Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015941

Physical Location & Seq

Genomic Coordinates Reverse (-)

22561849 .. 22564587

Gene Structure 2739 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G55740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGCTTCTCTTCCTTTCAACACTATCCCGAATAAAGTTCCATTTTCAGTATCATCGAAACCTTCTTCTAAACACCACGATGAACAAGCTCATTCTCCTTCTTCCACATCTTACTTTCATCGCGTTTCGTCTCTTTGTAAGAACGGTGAGATCAAAGAAGCTCTGAGTTTAGTTACAGAGATGGATTTCAGAAACTTACGCATTGGTCCTGAGATATACGGTGAAATCCTCCAAGGATGCGTTTACGAGAGAGATTTAAGTACAGGGAAGCAAATTCATGCTCGGATTTTAAAGAACGGTGATTTCTACGCGAGGAATGAGTACATCGAGACTAAATTGGTGATATTCTACGCCAAGTGCGATGCTTTGGAGATTGCTGAAGTTCTTTTCTCGAAATTGAGGGTTCGTAATGTTTTCTCTTGGGCAGCTATTATTGGTGTGAAATGTAGGATTGGGTTATGTGAAGGAGCTTTAATGGGTTTTGTTGAGATGCTTGAAAATGAGATTTTTCCTGATAATTTTGTGGTTCCGAATGTTTGTAAAGCGTGTGGTGCGTTGAAATGGAGTAGATTTGGGAGAGGGGTTCATGGGTATGTGGTAAAATCTGGTCTTGAGGATTGTGTGTTTGTGGCTAGTAGTTTAGCTGATATGTATGGGAAATGTGGTGTTTTGGATGATGCGAGTAAGGTGTTTGATGAAATTCCTGACAGAAATGCTGTTGCTTGGAATGCGTTGATGGTTGGTTATGTACAAAATGGTAAGAATGAGGAAGCGATTCGGCTTTTTTCTGATATGAGGAAGCAAGGTGTTGAGCCTACTCGTGTCACTGTCTCGACTTGCTTATCTGCTTCTGCTAATATGGGTGGGGTTGAAGAGGGGAAACAGTCGCATGCCATTGCTATTGTAAATGGAATGGAGCTGGATAATATCTTGGGGACATCTTTATTGAATTTCTATTGCAAAGTGGGTTTGATAGAGTATGCTGAGATGGTTTTTGATCGGATGTTTGAAAAGGATGTGGTTACATGGAATCTGATTATTTCTGGGTATGTTCAACAAGGGCTAGTTGAAGATGCTATCTACATGTGTCAATTAATGAGACTAGAGAAGCTGAAATATGATTGTGTCACTTTAGCGACATTAATGTCTGCTGCTGCACGTACTGAGAATCTAAAGCTCGGGAAAGAGGTGCAGTGTTATTGCATTAGACATAGTTTTGAATCTGATATCGTTTTAGCCAGCACTGTGATGGATATGTATGCCAAGTGTGGCAGCATTGTTGATGCTAAGAAAGTGTTTGATTCTACAGTAGAGAAAGACTTGATACTGTGGAATACGTTACTTGCAGCCTATGCAGAATCTGGTCTTAGTGGAGAGGCTTTGAGATTGTTCTATGGGATGCAGCTAGAAGGTGTACCTCCAAATGTGATAACATGGAATTTGATCATTCTAAGTCTTCTAAGGAATGGTCAGGTAGATGAGGCCAAGGATATGTTCTTGCAGATGCAATCCTCAGGGATAATTCCAAATCTTATCTCATGGACGACTATGATGAATGGTATGGTTCAAAATGGTTGCAGTGAGGAGGCAATTCTGTTTCTTAGAAAGATGCAAGAATCGGGCCTGAGACCAAATGCATTTAGCATCACTGTCGCTCTCTCTGCTTGCGCACATCTAGCATCATTGCATATCGGAAGAACAATCCACGGATACATCATAAGAAATCTACAGCATTCCTCTTTGGTTTCTATTGAAACTTCTTTGGTTGACATGTATGCTAAATGTGGAGATATAAACAAAGCAGAGAAGGTTTTCGGAAGTAAGCTATACAGCGAGTTGCCTCTCTCCAATGCCATGATCTCGGCGTATGCATTATATGGTAACTTAAAAGAAGCAATCGCTCTATACAGAAGCTTAGAAGGTGTAGGTCTTAAACCAGACAACATCACAATCACAAATGTCTTATCAGCATGTAACCACGCAGGGGATATTAACCAGGCTATCGAGATTTTCACTGATATCGTTTCAAAGCGTAGTATGAAACCATGCTTGGAACATTATGGACTTATGGTAGATCTTCTTGCATCAGCTGGAGAAACAGAAAAAGCTTTAAGGTTAATCGAGGAAATGCCATTCAAGCCAGATGCACGAATGATCCAATCTTTGGTTGCTTCTTGCAACAAACAGCGTAAGACTGAGCTTGTGGACTACTTATCAAGGAAATTGCTTGAATCCGAGCCTGAAAACTCCGGTAACTATGTGACGATATCGAATGCTTATGCGGTTGAAGGAAGTTGGGATGAAGTTGTGAAGATGAGAGAGATGATGAAAGCTAAGGGTTTGAAGAAAAAACCTGGATGTAGTTGGATACAGATTACAGGAGAAGAAGGAGTCCATGTGTTTGTTGCCAATGATAAGACACATACTAGGATCAATGAGATACAAATGATGTTAGCATTGTTATTATATGATATGGGTACAGGTTCCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

830

Amino Acids

92.14

Weight (kDa)

5.91

Isoelectric Point (pI)

37.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	238 - 284	1.5e-13	PPR repeat family
PPR_3	PF13812	238 - 283	5.7e-06	Pentatricopeptide repeat domain
PPR	PF01535	240 - 270	2e-07	PPR repeat
PPR_2	PF13041	338 - 386	1.8e-07	PPR repeat family
PPR_2	PF13041	440 - 478	6.9e-06	PPR repeat family
PPR_2	PF13041	474 - 520	5e-12	PPR repeat family
PPR	PF01535	477 - 507	4.5e-06	PPR repeat
PPR_2	PF13041	509 - 558	7.8e-10	PPR repeat family
PPR	PF01535	512 - 542	1.7e-06	PPR repeat
E_motif	PF20431	733 - 791	9.9e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55740
fragaria_vesca	FvH4_1g04140
malus_domestica	MD02G1039900.v1.1
prunus_persica	Prupe.7G235800_v2.0.a1
pyrus_communis	pycom02g03320
rosa_chinensis	RchiOBHm_Chr2g0089611
rosa_laevigata	RLG00000016045
rosa_multiflora	Rmu_sc0004662.1_g000003
rosa_roxburghii	Rroxscaffold_2G00151710
rosa_rugosa	Rorug02G0002100
rosa_samantha	Rh2AG047400 Rh2BG046100 Rh2CG048000 Rh2DG047500
rosa_wichuraiana	Rw2G003950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1144
Acc16I	TGCGCA	1 cut(s)	1669
AccB7I	CCANNNNNTGG	1 cut(s)	2164
AccII	CGCG	2 cut(s)	123, 311
AciI	CCGC	1 cut(s)	2282
AclWI	GGATC	2 cut(s)	2149, 2438
AcsI	RAATTY	4 cut(s)	273, 699, 949, 1438
AcuI	CTGAAG	1 cut(s)	399
AfaI	GTAC	6 cut(s)	262, 323, 750, 1162, 1416, 2479
AfiI	CCNNNNNNNGG	2 cut(s)	1984, 2164
AflIII	ACRYGT	2 cut(s)	1083, 1770
AjnI	CCWGG	2 cut(s)	1995, 2353
AjuI	GAANNNNNNNTTGG	4 cut(s)	1478, 1510, 2033, 2065
Alw26I	GTCTC	5 cut(s)	135, 323, 835, 1093, 1621
AlwI	GGATC	2 cut(s)	2149, 2438
AlwNI	CAGNNNCTG	1 cut(s)	1361
Ama87I	CYCGRG	1 cut(s)	1178
AoxI	GGCC	2 cut(s)	1482, 1621
ApeKI	GCWGC	6 cut(s)	425, 1151, 1154, 1272, 1346, 1402
ApoI	RAATTY	4 cut(s)	273, 699, 949, 1438
AseI	ATTAAT	2 cut(s)	1094, 1142
Asp700I	GAANNNNTTC	2 cut(s)	774, 1811
AspLEI	GCGC	1 cut(s)	1670
AspS9I	GGNCC	2 cut(s)	206, 1621
AsuHPI	GGTGA	4 cut(s)	158, 233, 311, 352
AvaI	CYCGRG	1 cut(s)	1178
AvaII	GGWCC	1 cut(s)	206
AxyI	CCTNAGG	1 cut(s)	1513
BauI	CACGAG	1 cut(s)	819
BbsI	GAAGAC	1 cut(s)	1448
BbvI	GCAGC	6 cut(s)	437, 1138, 1141, 1284, 1358, 1414
BccI	CCATC	4 cut(s)	175, 730, 982, 1243
BcgI	CGANNNNNNTGC	2 cut(s)	1633, 1667
BciT130I	CCWGG	2 cut(s)	1997, 2355
BciVI	GTATCC	2 cut(s)	1703, 2361
BclI	TGATCA	1 cut(s)	1443
BcoDI	GTCTC	5 cut(s)	135, 323, 835, 1093, 1621
BfaI	CTAG	6 cut(s)	633, 1064, 1103, 1406, 1676, 2427
BfmI	CTRYAG	2 cut(s)	1305, 1727
BfuI	GTATCC	2 cut(s)	1703, 2361
BglII	AGATCT	1 cut(s)	2074
BisI	GCNGC	6 cut(s)	426, 1152, 1155, 1273, 1347, 1403
BlsI	GCNGC	6 cut(s)	427, 1153, 1156, 1274, 1348, 1404
Bme1390I	CCNGG	2 cut(s)	1997, 2355
Bme18I	GGWCC	1 cut(s)	206
BmeT110I	CYCGRG	1 cut(s)	1178
BmgT120I	GGNCC	2 cut(s)	206, 1621
BmiI	GGNNCC	2 cut(s)	528, 2485
BmrFI	CCNGG	2 cut(s)	1997, 2355
BpiI	GAAGAC	1 cut(s)	1448
BpmI	CTGGAG	1 cut(s)	2112
Bpu10I	CCTNAGC	1 cut(s)	2334
BpuEI	CTTGAG	1 cut(s)	632
BsaAI	YACGTR	1 cut(s)	1160
BsaI	GGTCTC	1 cut(s)	1621
BsaJI	CCNNGG	3 cut(s)	232, 1485, 1705
BsaWI	WCCGGW	1 cut(s)	2249
BsaXI	ACNNNNNCTCC	2 cut(s)	2382, 2412
Bsc4I	CCNNNNNNNGG	2 cut(s)	1984, 2164
Bse21I	CCTNAGG	1 cut(s)	1513
Bse3DI	GCAATG	2 cut(s)	894, 1682
BseBI	CCWGG	2 cut(s)	1997, 2355
BseDI	CCNNGG	3 cut(s)	232, 1485, 1705
BseGI	GGATG	7 cut(s)	242, 679, 1008, 1021, 1404, 2305, 2363
BseLI	CCNNNNNNNGG	2 cut(s)	1984, 2164
BseMI	GCAATG	2 cut(s)	894, 1682
BseMII	CTCAG	7 cut(s)	155, 201, 975, 1155, 1527, 1616, 2187
BseRI	GAGGAG	1 cut(s)	1598
BseXI	GCAGC	6 cut(s)	437, 1138, 1141, 1284, 1358, 1414
BsgI	GTGCAG	2 cut(s)	1140, 1211
Bsh1236I	CGCG	2 cut(s)	123, 311
BshFI	GGCC	2 cut(s)	1484, 1623
BsiHKCI	CYCGRG	1 cut(s)	1178
BsiSI	CCGG	1 cut(s)	2250
BslFI	GGGAC	1 cut(s)	949
BslI	CCNNNNNNNGG	2 cut(s)	1984, 2164
BsmAI	GTCTC	5 cut(s)	135, 323, 835, 1093, 1621
BsmBI	CGTCTC	1 cut(s)	135
BsmFI	GGGAC	1 cut(s)	949
BsmI	GAATGC	3 cut(s)	733, 1732, 2278
BsnI	GGCC	2 cut(s)	1484, 1623
Bso31I	GGTCTC	1 cut(s)	1621
BsoBI	CYCGRG	1 cut(s)	1178
Bsp1407I	TGTACA	1 cut(s)	748
Bsp143I	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
BspACI	CCGC	1 cut(s)	2282
BspANI	GGCC	2 cut(s)	1484, 1623
BspCNI	CTCAG	7 cut(s)	156, 202, 976, 1156, 1526, 1617, 2188
BspFNI	CGCG	2 cut(s)	123, 311
BspLI	GGNNCC	2 cut(s)	528, 2485
BspPI	GGATC	2 cut(s)	2149, 2438
BspTNI	GGTCTC	1 cut(s)	1621
BsrDI	GCAATG	2 cut(s)	894, 1682
BsrGI	TGTACA	1 cut(s)	748
BssECI	CCNNGG	3 cut(s)	232, 1485, 1705
BssMI	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
BssSI	CACGAG	1 cut(s)	819
BssT1I	CCWWGG	2 cut(s)	232, 1485
Bst2BI	CACGAG	1 cut(s)	819
Bst2UI	CCWGG	2 cut(s)	1997, 2355
Bst4CI	ACNGT	9 cut(s)	146, 221, 299, 829, 885, 1246, 1309, 1329, 1651
Bst6I	CTCTTC	2 cut(s)	15, 867
BstAPI	GCANNNNNTGC	1 cut(s)	1352
BstAUI	TGTACA	1 cut(s)	748
BstBAI	YACGTR	1 cut(s)	1160
BstC8I	GCNNGC	3 cut(s)	891, 1240, 1666
BstDSI	CCRYGG	1 cut(s)	1705
BstF5I	GGATG	7 cut(s)	242, 679, 1008, 1021, 1404, 2305, 2363
BstFNI	CGCG	2 cut(s)	123, 311
BstHHI	GCGC	1 cut(s)	1670
BstKTI	GATC	7 cut(s)	153, 1000, 1446, 1860, 2077, 2157, 2433
BstMAI	GTCTC	5 cut(s)	135, 323, 835, 1093, 1621
BstMBI	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
BstMWI	GCNNNNNNNGC	6 cut(s)	551, 728, 1352, 1661, 1676, 2137
BstNI	CCWGG	2 cut(s)	1997, 2355
BstNSI	RCATGY	4 cut(s)	893, 1087, 1774, 1974
BstSCI	CCNGG	2 cut(s)	1995, 2353
BstSFI	CTRYAG	2 cut(s)	1305, 1727
BstUI	CGCG	2 cut(s)	123, 311
BstV1I	GCAGC	6 cut(s)	437, 1138, 1141, 1284, 1358, 1414
BstV2I	GAAGAC	1 cut(s)	1448
BstX2I	RGATCY	1 cut(s)	2074
BstYI	RGATCY	1 cut(s)	2074
Bsu36I	CCTNAGG	1 cut(s)	1513
BsuI	GTATCC	2 cut(s)	1703, 2361
BsuRI	GGCC	2 cut(s)	1484, 1623
BtgI	CCRYGG	1 cut(s)	1705
BtgZI	GCGATG	2 cut(s)	104, 375
BtsCI	GGATG	7 cut(s)	242, 679, 1008, 1021, 1404, 2305, 2363
BtsI	GCAGTG	2 cut(s)	1199, 1585
BtsIMutI	CAGTG	6 cut(s)	825, 1199, 1242, 1585, 1647, 2013
Cac8I	GCNNGC	3 cut(s)	891, 1240, 1666
CaiI	CAGNNNCTG	1 cut(s)	1361
CfoI	GCGC	1 cut(s)	1670
Cfr13I	GGNCC	2 cut(s)	206, 1621
Csp6I	GTAC	6 cut(s)	261, 322, 749, 1161, 1415, 2478
CviQI	GTAC	6 cut(s)	261, 322, 749, 1161, 1415, 2478
DpnI	GATC	7 cut(s)	152, 999, 1445, 1859, 2076, 2156, 2432
DpnII	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
DraI	TTTAAA	1 cut(s)	291
DrdI	GACNNNNNNGTC	1 cut(s)	1144
DseDI	GACNNNNNNGTC	1 cut(s)	1144
Eam1104I	CTCTTC	2 cut(s)	15, 867
EarI	CTCTTC	2 cut(s)	15, 867
Eco130I	CCWWGG	2 cut(s)	232, 1485
Eco31I	GGTCTC	1 cut(s)	1621
Eco32I	GATATC	3 cut(s)	1228, 2020, 2268
Eco47I	GGWCC	1 cut(s)	206
Eco57I	CTGAAG	1 cut(s)	399
Eco81I	CCTNAGG	1 cut(s)	1513
Eco88I	CYCGRG	1 cut(s)	1178
EcoRII	CCWGG	2 cut(s)	1995, 2353
EcoRV	GATATC	3 cut(s)	1228, 2020, 2268
EcoT14I	CCWWGG	2 cut(s)	232, 1485
EcoT22I	ATGCAT	2 cut(s)	1639, 1873
ErhI	CCWWGG	2 cut(s)	232, 1485
Esp3I	CGTCTC	1 cut(s)	135
FaqI	GGGAC	1 cut(s)	949
FbaI	TGATCA	1 cut(s)	1443
Fnu4HI	GCNGC	6 cut(s)	426, 1152, 1155, 1273, 1347, 1403
FokI	GGATG	7 cut(s)	249, 686, 1015, 1028, 1411, 2312, 2370
Fsp4HI	GCNGC	6 cut(s)	426, 1152, 1155, 1273, 1347, 1403
FspBI	CTAG	6 cut(s)	633, 1064, 1103, 1406, 1676, 2427
FspI	TGCGCA	1 cut(s)	1669
GlaI	GCGC	1 cut(s)	1669
GluI	GCNGC	6 cut(s)	426, 1152, 1155, 1273, 1347, 1403
GsuI	CTGGAG	1 cut(s)	2112
HaeIII	GGCC	2 cut(s)	1484, 1623
HapII	CCGG	1 cut(s)	2250
HhaI	GCGC	1 cut(s)	1670
Hin6I	GCGC	1 cut(s)	1668
HinP1I	GCGC	1 cut(s)	1668
HincII	GTYRAC	1 cut(s)	1768
HindII	GTYRAC	1 cut(s)	1768
HindIII	AAGCTT	2 cut(s)	1912, 2106
HinfI	GANTC	9 cut(s)	775, 1030, 1168, 1220, 1301, 1358, 1616, 2231, 2391
HpaII	CCGG	1 cut(s)	2250
HphI	GGTGA	4 cut(s)	158, 233, 311, 352
Hpy166II	GTNNAC	4 cut(s)	244, 1415, 1768, 2206
Hpy8I	GTNNAC	4 cut(s)	244, 1415, 1768, 2206
HpyAV	CCTTC	8 cut(s)	72, 108, 458, 1403, 1801, 1913, 2282, 2381
HpyCH4III	ACNGT	9 cut(s)	146, 221, 299, 829, 885, 1246, 1309, 1329, 1651
HpyCH4IV	ACGT	2 cut(s)	1159, 1337
HpyF10VI	GCNNNNNNNGC	6 cut(s)	551, 728, 1352, 1661, 1676, 2137
HpySE526I	ACGT	2 cut(s)	1159, 1337
HspAI	GCGC	1 cut(s)	1668
Ksp22I	TGATCA	1 cut(s)	1443
Kzo9I	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
LmnI	GCTCC	2 cut(s)	467, 916
Lsp1109I	GCAGC	6 cut(s)	437, 1138, 1141, 1284, 1358, 1414
MaeI	CTAG	6 cut(s)	633, 1064, 1103, 1406, 1676, 2427
MaeII	ACGT	2 cut(s)	1159, 1337
MaeIII	GTNAC	9 cut(s)	172, 823, 1021, 1126, 1338, 1880, 1973, 2252, 2260
MalI	GATC	7 cut(s)	152, 999, 1445, 1859, 2076, 2156, 2432
MboI	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
MflI	RGATCY	1 cut(s)	2074
MlyI	GAGTC	1 cut(s)	2400
MmeI	TCCRAC	1 cut(s)	2345
Mph1103I	ATGCAT	2 cut(s)	1639, 1873
MroXI	GAANNNNTTC	2 cut(s)	774, 1811
MslI	CAYNNNNRTG	3 cut(s)	78, 591, 1247
MspA1I	CMGCKG	1 cut(s)	2090
MspI	CCGG	1 cut(s)	2250
MspR9I	CCNGG	2 cut(s)	1997, 2355
Mva1269I	GAATGC	3 cut(s)	733, 1732, 2278
MvaI	CCWGG	2 cut(s)	1997, 2355
MvnI	CGCG	2 cut(s)	123, 311
MwoI	GCNNNNNNNGC	6 cut(s)	551, 728, 1352, 1661, 1676, 2137
NdeII	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
NlaIV	GGNNCC	2 cut(s)	528, 2485
NmeAIII	GCCGAG	1 cut(s)	1841
NmuCI	GTSAC	3 cut(s)	823, 1126, 2260
NsbI	TGCGCA	1 cut(s)	1669
NsiI	ATGCAT	2 cut(s)	1639, 1873
NspI	RCATGY	4 cut(s)	893, 1087, 1774, 1974
PaeI	GCATGC	1 cut(s)	893
PciI	ACATGT	2 cut(s)	1083, 1770
PcsI	WCGNNNNNNNCGW	1 cut(s)	357
PctI	GAATGC	3 cut(s)	733, 1732, 2278
PdmI	GAANNNNTTC	2 cut(s)	774, 1811
PfeI	GAWTC	8 cut(s)	775, 1030, 1168, 1220, 1301, 1358, 1616, 2231
PflMI	CCANNNNNTGG	1 cut(s)	2164
PkrI	GCNGC	6 cut(s)	427, 1153, 1156, 1274, 1348, 1404
PleI	GAGTC	1 cut(s)	2399
PpsI	GAGTC	1 cut(s)	2399
Ppu21I	YACGTR	1 cut(s)	1160
PscI	ACATGT	2 cut(s)	1083, 1770
PshBI	ATTAAT	2 cut(s)	1094, 1142
Psp6I	CCWGG	2 cut(s)	1995, 2353
PspGI	CCWGG	2 cut(s)	1995, 2353
PspN4I	GGNNCC	2 cut(s)	528, 2485
PspPI	GGNCC	2 cut(s)	206, 1621
PstNI	CAGNNNCTG	1 cut(s)	1361
PsuI	RGATCY	1 cut(s)	2074
PvuII	CAGCTG	1 cut(s)	2090
RsaI	GTAC	6 cut(s)	262, 323, 750, 1162, 1416, 2479
RsaNI	GTAC	6 cut(s)	261, 322, 749, 1161, 1415, 2478
RseI	CAYNNNNRTG	3 cut(s)	78, 591, 1247
SatI	GCNGC	6 cut(s)	426, 1152, 1155, 1273, 1347, 1403
Sau3AI	GATC	7 cut(s)	150, 997, 1443, 1857, 2074, 2154, 2430
Sau96I	GGNCC	2 cut(s)	206, 1621
SchI	GAGTC	1 cut(s)	2400
ScrFI	CCNGG	2 cut(s)	1997, 2355
SfcI	CTRYAG	2 cut(s)	1305, 1727
SinI	GGWCC	1 cut(s)	206
SmiMI	CAYNNNNRTG	3 cut(s)	78, 591, 1247
SmlI	CTYRAG	1 cut(s)	611
SmoI	CTYRAG	1 cut(s)	611
SphI	GCATGC	1 cut(s)	893
SsiI	CCGC	1 cut(s)	2282
SspMI	CTAG	6 cut(s)	633, 1064, 1103, 1406, 1676, 2427
StyD4I	CCNGG	2 cut(s)	1995, 2353
StyI	CCWWGG	2 cut(s)	232, 1485
TaaI	ACNGT	9 cut(s)	146, 221, 299, 829, 885, 1246, 1309, 1329, 1651
TaiI	ACGT	2 cut(s)	1162, 1340
TaqI	TCGA	7 cut(s)	56, 327, 392, 833, 2004, 2121, 2270
TatI	WGTACW	3 cut(s)	260, 321, 748
TfiI	GAWTC	8 cut(s)	775, 1030, 1168, 1220, 1301, 1358, 1616, 2231
TscAI	CASTG	6 cut(s)	832, 1199, 1249, 1585, 1654, 2020
TseFI	GTSAC	3 cut(s)	823, 1126, 2260
TseI	GCWGC	6 cut(s)	425, 1151, 1154, 1272, 1346, 1402
Tsp45I	GTSAC	3 cut(s)	823, 1126, 2260
TspDTI	ATGAA	9 cut(s)	96, 107, 266, 575, 711, 1568, 2054, 2316, 2342
TspGWI	ACGGA	1 cut(s)	1722
TspRI	CASTG	6 cut(s)	832, 1199, 1249, 1585, 1654, 2020
Van91I	CCANNNNNTGG	1 cut(s)	2164
VpaK11BI	GGWCC	1 cut(s)	206
VspI	ATTAAT	2 cut(s)	1094, 1142
XapI	RAATTY	4 cut(s)	273, 699, 949, 1438
XceI	RCATGY	4 cut(s)	893, 1087, 1774, 1974
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1246
XmnI	GAANNNNTTC	2 cut(s)	774, 1811
XspI	CTAG	6 cut(s)	633, 1064, 1103, 1406, 1676, 2427
Zsp2I	ATGCAT	2 cut(s)	1639, 1873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.