Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013822

Physical Location & Seq

Genomic Coordinates Forward (+)

20764096 .. 20768764

Gene Structure 4669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G51070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2838 bp

ATGGAGGTGTTATCTACTTCCTCACCTCTAACGCTTCACTCCCACCGACTCCTCTCTGCTTCTTCTTCTTCTTCACATGTCACCTCCATCGCCGCTTCTTCACTTTCTTCATTCGCTTCTTCATATCTCGGAATCTCCCTTTCTAACCGCACGATCCACCGCTTCTCCACAACTCCGACGAACTTAAGACGATTTCCTCAAAGAAAACGGAAGAAATTCACTCCGATTTCAGCGGTTTTCGAACGGTTCACCGAACGAGCGATCAGAGCTATAATCTTCTCTCAGAAGGAAGCTAAATCGTTGGGAAAAGATATGGTTTACACGCAGCATCTTCTCTTAGGTTTGATCGCTGAGGATCGTGATCCTCAAGGCTTCCTTGGATCCGGTATCACCATCGACAAGGCTCGTGAAGCTGTTTGGAGTATTTGGGACGAAGCTAATTCCGATTCGAAACAGGAGGAAGCTTCTTCTACTTCGTATTCAAAATCGACGGACATGCCTTTCTCTATCAGCACGAAACGAGTCTTTGAAGCTGCGGTTGAGTACTCTAGGACTATGGATTGTCAATATATCGCACCGGAGCATATAGCCGTTGGACTCTTCACCGTTGATGATGGTAGCGCCGGCAGAGTTCTCAAGAGATTGGGAGCAAATATGAATTTGCTCACAGCTGCAGCACTTACAAGACTTAAAGGAGAGATTGCTAAAGATGGAAGAGAGCCATCTTCTTCATCTAAAGGGAGCTTCGAGTCTCCTCCTAGTGGTCGAATTGCTGGTTCTGGACCTGGTGGAAAAAAAGCGAAAAATGTACTGGAACAGTTCTGTGTGGATCTGACAGCACGTGCTAGTGAGGGTCTTATTGATCCTGTTATTGGTCGGGAAAAAGAGGTTCAAAGAGTTATCCAGATACTTTGCCGCAGAACTAAAAACAACCCAATTCTTCTTGGTGAAGCTGGTGTTGGGAAGACTGCCATTGCTGAAGGACTAGCGATTAGTATTGCAGAAGCCAGTGCTCCTGGATTTCTCTTGACGAAACGCATCATGTCCCTGGATATAGGATTGCTAATGGCCGGTGCAAAAGAAAGGGGAGAGCTGGAGGCTCGAGTCACTGCTTTGATAAGCGAGGTTAAAAAATCAGGTAAGGTCATTCTCTTCATAGATGAAGTGCATACACTTATTGGGTCTGGCACAGTTGGAAGAGGGAACAAAGGGTCTGGGCTTGACATTGCTAACCTCTTGAAACCATCACTTGGAAGGGGTGAACTTCAGTGCATTGCATCCACAACCCTTGACGAATTTAGGAGTCAGTTTGAGAAGGACAAAGCCCTTGCAAGGAGATTTCAGCCAGTGTTGATTAACGAGCCAAGCGAGGAAGATGCGGTGAAGATTTTGTTGGGCCTTCGTGAAAAATATGAAGCCCATCACAATTGCAAATATACTATGGAAGCCATAGATGCTGCAGTGTACCTTTCATCACGATATATCGCTGATAGATTTCTTCCAGATAAAGCTATTGATCTCATTGACGAGGCAGGAAGCAGAGCTCGTATTGAAGCTTTTAGGAAGAAAAAGGAGGATGCAATCTGTATCCTATCGAAGCCACCTAATGATTACTGGCAAGAGATCAAAACAGTTCAGGCCATGCACGAAGTGGTTCTCTCAAGCAGGCAAAAGCAGGATGACGGTGATGCCATTTCAGATGAGTCTGGTGAACTAGTTGAAGAGTCTTCTTTGCCACCTGCAGCAGGCGACGATGAGCCTATACTGGTGGGACCTGATGATATTGCAGCCGTTGCATCGGTTTGGTCTGGAATTCCAGTTCAGCAGATCACTGCAGATGAAAGAATGCTTCTTATGAGTCTAGAAGATCAGCTTAGAGGCAGAGTTGTTGGTCAAGATGAGGCGGTAGCTGCCATATCTAGAGCTGTGAAGAGGTCCCGGGTTGGCTTAAAAGATCCCGACCGTCCAATTGCTGCTATGCTTTTCTGTGGACCAACAGGGGTTGGAAAAACGGAGCTTACAAAAGCTCTGGCAGCAAATTATTTTGGCTCGGAAGAATCCATGCTGAGATTGGACATGAGTGAATACATGGAGCGTCATACTGTGAGCAAGCTGATAGGCTCTCCTCCTGGTTATGTTGGCTTTGAAGAAGGTGGAATGCTTACAGAAGCTATCAGGAGACGTCCTTTTACAGTGGTTTTGTTCGATGAAATAGAGAAAGCACATCCGGATATCTTCAATATTCTTCTCCAGCTGTTCGAAGATGGCCATCTAACTGATTCACAGGGAAGGAGAGTATCTTTTAAGAACGCATTGATCATAATGACCTCTAATGTCGGATCATTGGCCATTGCAAAGGGAAGACATGGTTCAATAGGGTTTATCCTCGATGATGATGAAGAGGCAGCATCTTATACCGGAATGAAAGCTTTGGTAGTCGAAGAACTCAAGAACTATTTCCGTCCAGAGTTGTTGAACCGAATAGACGAAATCGTCATTTTCCGACAGCTAGAGAAGGCTCAGATGATGGAGATCTTGAACCTGATGCTACAAGACTTGAAGTCGAGGCTCGTGGCACTCGGAGTTGGTTTAGAGGTGTCTGAACCCGTCAAGGAGCTCATATGCAAACAAGGCTATGATCCAGCTTACGGTGCACGACCACTCCGGAGAACTGTCACAGAGATTGTTGAAGATCCACTCAGTGAAGCCTTTCTTGCCGGGAGCTTCAAGCCTGGTGATACGGCTTTTGTAGTTCTTGATGATACCGGAAACCCATCGGTTCGGACCAAACCAGATTCTTCCACTATACGAGTTACAGACAAAACATCGATCGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009941 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0031967 GO:0031975 GO:0033554 GO:0034214 GO:0034605 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046983 GO:0047484 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050896 GO:0051259 GO:0051716 GO:0065003 GO:0065007 GO:0071840 GO:0080134 GO:1901000 GO:1901002 GO:1902584 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko01100 map01100

Pfam Domains

Protein Families

AAA AAA_2 ClpB_D2-small Clp_N

Protein Analysis

945

Amino Acids

103.23

Weight (kDa)

5.89

Isoelectric Point (pI)

42.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Clp_N	PF02861	82 - 214	1.6e-15	Clp repeat (R) N-terminal domain
AAA	PF00004	313 - 422	8.3e-09	ATPase family associated with various cellular activities (AAA)
AAA_lid_9	PF17871	456 - 535	3e-27	AAA lid domain
AAA_2	PF07724	655 - 831	1.5e-64	AAA domain (Cdc48 subfamily)
AAA	PF00004	660 - 778	3e-06	ATPase family associated with various cellular activities (AAA)
AAA_5	PF07728	660 - 780	3.7e-11	AAA domain (dynein-related subfamily)
ClpB_D2-small	PF10431	837 - 915	5.4e-23	C-terminal, D2-small domain, of ClpB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51070
fragaria_vesca	FvH4_5g10020
malus_domestica	MD06G1128400.v1.1
prunus_persica	Prupe.5G138200_v2.0.a1
pyrus_communis	pycom06g11860
rosa_chinensis	RchiOBHm_Chr7g0188241
rosa_laevigata	RLG00000004715
rosa_multiflora	Rmu_co8357845.1_g000001 Rmu_co8388145.1_g000001 Rmu_sc0008750.1_g000013
rosa_roxburghii	Rroxscaffold_3G00266580
rosa_rugosa	Rorug06G0489400
rosa_samantha	Rh7AG093700 Rh7BG095100 Rh7CG095500 Rh7DG095700
rosa_wichuraiana	Rw7G008070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1747
AasI	GACNNNNNNGTC	1 cut(s)	2492
AatII	GACGTC	1 cut(s)	2185
Acc36I	ACCTGC	1 cut(s)	1747
AccB7I	CCANNNNNTGG	1 cut(s)	1250
AccIII	TCCGGA	2 cut(s)	2227, 2664
AciI	CCGC	8 cut(s)	93, 148, 160, 233, 536, 916, 1379, 1904
AcoI	YGGCCR	3 cut(s)	1068, 2266, 2346
AcsI	RAATTY	4 cut(s)	215, 658, 1295, 1812
AcuI	CTGAAG	2 cut(s)	999, 1250
AcvI	CACGTG	1 cut(s)	842
AcyI	GRCGYC	1 cut(s)	2182
AdeI	CACNNNGTG	2 cut(s)	1651, 2702
AfaI	GTAC	3 cut(s)	545, 810, 1466
AfiI	CCNNNNNNNGG	6 cut(s)	761, 872, 1250, 1332, 1745, 2648
AflII	CTTAAG	1 cut(s)	184
AflIII	ACRYGT	1 cut(s)	76
AhdI	GACNNNNNGTC	1 cut(s)	2560
AhlI	ACTAGT	1 cut(s)	1714
AjnI	CCWGG	5 cut(s)	784, 1015, 1047, 2128, 2731
AjuI	GAANNNNNNNTTGG	4 cut(s)	942, 974, 1376, 1408
AloI	GAACNNNNNNTCC	2 cut(s)	1803, 1835
Alw21I	GWGCWC	4 cut(s)	1015, 1546, 2619, 2656
Alw26I	GTCTC	2 cut(s)	756, 2173
Alw44I	GTGCAC	1 cut(s)	2652
Ama87I	CYCGRG	2 cut(s)	1101, 1938
Aor13HI	TCCGGA	2 cut(s)	2227, 2664
AoxI	GGCC	5 cut(s)	1068, 1396, 1638, 2266, 2346
ApaLI	GTGCAC	1 cut(s)	2652
ApoI	RAATTY	4 cut(s)	215, 658, 1295, 1812
Asp700I	GAANNNNTTC	4 cut(s)	215, 1653, 2456, 2709
AspLEI	GCGC	1 cut(s)	623
AspS9I	GGNCC	6 cut(s)	782, 1396, 1772, 1935, 1991, 2784
AsuC2I	CCSGG	3 cut(s)	1939, 1940, 2719
AsuII	TTCGAA	3 cut(s)	240, 449, 2259
AvaI	CYCGRG	2 cut(s)	1101, 1938
AvaII	GGWCC	5 cut(s)	782, 1772, 1935, 1991, 2784
BaeGI	GKGCMC	1 cut(s)	2656
BalI	TGGCCA	2 cut(s)	2268, 2348
BamHI	GGATCC	1 cut(s)	380
BanII	GRGCYC	2 cut(s)	1546, 2619
BauI	CACGAG	2 cut(s)	405, 2570
BbrPI	CACGTG	1 cut(s)	842
BbsI	GAAGAC	3 cut(s)	971, 1719, 2368
Bbv12I	GWGCWC	4 cut(s)	1015, 1546, 2619, 2656
BbvCI	CCTCAGC	1 cut(s)	351
BceAI	ACGGC	3 cut(s)	575, 1775, 2757
BcgI	CGANNNNNNTGC	4 cut(s)	478, 512, 1358, 1392
BciT130I	CCWGG	5 cut(s)	786, 1017, 1049, 2130, 2733
BciVI	GTATCC	1 cut(s)	1598
BclI	TGATCA	1 cut(s)	2316
BcnI	CCSGG	3 cut(s)	1939, 1940, 2719
BcoDI	GTCTC	2 cut(s)	756, 2173
BcuI	ACTAGT	1 cut(s)	1714
BfaI	CTAG	8 cut(s)	549, 759, 846, 986, 1715, 1862, 1920, 2510
BfmI	CTRYAG	4 cut(s)	672, 1458, 1740, 1833
BfoI	RGCGCY	1 cut(s)	624
BfrI	CTTAAG	1 cut(s)	184
BfuAI	ACCTGC	1 cut(s)	1747
BfuI	GTATCC	1 cut(s)	1598
BglII	AGATCT	1 cut(s)	2532
BmcAI	AGTACT	1 cut(s)	545
Bme1390I	CCNGG	8 cut(s)	786, 1017, 1049, 1939, 1940, 2130, 2719, 2733
Bme18I	GGWCC	5 cut(s)	782, 1772, 1935, 1991, 2784
BmeRI	GACNNNNNGTC	1 cut(s)	2560
BmeT110I	CYCGRG	2 cut(s)	1101, 1938
BmgT120I	GGNCC	6 cut(s)	782, 1396, 1772, 1935, 1991, 2784
BmiI	GGNNCC	3 cut(s)	382, 1773, 1937
BmrFI	CCNGG	8 cut(s)	786, 1017, 1049, 1939, 1940, 2130, 2719, 2733
BpiI	GAAGAC	3 cut(s)	971, 1719, 2368
BpmI	CTGGAG	2 cut(s)	1115, 2234
Bpu10I	CCTNAGC	1 cut(s)	351
Bpu14I	TTCGAA	3 cut(s)	240, 449, 2259
BpuEI	CTTGAG	4 cut(s)	351, 620, 1645, 2432
BpuMI	CCSGG	3 cut(s)	1939, 1940, 2719
Bsa29I	ATCGAT	1 cut(s)	2828
BsaAI	YACGTR	1 cut(s)	842
BsaBI	GATNNNNATC	3 cut(s)	360, 2268, 2531
BsaHI	GRCGYC	1 cut(s)	2182
BsaJI	CCNNGG	3 cut(s)	376, 1047, 1938
BsaWI	WCCGGW	6 cut(s)	383, 577, 2227, 2417, 2664, 2765
BsaXI	ACNNNNNCTCC	4 cut(s)	149, 179, 2646, 2676
Bsc4I	CCNNNNNNNGG	6 cut(s)	761, 872, 1250, 1332, 1745, 2648
Bse118I	RCCGGY	2 cut(s)	623, 1070
Bse1I	ACTGG	6 cut(s)	816, 1008, 1346, 1619, 1770, 1817
Bse3DI	GCAATG	4 cut(s)	972, 1224, 1272, 2349
Bse8I	GATNNNNATC	3 cut(s)	360, 2268, 2531
BseAI	TCCGGA	2 cut(s)	2227, 2664
BseBI	CCWGG	5 cut(s)	786, 1017, 1049, 2130, 2733
BseCI	ATCGAT	1 cut(s)	2828
BseDI	CCNNGG	3 cut(s)	376, 1047, 1938
BseGI	GGATG	4 cut(s)	1277, 1582, 1684, 2224
BseJI	GATNNNNATC	3 cut(s)	360, 2268, 2531
BseLI	CCNNNNNNNGG	6 cut(s)	761, 872, 1250, 1332, 1745, 2648
BseMI	GCAATG	4 cut(s)	972, 1224, 1272, 2349
BseMII	CTCAG	5 cut(s)	296, 342, 2057, 2534, 2713
BseNI	ACTGG	6 cut(s)	816, 1008, 1346, 1619, 1770, 1817
BseRI	GAGGAG	3 cut(s)	41, 744, 2115
BseSI	GKGCMC	1 cut(s)	2656
Bsh1285I	CGRYCG	2 cut(s)	1963, 2832
BshFI	GGCC	5 cut(s)	1070, 1398, 1640, 2268, 2348
BshVI	ATCGAT	1 cut(s)	2828
BsiEI	CGRYCG	2 cut(s)	1963, 2832
BsiHKAI	GWGCWC	4 cut(s)	1015, 1546, 2619, 2656
BsiHKCI	CYCGRG	2 cut(s)	1101, 1938
BslFI	GGGAC	4 cut(s)	443, 1030, 1785, 1921
BslI	CCNNNNNNNGG	6 cut(s)	761, 872, 1250, 1332, 1745, 2648
BsmAI	GTCTC	2 cut(s)	756, 2173
BsmBI	CGTCTC	1 cut(s)	2173
BsmFI	GGGAC	4 cut(s)	443, 1030, 1785, 1921
BsmI	GAATGC	2 cut(s)	1851, 2163
BsnI	GGCC	5 cut(s)	1070, 1398, 1640, 2268, 2348
BsoBI	CYCGRG	2 cut(s)	1101, 1938
Bsp119I	TTCGAA	3 cut(s)	240, 449, 2259
Bsp1286I	GDGCHC	4 cut(s)	1015, 1546, 2619, 2656
Bsp13I	TCCGGA	2 cut(s)	2227, 2664
BspACI	CCGC	8 cut(s)	93, 148, 160, 233, 536, 916, 1379, 1904
BspANI	GGCC	5 cut(s)	1070, 1398, 1640, 2268, 2348
BspCNI	CTCAG	5 cut(s)	295, 343, 2058, 2533, 2712
BspDI	ATCGAT	1 cut(s)	2828
BspEI	TCCGGA	2 cut(s)	2227, 2664
BspLI	GGNNCC	3 cut(s)	382, 1773, 1937
BspMAI	CTGCAG	4 cut(s)	676, 1462, 1744, 1837
BspMI	ACCTGC	1 cut(s)	1747
BspT104I	TTCGAA	3 cut(s)	240, 449, 2259
BspTI	CTTAAG	1 cut(s)	184
BsrDI	GCAATG	4 cut(s)	972, 1224, 1272, 2349
BsrFI	RCCGGY	2 cut(s)	623, 1070
BsrI	ACTGG	6 cut(s)	816, 1008, 1346, 1619, 1770, 1817
BssAI	RCCGGY	2 cut(s)	623, 1070
BssECI	CCNNGG	3 cut(s)	376, 1047, 1938
BssNI	GRCGYC	1 cut(s)	2182
BssSI	CACGAG	2 cut(s)	405, 2570
BssT1I	CCWWGG	1 cut(s)	376
Bst2BI	CACGAG	2 cut(s)	405, 2570
Bst2UI	CCWGG	5 cut(s)	786, 1017, 1049, 2130, 2733
Bst6I	CTCTTC	7 cut(s)	605, 709, 1157, 1192, 1716, 1925, 2394
BstACI	GRCGYC	1 cut(s)	2182
BstAFI	CTTAAG	1 cut(s)	184
BstAPI	GCANNNNNTGC	1 cut(s)	1793
BstBAI	YACGTR	1 cut(s)	842
BstBI	TTCGAA	3 cut(s)	240, 449, 2259
BstC8I	GCNNGC	4 cut(s)	625, 1667, 1747, 2111
BstDEI	CTNAG	7 cut(s)	282, 337, 351, 1874, 2066, 2520, 2699
BstENI	CCTNNNNNAGG	1 cut(s)	1743
BstF5I	GGATG	4 cut(s)	1277, 1582, 1684, 2224
BstH2I	RGCGCY	1 cut(s)	624
BstHHI	GCGC	1 cut(s)	623
BstMAI	GTCTC	2 cut(s)	756, 2173
BstMCI	CGRYCG	2 cut(s)	1963, 2832
BstMWI	GCNNNNNNNGC	9 cut(s)	266, 410, 1454, 1793, 1910, 2033, 2631, 2651, 2714
BstNI	CCWGG	5 cut(s)	786, 1017, 1049, 2130, 2733
BstNSI	RCATGY	2 cut(s)	80, 499
BstSCI	CCNGG	8 cut(s)	784, 1015, 1047, 1937, 1938, 2128, 2717, 2731
BstSFI	CTRYAG	4 cut(s)	672, 1458, 1740, 1833
BstSLI	GKGCMC	1 cut(s)	2656
BstV2I	GAAGAC	3 cut(s)	971, 1719, 2368
BstX2I	RGATCY	5 cut(s)	380, 829, 1954, 2532, 2692
BstYI	RGATCY	5 cut(s)	380, 829, 1954, 2532, 2692
Bsu15I	ATCGAT	1 cut(s)	2828
BsuI	GTATCC	1 cut(s)	1598
BsuRI	GGCC	5 cut(s)	1070, 1398, 1640, 2268, 2348
BsuTUI	ATCGAT	1 cut(s)	2828
BtgZI	GCGATG	1 cut(s)	73
BtsCI	GGATG	4 cut(s)	1277, 1582, 1684, 2224
BtsI	GCAGTG	3 cut(s)	1107, 1467, 1830
BtsIMutI	CAGTG	8 cut(s)	1015, 1107, 1274, 1353, 1467, 1830, 2199, 2707
BveI	ACCTGC	1 cut(s)	1747
Cac8I	GCNNGC	4 cut(s)	625, 1667, 1747, 2111
CfoI	GCGC	1 cut(s)	623
Cfr10I	RCCGGY	2 cut(s)	623, 1070
Cfr13I	GGNCC	6 cut(s)	782, 1396, 1772, 1935, 1991, 2784
Cfr9I	CCCGGG	1 cut(s)	1938
ClaI	ATCGAT	1 cut(s)	2828
CseI	GACGC	1 cut(s)	2084
CsiI	ACCWGGT	1 cut(s)	784
Csp6I	GTAC	3 cut(s)	544, 809, 1465
CspCI	CAANNNNNGTGG	2 cut(s)	1270, 1305
CviAII	CATG	8 cut(s)	77, 496, 1042, 1642, 2062, 2077, 2089, 2366
CviQI	GTAC	3 cut(s)	544, 809, 1465
DdeI	CTNAG	7 cut(s)	282, 337, 351, 1874, 2066, 2520, 2699
DraIII	CACNNNGTG	2 cut(s)	1651, 2702
DrdI	GACNNNNNNGTC	1 cut(s)	2492
DriI	GACNNNNNGTC	1 cut(s)	2560
DseDI	GACNNNNNNGTC	1 cut(s)	2492
EaeI	YGGCCR	3 cut(s)	1068, 2266, 2346
Eam1104I	CTCTTC	7 cut(s)	605, 709, 1157, 1192, 1716, 1925, 2394
Eam1105I	GACNNNNNGTC	1 cut(s)	2560
EarI	CTCTTC	7 cut(s)	605, 709, 1157, 1192, 1716, 1925, 2394
Ecl136II	GAGCTC	2 cut(s)	1544, 2617
Eco130I	CCWWGG	1 cut(s)	376
Eco24I	GRGCYC	2 cut(s)	1546, 2619
Eco32I	GATATC	1 cut(s)	2233
Eco47I	GGWCC	5 cut(s)	782, 1772, 1935, 1991, 2784
Eco53kI	GAGCTC	2 cut(s)	1544, 2617
Eco57I	CTGAAG	2 cut(s)	999, 1250
Eco72I	CACGTG	1 cut(s)	842
Eco88I	CYCGRG	2 cut(s)	1101, 1938
EcoICRI	GAGCTC	2 cut(s)	1544, 2617
EcoNI	CCTNNNNNAGG	1 cut(s)	1743
EcoO109I	RGGNCCY	2 cut(s)	1772, 1935
EcoRI	GAATTC	1 cut(s)	1812
EcoRII	CCWGG	5 cut(s)	784, 1015, 1047, 2128, 2731
EcoRV	GATATC	1 cut(s)	2233
EcoT14I	CCWWGG	1 cut(s)	376
EcoT38I	GRGCYC	2 cut(s)	1546, 2619
ErhI	CCWWGG	1 cut(s)	376
Esp3I	CGTCTC	1 cut(s)	2173
FaeI	CATG	8 cut(s)	80, 499, 1045, 1645, 2065, 2080, 2092, 2369
FalI	AAGNNNNNCTT	6 cut(s)	360, 392, 1857, 1889, 2697, 2729
FaqI	GGGAC	4 cut(s)	443, 1030, 1785, 1921
FatI	CATG	8 cut(s)	76, 495, 1041, 1641, 2061, 2076, 2088, 2365
FauNDI	CATATG	1 cut(s)	2621
FbaI	TGATCA	1 cut(s)	2316
FokI	GGATG	4 cut(s)	1264, 1589, 1691, 2211
FriOI	GRGCYC	2 cut(s)	1546, 2619
FspBI	CTAG	8 cut(s)	549, 759, 846, 986, 1715, 1862, 1920, 2510
GlaI	GCGC	1 cut(s)	622
GsuI	CTGGAG	2 cut(s)	1115, 2234
HaeII	RGCGCY	1 cut(s)	624
HaeIII	GGCC	5 cut(s)	1070, 1398, 1640, 2268, 2348
HgaI	GACGC	1 cut(s)	2084
HhaI	GCGC	1 cut(s)	623
Hin1I	GRCGYC	1 cut(s)	2182
Hin1II	CATG	8 cut(s)	80, 499, 1045, 1645, 2065, 2080, 2092, 2369
Hin6I	GCGC	1 cut(s)	621
HinP1I	GCGC	1 cut(s)	621
HindIII	AAGCTT	3 cut(s)	462, 1554, 2427
Hpy166II	GTNNAC	7 cut(s)	249, 319, 1262, 1465, 1712, 1991, 2654
Hpy8I	GTNNAC	7 cut(s)	249, 319, 1262, 1465, 1712, 1991, 2654
Hpy99I	CGWCG	3 cut(s)	181, 493, 1754
HpyAV	CCTTC	8 cut(s)	280, 974, 1248, 1309, 1409, 2144, 2283, 2509
HpyCH4IV	ACGT	2 cut(s)	841, 2182
HpyF10VI	GCNNNNNNNGC	9 cut(s)	266, 410, 1454, 1793, 1910, 2033, 2631, 2651, 2714
HpyF3I	CTNAG	7 cut(s)	282, 337, 351, 1874, 2066, 2520, 2699
HpySE526I	ACGT	2 cut(s)	841, 2182
Hsp92I	GRCGYC	1 cut(s)	2182
Hsp92II	CATG	8 cut(s)	80, 499, 1045, 1645, 2065, 2080, 2092, 2369
HspAI	GCGC	1 cut(s)	621
Kpn2I	TCCGGA	2 cut(s)	2227, 2664
KroI	GCCGGC	1 cut(s)	623
KroNI	GCCGGC	1 cut(s)	625
Ksp22I	TGATCA	1 cut(s)	2316
LmnI	GCTCC	8 cut(s)	580, 647, 741, 1018, 2014, 2092, 2614, 2721
MabI	ACCWGGT	1 cut(s)	784
MaeI	CTAG	8 cut(s)	549, 759, 846, 986, 1715, 1862, 1920, 2510
MaeII	ACGT	2 cut(s)	841, 2182
MaeIII	GTNAC	4 cut(s)	79, 1105, 2674, 2812
MfeI	CAATTG	2 cut(s)	1426, 1968
MflI	RGATCY	5 cut(s)	380, 829, 1954, 2532, 2692
MhlI	GDGCHC	4 cut(s)	1015, 1546, 2619, 2656
MlsI	TGGCCA	2 cut(s)	2268, 2348
MluNI	TGGCCA	2 cut(s)	2268, 2348
MlyI	GAGTC	9 cut(s)	42, 531, 591, 758, 1113, 1312, 1712, 1733, 1867
MmeI	TCCRAC	6 cut(s)	200, 574, 1174, 1984, 2317, 2527
Mox20I	TGGCCA	2 cut(s)	2268, 2348
MroI	TCCGGA	2 cut(s)	2227, 2664
MroNI	GCCGGC	1 cut(s)	623
MroXI	GAANNNNTTC	4 cut(s)	215, 1653, 2456, 2709
MscI	TGGCCA	2 cut(s)	2268, 2348
MseI	TTAA	6 cut(s)	185, 690, 1128, 1356, 1949, 2304
Msp20I	TGGCCA	2 cut(s)	2268, 2348
MspA1I	CMGCKG	3 cut(s)	233, 671, 2254
MspCI	CTTAAG	1 cut(s)	184
MspR9I	CCNGG	8 cut(s)	786, 1017, 1049, 1939, 1940, 2130, 2719, 2733
MunI	CAATTG	2 cut(s)	1426, 1968
Mva1269I	GAATGC	2 cut(s)	1851, 2163
MvaI	CCWGG	5 cut(s)	786, 1017, 1049, 2130, 2733
MwoI	GCNNNNNNNGC	9 cut(s)	266, 410, 1454, 1793, 1910, 2033, 2631, 2651, 2714
NaeI	GCCGGC	1 cut(s)	625
NciI	CCSGG	3 cut(s)	1939, 1940, 2719
NdeI	CATATG	1 cut(s)	2621
NgoMIV	GCCGGC	1 cut(s)	623
NlaIII	CATG	8 cut(s)	80, 499, 1045, 1645, 2065, 2080, 2092, 2369
NlaIV	GGNNCC	3 cut(s)	382, 1773, 1937
NmuCI	GTSAC	3 cut(s)	79, 1105, 2674
NspI	RCATGY	2 cut(s)	80, 499
NspV	TTCGAA	3 cut(s)	240, 449, 2259
PaeR7I	CTCGAG	1 cut(s)	1101
PaqCI	CACCTGC	1 cut(s)	1747
PciI	ACATGT	1 cut(s)	76
PcsI	WCGNNNNNNNCGW	1 cut(s)	1365
PctI	GAATGC	2 cut(s)	1851, 2163
PdiI	GCCGGC	1 cut(s)	625
PdmI	GAANNNNTTC	4 cut(s)	215, 1653, 2456, 2709
PfeI	GAWTC	5 cut(s)	132, 446, 2057, 2279, 2795
PflMI	CCANNNNNTGG	1 cut(s)	1250
PfoI	TCCNGGA	1 cut(s)	1015
Ple19I	CGATCG	1 cut(s)	2832
PleI	GAGTC	9 cut(s)	42, 530, 591, 757, 1112, 1311, 1711, 1732, 1866
PmaCI	CACGTG	1 cut(s)	842
PmlI	CACGTG	1 cut(s)	842
PpsI	GAGTC	9 cut(s)	42, 530, 591, 757, 1112, 1311, 1711, 1732, 1866
Ppu21I	YACGTR	1 cut(s)	842
PpuMI	RGGWCCY	2 cut(s)	1772, 1935
PscI	ACATGT	1 cut(s)	76
Psp124BI	GAGCTC	2 cut(s)	1546, 2619
Psp5II	RGGWCCY	2 cut(s)	1772, 1935
Psp6I	CCWGG	5 cut(s)	784, 1015, 1047, 2128, 2731
PspCI	CACGTG	1 cut(s)	842
PspGI	CCWGG	5 cut(s)	784, 1015, 1047, 2128, 2731
PspN4I	GGNNCC	3 cut(s)	382, 1773, 1937
PspPI	GGNCC	6 cut(s)	782, 1396, 1772, 1935, 1991, 2784
PspPPI	RGGWCCY	2 cut(s)	1772, 1935
PspXI	VCTCGAGB	1 cut(s)	1101
PstI	CTGCAG	4 cut(s)	676, 1462, 1744, 1837
PsuI	RGATCY	5 cut(s)	380, 829, 1954, 2532, 2692
PvuI	CGATCG	1 cut(s)	2832
PvuII	CAGCTG	2 cut(s)	671, 2254
RsaI	GTAC	3 cut(s)	545, 810, 1466
RsaNI	GTAC	3 cut(s)	544, 809, 1465
SacI	GAGCTC	2 cut(s)	1546, 2619
SaqAI	TTAA	6 cut(s)	185, 690, 1128, 1356, 1949, 2304
Sau96I	GGNCC	6 cut(s)	782, 1396, 1772, 1935, 1991, 2784
ScaI	AGTACT	1 cut(s)	545
SchI	GAGTC	9 cut(s)	42, 531, 591, 758, 1113, 1312, 1712, 1733, 1867
ScrFI	CCNGG	8 cut(s)	786, 1017, 1049, 1939, 1940, 2130, 2719, 2733
SduI	GDGCHC	4 cut(s)	1015, 1546, 2619, 2656
SexAI	ACCWGGT	1 cut(s)	784
SfcI	CTRYAG	4 cut(s)	672, 1458, 1740, 1833
Sfr274I	CTCGAG	1 cut(s)	1101
SfuI	TTCGAA	3 cut(s)	240, 449, 2259
SinI	GGWCC	5 cut(s)	782, 1772, 1935, 1991, 2784
SlaI	CTCGAG	1 cut(s)	1101
SmaI	CCCGGG	1 cut(s)	1940
SmlI	CTYRAG	6 cut(s)	184, 366, 635, 1101, 1660, 2447
SmoI	CTYRAG	6 cut(s)	184, 366, 635, 1101, 1660, 2447
SpeI	ACTAGT	1 cut(s)	1714
SsiI	CCGC	8 cut(s)	93, 148, 160, 233, 536, 916, 1379, 1904
SspI	AATATT	1 cut(s)	2242
SspMI	CTAG	8 cut(s)	549, 759, 846, 986, 1715, 1862, 1920, 2510
SstI	GAGCTC	2 cut(s)	1546, 2619
StyD4I	CCNGG	8 cut(s)	784, 1015, 1047, 1937, 1938, 2128, 2717, 2731
StyI	CCWWGG	1 cut(s)	376
TaiI	ACGT	2 cut(s)	844, 2185
TatI	WGTACW	2 cut(s)	543, 808
TauI	GCSGC	2 cut(s)	95, 918
TfiI	GAWTC	5 cut(s)	132, 446, 2057, 2279, 2795
Tru1I	TTAA	6 cut(s)	185, 690, 1128, 1356, 1949, 2304
Tru9I	TTAA	6 cut(s)	185, 690, 1128, 1356, 1949, 2304
TscAI	CASTG	8 cut(s)	1015, 1114, 1274, 1353, 1467, 1837, 2199, 2707
TseFI	GTSAC	3 cut(s)	79, 1105, 2674
Tsp45I	GTSAC	3 cut(s)	79, 1105, 2674
TspGWI	ACGGA	4 cut(s)	223, 506, 2027, 2450
TspMI	CCCGGG	1 cut(s)	1938
TspRI	CASTG	8 cut(s)	1015, 1114, 1274, 1353, 1467, 1837, 2199, 2707
Van91I	CCANNNNNTGG	1 cut(s)	1250
Vha464I	CTTAAG	1 cut(s)	184
VneI	GTGCAC	1 cut(s)	2652
VpaK11BI	GGWCC	5 cut(s)	782, 1772, 1935, 1991, 2784
XagI	CCTNNNNNAGG	1 cut(s)	1743
XapI	RAATTY	4 cut(s)	215, 658, 1295, 1812
XbaI	TCTAGA	2 cut(s)	1861, 1919
XceI	RCATGY	2 cut(s)	80, 499
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1648, 2068
XhoI	CTCGAG	1 cut(s)	1101
XmaI	CCCGGG	1 cut(s)	1938
XmnI	GAANNNNTTC	4 cut(s)	215, 1653, 2456, 2709
XspI	CTAG	8 cut(s)	549, 759, 846, 986, 1715, 1862, 1920, 2510
ZraI	GACGTC	1 cut(s)	2183
ZrmI	AGTACT	1 cut(s)	545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.