Belongs to the ClpA ClpB family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51070 |
| fragaria_vesca | FvH4_5g10020 |
| malus_domestica | MD06G1128400.v1.1 |
| prunus_persica | Prupe.5G138200_v2.0.a1 |
| pyrus_communis | pycom06g11860 |
| rosa_chinensis | RchiOBHm_Chr7g0188241 |
| rosa_laevigata | RLG00000004715 |
| rosa_multiflora | Rmu_co8357845.1_g000001 Rmu_co8388145.1_g000001 Rmu_sc0008750.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00266580 |
| rosa_rugosa | Rorug06G0489400 |
| rosa_samantha | Rh7AG093700 Rh7BG095100 Rh7CG095500 Rh7DG095700 |
| rosa_wichuraiana | Rw7G008070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2390 |
| AbsI | CCTCGAGG | 1 cut(s) | 775 |
| AccB1I | GGYRCC | 3 cut(s) | 497, 507, 2708 |
| AccBSI | CCGCTC | 1 cut(s) | 301 |
| AccI | GTMKAC | 2 cut(s) | 1474, 1663 |
| AccII | CGCG | 1 cut(s) | 1177 |
| AccIII | TCCGGA | 1 cut(s) | 276 |
| AcoI | YGGCCR | 3 cut(s) | 949, 1533, 2326 |
| AcsI | RAATTY | 5 cut(s) | 70, 439, 1656, 1698, 2313 |
| AcuI | CTGAAG | 4 cut(s) | 981, 1865, 2030, 2636 |
| AcyI | GRCGYC | 3 cut(s) | 498, 2387, 2709 |
| AfaI | GTAC | 2 cut(s) | 1242, 2883 |
| AfeI | AGCGCT | 1 cut(s) | 2766 |
| AflIII | ACRYGT | 1 cut(s) | 1111 |
| AgeI | ACCGGT | 1 cut(s) | 2697 |
| AjnI | CCWGG | 4 cut(s) | 477, 1101, 1443, 2188 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1017, 1049 |
| Alw21I | GWGCWC | 5 cut(s) | 358, 621, 655, 678, 1621 |
| Alw26I | GTCTC | 2 cut(s) | 948, 2637 |
| Ama87I | CYCGRG | 7 cut(s) | 460, 483, 620, 775, 1980, 1998, 2585 |
| Aor13HI | TCCGGA | 1 cut(s) | 276 |
| Aor51HI | AGCGCT | 1 cut(s) | 2766 |
| AoxI | GGCC | 7 cut(s) | 247, 480, 949, 1491, 1533, 2326, 2671 |
| ApoI | RAATTY | 5 cut(s) | 70, 439, 1656, 1698, 2313 |
| AseI | ATTAAT | 3 cut(s) | 1139, 1431, 2174 |
| AsiGI | ACCGGT | 1 cut(s) | 2697 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2766 |
| AspLEI | GCGC | 6 cut(s) | 500, 670, 1177, 2157, 2711, 2767 |
| AsuC2I | CCSGG | 7 cut(s) | 259, 484, 485, 1999, 2000, 2059, 2790 |
| AsuHPI | GGTGA | 7 cut(s) | 172, 183, 688, 1034, 1668, 2175, 2804 |
| AvaI | CYCGRG | 7 cut(s) | 460, 483, 620, 775, 1980, 1998, 2585 |
| AvaII | GGWCC | 6 cut(s) | 724, 889, 1729, 1832, 2051, 2400 |
| BaeGI | GKGCMC | 1 cut(s) | 2219 |
| BalI | TGGCCA | 1 cut(s) | 2328 |
| BamHI | GGATCC | 1 cut(s) | 2014 |
| BanI | GGYRCC | 3 cut(s) | 497, 507, 2708 |
| BanII | GRGCYC | 4 cut(s) | 358, 655, 1621, 2578 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2109, 2141 |
| BbsI | GAAGAC | 4 cut(s) | 3, 148, 286, 2245 |
| Bbv12I | GWGCWC | 5 cut(s) | 358, 621, 655, 678, 1621 |
| BceAI | ACGGC | 3 cut(s) | 311, 463, 1520 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1682, 1716, 2798, 2832 |
| BciT130I | CCWGG | 4 cut(s) | 479, 1103, 1445, 2190 |
| BciVI | GTATCC | 1 cut(s) | 1455 |
| BcnI | CCSGG | 7 cut(s) | 259, 484, 485, 1999, 2000, 2059, 2790 |
| BcoDI | GTCTC | 2 cut(s) | 948, 2637 |
| BfaI | CTAG | 5 cut(s) | 648, 921, 1290, 1733, 1764 |
| BfmI | CTRYAG | 5 cut(s) | 471, 540, 1362, 1504, 1821 |
| BfoI | RGCGCY | 4 cut(s) | 501, 2158, 2712, 2768 |
| BfuI | GTATCC | 1 cut(s) | 1455 |
| Bme18I | GGWCC | 6 cut(s) | 724, 889, 1729, 1832, 2051, 2400 |
| BmeT110I | CYCGRG | 7 cut(s) | 460, 483, 620, 775, 1980, 1998, 2585 |
| BmiI | GGNNCC | 7 cut(s) | 250, 499, 509, 1833, 2016, 2401, 2710 |
| BmrI | ACTGGG | 1 cut(s) | 746 |
| BmsI | GCATC | 9 cut(s) | 474, 1441, 1618, 1707, 1747, 2105, 2329, 2571, 2806 |
| BmuI | ACTGGG | 1 cut(s) | 746 |
| BpiI | GAAGAC | 4 cut(s) | 3, 148, 286, 2245 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 758, 790 |
| BpmI | CTGGAG | 1 cut(s) | 2669 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1934, 2343, 2720 |
| BpuEI | CTTGAG | 1 cut(s) | 2489 |
| BpuMI | CCSGG | 7 cut(s) | 259, 484, 485, 1999, 2000, 2059, 2790 |
| BsaAI | YACGTR | 1 cut(s) | 1478 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1558, 1569 |
| BsaHI | GRCGYC | 3 cut(s) | 498, 2387, 2709 |
| BsaWI | WCCGGW | 4 cut(s) | 276, 2697, 2822, 2862 |
| Bse118I | RCCGGY | 2 cut(s) | 245, 2697 |
| Bse1I | ACTGG | 4 cut(s) | 741, 754, 1065, 2652 |
| Bse3DI | GCAATG | 4 cut(s) | 663, 678, 1299, 2409 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1558, 1569 |
| BseAI | TCCGGA | 1 cut(s) | 276 |
| BseBI | CCWGG | 4 cut(s) | 479, 1103, 1445, 2190 |
| BseJI | GATNNNNATC | 2 cut(s) | 1558, 1569 |
| BseMI | GCAATG | 4 cut(s) | 663, 678, 1299, 2409 |
| BseMII | CTCAG | 2 cut(s) | 2357, 2591 |
| BseNI | ACTGG | 4 cut(s) | 741, 754, 1065, 2652 |
| BseRI | GAGGAG | 5 cut(s) | 13, 16, 425, 428, 1780 |
| BseSI | GKGCMC | 1 cut(s) | 2219 |
| BseX3I | CGGCCG | 1 cut(s) | 1533 |
| BseYI | CCCAGC | 2 cut(s) | 381, 2210 |
| BsgI | GTGCAG | 1 cut(s) | 79 |
| Bsh1236I | CGCG | 1 cut(s) | 1177 |
| Bsh1285I | CGRYCG | 3 cut(s) | 1536, 2058, 2698 |
| BshFI | GGCC | 7 cut(s) | 249, 482, 951, 1493, 1535, 2328, 2673 |
| BshNI | GGYRCC | 3 cut(s) | 497, 507, 2708 |
| BshTI | ACCGGT | 1 cut(s) | 2697 |
| BsiEI | CGRYCG | 3 cut(s) | 1536, 2058, 2698 |
| BsiHKAI | GWGCWC | 5 cut(s) | 358, 621, 655, 678, 1621 |
| BsiHKCI | CYCGRG | 7 cut(s) | 460, 483, 620, 775, 1980, 1998, 2585 |
| BslFI | GGGAC | 7 cut(s) | 575, 942, 1073, 1845, 1859, 2361, 2658 |
| BsmAI | GTCTC | 2 cut(s) | 948, 2637 |
| BsmFI | GGGAC | 7 cut(s) | 575, 942, 1073, 1845, 1859, 2361, 2658 |
| BsmI | GAATGC | 2 cut(s) | 1911, 2374 |
| BsnI | GGCC | 7 cut(s) | 249, 482, 951, 1493, 1535, 2328, 2673 |
| BsoBI | CYCGRG | 7 cut(s) | 460, 483, 620, 775, 1980, 1998, 2585 |
| Bsp1286I | GDGCHC | 7 cut(s) | 358, 621, 655, 678, 1621, 2219, 2578 |
| Bsp13I | TCCGGA | 1 cut(s) | 276 |
| Bsp1407I | TGTACA | 1 cut(s) | 2881 |
| Bsp19I | CCATGG | 1 cut(s) | 2028 |
| BspANI | GGCC | 7 cut(s) | 249, 482, 951, 1493, 1535, 2328, 2673 |
| BspCNI | CTCAG | 2 cut(s) | 2356, 2590 |
| BspEI | TCCGGA | 1 cut(s) | 276 |
| BspFNI | CGCG | 1 cut(s) | 1177 |
| BspLI | GGNNCC | 7 cut(s) | 250, 499, 509, 1833, 2016, 2401, 2710 |
| BspMAI | CTGCAG | 3 cut(s) | 544, 1366, 1508 |
| BspT107I | GGYRCC | 3 cut(s) | 497, 507, 2708 |
| BsrBI | CCGCTC | 1 cut(s) | 301 |
| BsrDI | GCAATG | 4 cut(s) | 663, 678, 1299, 2409 |
| BsrFI | RCCGGY | 2 cut(s) | 245, 2697 |
| BsrGI | TGTACA | 1 cut(s) | 2881 |
| BsrI | ACTGG | 4 cut(s) | 741, 754, 1065, 2652 |
| BssAI | RCCGGY | 2 cut(s) | 245, 2697 |
| BssNAI | GTATAC | 1 cut(s) | 1664 |
| BssNI | GRCGYC | 3 cut(s) | 498, 2387, 2709 |
| BssT1I | CCWWGG | 4 cut(s) | 1122, 1324, 2028, 2415 |
| Bst1107I | GTATAC | 1 cut(s) | 1664 |
| Bst2UI | CCWGG | 4 cut(s) | 479, 1103, 1445, 2190 |
| Bst4CI | ACNGT | 8 cut(s) | 1267, 1344, 1708, 1825, 2130, 2254, 2491, 2800 |
| Bst6I | CTCTTC | 4 cut(s) | 1798, 1884, 1953, 2615 |
| BstACI | GRCGYC | 3 cut(s) | 498, 2387, 2709 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1853 |
| BstAUI | TGTACA | 1 cut(s) | 2881 |
| BstBAI | YACGTR | 1 cut(s) | 1478 |
| BstC8I | GCNNGC | 6 cut(s) | 232, 247, 315, 2448, 2713, 2717 |
| BstDEI | CTNAG | 4 cut(s) | 1934, 2343, 2577, 2720 |
| BstDSI | CCRYGG | 2 cut(s) | 445, 2028 |
| BstEII | GGTNACC | 1 cut(s) | 2181 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1388, 1636 |
| BstFNI | CGCG | 1 cut(s) | 1177 |
| BstH2I | RGCGCY | 4 cut(s) | 501, 2158, 2712, 2768 |
| BstHHI | GCGC | 6 cut(s) | 500, 670, 1177, 2157, 2711, 2767 |
| BstMAI | GTCTC | 2 cut(s) | 948, 2637 |
| BstMCI | CGRYCG | 3 cut(s) | 1536, 2058, 2698 |
| BstNI | CCWGG | 4 cut(s) | 479, 1103, 1445, 2190 |
| BstPI | GGTNACC | 1 cut(s) | 2181 |
| BstSFI | CTRYAG | 5 cut(s) | 471, 540, 1362, 1504, 1821 |
| BstSLI | GKGCMC | 1 cut(s) | 2219 |
| BstUI | CGCG | 1 cut(s) | 1177 |
| BstV2I | GAAGAC | 4 cut(s) | 3, 148, 286, 2245 |
| BstX2I | RGATCY | 4 cut(s) | 904, 1994, 2014, 2749 |
| BstYI | RGATCY | 4 cut(s) | 904, 1994, 2014, 2749 |
| BstZ17I | GTATAC | 1 cut(s) | 1664 |
| BstZI | CGGCCG | 1 cut(s) | 1533 |
| BsuI | GTATCC | 1 cut(s) | 1455 |
| BsuRI | GGCC | 7 cut(s) | 249, 482, 951, 1493, 1535, 2328, 2673 |
| BtgI | CCRYGG | 2 cut(s) | 445, 2028 |
| BtgZI | GCGATG | 2 cut(s) | 1730, 1770 |
| BtsI | GCAGTG | 3 cut(s) | 1890, 2036, 2884 |
| BtsIMutI | CAGTG | 8 cut(s) | 957, 1349, 1830, 1890, 2036, 2259, 2796, 2884 |
| Cac8I | GCNNGC | 6 cut(s) | 232, 247, 315, 2448, 2713, 2717 |
| CfoI | GCGC | 6 cut(s) | 500, 670, 1177, 2157, 2711, 2767 |
| Cfr10I | RCCGGY | 2 cut(s) | 245, 2697 |
| Cfr9I | CCCGGG | 2 cut(s) | 483, 1998 |
| Csp6I | GTAC | 2 cut(s) | 1241, 2882 |
| CspAI | ACCGGT | 1 cut(s) | 2697 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2392, 2427 |
| CviAII | CATG | 6 cut(s) | 370, 1721, 2029, 2122, 2137, 2812 |
| CviQI | GTAC | 2 cut(s) | 1241, 2882 |
| DdeI | CTNAG | 4 cut(s) | 1934, 2343, 2577, 2720 |
| DinI | GGCGCC | 2 cut(s) | 499, 2710 |
| EaeI | YGGCCR | 3 cut(s) | 949, 1533, 2326 |
| EagI | CGGCCG | 1 cut(s) | 1533 |
| Eam1104I | CTCTTC | 4 cut(s) | 1798, 1884, 1953, 2615 |
| EarI | CTCTTC | 4 cut(s) | 1798, 1884, 1953, 2615 |
| EciI | GGCGGA | 3 cut(s) | 70, 568, 1097 |
| Ecl136II | GAGCTC | 3 cut(s) | 356, 653, 1619 |
| EclXI | CGGCCG | 1 cut(s) | 1533 |
| Eco130I | CCWWGG | 4 cut(s) | 1122, 1324, 2028, 2415 |
| Eco24I | GRGCYC | 4 cut(s) | 358, 655, 1621, 2578 |
| Eco32I | GATATC | 3 cut(s) | 1571, 1777, 2293 |
| Eco47I | GGWCC | 6 cut(s) | 724, 889, 1729, 1832, 2051, 2400 |
| Eco47III | AGCGCT | 1 cut(s) | 2766 |
| Eco52I | CGGCCG | 1 cut(s) | 1533 |
| Eco53kI | GAGCTC | 3 cut(s) | 356, 653, 1619 |
| Eco57I | CTGAAG | 4 cut(s) | 981, 1865, 2030, 2636 |
| Eco88I | CYCGRG | 7 cut(s) | 460, 483, 620, 775, 1980, 1998, 2585 |
| Eco91I | GGTNACC | 1 cut(s) | 2181 |
| EcoICRI | GAGCTC | 3 cut(s) | 356, 653, 1619 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1388, 1636 |
| EcoO109I | RGGNCCY | 2 cut(s) | 724, 2671 |
| EcoO65I | GGTNACC | 1 cut(s) | 2181 |
| EcoRI | GAATTC | 1 cut(s) | 439 |
| EcoRII | CCWGG | 4 cut(s) | 477, 1101, 1443, 2188 |
| EcoRV | GATATC | 3 cut(s) | 1571, 1777, 2293 |
| EcoT14I | CCWWGG | 4 cut(s) | 1122, 1324, 2028, 2415 |
| EcoT22I | ATGCAT | 1 cut(s) | 1722 |
| EcoT38I | GRGCYC | 4 cut(s) | 358, 655, 1621, 2578 |
| EgeI | GGCGCC | 2 cut(s) | 499, 2710 |
| EheI | GGCGCC | 2 cut(s) | 499, 2710 |
| ErhI | CCWWGG | 4 cut(s) | 1122, 1324, 2028, 2415 |
| FaeI | CATG | 6 cut(s) | 373, 1724, 2032, 2125, 2140, 2815 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 514, 546, 777, 809, 2230, 2262, 2754, 2786 |
| FaqI | GGGAC | 7 cut(s) | 575, 942, 1073, 1845, 1859, 2361, 2658 |
| FatI | CATG | 6 cut(s) | 369, 1720, 2028, 2121, 2136, 2811 |
| FauI | CCCGC | 5 cut(s) | 250, 606, 1600, 2720, 2724 |
| FauNDI | CATATG | 1 cut(s) | 2470 |
| FblI | GTMKAC | 2 cut(s) | 1474, 1663 |
| FriOI | GRGCYC | 4 cut(s) | 358, 655, 1621, 2578 |
| FspBI | CTAG | 5 cut(s) | 648, 921, 1290, 1733, 1764 |
| GlaI | GCGC | 6 cut(s) | 499, 669, 1176, 2156, 2710, 2766 |
| GsaI | CCCAGC | 2 cut(s) | 385, 2214 |
| GsuI | CTGGAG | 1 cut(s) | 2669 |
| HaeII | RGCGCY | 4 cut(s) | 501, 2158, 2712, 2768 |
| HaeIII | GGCC | 7 cut(s) | 249, 482, 951, 1493, 1535, 2328, 2673 |
| HhaI | GCGC | 6 cut(s) | 500, 670, 1177, 2157, 2711, 2767 |
| Hin1I | GRCGYC | 3 cut(s) | 498, 2387, 2709 |
| Hin1II | CATG | 6 cut(s) | 373, 1724, 2032, 2125, 2140, 2815 |
| Hin6I | GCGC | 6 cut(s) | 498, 668, 1175, 2155, 2709, 2765 |
| HinP1I | GCGC | 6 cut(s) | 498, 668, 1175, 2155, 2709, 2765 |
| HindIII | AAGCTT | 2 cut(s) | 1931, 2085 |
| HinfI | GANTC | 7 cut(s) | 37, 58, 930, 1256, 1872, 2533, 2660 |
| HphI | GGTGA | 7 cut(s) | 172, 183, 688, 1034, 1668, 2175, 2804 |
| Hpy166II | GTNNAC | 9 cut(s) | 306, 378, 696, 751, 1475, 1664, 2403, 2596, 2882 |
| Hpy8I | GTNNAC | 9 cut(s) | 306, 378, 696, 751, 1475, 1664, 2403, 2596, 2882 |
| Hpy99I | CGWCG | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 8 cut(s) | 1267, 1344, 1708, 1825, 2130, 2254, 2491, 2800 |
| HpyCH4IV | ACGT | 4 cut(s) | 1111, 1477, 2387, 2735 |
| HpyF3I | CTNAG | 4 cut(s) | 1934, 2343, 2577, 2720 |
| HpySE526I | ACGT | 4 cut(s) | 1111, 1477, 2387, 2735 |
| Hsp92I | GRCGYC | 3 cut(s) | 498, 2387, 2709 |
| Hsp92II | CATG | 6 cut(s) | 373, 1724, 2032, 2125, 2140, 2815 |
| HspAI | GCGC | 6 cut(s) | 498, 668, 1175, 2155, 2709, 2765 |
| KasI | GGCGCC | 2 cut(s) | 497, 2708 |
| Kpn2I | TCCGGA | 1 cut(s) | 276 |
| KroI | GCCGGC | 1 cut(s) | 245 |
| KroNI | GCCGGC | 1 cut(s) | 247 |
| LmnI | GCTCC | 7 cut(s) | 279, 310, 415, 673, 2152, 2207, 2435 |
| LweI | GCATC | 9 cut(s) | 474, 1441, 1618, 1707, 1747, 2105, 2329, 2571, 2806 |
| MaeI | CTAG | 5 cut(s) | 648, 921, 1290, 1733, 1764 |
| MaeII | ACGT | 4 cut(s) | 1111, 1477, 2387, 2735 |
| MaeIII | GTNAC | 6 cut(s) | 1196, 1674, 2181, 2461, 2780, 2792 |
| MbiI | CCGCTC | 1 cut(s) | 301 |
| MfeI | CAATTG | 1 cut(s) | 852 |
| MflI | RGATCY | 4 cut(s) | 904, 1994, 2014, 2749 |
| MhlI | GDGCHC | 7 cut(s) | 358, 621, 655, 678, 1621, 2219, 2578 |
| MlsI | TGGCCA | 1 cut(s) | 2328 |
| MluNI | TGGCCA | 1 cut(s) | 2328 |
| Mly113I | GGCGCC | 2 cut(s) | 498, 2709 |
| MlyI | GAGTC | 4 cut(s) | 52, 924, 1265, 1881 |
| MmeI | TCCRAC | 5 cut(s) | 612, 1015, 1249, 1984, 2078 |
| Mox20I | TGGCCA | 1 cut(s) | 2328 |
| Mph1103I | ATGCAT | 1 cut(s) | 1722 |
| MroI | TCCGGA | 1 cut(s) | 276 |
| MroNI | GCCGGC | 1 cut(s) | 245 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2766 |
| MscI | TGGCCA | 1 cut(s) | 2328 |
| MslI | CAYNNNNRTG | 1 cut(s) | 49 |
| Msp20I | TGGCCA | 1 cut(s) | 2328 |
| MspA1I | CMGCKG | 2 cut(s) | 290, 701 |
| MunI | CAATTG | 1 cut(s) | 852 |
| Mva1269I | GAATGC | 2 cut(s) | 1911, 2374 |
| MvaI | CCWGG | 4 cut(s) | 479, 1103, 1445, 2190 |
| MvnI | CGCG | 1 cut(s) | 1177 |
| NaeI | GCCGGC | 1 cut(s) | 247 |
| NarI | GGCGCC | 2 cut(s) | 498, 2709 |
| NciI | CCSGG | 7 cut(s) | 259, 484, 485, 1999, 2000, 2059, 2790 |
| NcoI | CCATGG | 1 cut(s) | 2028 |
| NdeI | CATATG | 1 cut(s) | 2470 |
| NgoMIV | GCCGGC | 1 cut(s) | 245 |
| NlaIII | CATG | 6 cut(s) | 373, 1724, 2032, 2125, 2140, 2815 |
| NlaIV | GGNNCC | 7 cut(s) | 250, 499, 509, 1833, 2016, 2401, 2710 |
| NmeAIII | GCCGAG | 5 cut(s) | 433, 435, 587, 790, 977 |
| NmuCI | GTSAC | 4 cut(s) | 1196, 1674, 2181, 2792 |
| NsiI | ATGCAT | 1 cut(s) | 1722 |
| PaeR7I | CTCGAG | 4 cut(s) | 620, 775, 1980, 2585 |
| PctI | GAATGC | 2 cut(s) | 1911, 2374 |
| PdiI | GCCGGC | 1 cut(s) | 247 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2766 |
| PfeI | GAWTC | 3 cut(s) | 37, 2533, 2660 |
| PflFI | GACNNNGTC | 1 cut(s) | 2798 |
| PfoI | TCCNGGA | 1 cut(s) | 1101 |
| PinAI | ACCGGT | 1 cut(s) | 2697 |
| PleI | GAGTC | 4 cut(s) | 52, 924, 1264, 1880 |
| PluTI | GGCGCC | 2 cut(s) | 501, 2712 |
| PpsI | GAGTC | 4 cut(s) | 52, 924, 1264, 1880 |
| Ppu21I | YACGTR | 1 cut(s) | 1478 |
| PpuMI | RGGWCCY | 1 cut(s) | 724 |
| PshBI | ATTAAT | 3 cut(s) | 1139, 1431, 2174 |
| Psp124BI | GAGCTC | 3 cut(s) | 358, 655, 1621 |
| Psp5II | RGGWCCY | 1 cut(s) | 724 |
| Psp6I | CCWGG | 4 cut(s) | 477, 1101, 1443, 2188 |
| PspEI | GGTNACC | 1 cut(s) | 2181 |
| PspFI | CCCAGC | 2 cut(s) | 381, 2210 |
| PspGI | CCWGG | 4 cut(s) | 477, 1101, 1443, 2188 |
| PspN4I | GGNNCC | 7 cut(s) | 250, 499, 509, 1833, 2016, 2401, 2710 |
| PspPPI | RGGWCCY | 1 cut(s) | 724 |
| PspXI | VCTCGAGB | 2 cut(s) | 620, 775 |
| PstI | CTGCAG | 3 cut(s) | 544, 1366, 1508 |
| PsuI | RGATCY | 4 cut(s) | 904, 1994, 2014, 2749 |
| PsyI | GACNNNGTC | 1 cut(s) | 2798 |
| RsaI | GTAC | 2 cut(s) | 1242, 2883 |
| RsaNI | GTAC | 2 cut(s) | 1241, 2882 |
| RseI | CAYNNNNRTG | 1 cut(s) | 49 |
| SacI | GAGCTC | 3 cut(s) | 358, 655, 1621 |
| SchI | GAGTC | 4 cut(s) | 52, 924, 1265, 1881 |
| SduI | GDGCHC | 7 cut(s) | 358, 621, 655, 678, 1621, 2219, 2578 |
| SfaNI | GCATC | 9 cut(s) | 474, 1441, 1618, 1707, 1747, 2105, 2329, 2571, 2806 |
| SfcI | CTRYAG | 5 cut(s) | 471, 540, 1362, 1504, 1821 |
| SfoI | GGCGCC | 2 cut(s) | 499, 2710 |
| Sfr274I | CTCGAG | 4 cut(s) | 620, 775, 1980, 2585 |
| SinI | GGWCC | 6 cut(s) | 724, 889, 1729, 1832, 2051, 2400 |
| SlaI | CTCGAG | 4 cut(s) | 620, 775, 1980, 2585 |
| SmaI | CCCGGG | 2 cut(s) | 485, 2000 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 49 |
| SmlI | CTYRAG | 5 cut(s) | 620, 775, 1980, 2504, 2585 |
| SmoI | CTYRAG | 5 cut(s) | 620, 775, 1980, 2504, 2585 |
| SspDI | GGCGCC | 2 cut(s) | 497, 2708 |
| SspMI | CTAG | 5 cut(s) | 648, 921, 1290, 1733, 1764 |
| SstI | GAGCTC | 3 cut(s) | 358, 655, 1621 |
| StyI | CCWWGG | 4 cut(s) | 1122, 1324, 2028, 2415 |
| TaaI | ACNGT | 8 cut(s) | 1267, 1344, 1708, 1825, 2130, 2254, 2491, 2800 |
| TaiI | ACGT | 4 cut(s) | 1114, 1480, 2390, 2738 |
| TaqI | TCGA | 7 cut(s) | 297, 621, 641, 776, 1981, 2586, 2808 |
| TaqII | GACCGA | 1 cut(s) | 1907 |
| TatI | WGTACW | 2 cut(s) | 1240, 2881 |
| TauI | GCSGC | 6 cut(s) | 141, 144, 147, 290, 629, 1535 |
| TfiI | GAWTC | 3 cut(s) | 37, 2533, 2660 |
| TscAI | CASTG | 8 cut(s) | 964, 1349, 1830, 1897, 2043, 2259, 2803, 2884 |
| TseFI | GTSAC | 4 cut(s) | 1196, 1674, 2181, 2792 |
| Tsp45I | GTSAC | 4 cut(s) | 1196, 1674, 2181, 2792 |
| TspGWI | ACGGA | 5 cut(s) | 19, 98, 323, 2365, 2742 |
| TspMI | CCCGGG | 2 cut(s) | 483, 1998 |
| TspRI | CASTG | 8 cut(s) | 964, 1349, 1830, 1897, 2043, 2259, 2803, 2884 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2798 |
| VpaK11BI | GGWCC | 6 cut(s) | 724, 889, 1729, 1832, 2051, 2400 |
| VspI | ATTAAT | 3 cut(s) | 1139, 1431, 2174 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1388, 1636 |
| XapI | RAATTY | 5 cut(s) | 70, 439, 1656, 1698, 2313 |
| XhoI | CTCGAG | 4 cut(s) | 620, 775, 1980, 2585 |
| XmaI | CCCGGG | 2 cut(s) | 483, 1998 |
| XmiI | GTMKAC | 2 cut(s) | 1474, 1663 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2766 |
| XspI | CTAG | 5 cut(s) | 648, 921, 1290, 1733, 1764 |
| ZraI | GACGTC | 1 cut(s) | 2388 |
| Zsp2I | ATGCAT | 1 cut(s) | 1722 |