 555 |
| Eam1104I | CTCTTC | 3 cut(s) | 386, 726, 831 |
| EarI | CTCTTC | 3 cut(s) | 386, 726, 831 |
| EclXI | CGGCCG | 1 cut(s) | 555 |
| Eco52I | CGGCCG | 1 cut(s) | 555 |
| Eco57I | CTGAAG | 1 cut(s) | 282 |
| Eco88I | CYCGRG | 1 cut(s) | 680 |
| EcoRI | GAATTC | 1 cut(s) | 310 |
| FaeI | CATG | 3 cut(s) | 86, 137, 232 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 309, 341 |
| FatI | CATG | 3 cut(s) | 82, 133, 228 |
| FblI | GTMKAC | 2 cut(s) | 210, 567 |
| Fnu4HI | GCNGC | 1 cut(s) | 761 |
| FokI | GGATG | 4 cut(s) | 716, 781, 803, 832 |
| Fsp4HI | GCNGC | 1 cut(s) | 761 |
| FspBI | CTAG | 2 cut(s) | 852, 919 |
| GluI | GCNGC | 1 cut(s) | 761 |
| GsuI | CTGGAG | 1 cut(s) | 219 |
| HaeIII | GGCC | 2 cut(s) | 557, 728 |
| HapII | CCGG | 1 cut(s) | 158 |
| Hin1II | CATG | 3 cut(s) | 86, 137, 232 |
| HindIII | AAGCTT | 2 cut(s) | 10, 423 |
| HinfI | GANTC | 4 cut(s) | 88, 320, 752, 870 |
| HpaII | CCGG | 1 cut(s) | 158 |
| Hpy166II | GTNNAC | 3 cut(s) | 211, 437, 568 |
| Hpy188I | TCNGA | 3 cut(s) | 125, 262, 741 |
| Hpy188III | TCNNGA | 3 cut(s) | 501, 668, 680 |
| Hpy8I | GTNNAC | 3 cut(s) | 211, 437, 568 |
| HpyCH4III | ACNGT | 3 cut(s) | 215, 257, 484 |
| HpyCH4V | TGCA | 2 cut(s) | 535, 612 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 134, 275, 769 |
| HpyF3I | CTNAG | 5 cut(s) | 138, 740, 780, 808, 864 |
| Hsp92II | CATG | 3 cut(s) | 86, 137, 232 |
| Kzo9I | GATC | 2 cut(s) | 408, 888 |
| LguI | GCTCTTC | 1 cut(s) | 726 |
| LmnI | GCTCC | 2 cut(s) | 373, 461 |
| LpnPI | CCDG | 7 cut(s) | 115, 171, 183, 494, 593, 606, 628 |
| Lsp1109I | GCAGC | 1 cut(s) | 747 |
| LweI | GCATC | 3 cut(s) | 586, 759, 766 |
| MaeI | CTAG | 2 cut(s) | 852, 919 |
| MaeIII | GTNAC | 2 cut(s) | 478, 512 |
| MalI | GATC | 2 cut(s) | 410, 890 |
| MbiI | CCGCTC | 1 cut(s) | 452 |
| MboI | GATC | 2 cut(s) | 408, 888 |
| MflI | RGATCY | 2 cut(s) | 408, 888 |
| MhlI | GDGCHC | 1 cut(s) | 220 |
| MluCI | AATT | 5 cut(s) | 31, 74, 310, 398, 746 |
| MlyI | GAGTC | 2 cut(s) | 761, 864 |
| MnlI | CCTC | 8 cut(s) | 230, 306, 347, 364, 387, 643, 646, 781 |
| MroXI | GAANNNNTTC | 2 cut(s) | 78, 735 |
| MseI | TTAA | 2 cut(s) | 401, 858 |
| MspI | CCGG | 1 cut(s) | 158 |
| MspR9I | CCNGG | 1 cut(s) | 158 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 134, 275, 769 |
| NciI | CCSGG | 1 cut(s) | 158 |
| NdeII | GATC | 2 cut(s) | 408, 888 |
| NlaIII | CATG | 3 cut(s) | 86, 137, 232 |
| NmuCI | GTSAC | 1 cut(s) | 478 |
| NspI | RCATGY | 1 cut(s) | 137 |
| NspV | TTCGAA | 1 cut(s) | 882 |
| PaeR7I | CTCGAG | 1 cut(s) | 680 |
| PciSI | GCTCTTC | 1 cut(s) | 726 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 678 |
| PdmI | GAANNNNTTC | 2 cut(s) | 78, 735 |
| PfeI | GAWTC | 2 cut(s) | 88, 320 |
| PflFI | GACNNNGTC | 1 cut(s) | 332 |
| PkrI | GCNGC | 1 cut(s) | 762 |
| PleI | GAGTC | 2 cut(s) | 760, 864 |
| PpsI | GAGTC | 2 cut(s) | 760, 864 |
| PsiI | TTATAA | 1 cut(s) | 36 |
| PspPI | GGNCC | 1 cut(s) | 726 |
| PsuI | RGATCY | 2 cut(s) | 408, 888 |
| PsyI | GACNNNGTC | 1 cut(s) | 332 |
| RsaI | GTAC | 1 cut(s) | 548 |
| RsaNI | GTAC | 1 cut(s) | 547 |
| SapI | GCTCTTC | 1 cut(s) | 726 |
| SaqAI | TTAA | 2 cut(s) | 401, 858 |
| SatI | GCNGC | 1 cut(s) | 761 |
| Sau3AI | GATC | 2 cut(s) | 408, 888 |
| Sau96I | GGNCC | 1 cut(s) | 726 |
| ScaI | AGTACT | 1 cut(s) | 548 |
| SchI | GAGTC | 2 cut(s) | 761, 864 |
| ScrFI | CCNGG | 1 cut(s) | 158 |
| SduI | GDGCHC | 1 cut(s) | 220 |
| SetI | ASST | 8 cut(s) | 14, 271, 280, 427, 442, 618, 647, 738 |
| SfaNI | GCATC | 3 cut(s) | 586, 759, 766 |
| Sfr274I | CTCGAG | 1 cut(s) | 680 |
| SfuI | TTCGAA | 1 cut(s) | 882 |
| SlaI | CTCGAG | 1 cut(s) | 680 |
| SmlI | CTYRAG | 3 cut(s) | 221, 499, 680 |
| SmoI | CTYRAG | 3 cut(s) | 221, 499, 680 |
| SpeI | ACTAGT | 1 cut(s) | 851 |
| Sse9I | AATT | 5 cut(s) | 31, 74, 310, 398, 746 |
| SsiI | CCGC | 3 cut(s) | 450, 563, 701 |
| SspMI | CTAG | 2 cut(s) | 852, 919 |
| StyD4I | CCNGG | 1 cut(s) | 156 |
| TaaI | ACNGT | 3 cut(s) | 215, 257, 484 |
| TaqI | TCGA | 3 cut(s) | 342, 681, 882 |
| TasI | AATT | 5 cut(s) | 31, 74, 310, 398, 746 |
| TatI | WGTACW | 1 cut(s) | 546 |
| TfiI | GAWTC | 2 cut(s) | 88, 320 |
| Tru1I | TTAA | 2 cut(s) | 401, 858 |
| Tru9I | TTAA | 2 cut(s) | 401, 858 |
| TscAI | CASTG | 2 cut(s) | 202, 220 |
| TseFI | GTSAC | 1 cut(s) | 478 |
| TseI | GCWGC | 1 cut(s) | 760 |
| Tsp45I | GTSAC | 1 cut(s) | 478 |
| TspDTI | ATGAA | 4 cut(s) | 71, 77, 87, 257 |
| TspGWI | ACGGA | 3 cut(s) | 281, 477, 781 |
| TspRI | CASTG | 2 cut(s) | 202, 220 |
| Tth111I | GACNNNGTC | 1 cut(s) | 332 |
| XapI | RAATTY | 1 cut(s) | 310 |
| XceI | RCATGY | 1 cut(s) | 137 |
| XhoI | CTCGAG | 1 cut(s) | 680 |
| XmiI | GTMKAC | 2 cut(s) | 210, 567 |
| XmnI | GAANNNNTTC | 2 cut(s) | 78, 735 |
| XspI | CTAG | 2 cut(s) | 852, 919 |
| ZrmI | AGTACT | 1 cut(s) | 548 |